Citrus Sinensis ID: 005110

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710----
Protein Sequence
MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHccccHHHHHccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccEEEEccccccccccccEEEccccccccccccccHHHHHHHHcccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHccHHHHHHHHHHHHHHHHHHccccccccccccccccHHEEcccHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEcEEEEEEccccccccccccEEEEEEEcccccccccccEEEcccccEEEEcccccccEEEEEEEEEccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEcccccccccccEEEEEEcccccccEEEHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccHHHHcccccccHHHccEEEEEEcccccccccEEEEEccccccccccccccHHHHHHHHccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEcccEEEEEEEccccccccccEEEEEEEcccccccccccEEEEccccEEEEEccccccEEEEEEEEEccccccccEEEEEEcccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccHcccccccccccHHcccccccccccccccccccHHcccccccccccccHccccccccccccEEEEccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccHHHHHcc
Coil and Loop (DISEMBL)
MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGkerkytglTKLKIIENLLKLVSEKksgereaktdiepqsspassqrpskrqrkndnparlpvpvtdaamnnsgsdLVNAIYCKNSACRATLRKEdvfckrcsccicrkyddnkdpslwltcsseppfggdscgmschLECALknersgigkdrcysgldgsfyciscRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEdevgpltglpvkmgrgivnrlssgpEVQKLCACAVESLDKMIsntilpnpsvqgsnvivpnmvkfeDVRATSLTVVlgsedpspgniiSYTLWHrrahegfparptctlfapntrfvvtglcpateyQFKVvssngttelgrceiwfstgssrdevtncsviersqspatncsslsnpssvedetnnvtpdrdpndaqvnnyytysketdkiastnlcddaidctvlgrgttpadaVSLLDeerannidgsmpdshvqkleskhppegriieemstdngvdtpvptgmecvpymrsleaglpitpckIEILKDAQarngrsklnskdmengtgnrdepqdgstskkrssesrdedctanglsdmdfEHCVKVIRWLECEGHIERNFRQKFLtwyslratpqeVRIVKVFVDTFVEDPASLAEQLMDTFSDcissrrssvvpagfcmklwh
Flexible Loop (DISEMBL)
MEEKRELVYQlskqshsasetlrswtrQEILQILCAElgkerkytgltkLKIIENLLKLVsekksgereaktdiepqsspassqrpskrqrkndnparlpvpvtdaamnnsGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICrkyddnkdpsLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLvvakntrrvDILCyrlslgqklvnatekyknLSKIVDDAVKMLEDEVGpltglpvkmGRGIVNRLSSGPEVQKLCACAVESLDKMISNTilpnpsvqgsnVIVPNMVKFEDVRATSLTvvlgsedpspgNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKvvssngttelGRCEIWfstgssrdevTNCSVIersqspatncsslsnpssvedetnnvtpdrdpndaqVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANnidgsmpdshvqkLESKHPPEGRIIEemstdngvdtpvPTGMECVPYMRSLEAGLPITPCKIEILKDAqarngrsklnskdmengtgnrdepqdgstskkrssesrdedctanglsdmdfEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCissrrssvvpagfcmklwh
Low Complexity Region (SEG)
MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIEpqsspassqrpskrqrkNDNPARLPVPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH
Disordered region (IsUnstruct)
**********************RSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV*****************************************************DLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTG*************************************************NNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTP****************************************************TGMECVPYMRSLEAGLPITPCKIEILK************************************************LSDMDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLW*
Disordered Region (DISOPRED)
**EKRELVYQLSK**********SWTRQEILQILCAELGKERKYTGLTKLKIIENLLK********************************************************LVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKN*************LDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLD*********************NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGR******************************************************************************************************************************************************************************************************************************DFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH
Disordered Region (DISEMBL)
**********************RSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLVSEK********************************PARLPVPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQ***********************PDRDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDME****************************ANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH
Disordered Region (DISPRO)
MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLVSE***************************************************DLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISNT**********NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSS******************************************************************************************************SH*Q*****HP**GRIIEEMS**************************************************************************************SDMDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFC*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	714	2.2.26 [Sep-21-2011]
Q9FIE3	620	Protein VERNALIZATION INS	no	no	0.554	0.638	0.474	1e-102
Q84TI3	1162	Protein OBERON 4 OS=Arabi	no	no	0.211	0.129	0.232	2e-07
Q84N38	549	OBERON-like protein OS=Ni	N/A	no	0.128	0.167	0.292	0.0003
Q94B71	733	Protein OBERON 3 OS=Arabi	no	no	0.198	0.193	0.236	0.0004

>sp|Q9FIE3|VIN3_ARATH Protein VERNALIZATION INSENSITIVE 3 OS=Arabidopsis thaliana GN=VIN3 PE=2 SV=2

 Score =  372 bits (955), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 218/459 (47%), Positives = 283/459 (61%), Gaps = 63/459 (13%)

Query: 1   MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV 60
           + E+REL++ LS Q   ASE L SW+R EI++I+CAE+GKERKYTGL K K+IENLL LV
Sbjct: 42  VSERRELIHALSNQPEEASELLNSWSRNEIMKIICAEMGKERKYTGLNKPKLIENLLNLV 101

Query: 61  SEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIY 120
           S              P    + S R + R+++      +                   I 
Sbjct: 102 S-------------RPLGETSCSDRRNSRKKEKKMIGYI-------------------IC 129

Query: 121 CKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA 180
           C+N ACRA L  +D FC+RCSCCIC+K+DDNKDPSLWLTC        D+CG SCHLEC 
Sbjct: 130 CENLACRAALGCDDTFCRRCSCCICQKFDDNKDPSLWLTC--------DACGSSCHLECG 181

Query: 181 LKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQ 240
           LK +R GIG D     LDG FYC  C K NDLLGCW+KQ+ VAK TRRVD+LCYRLSLGQ
Sbjct: 182 LKQDRYGIGSD----DLDGRFYCAYCGKDNDLLGCWRKQVKVAKETRRVDVLCYRLSLGQ 237

Query: 241 KLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVE 300
           KL+  T KY+NL +++D+AVK LE +VGPL+G  +KM RGIVNRLSSG  VQKLC+ A+E
Sbjct: 238 KLLRGTTKYRNLLELMDEAVKKLEGDVGPLSGWAMKMARGIVNRLSSGVHVQKLCSQAME 297

Query: 301 SLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSP---GNIISYTLW 357
           +LDK++S    P+ SV G    +   V+ E+++A S+TV + SE+PS      I  + L+
Sbjct: 298 ALDKVVS----PSESVSGQGDKMT--VRVEEIQARSVTVRVDSEEPSSSTQNKITGFRLF 351

Query: 358 HRRAH-EGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFST-GS 415
            R++  E   ++  C ++ P T   + GL P TE+  +VVS N   +L   E+ F+T   
Sbjct: 352 CRKSKDEECSSQGNCVVYLPETTSAIQGLEPDTEFCLRVVSFNEEGDLDESELRFTTLKD 411

Query: 416 SRDEVTNCSVIERSQSPATNCSS--LSNPSSVEDETNNV 452
             DE  +       QSP TN SS   SNPS  EDE+NNV
Sbjct: 412 DGDEAGD------QQSPLTNSSSGLCSNPSLPEDESNNV 444

Plays a central role in vernalization by mediating the initial transcriptional repression of the homeotic gene FLC, a floral repressor, after a cold treatment. However, due to its transient expression, it can not maintain repression of FLC, which is then maintained by Polycomb Group complexes containing VRN2 throughout development. Required to deacetylate histones on the FLC promoter.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84TI3|OBE4_ARATH Protein OBERON 4 OS=Arabidopsis thaliana GN=OBE4 PE=1 SV=2

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 25/176 (14%)

Query: 113 SDLVNAIYCKNSACRATL----------RKEDVFCKRCSCCICRKYDDNKDPSLWLTCSS 162
           +++   + CKN +CR  L           ++D FC  C C +C  +D   +   W+ C  
Sbjct: 799 AEIFMNMRCKNLSCRVLLPVDECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGC-- 856

Query: 163 EPPFGGDSCGMSCHLECALKNE--RSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQL 220
                 D C   CH +C +K    R+GI         +  F+C++C   +++ G  K+  
Sbjct: 857 ------DVCLHWCHTDCGIKESYIRNGINASGAPGMTEMQFHCVACNHPSEMFGFVKEVF 910

Query: 221 VVAKNTRRVDILCYRLSLGQKLVNATE--KYKNLSKIVDDAVKMLEDEVGPLTGLP 274
           +      + +  C  L    K+ ++++  + K L +  D    ML      L GLP
Sbjct: 911 LNFAREWKFERFCKELEYVNKIFSSSKDSRGKQLRQAAD---AMLASLKSKLIGLP 963

Arabidopsis thaliana (taxid: 3702)

>sp|Q84N38|PVIP_NICBE OBERON-like protein OS=Nicotiana benthamiana GN=PVIP PE=1 SV=1

 Score = 48.1 bits (113), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 21/113 (18%)

Query: 121 CKNSACRATL----------RKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDS 170
           C+N AC + L           K++ FC  C C IC K+D   +   W+ C        D 
Sbjct: 196 CRNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGC--------DL 247

Query: 171 CGMSCHLECALKNERSGIGKD--RCYSGLDGSFYCISCRKVNDLLGCWKKQLV 221
           C    H +CA+ N + G G       S  +  F C +C + ++LLG W K + 
Sbjct: 248 CSHWTHTDCAISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLG-WVKDVF 299

Required for the maintenance and/or establishment of both the shoot and root meristems, probably by controlling the expression of the meristem genes and of genes required for auxin responses. Involved in the development of the basal pole and in auxin-mediated root and vascular development in the embryo (By similarity). Confers sensitivity to turnip mosaic virus (TuMV) probably by promoting viral movement and multiplication via interaction with TuMV VPg.

Nicotiana benthamiana (taxid: 4100)

>sp|Q94B71|OBE3_ARATH Protein OBERON 3 OS=Arabidopsis thaliana GN=OBE3 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 27/169 (15%)

Query: 119 IYCKNSACRATLRKEDV----------FCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGG 168
           + C+N  C++ L  +D           FC  C C +C ++D   +   W+ C        
Sbjct: 406 LRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGC-------- 457

Query: 169 DSCGMSCHLECALKNERSGIGKDRCYSGLDGS----FYCISCRKVNDLLGCWKKQLVVAK 224
           D C   CH  C +  +++ I       G  G+    F+CI C   +++ G  K   V   
Sbjct: 458 DVCSHWCHAACGI--QKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCA 515

Query: 225 NTRRVDILCYRLSLGQKLVNATE--KYKNLSKIVDDAVKMLED-EVGPL 270
               ++ L   L   +K+   ++  K K L    ++ VK LE  ++ PL
Sbjct: 516 KNWGLETLIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPL 564

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	714
255580419	710	conserved hypothetical protein [Ricinus	0.984	0.990	0.668	0.0
356562279	737	PREDICTED: protein VERNALIZATION INSENSI	0.997	0.966	0.655	0.0
356546032	736	PREDICTED: protein VERNALIZATION INSENSI	0.995	0.966	0.657	0.0
225446034	738	PREDICTED: protein VERNALIZATION INSENSI	0.995	0.963	0.653	0.0
357479623	730	Protein VERNALIZATION INSENSITIVE [Medic	0.987	0.965	0.630	0.0
449457169	737	PREDICTED: protein VERNALIZATION INSENSI	0.997	0.966	0.591	0.0
224126067	679	predicted protein [Populus trichocarpa]	0.928	0.976	0.631	0.0
297735403	652	unnamed protein product [Vitis vinifera]	0.880	0.964	0.604	0.0
449507054	734	PREDICTED: protein VERNALIZATION INSENSI	0.992	0.965	0.590	0.0
380710177	739	vernalization insensitive 3 [Solanum lyc	0.995	0.962	0.570	0.0

>gi|255580419|ref|XP_002531036.1| conserved hypothetical protein [Ricinus communis] gi|223529389|gb|EEF31353.1| conserved hypothetical protein [Ricinus communis]

 Score =  961 bits (2483), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/721 (66%), Positives = 573/721 (79%), Gaps = 18/721 (2%)

Query: 1   MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV 60
           M+EKRELVYQLSK S  ASE L+SW+RQEILQILC E+GKERKYTGLTKLKIIE+LLK+V
Sbjct: 1   MDEKRELVYQLSKCS-GASEMLQSWSRQEILQILCVEMGKERKYTGLTKLKIIEHLLKIV 59

Query: 61  SEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIY 120
           SEKK+GE E  TD E +SSPAS +R SKRQRK DNP+RL VPV   A +N+G+DL N IY
Sbjct: 60  SEKKAGECEVTTDAETESSPASVRRSSKRQRKIDNPSRLTVPVNYTATSNAGNDLANVIY 119

Query: 121 CKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA 180
           CKNSACRATL+++D FCKRCSCCIC KYDDNKDPSLWLTCSS+PPF   +CGMSCHL+CA
Sbjct: 120 CKNSACRATLKQDDAFCKRCSCCICYKYDDNKDPSLWLTCSSDPPFQAVTCGMSCHLDCA 179

Query: 181 LKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQ 240
           LK+E SGIGKD    G DGSF CI+C KVNDLLGCW+KQL++AK+TRRVDILCYRLSL Q
Sbjct: 180 LKHESSGIGKD----GYDGSFRCIACWKVNDLLGCWRKQLLMAKDTRRVDILCYRLSLSQ 235

Query: 241 KLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVE 300
           KL++ + KY+NL +IVD+AVK LEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCA A+E
Sbjct: 236 KLISRSGKYQNLYEIVDEAVKKLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCAFALE 295

Query: 301 SLDKMISNTI---LPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLW 357
           SLDK++S+T       P +   N+    +V+ EDV +TSLTVVLGSED S   ++ YTLW
Sbjct: 296 SLDKLLSSTTAHSFSAPVITDLNLTASTIVRIEDVNSTSLTVVLGSEDTSLDTVVGYTLW 355

Query: 358 HRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT-TELGRCEIWFSTGS 415
           HR+  + G+PA PTCTLF PNTRFVVTGLC AT+Y FK VS N    E+G CE+   T  
Sbjct: 356 HRKTRDTGYPAEPTCTLFVPNTRFVVTGLCSATDYHFKAVSFNDERREMGTCEVRCCT-- 413

Query: 416 SRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDK 475
            +DEV NCS +ERSQSPATNCSSLSNPSSVEDETN+  P  D    +  NY +Y K+ +K
Sbjct: 414 -QDEVPNCSAVERSQSPATNCSSLSNPSSVEDETNHNAPCGDQTVNRAYNYPSYCKDGNK 472

Query: 476 IASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRII 535
           I S+N+ +  I C  +G G T  +AV LLDEE    +  SMP   +QKL+++H  E +I+
Sbjct: 473 IVSSNVLNGIISCAGMGEGRTLTNAVPLLDEEHTVQVVTSMPCCDMQKLQNEHSHEDQIV 532

Query: 536 EEMSTDNGVDTPVPTGMECVPY--MRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDME 593
           +E ST+NG D P+ T +ECVP+    ++E  LPITPCK++++KD Q R+GRSK ++KD+ 
Sbjct: 533 DETSTENGSDAPIHTDLECVPFEGKGNIETSLPITPCKLDMIKDGQGRHGRSKSSNKDLL 592

Query: 594 NGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQK 653
           NGTG  +EPQD STSKKRS E RDE+CT    SD DFE+ VKVIR LECEGHIE+NFRQK
Sbjct: 593 NGTGKGEEPQDASTSKKRSGERRDEECTH---SDRDFEYYVKVIRLLECEGHIEKNFRQK 649

Query: 654 FLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLW 713
           FLTWYSLRATPQEVR+VK FVDTF++DPASLAEQL+DTFS+CISSRRSSVVPAGFCMKLW
Sbjct: 650 FLTWYSLRATPQEVRVVKAFVDTFIQDPASLAEQLVDTFSECISSRRSSVVPAGFCMKLW 709

Query: 714 H 714
           H
Sbjct: 710 H 710

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562279|ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]

 Score =  960 bits (2481), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/718 (65%), Positives = 563/718 (78%), Gaps = 6/718 (0%)

Query: 1   MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV 60
           MEEKRELVY++SK SH ASE L+SW+RQEILQILCAE+GKERKYTGLTKLKIIENLLK+V
Sbjct: 22  MEEKRELVYEVSKWSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIV 81

Query: 61  SEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIY 120
           SEKKSG  E  TD EPQSSPA  Q+P+KRQRK++NP+ +PVP T   +NN G D VN  Y
Sbjct: 82  SEKKSGGNETATDPEPQSSPAPGQKPAKRQRKSENPSHVPVPATSITVNNGG-DSVNTAY 140

Query: 121 CKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA 180
           CKNSAC+ATL +   FCKRCSCCIC +YDDNKDPSLWL CSSE PF G SCG+SCHLECA
Sbjct: 141 CKNSACKATLNQSYAFCKRCSCCICHQYDDNKDPSLWLICSSENPFPGVSCGLSCHLECA 200

Query: 181 LKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQ 240
           LK++ SGI KD  +  LDG FYC+SC KVNDLLGCW+KQL+VAK+TRRVDILCYR+SL Q
Sbjct: 201 LKHDGSGIAKDGEHPKLDGGFYCVSCGKVNDLLGCWRKQLMVAKDTRRVDILCYRVSLSQ 260

Query: 241 KLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVE 300
           +L+  TE Y+ L KIVD+AVK LE EVGPL G PVK+GRGIVNRLSSGPEVQKLC  A+E
Sbjct: 261 RLLQGTEVYEELYKIVDEAVKKLEPEVGPLIGSPVKIGRGIVNRLSSGPEVQKLCGFALE 320

Query: 301 SLDKMISNTILPN---PSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLW 357
           SLD ++S  ILP+   P+ Q ++++ PNMV+FEDV AT+LT++LGSE+PS   I  YTLW
Sbjct: 321 SLDSLLSKRILPSSPKPTTQDAHLLAPNMVRFEDVTATTLTIILGSEEPSGEIIAGYTLW 380

Query: 358 HRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSS 416
           HR+  +  +P  PTCT   PN RF V+GL P TEY FKVVS N   E G CE+  ST   
Sbjct: 381 HRKVDDVDYPTDPTCTSLLPNRRFRVSGLIPGTEYSFKVVS-NDLRESGMCEVQVSTEHG 439

Query: 417 RDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKI 476
            +EV NCS  ERSQSP TNCSSLSNPSSVEDETNN  P  D  D + ++Y +Y K+++++
Sbjct: 440 EEEVPNCSATERSQSPVTNCSSLSNPSSVEDETNNCNPYSDLTDNRADHYPSYHKDSNQL 499

Query: 477 ASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIE 536
           AS NL +D I+C+ LG    P DA SL D++ A     S+P S V KLE+KH PE ++ E
Sbjct: 500 ASGNLSNDVINCSNLGSVGLPPDADSLSDKQHAGGTTASIPSSDVLKLENKHSPEEQVTE 559

Query: 537 EMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENGT 596
           +MSTD+G+++P  TG ECVP + S + GLP TPCK+E LKD   +N RSK + KD EN +
Sbjct: 560 DMSTDDGLNSPALTGRECVPLVGSSKGGLPNTPCKLETLKDGPGKNKRSKSSGKDQENVS 619

Query: 597 GNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFLT 656
           G R+ PQDGSTSKKRS E ++E   ANG SD DFE+ VKVIRWLECEGHIE+NFRQKFLT
Sbjct: 620 GKREGPQDGSTSKKRSGERQEEGRVANGFSDRDFEYYVKVIRWLECEGHIEKNFRQKFLT 679

Query: 657 WYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH 714
           WYSLRAT QEVRIVK+++DTF+EDPASLAEQL+DTFS+CISS+R+SVVPAGFCMKLWH
Sbjct: 680 WYSLRATSQEVRIVKIYIDTFLEDPASLAEQLVDTFSECISSKRTSVVPAGFCMKLWH 737

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546032|ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]

 Score =  958 bits (2477), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/718 (65%), Positives = 562/718 (78%), Gaps = 7/718 (0%)

Query: 1   MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV 60
           MEEKRELVY++S  SH ASE L+SW+RQEILQILCAE+GKERKYTGLTKLKIIENLLK+V
Sbjct: 22  MEEKRELVYEVSNWSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIV 81

Query: 61  SEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIY 120
           SEKKSG  E  TD EPQSSPA  Q+P+KRQRK++NP+ +PVP T   +NN G D +N  +
Sbjct: 82  SEKKSGGNETATDPEPQSSPAPGQKPAKRQRKSENPSHIPVPATSVPVNNGG-DSINTTF 140

Query: 121 CKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA 180
           CKNSAC+ATL + D FCKRCSCCIC +YDDNKDPSLWL CSSE PF G SCG+SCHLECA
Sbjct: 141 CKNSACKATLNQSDAFCKRCSCCICHQYDDNKDPSLWLICSSENPFPGVSCGLSCHLECA 200

Query: 181 LKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQ 240
           LK++ SGIGKD     LDG FYC+SC K+NDLLGCW+KQL+VAK+TRRVDILCYR+SL Q
Sbjct: 201 LKHDGSGIGKDGERPKLDGGFYCVSCWKINDLLGCWRKQLMVAKDTRRVDILCYRVSLSQ 260

Query: 241 KLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVE 300
           +L+  TE Y+ L KIVD+AVK LE EVGPLTG PVK+GRGIVNRLSSGPEVQKLC  A+E
Sbjct: 261 RLLQGTEMYEELYKIVDEAVKKLEPEVGPLTGSPVKIGRGIVNRLSSGPEVQKLCGFALE 320

Query: 301 SLDKMISNTILP---NPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLW 357
           SLD + S  ILP    P+ Q + ++ PNM++FEDV AT+LT++LGSE+PS   +  YTLW
Sbjct: 321 SLDSL-SKRILPLSPKPTNQDAYLLAPNMLRFEDVTATTLTIILGSEEPSGEILAGYTLW 379

Query: 358 HRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSS 416
           HR+  +  +P  PTCT   PN RF V+GL P TEY FKVVS N   E G CE+  ST   
Sbjct: 380 HRKVDDVDYPMDPTCTSLLPNRRFSVSGLIPGTEYSFKVVS-NDLRESGMCEVQVSTEHG 438

Query: 417 RDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKI 476
            +EV NCS  ERSQSP TNCSSLSNPSSVEDETNN  P  D  D + ++Y +Y K+++K+
Sbjct: 439 EEEVPNCSATERSQSPVTNCSSLSNPSSVEDETNNCNPYSDLTDNRADHYPSYHKDSNKL 498

Query: 477 ASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIE 536
           AS NL +DAI+C+ LG    P DA SL D++ A     S+P S V KLE+KH PE +I E
Sbjct: 499 ASGNLSNDAINCSNLGGAGLPPDADSLSDKQHAGGTTASIPSSDVLKLENKHSPEEQITE 558

Query: 537 EMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENGT 596
           +MSTD+G+ +P  TG ECVP + S E GLP TPCK+E LKD   +N RSK + KD EN +
Sbjct: 559 DMSTDDGLISPALTGRECVPLVGSSEGGLPNTPCKLETLKDGPGKNKRSKSSGKDQENVS 618

Query: 597 GNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFLT 656
           G R+ PQDGSTSKKRS E ++E   ANG SD DFE+ VKVIRWLECEGHIE+NFRQKFLT
Sbjct: 619 GKREGPQDGSTSKKRSGERQEEGRVANGFSDRDFEYYVKVIRWLECEGHIEKNFRQKFLT 678

Query: 657 WYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH 714
           WYSLRATPQEVRIVK+++DTF+EDPASLAEQL+DTFS+C+SS+R+SVVPAGFCMKLWH
Sbjct: 679 WYSLRATPQEVRIVKIYIDTFLEDPASLAEQLVDTFSECLSSKRTSVVPAGFCMKLWH 736

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446034|ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis vinifera]

 Score =  943 bits (2437), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/722 (65%), Positives = 568/722 (78%), Gaps = 11/722 (1%)

Query: 1   MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV 60
           MEEKRELVY +SK S    E L+SW+RQEILQILCAE+GKERKYTGLTKLKIIE+LL++V
Sbjct: 20  MEEKRELVYAVSKWSRGGPEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIEHLLRVV 79

Query: 61  SEKKSGEREAKTDIE----PQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLV 116
           SEK S E+E  T+ E     Q S A++QR SKRQRK D+P+RLPV   + +++N   DL 
Sbjct: 80  SEKNSVEQEVVTNHEINHESQPSAATNQRTSKRQRKADHPSRLPVAANNHSISNGDGDLG 139

Query: 117 NAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCH 176
           NAIYCKN ACRA L +E  FCKRCSCCIC +YDDNKDPSLWLTCSS+PPF G SCGMSCH
Sbjct: 140 NAIYCKNLACRANLSREYEFCKRCSCCICHQYDDNKDPSLWLTCSSDPPFQGVSCGMSCH 199

Query: 177 LECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRL 236
           LECA K+E+SGI KD  +  LDGSFYC+SC KVND+LGCW+KQL++AK TRRVDILCYR+
Sbjct: 200 LECAFKHEKSGIAKDGRHVRLDGSFYCVSCGKVNDMLGCWRKQLMMAKETRRVDILCYRV 259

Query: 237 SLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCA 296
           SL QKL+N T+KY+ L +IV++AVK LE EVGPLTGLPVK  RGIVNRLSSGPEVQ+LCA
Sbjct: 260 SLSQKLLNGTKKYQKLYEIVEEAVKKLEAEVGPLTGLPVKTARGIVNRLSSGPEVQRLCA 319

Query: 297 CAVESLDKMISNTI---LPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIIS 353
            A+ESLD ++SN+     P P +Q + ++ P+ ++FEDV +TSLTV+LGSED S  N+IS
Sbjct: 320 LALESLDSVLSNSHPRPAPGPKIQDAGLVAPS-IRFEDVCSTSLTVILGSEDSSTDNVIS 378

Query: 354 YTLWHRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFS 412
           Y LWHR++++  +PA P CT+ APN RF  + L P+TEY FKVVS   T ELG  E+ FS
Sbjct: 379 YKLWHRKSNDLEYPAEPACTMLAPNKRFTFSDLTPSTEYVFKVVSFQDTRELGMGEVQFS 438

Query: 413 TGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKE 472
           T SS D++    V ERSQSPATNCSSLSNPSSVEDETNNVTP  D N+ + +NY  Y K 
Sbjct: 439 TSSSGDDIPKSLVAERSQSPATNCSSLSNPSSVEDETNNVTPYHDQNENREDNYPGYCKG 498

Query: 473 TDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEG 532
           TDK  STNL ++A +CT   +   PAD+V + D+ER   +  SMP   V K ++K   E 
Sbjct: 499 TDKTVSTNLSNEATNCTGTDQEGNPADSVFVSDDERDLRVVVSMP--KVLKPDNKTSLEC 556

Query: 533 RIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDM 592
           +IIEEMSTD   +TPV TGMECVP++ S EAGLPITPCK+EI KD   RNGR K ++ D+
Sbjct: 557 QIIEEMSTDKEANTPVRTGMECVPFVGSSEAGLPITPCKLEIFKDGLGRNGRPKPSTMDL 616

Query: 593 ENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQ 652
           ++G+G  DEPQ GS+SKKRS+E +DE+C ANG SD DFE+ VKVIRWLECEGH+E+NFRQ
Sbjct: 617 DDGSGKGDEPQAGSSSKKRSAERQDEECAANGPSDRDFEYYVKVIRWLECEGHVEKNFRQ 676

Query: 653 KFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKL 712
           KFLTWYSLRATPQEVRIVKVFVDT +EDPASLAEQL+DTFS+ ISS+RSSVVPAGFCMKL
Sbjct: 677 KFLTWYSLRATPQEVRIVKVFVDTLIEDPASLAEQLIDTFSETISSKRSSVVPAGFCMKL 736

Query: 713 WH 714
           WH
Sbjct: 737 WH 738

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357479623|ref|XP_003610097.1| Protein VERNALIZATION INSENSITIVE [Medicago truncatula] gi|355511152|gb|AES92294.1| Protein VERNALIZATION INSENSITIVE [Medicago truncatula]

 Score =  895 bits (2312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/719 (63%), Positives = 546/719 (75%), Gaps = 14/719 (1%)

Query: 1   MEEKRELVYQLSKQSH-SASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKL 59
           MEEKRELVY++SK SH  ASE L+SW+RQEILQILCAE+GKERKYTGLTK+KIIENLLK+
Sbjct: 21  MEEKRELVYEISKSSHDGASEILQSWSRQEILQILCAEMGKERKYTGLTKVKIIENLLKI 80

Query: 60  VSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAI 119
           VSEKKS   +  TD EP S P + Q+P+KRQRK +NP+RL VP  +  +NNSG    N  
Sbjct: 81  VSEKKSSGHDIATDPEPHSFPENGQKPAKRQRKIENPSRLAVPENNVFVNNSGDVNHNTS 140

Query: 120 YCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLEC 179
           YCKNSAC+ATL + D FCKRCSCCIC +YDDNKDPSLWL CSSE PF G SCG+SCHLEC
Sbjct: 141 YCKNSACKATLNQGDAFCKRCSCCICHQYDDNKDPSLWLICSSEAPFPGVSCGLSCHLEC 200

Query: 180 ALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLG 239
           ALK++ SGIGKD      DG FYC+SC KVNDLLGCW+KQL+VAK+ RRVDILCYR+SL 
Sbjct: 201 ALKHDGSGIGKDGKRPKHDGGFYCVSCGKVNDLLGCWRKQLMVAKDARRVDILCYRVSLS 260

Query: 240 QKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAV 299
           QKL+  TE Y+ L +IVD+AVK LE EVGPLTG P+K+GRGIVNRLSSGPEVQKLC  A+
Sbjct: 261 QKLLQGTEMYRELYEIVDEAVKKLEPEVGPLTGSPLKIGRGIVNRLSSGPEVQKLCGVAL 320

Query: 300 ESLDKMISNTI---LPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTL 356
           ESLD M+S  I    PNP++Q ++++ PNMV+FEDV ATSLTV+L SED S  N  SY +
Sbjct: 321 ESLDSMLSKRISPLSPNPTIQDASLLAPNMVRFEDVTATSLTVILCSEDASGENSASYAV 380

Query: 357 WHRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGS 415
           WHR+A +  +P  PTCT+  PN R  + GL P TEY+FK V SN    L  CE+   T  
Sbjct: 381 WHRKADDVNYPLDPTCTILLPNRRLGIEGLLPDTEYRFKFV-SNDPRMLCACEVQVLTAH 439

Query: 416 SRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDK 475
             DEV NCS  ERSQSP TN SSLSNPSSVEDETN+     D  D + +NY +Y K++D+
Sbjct: 440 GEDEVPNCSATERSQSPVTNGSSLSNPSSVEDETNH----SDQTDNRSDNYPSYHKDSDQ 495

Query: 476 IASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRII 535
           +A  NL +DA +C+ LG    P +A SL D++        +  S V KLE+KH  E ++ 
Sbjct: 496 LAPGNLSNDANNCSGLGGVGIPNNADSLSDKQADVGTTAIIASSDVPKLENKHSQEEQVA 555

Query: 536 EEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENG 595
           E+MST++G    VPTG ECVP + S + GLP TPCK+EI+KD + R GRSK + KD+ENG
Sbjct: 556 EDMSTEDG---SVPTGRECVPLVGSSKGGLPNTPCKLEIIKDGRGRKGRSKFSGKDLENG 612

Query: 596 TGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFL 655
           +G R+  +DGSTSKKRSSE +DE C AN  SD DFE+ VKVIR LECEGHIE+NFRQKFL
Sbjct: 613 SGKRNVLRDGSTSKKRSSERQDEGCKANSFSDQDFEYYVKVIRRLECEGHIEKNFRQKFL 672

Query: 656 TWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH 714
           TWYSLRAT QE+RIVK++VDTF+ED ASLAEQL+DTFS+C+S++RSS VPAGFCMKLWH
Sbjct: 673 TWYSLRATSQEIRIVKIYVDTFLEDSASLAEQLVDTFSECVSNKRSS-VPAGFCMKLWH 730

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457169|ref|XP_004146321.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis sativus] gi|449502927|ref|XP_004161782.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis sativus]

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/719 (59%), Positives = 552/719 (76%), Gaps = 7/719 (0%)

Query: 1   MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV 60
           +E+KR LVY++S Q H A E L+SW+RQEIL+ILCAE+GKERKYTGLTKLKIIENLLK+V
Sbjct: 21  LEKKRNLVYEISDQPH-APELLQSWSRQEILEILCAEMGKERKYTGLTKLKIIENLLKIV 79

Query: 61  SEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIY 120
            +KKSG  E  TD++ QSSP  S   SKRQRK D PARLPVPV ++ ++N+ +D   A+Y
Sbjct: 80  GKKKSGSTEDVTDLDNQSSPCPSPNISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVY 139

Query: 121 CKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA 180
           C+NSAC+A + ++D FCKRCSCCIC +YDDNKDPSLWL+CSS+PPF   SC MSCHLECA
Sbjct: 140 CRNSACKANINQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA 199

Query: 181 LKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQ 240
           LK+E+SGI + +  +G++G+F C+SC KVNDL+GCW+KQL+ AK TRRV ILCYR+SL +
Sbjct: 200 LKHEKSGISRGQ-QTGIEGTFCCVSCGKVNDLIGCWRKQLMKAKETRRVAILCYRISLSK 258

Query: 241 KLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVE 300
           KL++  EK++++ +IVD+AVK LE EVGPL G+PV  GRGIVNRLSSGPEVQKLC+ A++
Sbjct: 259 KLLSEDEKFQDVYQIVDEAVKKLEAEVGPLAGVPVGTGRGIVNRLSSGPEVQKLCSLAID 318

Query: 301 SLDKMISNTI---LPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLW 357
           SLD ++S  I   LP+  +Q +N++  N ++FEDV AT + VV+G+ED S G  I Y LW
Sbjct: 319 SLDTLLSTKILHHLPSSMIQDTNLVATNFLRFEDVDATYVAVVVGTEDVSCGETIGYRLW 378

Query: 358 HRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSS 416
           HR+A E  +P  PTCTL  PN RFVV GL P++EY FK +S +GT +LG CE+  ST   
Sbjct: 379 HRKAGETDYPIEPTCTLSQPNLRFVVRGLTPSSEYYFKAISFDGTGDLGTCEVQVSTAIP 438

Query: 417 RDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKI 476
           R++  +C VIERSQSP TN S LSNPSSVEDETNN+ P  D  D+Q  ++ +Y KE++KI
Sbjct: 439 REDDASCLVIERSQSPVTNFSELSNPSSVEDETNNIVPCSDQTDSQTGSFLSYCKESNKI 498

Query: 477 ASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIE 536
            +TN  +D I+CT +    T  D+VS LDEE        +PD +V KLE +H  + +IIE
Sbjct: 499 ITTNQSEDRINCTDVSGIGTAKDSVSSLDEEHVTRKSSMLPDPNVSKLEDRHSSQVQIIE 558

Query: 537 EMSTDN-GVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENG 595
             ++ N G ++ +  G +  P++ S EAGLP+TPCK+EILKD   R+GRSK ++KD ++ 
Sbjct: 559 GTTSMNKGSNSAIQQGTKSTPFVSSSEAGLPVTPCKMEILKDVLGRSGRSKSSTKDRDDK 618

Query: 596 TGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFL 655
               +E ++GSTSKKR++E +D DCTANG+SD DFE+ VK+IRWLECEGHIE+NFRQKFL
Sbjct: 619 GSGGEELRNGSTSKKRNAERQDVDCTANGISDKDFEYYVKLIRWLECEGHIEKNFRQKFL 678

Query: 656 TWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH 714
           TWYSLRAT QEVRIVK FVD F+EDP++LAEQL+DTFS+CISS+++  VP+GFCMKLWH
Sbjct: 679 TWYSLRATTQEVRIVKAFVDNFIEDPSALAEQLVDTFSECISSKKTCAVPSGFCMKLWH 737

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126067|ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|222870534|gb|EEF07665.1| predicted protein [Populus trichocarpa]

 Score =  871 bits (2250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/728 (63%), Positives = 533/728 (73%), Gaps = 65/728 (8%)

Query: 1   MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV 60
           M EKRELVYQLSK    ASE L+SW+RQEILQILCAE+GKERKYTGLTKLKIIE+LLKLV
Sbjct: 3   MNEKRELVYQLSKWP-GASERLQSWSRQEILQILCAEMGKERKYTGLTKLKIIEHLLKLV 61

Query: 61  SEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIY 120
           SEKKSGE EA  D+E + S AS Q  SKRQRK DNP+R+PV ++  A NN  SD  N +Y
Sbjct: 62  SEKKSGECEASPDLETKISAASIQGASKRQRKTDNPSRVPVSLSCVATNNGISDQGNTVY 121

Query: 121 CKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA 180
           CKNSACRATLR  D FCKRCSCCICR+YDDNKDPSLWL CSSEPPF G +C MSCHL+CA
Sbjct: 122 CKNSACRATLRPADTFCKRCSCCICRQYDDNKDPSLWLICSSEPPFQGVACSMSCHLDCA 181

Query: 181 LKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQ 240
           LK E SGIGK+  +  LDGSF C SC KVNDLLGCW+KQL++AK+TRRVDILCYR+SL Q
Sbjct: 182 LKQESSGIGKNGRHGRLDGSFCCFSCGKVNDLLGCWRKQLMMAKDTRRVDILCYRVSLSQ 241

Query: 241 KLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVE 300
           KL+N TEKY+ L +IV +A   LE EVGPL GLPVKMGRGIVNRLSSG EVQKLC  A+E
Sbjct: 242 KLLNGTEKYQKLLEIVGEAATKLEAEVGPLIGLPVKMGRGIVNRLSSGSEVQKLCTFALE 301

Query: 301 SLDKMISNTI---LPNPSVQG----------SNVIVPNMVKFEDVRATSLTVVLGSEDPS 347
           SLDKM+SNTI   LP+P +QG          SN+I P  V FEDV +TSL +VLG ED S
Sbjct: 302 SLDKMLSNTISHPLPDPKMQGNHWCSHVSTDSNMIAPITVNFEDVHSTSLALVLGYEDSS 361

Query: 348 PGNIISYTLWHRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGR 406
             +I+ YTLWHR+ H+  +PA PTC LF PNTR+VV GL PATEY FKVV  NG  ELG 
Sbjct: 362 ADDIVGYTLWHRKGHDLDYPAEPTCRLFLPNTRYVVAGLSPATEYHFKVVPFNGVRELGT 421

Query: 407 CEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNY 466
           CE+  STG +++EV N S++ERSQSP TNCSSLSNPSSVEDETNN  P  D    + +NY
Sbjct: 422 CEVQCSTGMTQEEVLNYSIVERSQSPNTNCSSLSNPSSVEDETNNNPPCNDQIVNRADNY 481

Query: 467 YTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLES 526
            T  K++DKI S N  + A++ +      T ADA+ LLDEE A  +              
Sbjct: 482 RTCLKDSDKIVSANKSNGALNFS-----GTLADAIPLLDEEHATQV-------------- 522

Query: 527 KHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSK 586
                      + TDNG D PV T MEC+P++ + EA LPITPCK+E+ KD Q RNGR K
Sbjct: 523 -----------LITDNGSDAPVQTAMECMPFVSNSEASLPITPCKLEMHKDGQGRNGRFK 571

Query: 587 LNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHI 646
            + KD+ NG                    RDE+C ANG SD DFE+ VK+IRWLECEGHI
Sbjct: 572 SSDKDIVNG--------------------RDEECMANGNSDRDFEYYVKIIRWLECEGHI 611

Query: 647 ERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPA 706
           E+NFRQKFLTWY LRAT QEVR+VK FVDTF+EDPASLAEQ++DTFS+CISSRRSSVVP+
Sbjct: 612 EKNFRQKFLTWYGLRATEQEVRVVKTFVDTFIEDPASLAEQIVDTFSECISSRRSSVVPS 671

Query: 707 GFCMKLWH 714
           GFCMKLWH
Sbjct: 672 GFCMKLWH 679

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735403|emb|CBI17843.3| unnamed protein product [Vitis vinifera]

 Score =  842 bits (2174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/718 (60%), Positives = 516/718 (71%), Gaps = 89/718 (12%)

Query: 1   MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV 60
           MEEKRELVY +SK S    E L+SW+RQEILQILCAE+GKERKYTGLTKLKIIE+LL++ 
Sbjct: 20  MEEKRELVYAVSKWSRGGPEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIEHLLRV- 78

Query: 61  SEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIY 120
                                       RQRK D+P+RLPV   + +++N   DL NAIY
Sbjct: 79  ----------------------------RQRKADHPSRLPVAANNHSISNGDGDLGNAIY 110

Query: 121 CKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA 180
           CKN ACRA L +E  FCKRCSCCIC +YDDNKDPSLWLTCSS+PPF G SCGMSCHLECA
Sbjct: 111 CKNLACRANLSREYEFCKRCSCCICHQYDDNKDPSLWLTCSSDPPFQGVSCGMSCHLECA 170

Query: 181 LKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQ 240
            K+E+SGI KD  +  LDGSFYC+SC KVND+LGCW+KQL++AK TRRVDILCYR+SL Q
Sbjct: 171 FKHEKSGIAKDGRHVRLDGSFYCVSCGKVNDMLGCWRKQLMMAKETRRVDILCYRVSLSQ 230

Query: 241 KLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVE 300
           KL+N T+KY+ L +IV++AVK LE EVGPLTGLPVK  RGIVNRLSSGPEVQ+LCA A+E
Sbjct: 231 KLLNGTKKYQKLYEIVEEAVKKLEAEVGPLTGLPVKTARGIVNRLSSGPEVQRLCALALE 290

Query: 301 SLDKMISNTI---LPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLW 357
           SLD ++SN+     P P +Q + ++ P+ ++FEDV +TSLTV+LGSED S  N+ISY LW
Sbjct: 291 SLDSVLSNSHPRPAPGPKIQDAGLVAPS-IRFEDVCSTSLTVILGSEDSSTDNVISYKLW 349

Query: 358 HRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSS 416
           HR++++  +PA P CT+ APN RF  + L P+TEY FKVVS   T ELG  E+ FST SS
Sbjct: 350 HRKSNDLEYPAEPACTMLAPNKRFTFSDLTPSTEYVFKVVSFQDTRELGMGEVQFSTSSS 409

Query: 417 RDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKI 476
            D++    V ERSQSPATNCSSLSNPSSVEDETNNVTP  D N+ + +NY          
Sbjct: 410 GDDIPKSLVAERSQSPATNCSSLSNPSSVEDETNNVTPYHDQNENREDNY---------- 459

Query: 477 ASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIE 536
                                 D+V + D+ER   +  SMP   V K ++K   E +IIE
Sbjct: 460 ---------------------PDSVFVSDDERDLRVVVSMP--KVLKPDNKTSLECQIIE 496

Query: 537 EMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENGT 596
           EMSTD   +TPV TGMECVP++ S EAGLPITPCK+EI KD                   
Sbjct: 497 EMSTDKEANTPVRTGMECVPFVGSSEAGLPITPCKLEIFKD------------------- 537

Query: 597 GNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFLT 656
              DEPQ GS+SKKRS+E +DE+C ANG SD DFE+ VKVIRWLECEGH+E+NFRQKFLT
Sbjct: 538 ---DEPQAGSSSKKRSAERQDEECAANGPSDRDFEYYVKVIRWLECEGHVEKNFRQKFLT 594

Query: 657 WYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH 714
           WYSLRATPQEVRIVKVFVDT +EDPASLAEQL+DTFS+ ISS+RSSVVPAGFCMKLWH
Sbjct: 595 WYSLRATPQEVRIVKVFVDTLIEDPASLAEQLIDTFSETISSKRSSVVPAGFCMKLWH 652

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449507054|ref|XP_004162921.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis sativus]

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/718 (59%), Positives = 534/718 (74%), Gaps = 9/718 (1%)

Query: 1   MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV 60
           M+EKRELV+++SK S+ ASETL+SW+RQ+ILQ+LCAE+GKERKYTGLTK KII++LL+LV
Sbjct: 22  MQEKRELVHEISK-SNVASETLQSWSRQDILQVLCAEMGKERKYTGLTKQKIIKHLLRLV 80

Query: 61  SEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIY 120
           SEKKS   E   ++EPQ SP+   + +KRQRK+++ A+L VP TD   ++S +DLV+   
Sbjct: 81  SEKKSSVSEVLKNLEPQ-SPSGGHKITKRQRKSEHVAQLSVPATDFPTSSSHNDLVSTAC 139

Query: 121 CKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA 180
           CKN ACRATL   D FC+RCSCCICR+YDDNKDPSLW++CS+EPPF GDSC MSCHLECA
Sbjct: 140 CKNLACRATLNPGDAFCRRCSCCICRQYDDNKDPSLWISCSAEPPFQGDSCNMSCHLECA 199

Query: 181 LKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQ 240
           LK+ RSGI K     G+DGSFYC+SC K+NDLLGC +KQL+ AK+TRRVDILCYR+SL Q
Sbjct: 200 LKDVRSGILKAGRSKGIDGSFYCVSCGKLNDLLGCCRKQLIHAKDTRRVDILCYRVSLSQ 259

Query: 241 KLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVE 300
           KL++ TEKYK L +IVD++V+ LE+EVGP+ G+PVKMGRGIVNRLSSGPEVQKLCA A+E
Sbjct: 260 KLLHGTEKYKVLYQIVDESVRKLEEEVGPIAGVPVKMGRGIVNRLSSGPEVQKLCASAIE 319

Query: 301 SLDKMISNTIL---PNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLW 357
            LD M+S+  L   PNP VQ +N +  NM++FEDV++TSLT+VL  E+ S  N I +TLW
Sbjct: 320 LLDSMVSSQSLHLSPNPDVQDANFVPANMIRFEDVKSTSLTLVLSYENGSSENQIGFTLW 379

Query: 358 HRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSS 416
           HR+A +  +PA PTC L  P  R +V GL PAT+Y FK+V   GT EL   E+ FST   
Sbjct: 380 HRKADDADYPAEPTCILRQPKARCLVMGLSPATKYHFKIVQFEGTRELREFEVQFSTIGE 439

Query: 417 RDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKI 476
            +E   C  IERSQS ATNCS LSNPSSVEDET ++ P  D  +    N   YSK  + +
Sbjct: 440 VEENPGCLEIERSQSHATNCSDLSNPSSVEDETTDILPYGDRTNNLGKNSPAYSKGIEIL 499

Query: 477 ASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIE 536
           +S  L  DA + +  G    PA  VS L+E  A  + G +P+S   KLE++H P      
Sbjct: 500 SSAILSTDAFNLSDNGEEGMPAGTVSALNEATAAGMVGLIPNSAGSKLENRHGPAA---P 556

Query: 537 EMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENGT 596
           +++TDN + T V +GM+   ++   + GLPITPCK+E+LKD+  R  R K + KD EN T
Sbjct: 557 KLNTDNQLSTLVRSGMDGQQFVSCSQDGLPITPCKLEVLKDSLGRGERPKSSCKDQENRT 616

Query: 597 GNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFLT 656
               EPQDG TSK R+ E +D+ C  NG+SD DFEH VKVIRWLEC+G+IE+NFRQKFLT
Sbjct: 617 RKGGEPQDGGTSKMRTGERQDDKCAENGVSDRDFEHYVKVIRWLECKGYIEKNFRQKFLT 676

Query: 657 WYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH 714
           WYSLRA+ QEV+IVKVFVDTF+EDPASLAEQL+DTFS+CISS++ +  P GFCMKLWH
Sbjct: 677 WYSLRASQQEVKIVKVFVDTFIEDPASLAEQLVDTFSECISSKKPTTTPPGFCMKLWH 734

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|380710177|gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/722 (57%), Positives = 518/722 (71%), Gaps = 11/722 (1%)

Query: 1   MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV 60
           MEEKRELVY+LSKQSH A E L+SW+RQEILQILCAE+GKERKYTGLTKLKIIENLLK+V
Sbjct: 21  MEEKRELVYELSKQSHGAPEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIV 80

Query: 61  SEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIY 120
           SEKKS E+E  +++E Q S  S QR SKRQRK ++P+R P+    ++  N+   L N +Y
Sbjct: 81  SEKKSLEQENTSNLEMQPSSESGQRSSKRQRKAEHPSRFPIEANTSSTTNTNVSLANVVY 140

Query: 121 CKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA 180
           CKN ACRA L  +D FCKRCSCCICR YDDNKDPSLWL CSSEPPF GDSCGMSCHLECA
Sbjct: 141 CKNLACRAKLSGQDAFCKRCSCCICRNYDDNKDPSLWLICSSEPPFQGDSCGMSCHLECA 200

Query: 181 LKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQ 240
           +K+ +S I  D+   G +G+FYC+SC K NDLL   KKQL+VA++TRRVDILCYRLSL Q
Sbjct: 201 MKHGKSCITTDKSDKGNNGTFYCVSCGKANDLLSSLKKQLIVARDTRRVDILCYRLSLSQ 260

Query: 241 KLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVE 300
           KL    E    L +++D+AV  LE +VGPLTGLPVKM RGIVNRLS GP VQ+LC  AVE
Sbjct: 261 KLSFGAENCPKLYEVLDEAVNKLEADVGPLTGLPVKMARGIVNRLSFGPAVQQLCGLAVE 320

Query: 301 SLDKMISNTILPNPS---VQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLW 357
            +D ++S  +   PS   V+   VI   +V+FEDV  +S+TVVL SE  S  N++ Y+LW
Sbjct: 321 YIDALLSERVSEMPSNAKVKDCEVIESKLVRFEDVFPSSVTVVLSSEGSSMENVVGYSLW 380

Query: 358 HRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSS 416
           HR+A E  +P  PT TLF+PNTRFV++ L PAT+Y  K+VS +   ELG  E+ F +  +
Sbjct: 381 HRKAVETEYPVEPTRTLFSPNTRFVLSDLMPATDYVLKIVSLDSKKELGMFEVQFCSSKA 440

Query: 417 RDEVTNCSV----IERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKE 472
            +E++N ++    +ERSQSP TNCS+LSNPSSVEDETNN+    +  + + +N  +    
Sbjct: 441 ENELSNLNMKSLEVERSQSPPTNCSNLSNPSSVEDETNNIVLCSNEAENRGDNCLSCCDN 500

Query: 473 TDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEG 532
           TDK  ST+LC   +              VSL DEE +     S+P++    LE+K   + 
Sbjct: 501 TDKAISTDLCCTTVAFASKSHIGNEEVMVSLGDEEDSIVKVTSLPNTDAINLENKQCSDV 560

Query: 533 RIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDM 592
           +  EE STDNG + P+ T +E  P++ S++AGLPITPCK+E +K +  R G+S+  SKD+
Sbjct: 561 QTTEETSTDNGSNAPLQTALEFAPFVGSVDAGLPITPCKMENVKGSLGRKGKSEHCSKDL 620

Query: 593 ENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQ 652
           +NG+G  D PQ G +SKKR  E   E+C   G  D DFE+ VKV+RWLEC  HI++ FRQ
Sbjct: 621 DNGSGKEDGPQVGCSSKKRVGEWH-EECAGTG--DKDFEYYVKVVRWLECGEHIDKTFRQ 677

Query: 653 KFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKL 712
           KFLTWYSLRATPQ+VRIVK FVDT +EDPASLA QL+DTFSD ISS+R+SVVPAGFC+KL
Sbjct: 678 KFLTWYSLRATPQDVRIVKAFVDTLIEDPASLAGQLVDTFSDVISSKRASVVPAGFCLKL 737

Query: 713 WH 714
           WH
Sbjct: 738 WH 739

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	714
TAIR|locus:2173004	620	VIN3 "VERNALIZATION INSENSITIV	0.453	0.522	0.495	8.2e-134
TAIR|locus:2128946	714	VEL1 "vernalization5/VIN3-like	0.796	0.796	0.428	1.6e-109
TAIR|locus:2044405	529	VEL2 "AT2G18880" [Arabidopsis	0.438	0.591	0.439	2.7e-101
TAIR|locus:2094859	602	VRN5 "AT3G24440" [Arabidopsis	0.386	0.458	0.426	1.5e-81
TAIR|locus:2044500	239	VEL3 "AT2G18870" [Arabidopsis	0.106	0.317	0.578	1.7e-18
TAIR|locus:2087403	1162	TTA2 "TITANIA 2" [Arabidopsis	0.198	0.122	0.246	9.7e-06
UNIPROTKB|Q84N38	549	PVIP "OBERON-like protein" [Ni	0.127	0.165	0.294	0.00084

TAIR|locus:2173004 VIN3 "VERNALIZATION INSENSITIVE 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 809 (289.8 bits), Expect = 8.2e-134, Sum P(3) = 8.2e-134
 Identities = 175/353 (49%), Positives = 227/353 (64%)

Query:   119 IYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLE 178
             I C+N ACRA L  +D FC+RCSCCIC+K+DDNKDPSLWLTC        D+CG SCHLE
Sbjct:   128 ICCENLACRAALGCDDTFCRRCSCCICQKFDDNKDPSLWLTC--------DACGSSCHLE 179

Query:   179 CALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSL 238
             C LK +R GIG D     LDG FYC  C K NDLLGCW+KQ+ VAK TRRVD+LCYRLSL
Sbjct:   180 CGLKQDRYGIGSD----DLDGRFYCAYCGKDNDLLGCWRKQVKVAKETRRVDVLCYRLSL 235

Query:   239 GQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACA 298
             GQKL+  T KY+NL +++D+AVK LE +VGPL+G  +KM RGIVNRLSSG  VQKLC+ A
Sbjct:   236 GQKLLRGTTKYRNLLELMDEAVKKLEGDVGPLSGWAMKMARGIVNRLSSGVHVQKLCSQA 295

Query:   299 VESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGN---IISYT 355
             +E+LDK++S    P+ SV G    +   V+ E+++A S+TV + SE+PS      I  + 
Sbjct:   296 MEALDKVVS----PSESVSGQGDKMT--VRVEEIQARSVTVRVDSEEPSSSTQNKITGFR 349

Query:   356 LWHRRAH-EGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTG 414
             L+ R++  E   ++  C ++ P T   + GL P TE+  +VVS N   +L   E+ F+T 
Sbjct:   350 LFCRKSKDEECSSQGNCVVYLPETTSAIQGLEPDTEFCLRVVSFNEEGDLDESELRFTT- 408

Query:   415 SSRDEVTNCSVIERSQSPATNCSS--LSNPSSVEDETNNVTPDRDPNDAQVNN 465
               +D+          QSP TN SS   SNPS  EDE+NNV       +   +N
Sbjct:   409 -LKDDGDEAG---DQQSPLTNSSSGLCSNPSLPEDESNNVNKSCSKGNGDKDN 457

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009409 "response to cold" evidence=IEP

GO:0010048 "vernalization response" evidence=IEP

GO:0001666 "response to hypoxia" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2128946 VEL1 "vernalization5/VIN3-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1082 (385.9 bits), Expect = 1.6e-109, P = 1.6e-109
 Identities = 273/637 (42%), Positives = 362/637 (56%)

Query:     1 MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV 60
             ++EKR+LVY+LSKQSH A+E L++W+RQEILQILCAE+GKERKYTGLTK+KIIE LLK+V
Sbjct:    20 VDEKRQLVYELSKQSHLAAEVLQAWSRQEILQILCAEMGKERKYTGLTKVKIIETLLKIV 79

Query:    61 SEKKSGEREAKTDIEXXXXXXXXXXXXXXXXXNDNPARLPVPVTDAAMNN--SGS-DLVN 117
             SEK SGE E K   +                  DNP+R  +P T+   +N  SGS   VN
Sbjct:    80 SEKNSGECEGK---KRDSDCLPIQRNTKRQRKVDNPSRYVIPATNIVTSNNASGSCSSVN 136

Query:   118 A------IYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSC 171
                    IYCKN ACRA LR+ED FC+RCSCCICRKYDDNKDPSLWLTCSS+PPF G+SC
Sbjct:   137 TKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDNKDPSLWLTCSSDPPFEGESC 196

Query:   172 GMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDI 231
             G SCHLECA   E+SG+GKD+   G    FYC+SC K N LL CWKKQL +AK TRRV++
Sbjct:   197 GFSCHLECAFNTEKSGLGKDKQSEGC--CFYCVSCGKANSLLECWKKQLTIAKETRRVEV 254

Query:   232 LCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEV 291
             LCYRL L QKL+ ++ KY+NL ++VD+AVK LE +VGPLTGLP+KMGRGIVNRL SGP+V
Sbjct:   255 LCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADVGPLTGLPMKMGRGIVNRLHSGPDV 314

Query:   292 QKLCACAVESLDKMISN----TILPNPSV----QGSNVIVPNMVKFEDVRATSLTVVLGS 343
             QKLC+ A+ESL+ + +       LP+P      Q  + ++ N +  +   AT+ +  +  
Sbjct:   315 QKLCSSALESLETIATTPPDVAALPSPRSSKMQQDCSYVLSNEISADT--ATTGSTKIRF 372

Query:   344 EDPSPGNIISYTLWHRRAHEGFPARPTCTLFA------PNTRFVVTGLCPATEYQFKVVS 397
             ED    N  S T+    A    P+ P    ++      P   +     C       + V 
Sbjct:   373 EDV---NATSLTVV--LASNEIPSPPNIVHYSIWHRKVPEKDYPEKSTCTLFIPNTRFVV 427

Query:   398 SNGTTELGRC-EIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDR 456
             S        C ++   +G+    V   +V+ RS     NCSS     SV   TN  T   
Sbjct:   428 SGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAEEGANCSSAVE-RSVSPLTNCSTLSS 486

Query:   457 DPN--DAQVNNYYTYSKE-TDKIASTNLCDDAIDCTVLGR--GTTPADAVSL-LDEERAN 510
             +P+  +A+ NN Y   K+ + K    N    ++D +   R   TT +D V +  D E+  
Sbjct:   487 NPSSVEAESNNDYIVPKKPSSKNEDNN--SPSVDESAAKRMKRTTDSDIVQIEKDVEQIV 544

Query:   511 NIDGSMPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPC 570
              +D    ++ + K ES+ P                  V T    V    S +A LPITP 
Sbjct:   545 LLDDEEQEAVLDKTESETPV-----------------VVTTKSLVGNRNSSDASLPITPF 587

Query:   571 KIEILKDAQARNGRSKLNSKDMENGTGNRDEPQDGST 607
             + + +K+ QAR    +++ KD  N   N D   +G T
Sbjct:   588 RSDEIKNRQAR---IEISMKDNCN---NGDHSANGGT 618

GO:0005634 "nucleus" evidence=ISM

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA;IPI

GO:0031519 "PcG protein complex" evidence=IDA

GO:0035064 "methylated histone residue binding" evidence=IDA

GO:0048587 "regulation of short-day photoperiodism, flowering" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2044405 VEL2 "AT2G18880" [Arabidopsis thaliana (taxid:3702)]

 Score = 664 (238.8 bits), Expect = 2.7e-101, Sum P(3) = 2.7e-101
 Identities = 146/332 (43%), Positives = 204/332 (61%)

Query:   119 IYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLE 178
             +YC+N AC+  LR+E  FCKRCSCCIC KYDDNKDPSLWLTC+S+  F G+SCG+SCHL 
Sbjct:   117 MYCQNLACQNKLREEATFCKRCSCCICFKYDDNKDPSLWLTCNSDSQFDGESCGLSCHLN 176

Query:   179 CALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSL 238
             CA  +E+SG+ +D   S +DG F C+SC K N  + C KKQL++A   RRV + CYR+ L
Sbjct:   177 CAFDSEKSGLKEDTPSSDIDGCFNCVSCGKTNSKIECLKKQLIIANEERRVGVFCYRILL 236

Query:   239 GQKLVNATEKYKNLSKIVDDAVKMLEDEVG-PLTGLPVKMGRGIVNRLSSGPEVQKLCAC 297
               KL+  T+KY  +S+ V+ AV  L++E G P++ LP KM RG+VNRL    +V+K C+ 
Sbjct:   237 AHKLLKGTKKYIIVSEEVEKAVMHLKNEFGVPISCLPSKMSRGLVNRLCCAEKVKKHCSS 296

Query:   298 AVESLDKMISNTILPNPS-VQGSNVIVPNMVKFEDVRATSLTVVLGSEDP-SPGNIISYT 355
             A++ LD       LP PS +QGS  I     + E V ATS+T  + +E+  S G+   Y 
Sbjct:   297 ALKELDG------LPLPSTIQGSMKI-----RIESVLATSVTFDIEAEESFSWGDTNHYR 345

Query:   356 LWHRRAHEGFPARP-TCTLFAPNT--RFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFS 412
             + +R+  E   ++  T  LF+ ++  RF V  L PATEY FK+VS +G  EL   E   S
Sbjct:   346 MVYRKVSEKHSSKDLTRELFSTSSHQRFTVMELTPATEYWFKIVSFSGVEELSVDEFIVS 405

Query:   413 TGSSRDEVTNCSVIERSQSPATNCSSLSNPSS 444
             T + +DE    + +  + S   N + +    S
Sbjct:   406 TKTLQDE--EVAAVLLNMSNCNNANKMEKSGS 435

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2094859 VRN5 "AT3G24440" [Arabidopsis thaliana (taxid:3702)]

 Score = 578 (208.5 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
 Identities = 127/298 (42%), Positives = 172/298 (57%)

Query:   108 MNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFG 167
             ++  G  L ++  CKN++CRA + KED FCKRCSCC+C  +D+NKDPSLWL C  E    
Sbjct:    36 VDGGGGCLRSSWICKNASCRANVPKEDSFCKRCSCCVCHNFDENKDPSLWLVCEPEKSDD 95

Query:   168 GDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTR 227
              + CG+SCH+ECA +  + G+        LDG F C SC KV+ +LGCWKKQLV AK  R
Sbjct:    96 VEFCGLSCHIECAFREVKVGVIALGNLMKLDGCFCCYSCGKVSQILGCWKKQLVAAKEAR 155

Query:   228 RVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSS 287
             R D LCYR+ LG +L+N T ++  L +IV  A  MLEDEVGPL G   +  RGIV+RL  
Sbjct:   156 RRDGLCYRIDLGYRLLNGTSRFSELHEIVRAAKSMLEDEVGPLDGPTARTDRGIVSRLPV 215

Query:   288 GPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKF--EDVRATSLTVVLGSED 345
                VQ+LC  A++   ++ +N         G + +VP   +F  ED+    +T+ L  E 
Sbjct:   216 AANVQELCTSAIKKAGELSANA--------GRD-LVPAACRFHFEDIAPKQVTLRL-IEL 265

Query:   346 PSPG--NIISYTLWHRRAHEGFPARPTCTLFAP----NTRFVVTGLCPATEYQFKVVS 397
             PS    ++  Y LW+ +  E     P   LF        R V++ L P TEY F+VVS
Sbjct:   266 PSAVEYDVKGYKLWYFKKGE----MPEDDLFVDCSRTERRMVISDLEPCTEYTFRVVS 319

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009909 "regulation of flower development" evidence=IGI;RCA

GO:0010048 "vernalization response" evidence=IMP

GO:0016568 "chromatin modification" evidence=IMP

GO:0016571 "histone methylation" evidence=RCA;IMP

GO:0006306 "DNA methylation" evidence=RCA

GO:0006342 "chromatin silencing" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0010388 "cullin deneddylation" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0016572 "histone phosphorylation" evidence=RCA

GO:0016579 "protein deubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0031047 "gene silencing by RNA" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2044500 VEL3 "AT2G18870" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 44/76 (57%), Positives = 56/76 (73%)

Query:   628 MDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQ 687
             +  E CVK+IR LEC G++E  FRQKFLTW+SLRAT QE   V  F++ F +D  +LAEQ
Sbjct:   142 LGLEQCVKIIRKLECSGYVESTFRQKFLTWFSLRATSQERNTVTTFMNAFNDDSMALAEQ 201

Query:   688 LMDTFSDCISSRRSSV 703
             L+DTFSDCI S+ S +
Sbjct:   202 LVDTFSDCIWSKGSVI 217

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2087403 TTA2 "TITANIA 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 9.7e-06, P = 9.7e-06
 Identities = 39/158 (24%), Positives = 67/158 (42%)

Query:   126 CRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNE- 184
             CR   RK D FC  C C +C  +D   +   W+ C        D C   CH +C +K   
Sbjct:   823 CRVCSRK-DGFCSACMCLVCSNFDMASNTCSWVGC--------DVCLHWCHTDCGIKESY 873

Query:   185 -RSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLV 243
              R+GI         +  F+C++C   +++ G  K+  +      + +  C  L    K+ 
Sbjct:   874 IRNGINASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIF 933

Query:   244 NATE--KYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGR 279
             ++++  + K L +  D  +  L+ +   L GLP    R
Sbjct:   934 SSSKDSRGKQLRQAADAMLASLKSK---LIGLPEACNR 968

GO:0005634 "nucleus" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0001708 "cell fate specification" evidence=IGI

GO:0009880 "embryonic pattern specification" evidence=IGI

GO:0090421 "embryonic meristem initiation" evidence=IGI

UNIPROTKB|Q84N38 PVIP "OBERON-like protein" [Nicotiana benthamiana (taxid:4100)]

 Score = 122 (48.0 bits), Expect = 0.00084, Sum P(2) = 0.00084
 Identities = 33/112 (29%), Positives = 48/112 (42%)

Query:   121 CKNSACRATLRKEDV----------FCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDS 170
             C+N AC + L  E+           FC  C C IC K+D   +   W+ C        D 
Sbjct:   196 CRNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGC--------DL 247

Query:   171 CGMSCHLECALKNERSGIGKD--RCYSGLDGSFYCISCRKVNDLLGCWKKQL 220
             C    H +CA+ N + G G       S  +  F C +C + ++LLG W K +
Sbjct:   248 CSHWTHTDCAISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLG-WVKDV 298

GO:0046740 "spread of virus in host, cell to cell" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	714
pfam07227	446	pfam07227, DUF1423, Protein of unknown function (D	3e-07
cd00063	93	cd00063, FN3, Fibronectin type 3 domain; One of th	5e-06
smart00060	83	smart00060, FN3, Fibronectin type 3 domain	2e-04
pfam00041	84	pfam00041, fn3, Fibronectin type III domain	2e-04

>gnl|CDD|219342 pfam07227, DUF1423, Protein of unknown function (DUF1423)

 Score = 52.8 bits (127), Expect = 3e-07
 Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 26/160 (16%)

Query: 121 CKNSACRATLRKEDV----------FCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDS 170
           C+N AC++ L  +D           FC  C C +C K+D   +   W+ C        D 
Sbjct: 100 CRNIACQSLLPVDDCDCKICSNKKGFCSLCMCVVCSKFDFAVNTCRWVGC--------DV 151

Query: 171 CGMSCHLECALKNE--RSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVV--AKNT 226
           C   CH +CA+++   R G          +  F+C +C   +++ G + K +    A N 
Sbjct: 152 CSHWCHTDCAIRDGLIRPGPSLKGGSGTTEMQFHCRACNHTSEMFG-FVKDVFQHCAPNW 210

Query: 227 RRVDILCYRLSLGQKLVNATE--KYKNLSKIVDDAVKMLE 264
            R + L   L   +K+   +E  + K L    ++ ++ L+
Sbjct: 211 DR-ETLIKELDFVRKIFRGSEDARGKKLFWKCEELIEKLK 249

This family represents a conserved region approximately 500 residues long within a number of Arabidopsis thaliana proteins of unknown function. Length = 446

>gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

 Score = 45.2 bits (107), Expect = 5e-06
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  ++  DV +TS+T+     +   G I  Y + +R    G             T + +T
Sbjct: 4   PTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVE-VTPGSETSYTLT 62

Query: 384 GLCPATEYQFKVVSSNG 400
           GL P TEY+F+V + NG
Sbjct: 63  GLKPGTEYEFRVRAVNG 79

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93

>gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain

 Score = 40.3 bits (94), Expect = 2e-04
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTL-WHRRAHEGFPARPTCTLFAPNTRFV 381
           P+ ++  DV +TS+T+   S E P    I  Y + +     E         +   +T + 
Sbjct: 4   PSNLRVTDVTSTSVTL---SWEPPPDDGITGYIVGYRVEYREEGSEWKEVNVTPSSTSYT 60

Query: 382 VTGLCPATEYQFKVVSSNG 400
           +TGL P TEY+F+V + NG
Sbjct: 61  LTGLKPGTEYEFRVRAVNG 79

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83

>gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)

Query: 327 VKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTG 384
           +   DV +TSLT+   S  P PGN  I  Y + +R  + G   +   T+    T + +TG
Sbjct: 6   LTVTDVTSTSLTL---SWSPPPGNGPITGYEVEYRPVNGGEEWK-EITVPGTTTSYTLTG 61

Query: 385 LCPATEYQFKVVSSNGTTE 403
           L P TEY+ +V + NG  E
Sbjct: 62  LKPGTEYEVRVQAVNGAGE 80

Length = 84

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	714
PF07227	446	DUF1423: Protein of unknown function (DUF1423); In	100.0
PF00041	85	fn3: Fibronectin type III domain; InterPro: IPR003	98.58
cd00063	93	FN3 Fibronectin type 3 domain; One of three types	97.98
smart00060	83	FN3 Fibronectin type 3 domain. One of three types	97.08
KOG4221	1381	consensus Receptor mediating netrin-dependent axon	95.69
PF09294	106	Interfer-bind: Interferon-alpha/beta receptor, fib	95.6
KOG3513	1051	consensus Neural cell adhesion molecule L1 [Signal	94.09
KOG4221	1381	consensus Receptor mediating netrin-dependent axon	93.97
smart00249	47	PHD PHD zinc finger. The plant homeodomain (PHD) f	93.96
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	93.21
KOG3513	1051	consensus Neural cell adhesion molecule L1 [Signal	85.63
PF00628	51	PHD: PHD-finger; InterPro: IPR019787 Zinc finger (	84.92
PF07498	43	Rho_N: Rho termination factor, N-terminal domain;	82.16

>PF07227 DUF1423: Protein of unknown function (DUF1423); InterPro: IPR004082 A total of 715 potential protein-coding genes have been identified in the nucleotide sequence of Arabidopsis thaliana chromosome 5, with an average gene density of 1 gene per 4001 bp []

Probab=100.00  E-value=1.5e-52  Score=450.38  Aligned_cols=153  Identities=39%  Similarity=0.770  Sum_probs=143.7

Q ss_pred             CCCCCCcccccccccccccccCCc----------CCcCCceeeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhh
Q 005110          111 SGSDLVNAIYCKNSACRATLRKED----------VFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA  180 (714)
Q Consensus       111 ~~~~~~~~~~C~N~aCra~L~~ed----------~FCr~CsC~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCA  180 (714)
                      .=.++|.+.+|||+||||+||++|          |||++||||||+|||+|+|||+||+||        +||||||+|||
T Consensus        90 ~LveiFl~~rCrN~aC~s~LP~ddc~C~iC~~~~gFC~~C~C~iC~kfD~~~n~~~Wi~Cd--------~CgH~cH~dCA  161 (446)
T PF07227_consen   90 ELVEIFLYKRCRNLACRSQLPVDDCDCKICCSEPGFCRRCMCCICSKFDDNKNTCSWIGCD--------VCGHWCHLDCA  161 (446)
T ss_pred             HHHHHHHHHhcCCHHhhccCCccccCcchhcCCCCccccCCccccCCcccCCCCeeEEecc--------CCCceehhhhh
Confidence            345689999999999999999976          999999999999999999999999998        99999999999


Q ss_pred             hhcccccccc--CCCccCcceeEEeccCCCccchhHHHHHHHHHhhccccchhhhhhhhchhhhccccH--HHHHHHHHH
Q 005110          181 LKNERSGIGK--DRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATE--KYKNLSKIV  256 (714)
Q Consensus       181 Lr~~~~G~~~--~g~~~~lD~~f~C~~Cgk~sdLlg~w~Kql~~ake~rrvD~Lc~rL~l~~kll~GS~--~~k~L~~~v  256 (714)
                      ||+++||+|.  .|+.+++||+|||++|||+|||||||+++|.+|+++||+|+||+||++++|||+||+  +||+||+++
T Consensus       162 Lr~~~i~~G~s~~g~~g~~d~~f~C~~C~~~seLlG~vk~vf~~ca~~~~~d~L~~eL~l~~rIf~GSed~rgk~L~~~~  241 (446)
T PF07227_consen  162 LRHELIGTGPSVKGSIGTLDMQFHCRACGKTSELLGFVKKVFQTCAKAWRVDVLCKELDLVRRIFRGSEDYRGKELHEKV  241 (446)
T ss_pred             cccccccCCccCCCCCccCceEEEccCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhCccchhHHHHHHHH
Confidence            9999997765  466688999999999999999999999999999999999999999999999999999  479999999


Q ss_pred             HHHHHHhhhccCCCC
Q 005110          257 DDAVKMLEDEVGPLT  271 (714)
Q Consensus       257 e~A~~KLe~evgpl~  271 (714)
                      ++|++|||++++++.
T Consensus       242 e~al~KL~~~~~~~~  256 (446)
T PF07227_consen  242 EEALAKLENGVIDSS  256 (446)
T ss_pred             HHHHHHHhCCCCCHH
Confidence            999999999997653

Amongst the gene products is a well-conserved family of 130.7kDa proteins that share no sequence similarity with any other known proteins, other than in plants. The sequences are characterised by an N-terminal domain of variable length, a central cysteine-rich region and a relatively acidic C-terminal domain. The sequences may possess a PHD finger.

>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []

Probab=98.58  E-value=2.9e-07  Score=75.49  Aligned_cols=82  Identities=26%  Similarity=0.403  Sum_probs=67.9

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++.+++++||+|-+.........+.||.|.++..... .......+....+.++|.||.|.|.|.|||.+++..|
T Consensus         2 ~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~g   80 (85)
T PF00041_consen    2 APENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNST-SDWQEVTVPGNETSYTITGLQPGTTYEFRVRAVNSDG   80 (85)
T ss_dssp             SSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSS-SEEEEEEEETTSSEEEEESCCTTSEEEEEEEEEETTE
T ss_pred             cCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccc-eeeeeeeeeeeeeeeeeccCCCCCEEEEEEEEEeCCc
Confidence            456799999999999999998875678899999999887664 1233445677777999999999999999999999888


Q ss_pred             cCcc
Q 005110          403 ELGR  406 (714)
Q Consensus       403 elg~  406 (714)
                       .|.
T Consensus        81 -~g~   83 (85)
T PF00041_consen   81 -EGP   83 (85)
T ss_dssp             -EEE
T ss_pred             -CcC
Confidence             544

They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....

>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

Probab=97.98  E-value=7.3e-05  Score=59.43  Aligned_cols=72  Identities=31%  Similarity=0.465  Sum_probs=56.9

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeee---cCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          327 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLF---APNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       327 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~---~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      |++....+.++.|.+.........+.+|.|++++..+.    ....+.   ....++.|.+|.|.|.|.|+|.++...+
T Consensus         7 ~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~----~~~~~~~~~~~~~~~~i~~l~p~~~Y~~~v~a~~~~~   81 (93)
T cd00063           7 LRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSG----DWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNGGG   81 (93)
T ss_pred             cEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCCCC----CCEEeeccCCcccEEEEccccCCCEEEEEEEEECCCc
Confidence            67888889999999988875446789999999987521    111222   3678999999999999999999998744

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.

>smart00060 FN3 Fibronectin type 3 domain

Probab=97.08  E-value=0.0054  Score=47.07  Aligned_cols=74  Identities=28%  Similarity=0.385  Sum_probs=52.3

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecC-CceeEeecCCcceeeeEEEEeccCCc
Q 005110          327 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAP-NTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       327 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p-~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      +....+.+.++.|-.+..... .. .+|.+++.........+-..+...+ +.++.|.+|.|.|-|.|+|.+++..|
T Consensus         7 ~~~~~~~~~~~~v~W~~~~~~-~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~v~v~a~~~~g   81 (83)
T smart00060        7 LRVTDVTSTSVTLSWEPPPDD-GI-TGYIVGYRVEYREEGSSWKEVNVTPSSTSYTLTGLKPGTEYEFRVRAVNGAG   81 (83)
T ss_pred             EEEEEEeCCEEEEEECCCCCC-CC-CccEEEEEEEEecCCCccEEEEecCCccEEEEeCcCCCCEEEEEEEEEcccC
Confidence            778888888899888733222 22 8999998877554211222222223 58999999999999999999988643

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]

Probab=95.69  E-value=0.018  Score=70.77  Aligned_cols=76  Identities=21%  Similarity=0.305  Sum_probs=60.8

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCceeeec-CCceeEeecCCcceeeeEEEEeccC
Q 005110          325 NMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCTLFA-PNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~~~~-p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      .-++.|-+.++||.|-+....+  .-..|+||++=||+...+ +-.   -++.. -.++.++.+|.|.|+|.|||-++|-
T Consensus       620 ~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~---~t~v~~n~~~~l~~~Lep~T~Y~vrIsa~t~  696 (1381)
T KOG4221|consen  620 QNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVN---ETVVKGNTTQYLFNGLEPNTQYRVRISAMTV  696 (1381)
T ss_pred             cceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccc---eeecccchhhhHhhcCCCCceEEEEEEEecc
Confidence            3499999999999999998875  357899999999966554 221   24444 6788899999999999999999987


Q ss_pred             Ccc
Q 005110          401 TTE  403 (714)
Q Consensus       401 ~~e  403 (714)
                      -|.
T Consensus       697 nGt  699 (1381)
T KOG4221|consen  697 NGT  699 (1381)
T ss_pred             CCC
Confidence            553

>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology

Probab=95.60  E-value=0.029  Score=49.42  Aligned_cols=85  Identities=18%  Similarity=0.164  Sum_probs=56.8

Q ss_pred             CceEEEEEeeceeEEEEeCcCC---------CCCCCcce---EEEEeeecCCCCCCCCceeeecCCceeEeecCCcceee
Q 005110          324 PNMVKFEDVRATSLTVVLGSED---------PSPGNIIS---YTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEY  391 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~---------~s~~~i~G---y~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY  391 (714)
                      +..|.+ .+...+|.|.+....         .+..++-+   |+|-||+....   .-+-.+...++.++|.+|.|.|+|
T Consensus         5 PP~v~v-~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~---~~~~~~~~~~~~~~l~~L~p~t~Y   80 (106)
T PF09294_consen    5 PPSVNV-SSCGGSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSN---EKKKEIETKNSSVTLSDLKPGTNY   80 (106)
T ss_dssp             SSEEEE-EEETTEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTS---CEEEEEESSSEEEEEES--TTSEE
T ss_pred             CCEEEE-EECCCEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCc---cceEEEeecCCEEEEeCCCCCCCE
Confidence            344777 788888888766654         12344544   99999998764   234466778889999999999999


Q ss_pred             eEEEEeccCCc-cCc-ceeeEEe
Q 005110          392 QFKVVSSNGTT-ELG-RCEIWFS  412 (714)
Q Consensus       392 ~fkvvsF~~~~-elg-~~E~k~~  412 (714)
                      +|+|-+|.... .-| .++.+|.
T Consensus        81 Cv~V~~~~~~~~~~s~~S~~~C~  103 (106)
T PF09294_consen   81 CVSVQAFSPSQNKNSQPSEPQCI  103 (106)
T ss_dssp             EEEEEEEECSSTEEEEEBSEEEE
T ss_pred             EEEEEEEeccCCCcCCCCCCEeE
Confidence            99999844322 222 3445554

They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....

>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]

Probab=94.09  E-value=0.22  Score=61.17  Aligned_cols=89  Identities=16%  Similarity=0.224  Sum_probs=74.3

Q ss_pred             CCCcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEe
Q 005110          318 GSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVS  397 (714)
Q Consensus       318 ~~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvs  397 (714)
                      +-...++..+....++++.++|..+-..---+-++||.|=||+..+.|-..+.-.+....++..|+||.|-|-|.|.|-+
T Consensus       817 d~P~~ap~~~~~~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~~~~~~~i~~~~~~~~ltgL~~~T~Y~~~vrA  896 (1051)
T KOG3513|consen  817 DEPPVAPTKLSAKPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINEKEGSLSRVQIAGNRTSWRLTGLEPNTKYRFYVRA  896 (1051)
T ss_pred             CCCCCCCccceeecccCceEEEEecCcCccCCccceeEEEEEEcCCCcccccceeecCCcceEeeeCCCCCceEEEEEEE
Confidence            33455667788889999999999865532227899999999999998877777778888899999999999999999999


Q ss_pred             ccCCccCcce
Q 005110          398 SNGTTELGRC  407 (714)
Q Consensus       398 F~~~~elg~~  407 (714)
                      +|..| .|..
T Consensus       897 ~nsaG-~Gp~  905 (1051)
T KOG3513|consen  897 YTSAG-GGPA  905 (1051)
T ss_pred             ecCCC-CCCC
Confidence            99999 7744

>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]

Probab=93.97  E-value=0.18  Score=62.39  Aligned_cols=88  Identities=22%  Similarity=0.272  Sum_probs=65.1

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc-cCc
Q 005110          327 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT-ELG  405 (714)
Q Consensus       327 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~-elg  405 (714)
                      +.--...++++.|......--.+.|+||+|.|-.....  .+  .-+-...+-..|.||.|-|||.|+||+|+..| -..
T Consensus       527 ~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~~~~~--~~--~~~~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~s  602 (1381)
T KOG4221|consen  527 LQAYATSPTTILVTWEPPPFGNGPITGYKLFYSEDDTG--KE--LRVENNATEYTINGLEKYTEYSIRVVAYNSAGSGVS  602 (1381)
T ss_pred             ccccccCcceEEEEecCCCCCCCCceEEEEEEEcCCCC--ce--EEEecCccEEEeecCCCccceEEEEEEecCCCCCCC
Confidence            44445667777777766654567899999999888322  11  11233467889999999999999999999988 567


Q ss_pred             ceeeEEecCcccc
Q 005110          406 RCEIWFSTGSSRD  418 (714)
Q Consensus       406 ~~E~k~~T~s~e~  418 (714)
                      ..++++.|-+..-
T Consensus       603 S~~i~V~Tlsd~P  615 (1381)
T KOG4221|consen  603 SADITVRTLSDVP  615 (1381)
T ss_pred             CCceEEEeccCCC
Confidence            8899999976433

>smart00249 PHD PHD zinc finger

Probab=93.96  E-value=0.059  Score=40.17  Aligned_cols=46  Identities=33%  Similarity=0.681  Sum_probs=34.9

Q ss_pred             eeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccCcceeEEeccC
Q 005110          142 CCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISC  206 (714)
Q Consensus       142 C~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~C  206 (714)
                      |.+|.+.+   ++-.||.|+        .|..|-|+.|+=....        .......|+|..|
T Consensus         2 C~~C~~~~---~~~~~i~C~--------~C~~~~H~~C~~~~~~--------~~~~~~~~~C~~C   47 (47)
T smart00249        2 CSVCGKPD---DGGELLQCD--------GCDRWYHQTCLGPPLL--------EEEPDGKWYCPKC   47 (47)
T ss_pred             cccCCCcC---CCCCEEECC--------CCCchhhhhhCCCccc--------CCCCCCCEECcCC
Confidence            67888876   678899999        9999999999633222        2345668899877

The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in epigenetics and chromatin-mediated transcriptional regulation. The PHD finger binds two zinc ions using the so-called 'cross-brace' motif and is thus structurally related to the

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=93.21  E-value=0.29  Score=58.80  Aligned_cols=88  Identities=23%  Similarity=0.295  Sum_probs=70.5

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc--
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT--  402 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~--  402 (714)
                      .-+|.+.++++||++-+...+.....|.-|-|=|+...+.  +.--.++..+.++..|.+|.|.|.|.|+|=+.|..|  
T Consensus       447 ~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~--e~~~~~~~t~~~~~ti~gL~p~t~YvfqVRarT~aG~G  524 (996)
T KOG0196|consen  447 SVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDED--ERSYSTLKTKTTTATITGLKPGTVYVFQVRARTAAGYG  524 (996)
T ss_pred             ceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccc--ccceeEEecccceEEeeccCCCcEEEEEEEEecccCCC
Confidence            4699999999999999999997767799999988887643  112236778889999999999999999999999865  


Q ss_pred             cCc-ceeeEEecC
Q 005110          403 ELG-RCEIWFSTG  414 (714)
Q Consensus       403 elg-~~E~k~~T~  414 (714)
                      -|+ ..|++..+.
T Consensus       525 ~~S~~~~fqT~~~  537 (996)
T KOG0196|consen  525 PYSGKHEFQTLPS  537 (996)
T ss_pred             CCCCceeeeecCc
Confidence            333 556666654

>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]

Probab=85.63  E-value=2.2  Score=52.94  Aligned_cols=76  Identities=28%  Similarity=0.335  Sum_probs=54.0

Q ss_pred             eEEEEEeeceeEEEEeCcCC-CCCCCcceEEEEeeecCCC-CCCCCceeeecCCc---eeEeecCCcceeeeEEEEeccC
Q 005110          326 MVKFEDVRATSLTVVLGSED-PSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNT---RFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~---r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      .+..++|+++++.|-..-.. .-+. |.+|.+=.|-..-. .-. -+ +++--.+   ...|-||.|=+||.|||++++.
T Consensus       620 ~v~~~~i~~t~~~lsW~~g~dn~Sp-I~~Y~iq~rt~~~~~W~~-v~-~vp~~~~~~~sa~vv~L~Pwv~YeFRV~AvN~  696 (1051)
T KOG3513|consen  620 DVHVDDISDTTARLSWSPGSDNNSP-IEKYTIQFRTPFPGKWKA-VT-TVPGNITGDESATVVNLSPWVEYEFRVVAVNS  696 (1051)
T ss_pred             ceeEeeeccceEEEEeecCCCCCCC-ceEEeEEecCCCCCcceE-ee-ECCCcccCccceeEEccCCCcceEEEEEEEcc
Confidence            79999999999999888775 4344 99999866654332 111 11 2222222   4778999999999999999998


Q ss_pred             CccC
Q 005110          401 TTEL  404 (714)
Q Consensus       401 ~~el  404 (714)
                      .|.=
T Consensus       697 iG~g  700 (1051)
T KOG3513|consen  697 IGIG  700 (1051)
T ss_pred             cccC
Confidence            7643

>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=84.92  E-value=0.17  Score=39.81  Aligned_cols=48  Identities=31%  Similarity=0.719  Sum_probs=34.5

Q ss_pred             eeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccCcceeEEeccCC
Q 005110          142 CCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCR  207 (714)
Q Consensus       142 C~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cg  207 (714)
                      |.||.+   ..+...||.|+        .|+.|-|+.|.--....-..       .+..|+|..|-
T Consensus         2 C~vC~~---~~~~~~~i~C~--------~C~~~~H~~C~~~~~~~~~~-------~~~~w~C~~C~   49 (51)
T PF00628_consen    2 CPVCGQ---SDDDGDMIQCD--------SCNRWYHQECVGPPEKAEEI-------PSGDWYCPNCR   49 (51)
T ss_dssp             BTTTTS---SCTTSSEEEBS--------TTSCEEETTTSTSSHSHHSH-------HSSSBSSHHHH
T ss_pred             CcCCCC---cCCCCCeEEcC--------CCChhhCcccCCCChhhccC-------CCCcEECcCCc
Confidence            678888   45588999999        99999999997554442222       22278887763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the PHD (homeodomain) zinc finger domain [,], which is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in chromatin-mediated transcriptional regulation. The PHD finger motif is reminiscent of, but distinct from the C3HC4 type RING finger. The function of this domain is not yet known but in analogy with the LIM domain it could be involved in protein-protein interaction and be important for the assembly or activity of multicomponent complexes involved in transcriptional activation or repression. Alternatively, the interactions could be intra-molecular and be important in maintaining the structural integrity of the protein. In similarity to the RING finger and the LIM domain, the PHD finger is thought to bind two zinc ions. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0005515 protein binding; PDB: 3ZVY_A 2LGG_A 3SOW_A 3SOU_B 3ASL_A 3ASK_A 3ZVZ_B 3T6R_A 2LGK_A 3SOX_B ....

>PF07498 Rho_N: Rho termination factor, N-terminal domain; InterPro: IPR011112 The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts

Probab=82.16  E-value=2.2  Score=33.57  Aligned_cols=39  Identities=36%  Similarity=0.514  Sum_probs=32.1

Q ss_pred             hchhcHHHHHHHHHHHhCCcccccCcchHHHHHHHHhhhcc
Q 005110           22 LRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLVSE   62 (714)
Q Consensus        22 LqswsR~Eil~ilcAe~gkERKytgltK~k~ie~Llk~vs~   62 (714)
                      |+++|..||.+ |+.++|-+ -|+++.|..+|..|++.-++
T Consensus         2 L~~~~~~eL~~-iAk~lgI~-~~~~~~K~eLI~~Il~~q~~   40 (43)
T PF07498_consen    2 LKSMTLSELRE-IAKELGIE-GYSKMRKQELIFAILKAQAE   40 (43)
T ss_dssp             HHCS-HHHHHH-HHHCTT-T-TGCCS-HHHHHHHHHHHHCT
T ss_pred             cccCCHHHHHH-HHHHcCCC-CCCcCCHHHHHHHHHHHHHH
Confidence            78889999988 89999998 58999999999999998875

It is thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers []. This domain is found to the N terminus of the RNA binding domain (IPR011113 from INTERPRO).; GO: 0006353 transcription termination, DNA-dependent; PDB: 1A8V_B 1PVO_A 1PV4_D 3ICE_A 1XPU_C 1XPO_D 1XPR_F 2A8V_B 2HT1_B 1A63_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	714
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	1e-09
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	1e-09
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	1e-09
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	2e-09
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	1e-08
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	2e-08
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	2e-08
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	2e-08
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	5e-08
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	6e-08
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	9e-08
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	1e-07
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	6e-07
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	9e-06
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	1e-07
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	2e-07
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	3e-06
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	2e-07
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	2e-07
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	1e-06
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	5e-05
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	2e-07
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	1e-05
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	3e-07
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	4e-07
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	1e-05
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	5e-07
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	5e-07
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	2e-06
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	2e-06
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	3e-05
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	6e-07
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	8e-07
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	9e-07
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	3e-06
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	1e-05
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	2e-06
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	3e-06
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	3e-06
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	4e-06
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	4e-06
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	5e-06
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	5e-06
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	7e-06
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	7e-06
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	8e-06
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	8e-06
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	8e-06
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	1e-05
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	1e-05
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	1e-05
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	2e-05
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	4e-05
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	2e-05
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	2e-05
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	2e-05
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	9e-05
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	2e-05
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	3e-05
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	1e-04
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	3e-05
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	3e-05
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	3e-05
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	3e-05
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	4e-05
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	5e-05
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	5e-05
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	7e-05
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	8e-05
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	8e-05
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	1e-04
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	1e-04
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	1e-04
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	1e-04
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	1e-04
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	1e-04
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	2e-04
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	2e-04
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	3e-04
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	3e-04
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	3e-04
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	4e-04
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	4e-04
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	4e-04
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	5e-04
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	7e-04
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	8e-04

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 4/94 (4%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +K  ++  T+  V   +  P    I    +             T  L +  T   +T
Sbjct: 5   PFNIKVTNITLTTAVV---TWQPPILPIEGILV-TFGRKNDPSDETTVDLTSSITSLTLT 60

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSR 417
            L P T Y+ ++V+ NG          F+TGS  
Sbjct: 61  NLEPNTTYEIRIVARNGQQYSPPVSTTFTTGSLE 94

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121

 Score = 55.7 bits (134), Expect = 1e-09
 Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 4/90 (4%)

Query: 312 PNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTC 371
            N   QGS   VP  ++      TSL +   S D     +  Y + +       P +   
Sbjct: 20  ENLYFQGSVSDVPTKLEVVAATPTSLLI---SWDAPAVTVRYYRITYGETGGNSPVQ-EF 75

Query: 372 TLFAPNTRFVVTGLCPATEYQFKVVSSNGT 401
           T+    +   ++GL P  +Y   V +  G 
Sbjct: 76  TVPGSKSTATISGLKPGVDYTITVYAVTGL 105

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94

 Score = 54.7 bits (132), Expect = 1e-09
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 4/80 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  + F DV   S+ +   + +   G +  Y + +    +G                 + 
Sbjct: 5   PKGLAFTDVDVDSIKI---AWESPQGQVSRYRVTYSSPEDGIH-ELFPAPDGEEDTAELQ 60

Query: 384 GLCPATEYQFKVVSSNGTTE 403
           GL P +EY   VV+ +   E
Sbjct: 61  GLRPGSEYTVSVVALHDDME 80

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98

 Score = 54.0 bits (130), Expect = 2e-09
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 4/77 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  ++  +V  TS+TV   S  P    I  Y + +  ++ G       T+   +T   +T
Sbjct: 5   PTDLQVTNVTDTSITV---SWTPPSATITGYRITYTPSN-GPGEPKELTVPPSSTSVTIT 60

Query: 384 GLCPATEYQFKVVSSNG 400
           GL P  EY   V +   
Sbjct: 61  GLTPGVEYVVSVYALKD 77

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104

 Score = 52.4 bits (126), Expect = 1e-08
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P+ ++ +DV  T+  +   +  P    +  + L +           T  L     ++ + 
Sbjct: 6   PSQIEVKDVTDTTALI---TWMPPSQPVDGFELTYGIKDVPGDRT-TIDLTEDENQYSIG 61

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFSTG 414
            L P TEY+  ++S  G       +  F+TG
Sbjct: 62  NLKPDTEYEVSLISRRGDMSSNPAKETFTTG 92

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 4/94 (4%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +   +V   SL +   S         S+ + ++ + +   A    T+      + +T
Sbjct: 5   PKNLVVSEVTEDSLRL---SWTAPDAAFDSFMIQYQESEKVGEAINL-TVPGSERSYDLT 60

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSR 417
           GL P TEY   +    G          F+TG   
Sbjct: 61  GLKPGTEYTVSIYGVKGGHRSNPLSAEFTTGGHH 94

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 12/80 (15%), Positives = 24/80 (30%), Gaps = 5/80 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  + F DV   +  V     + +P  +    + +  +  G             T  ++ 
Sbjct: 11  PRHLGFSDVSHDAARV---FWEGAPRPVRLVRVTYVSSEGGHS--GQTEAPGNATSAMLG 65

Query: 384 GLCPATEYQFKVVSSNGTTE 403
            L  +T Y  +V        
Sbjct: 66  PLSSSTTYTVRVTCLYPGGG 85

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 4/77 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P+ +        SL V   S  P  G ++ Y L +  A    P +   ++    +   + 
Sbjct: 11  PSNLALASETPDSLQV---SWTPPLGRVLHYWLTYAPASGLGPEKSV-SVPGARSHVTLP 66

Query: 384 GLCPATEYQFKVVSSNG 400
            L  AT+Y+  V +   
Sbjct: 67  DLQAATKYRVLVSAIYA 83

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97

 Score = 50.1 bits (120), Expect = 5e-08
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           VP  ++      TSL +   S D S  ++  Y + +       P +   T+   ++   +
Sbjct: 7   VPTKLEVVAATPTSLLI---SWDASSSSVSYYRITYGETGGNSPVQEF-TVPGSSSTATI 62

Query: 383 TGLCPATEYQFKVVSSNG 400
           +GL P  +Y   V +   
Sbjct: 63  SGLSPGVDYTITVYAYYS 80

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114

 Score = 50.7 bits (121), Expect = 6e-08
 Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 4/83 (4%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           VP  ++      TSL +   S D   G+   Y + +       P +   T+  P     +
Sbjct: 6   VPRDLEVVAATPTSLLI---SWDSGRGSYQYYRITYGETGGNSPVQEF-TVPGPVHTATI 61

Query: 383 TGLCPATEYQFKVVSSNGTTELG 405
           +GL P  +Y   V +        
Sbjct: 62  SGLKPGVDYTITVYAVTDHKPHA 84

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 50.1 bits (120), Expect = 9e-08
 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 324 PNMVKFEDVRATSLTV--VLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFV 381
           P  V    V    + +     + DP  G+ ++Y++++ +       R   T      +  
Sbjct: 21  PRDVVASLVSTRFIKLTWRTPASDP-HGDNLTYSVFYTKEGIA-RERVENTSHPGEMQVT 78

Query: 382 VTGLCPATEYQFKVVSSN 399
           +  L PAT Y F+V++ N
Sbjct: 79  IQNLMPATVYIFRVMAQN 96

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 4/77 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P+ ++F      SL V   S  P    I  Y + + +     P           T   +T
Sbjct: 205 PSNLRFLATTPNSLLV---SWQPPRARITGYIIKYEKP-GSPPREVVPRPRPGVTEATIT 260

Query: 384 GLCPATEYQFKVVSSNG 400
           GL P TEY   V++   
Sbjct: 261 GLEPGTEYTIYVIALKN 277

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 51.0 bits (122), Expect = 6e-07
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +KF  V  TSL+       P    +  Y +      +  P      L   ++  VV+
Sbjct: 24  PTDLKFTQVTPTSLSA---QWTPPNVQLTGYRVRVTPKEKTGP-MKEINLAPDSSSVVVS 79

Query: 384 GLCPATEYQFKVVSSNG 400
           GL  AT+Y+  V +   
Sbjct: 80  GLMVATKYEVSVYALKD 96

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 47.1 bits (112), Expect = 9e-06
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P   +  D   T++T+   S       I  + +    A+   P + T         + +T
Sbjct: 116 PRRARVTDATETTITI---SWRTKTETITGFQVDAVPANGQTPIQRTIK--PDVRSYTIT 170

Query: 384 GLCPATEYQFKVVSSNG 400
           GL P T+Y+  + + N 
Sbjct: 171 GLQPGTDYKIYLYTLND 187

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 324 PNMVKFEDVRATSLTVVLGS--EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFV 381
           P  + F  +  TSL V   S  E      +  Y++ ++  + G             T  V
Sbjct: 21  PTRLVFSALGPTSLRV---SWQEPRCERPLQGYSVEYQLLNGG-ELHRLNIPNPAQTSVV 76

Query: 382 VTGLCPATEYQFKVVSSN 399
           V  L P   Y F+V + +
Sbjct: 77  VEDLLPNHSYVFRVRAQS 94

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 51.2 bits (122), Expect = 2e-07
 Identities = 14/119 (11%), Positives = 32/119 (26%), Gaps = 7/119 (5%)

Query: 282 VNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVL 341
           + +       +        S     +               V       ++ A+S  V  
Sbjct: 76  IQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPL---VATSESVTEITASSFVV-- 130

Query: 342 GSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG 400
            S   +   +  + + +  + EG   +    L +  T   +  L P  +Y   V   + 
Sbjct: 131 -SWVSASDTVSGFRVEYELSEEGDEPQYL-DLPSTATSVNIPDLLPGRKYIVNVYQISE 187

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 47.7 bits (113), Expect = 3e-06
 Identities = 25/159 (15%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           V   +     +  S  +   +  P P +I  Y L  R  +     +   T+      + +
Sbjct: 4   VEVFITETPSQPNSHPIQWNA--PQPSHISKYILRWRPKNSVGRWK-EATIPGHLNSYTI 60

Query: 383 TGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNP 442
            GL P   Y+ +++S             F+T S+   VT         +  T  ++  +P
Sbjct: 61  KGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVT--------SNTVTGETTPFSP 112

Query: 443 SSVEDET-NNVTPDR-----DPNDAQVNNYY-TYSKETD 474
                E+   +T              V+ +   Y    +
Sbjct: 113 LVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEE 151

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 49.0 bits (117), Expect = 2e-07
 Identities = 16/111 (14%), Positives = 31/111 (27%), Gaps = 8/111 (7%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  ++  ++      +      P    + +Y +       G P             + + 
Sbjct: 11  PTQLRALNLTEGFAVL---HWKPPQNPVDTYDIQVT--APGAPPL-QAETPGSAVDYPLH 64

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPAT 434
            L   T Y   V    G        I F+TG   +   +    E + S  +
Sbjct: 65  DLVLHTNYTATVRGLRGPNLTSPASITFTTGL--EAPRDLEAKEVTPSGPS 113

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 6/80 (7%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +       TS+++       + G I  Y +    +          T+    T + +T
Sbjct: 200 PRDLMVTASSETSISL---IWTKASGPIDHYRITFTPSSGI---SSEVTVPRDRTSYTLT 253

Query: 384 GLCPATEYQFKVVSSNGTTE 403
            L P  EY   + +  G  +
Sbjct: 254 DLEPGAEYIISITAERGRQQ 273

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 6/108 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +   DV  T   V      P    +    L +     G   + T  L  P +++ V 
Sbjct: 18  PTQILVRDVSDTVAFV---EWTPPRAKVDFILLKYGLVG-GEGGKTTFRLQPPLSQYSVQ 73

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQS 431
            L P + Y+  + +  GT E       F+T    D   N  V  R+ +
Sbjct: 74  ALRPGSRYEVSISAVRGTNESDASSTQFTTEI--DAPKNLRVGSRTAT 119

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 44.8 bits (106), Expect = 5e-05
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 4/81 (4%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTL-WHRRAHEGFPARPTCTLFAPNTRFVV 382
           P  ++     ATSL +     D S      Y + +   A E +          P T+  +
Sbjct: 108 PKNLRVGSRTATSLDL---EWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTL 164

Query: 383 TGLCPATEYQFKVVSSNGTTE 403
           T L P TEY   + +   + +
Sbjct: 165 TDLVPGTEYGVGISAVMNSKQ 185

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 21/109 (19%), Positives = 35/109 (32%), Gaps = 7/109 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           P  + F D+  +S+ +        +   II Y +    A EG P      + +    + V
Sbjct: 26  PTDLSFVDITDSSIGL---RWTPLNSSTIIGYRITVVAAGEGIPIF-EDFVDSSVGYYTV 81

Query: 383 TGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQS 431
           TGL P  +Y   V +     E     +   T       T+         
Sbjct: 82  TGLEPGIDYDISVYTVKNGGESTPTTLTQQTAV--PPPTDLRFTNIGPD 128

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           P  ++F ++   ++ V   +   P   ++ ++ + +             ++   +   V+
Sbjct: 117 PTDLRFTNIGPDTMRV---TWAPPPSIDLTNFLVRYSPVKNEEDVAEL-SISPSDNAVVL 172

Query: 383 TGLCPATEYQFKVVSSNGTTE 403
           T L P TEY   V S     E
Sbjct: 173 TNLLPGTEYVVSVSSVYEQHE 193

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 7/77 (9%)

Query: 324 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           P   K E    TS+ +   S   P    I +Y L ++    G   R T     P T + +
Sbjct: 21  PLNFKAEPESETSILL---SWTPPRSDTIANYELVYKDGEHGEEQRIT---IEPGTSYRL 74

Query: 383 TGLCPATEYQFKVVSSN 399
            GL P + Y F++ + +
Sbjct: 75  QGLKPNSLYYFRLAARS 91

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  + F D+   S TV   S  P    + SY + +     G P     T+    TR  + 
Sbjct: 98  PKGISFSDITENSATV---SWTPPRSRVDSYRVSYVPITGGTPN--VVTVDGSKTRTKLV 152

Query: 384 GLCPATEYQFKVVSSNG 400
            L P  +Y   ++S  G
Sbjct: 153 KLVPGVDYNVNIISVKG 169

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 8/108 (7%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  ++  D   T+L++              Y L +         +    +   +T F++ 
Sbjct: 10  PKDLEVSDPTETTLSL---RWRRPVAKFDRYRLTYVSPSGK---KNEMEIPVDSTSFILR 63

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQS 431
           GL   TEY   +V+  G  +     I  ST          S  + +++
Sbjct: 64  GLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGS--PKGISFSDITEN 109

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 47.8 bits (114), Expect = 5e-07
 Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 6/94 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  ++ ++V   +  +   +    P     Y L                L    T   + 
Sbjct: 11  PRDLEAKEVTPRTALL---TWTEPPVRPAGYLLSFHTPGG---QTQEILLPGGITSHQLL 64

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSR 417
           GL P+T Y  ++ +  G + L      F+TG  R
Sbjct: 65  GLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGLR 98

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 51.4 bits (123), Expect = 5e-07
 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 4/77 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  + F D+ A S TV           I  Y + H   H     R    +        +T
Sbjct: 189 PTGIDFSDITANSFTV---HWIAPRATITGYRIRHHPEHFSGRPRED-RVPHSRNSITLT 244

Query: 384 GLCPATEYQFKVVSSNG 400
            L P TEY   +V+ NG
Sbjct: 245 NLTPGTEYVVSIVALNG 261

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 49.8 bits (119), Expect = 2e-06
 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 4/78 (5%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           VP  ++      TSL +   S D     +  Y + +       P +   T+    +   +
Sbjct: 278 VPRDLEVVAATPTSLLI---SWDAPAVTVRYYRITYGETGGNSPVQEF-TVPGSKSTATI 333

Query: 383 TGLCPATEYQFKVVSSNG 400
           +GL P  +Y   V +  G
Sbjct: 334 SGLKPGVDYTITVYAVTG 351

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 49.4 bits (118), Expect = 2e-06
 Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 1/80 (1%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +  E    T   + +  E  +  +I  Y +     +          + A  +     
Sbjct: 5   PTNLHLEANPDTG-VLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFD 63

Query: 384 GLCPATEYQFKVVSSNGTTE 403
            L P  EY   V +     E
Sbjct: 64  NLSPGLEYNVSVYTVKDDKE 83

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 46.0 bits (109), Expect = 3e-05
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           P  ++F ++   ++ V   +   P   ++ ++ + +             ++   +   V+
Sbjct: 98  PTDLRFTNIGPDTMRV---TWAPPPSIDLTNFLVRYSPVKNEEDVAEL-SISPSDNAVVL 153

Query: 383 TGLCPATEYQFKVVSSNGTTE 403
           T L P TEY   V S     E
Sbjct: 154 TNLLPGTEYVVSVSSVYEQHE 174

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A Length = 95

 Score = 47.1 bits (112), Expect = 6e-07
 Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 4/82 (4%)

Query: 322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFV 381
           +V       ++ A+S  V   S   +   +  + + +  + EG   +    L +  T   
Sbjct: 7   LVATSESVTEITASSFVV---SWVSASDTVSGFRVEYELSEEGDEPQYL-DLPSTATSVN 62

Query: 382 VTGLCPATEYQFKVVSSNGTTE 403
           +  L P  +Y   V   +   E
Sbjct: 63  IPDLLPGRKYIVNVYQISEDGE 84

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 51.0 bits (122), Expect = 8e-07
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
              + F D+  +S+ +        +   II Y +    A EG P      + +    + V
Sbjct: 99  LTDLSFVDITDSSIGL---RWTPLNSSTIIGYRITVVAAGEGIPIFED-FVDSSVGYYTV 154

Query: 383 TGLCPATEYQFKVVSSNGTTE 403
           TGL P  +Y   V++     E
Sbjct: 155 TGLEPGIDYDISVITLINGGE 175

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 50.6 bits (121), Expect = 9e-07
 Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 4/80 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  + F D+ A S TV           I  Y + H   H     R    +        +T
Sbjct: 281 PTGIDFSDITANSFTV---HWIAPRATITGYRIRHHPEHFSGRPRED-RVPHSRNSITLT 336

Query: 384 GLCPATEYQFKVVSSNGTTE 403
            L P TEY   +V+ NG  E
Sbjct: 337 NLTPGTEYVVSIVALNGREE 356

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 49.0 bits (117), Expect = 3e-06
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           P  ++F ++   ++ V   +   P   ++ ++ + +             ++   +   V+
Sbjct: 190 PTDLRFTNIGPDTMRV---TWAPPPSIDLTNFLVRYSPVKNEEDVAEL-SISPSDNAVVL 245

Query: 383 TGLCPATEYQFKVVSSNGTTE 403
           T L P TEY   V S     E
Sbjct: 246 TNLLPGTEYVVSVSSVYEQHE 266

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 3/108 (2%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +  E    T   + +  E  +  +I  Y +     +          + A  +     
Sbjct: 6   PTNLHLEANPDTG-VLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFD 64

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQS 431
            L P  EY   V +     E               ++T+ S ++ + S
Sbjct: 65  NLSPGLEYNVSVYTVKDDKESVPISDTIIPEV--PQLTDLSFVDITDS 110

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSP----GNIISYTLWHRRAHEGFPARPTCTLFAPNTR 379
           P  + F +VR TS+ +      P P    G I++Y + HR             L     +
Sbjct: 31  PMGILFPEVRTTSVRL---IWQP-PAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQ 86

Query: 380 FVVTGLCPATEYQFKVVSSN 399
           +  TGL P + Y F++ +  
Sbjct: 87  YTATGLKPESVYLFRITAQT 106

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 5/77 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P     +   +  +     +  P  G  + Y + +    +G        L +      +T
Sbjct: 9   PQNPNAKAAGSRKIHF---NWLPPSGKPMGYRVKYWI--QGDSESEAHLLDSKVPSVELT 63

Query: 384 GLCPATEYQFKVVSSNG 400
            L P  +Y+ KV +   
Sbjct: 64  NLYPYCDYEMKVCAYGA 80

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 6/80 (7%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRF 380
           VP  ++      TSL +   S D   S  ++  Y + +       P +   T+   ++  
Sbjct: 7   VPTKLEVVAATPTSLLI---SWDAPMSSSSVYYYRITYGETGGNSPVQ-EFTVPYSSSTA 62

Query: 381 VVTGLCPATEYQFKVVSSNG 400
            ++GL P  +Y   V +   
Sbjct: 63  TISGLSPGVDYTITVYAWGE 82

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 17/95 (17%)

Query: 307 SNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-- 364
           S +  P P         P  +   +  ATS  V L  +  +   +  Y + +R A     
Sbjct: 3   SGSSGPKP---------PIDLVVTETTATS--VTLTWDSGNSEPVTYYGIQYRAAGTEGP 51

Query: 365 FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN 399
           F            TR+ + GL P +EY F+V++ N
Sbjct: 52  FQEVDGV----ATTRYSIGGLSPFSEYAFRVLAVN 82

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 45.5 bits (108), Expect = 4e-06
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 9/80 (11%)

Query: 324 PNMVKFEDVRATSLTVVLGS----EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTR 379
           P  V    V +  + +   S     +   GNI ++T++  R  +    R   T    + +
Sbjct: 21  PRDVVPVLVSSRFVRL---SWRPPAEAK-GNIQTFTVFFSREGDN-RERALNTTQPGSLQ 75

Query: 380 FVVTGLCPATEYQFKVVSSN 399
             V  L P   Y F+VV+ N
Sbjct: 76  LTVGNLKPEAMYTFRVVAYN 95

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           VP  ++  D   TSL +   +   S  N+  Y + +       P +   T+    +   +
Sbjct: 10  VPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ-EFTVPGYYSTATI 68

Query: 383 TGLCPATEYQFKVVSSNG 400
           +GL P  +Y   V + + 
Sbjct: 69  SGLKPGVDYTITVYAYDT 86

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
            + ++      +SL++         G ++ Y + +       P+     L     R  + 
Sbjct: 11  VSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSS-VRFLKTSENRAELR 69

Query: 384 GLCPATEYQFKV 395
           GL     Y  +V
Sbjct: 70  GLKRGASYLVQV 81

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} Length = 114

 Score = 44.8 bits (106), Expect = 7e-06
 Identities = 8/75 (10%), Positives = 24/75 (32%), Gaps = 5/75 (6%)

Query: 327 VKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTG 384
           +  +     S  + +       G   I+ Y + +R   +         +       ++  
Sbjct: 14  IHGQPSSGKSFKLSI--TKQDDGGAPILEYIVKYRSKDKEDQ-WLEKKVQGNKDHIILEH 70

Query: 385 LCPATEYQFKVVSSN 399
           L     Y+ ++ ++N
Sbjct: 71  LQWTMGYEVQITAAN 85

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 44.6 bits (106), Expect = 7e-06
 Identities = 15/79 (18%), Positives = 23/79 (29%), Gaps = 10/79 (12%)

Query: 324 PNMVKFEDVRATSLTVVLGS-EDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRF 380
               +     AT   V   + E P      +  Y L                   P   +
Sbjct: 11  CKPPQVTCRSATCAQV---NWEVPLSNGTDVTEYRLEWGGVEGSM----QICYCGPGLSY 63

Query: 381 VVTGLCPATEYQFKVVSSN 399
            + GL PAT Y  +V + +
Sbjct: 64  EIKGLSPATTYYCRVQALS 82

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 44.8 bits (106), Expect = 8e-06
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 5/74 (6%)

Query: 332 VRATSLTVVLGSEDP-SPGN--IISYTLWHRRAHEGFPARPTCTLFAP--NTRFVVTGLC 386
           V   S T  +  ++P + G   I+ Y    R   E                    + GL 
Sbjct: 16  VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLK 75

Query: 387 PATEYQFKVVSSNG 400
           P T Y  ++ + NG
Sbjct: 76  PETTYAVRLAALNG 89

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 44.3 bits (105), Expect = 8e-06
 Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 318 GSNVIVPNMVKFEDVRATSLTVVLGSEDP-SPGN--IISYTLWHRRAHEGFPARPTCTLF 374
           GS++  P+    + V   S T  +  ++P + G   I+ Y    R   E           
Sbjct: 1   GSHMDTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK 60

Query: 375 APN--TRFVVTGLCPATEYQFKVVSSNG 400
             +      + GL P T Y  ++ + NG
Sbjct: 61  EASMEGIVTIVGLKPETTYAVRLAALNG 88

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score = 46.2 bits (110), Expect = 8e-06
 Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 6/86 (6%)

Query: 316 VQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTL 373
           VQ     VPN  K   +   +    +  E        I+ YT+    +            
Sbjct: 2   VQD----VPNAPKLTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK 57

Query: 374 FAPNTRFVVTGLCPATEYQFKVVSSN 399
                   V  + P   Y F+V++ N
Sbjct: 58  VPNTDSSFVVQMSPWANYTFRVIAFN 83

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 127

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 4/78 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRFV 381
           P  ++  D    S  V L        N  I  + + +  A          T  +      
Sbjct: 20  PFDLELTDQLDKS--VQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTA 77

Query: 382 VTGLCPATEYQFKVVSSN 399
              L P   Y F+V++ N
Sbjct: 78  QLNLSPYVNYSFRVMAVN 95

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 13/71 (18%), Positives = 18/71 (25%), Gaps = 7/71 (9%)

Query: 331 DVRATSLTVV--LGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPA 388
                S T+          P     Y L     + G             T   V GL   
Sbjct: 21  CTHNNSATLSWKQPPLSTVP--ADGYILELDDGNGGQFREVYVG---KETMCTVDGLHFN 75

Query: 389 TEYQFKVVSSN 399
           + Y  +V + N
Sbjct: 76  STYNARVKAFN 86

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 118

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 6/79 (7%)

Query: 323 VPNMVKFEDVRATSLTVV--LGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRF 380
           +PN  +  +    SLT+     S++ S   I ++ L                      +F
Sbjct: 20  IPNPPRIANRTKNSLTLQWKAPSDNGSK--IQNFVLEWDEGKGNGEFCQCYM--GSQKQF 75

Query: 381 VVTGLCPATEYQFKVVSSN 399
            +T L PA   +F++ + N
Sbjct: 76  KITKLSPAMGCKFRLSARN 94

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 324 PNMVKFEDVRATSLTV----VLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTR 379
           P  V+   +   ++ +        +     +   YT+  +               A    
Sbjct: 8   PVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNAN--ATTLS 65

Query: 380 FVVTGLCPATEYQFKVVSSNG 400
           ++VTGL P T Y+F V+ + G
Sbjct: 66  YLVTGLKPNTLYEFSVMVTKG 86

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 3/79 (3%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSP--GNIISYTLWHRRAHEGFPARPTCTLFAPN-TRF 380
           P  V          T+++  + PS   G I  Y +++                  N    
Sbjct: 109 PKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTH 168

Query: 381 VVTGLCPATEYQFKVVSSN 399
            +  L   T Y FK+ + N
Sbjct: 169 QIQELTLDTPYYFKIQARN 187

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 13/87 (14%), Positives = 24/87 (27%), Gaps = 10/87 (11%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTC-------TLFAP 376
            + +   DV  +SL +   + +  PG   S+ L                       +   
Sbjct: 12  LSQLSVTDVTTSSLRL---NWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGT 68

Query: 377 NTRFVVTGLCPATEYQFKVVSSNGTTE 403
               V+  L   T Y   +    G  +
Sbjct: 69  RHSAVLRDLRSGTLYSLTLYGLRGPHK 95

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 4/79 (5%)

Query: 323 VPN--MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRF 380
            P    +        +  +        PG ++ Y L + RA E  P   T      +  F
Sbjct: 7   GPGRPTMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPN--TIDFGKDDQHF 64

Query: 381 VVTGLCPATEYQFKVVSSN 399
            VTGL   T Y F++ + N
Sbjct: 65  TVTGLHKGTTYIFRLAAKN 83

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score = 46.7 bits (110), Expect = 2e-05
 Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 6/84 (7%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP------TCTLFAP 376
           VP            + +       + G I  Y + ++      P           +    
Sbjct: 465 VPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGN 524

Query: 377 NTRFVVTGLCPATEYQFKVVSSNG 400
            T F+  GL P T Y F + +S  
Sbjct: 525 ETHFLFFGLYPGTTYSFTIRASTA 548

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score = 44.8 bits (105), Expect = 9e-05
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 5/77 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSP-GNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
               +   V AT L + L +   +  G I++  + +  A   +  R        +T + +
Sbjct: 265 IAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQP----VDSTSYKI 320

Query: 383 TGLCPATEYQFKVVSSN 399
             L P TEY+  V+ + 
Sbjct: 321 GHLDPDTEYEISVLLTR 337

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 8/76 (10%), Positives = 23/76 (30%), Gaps = 4/76 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P+ +         + +           +  Y + +     G P   T  + +    + + 
Sbjct: 21  PSSLHVRPQ-TNCIIMSWTPPLNPNIVVRGYIIGYG---VGSPYAETVRVDSKQRYYSIE 76

Query: 384 GLCPATEYQFKVVSSN 399
            L  ++ Y   + + N
Sbjct: 77  RLESSSHYVISLKAFN 92

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 46.5 bits (109), Expect = 3e-05
 Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 11/116 (9%)

Query: 289 PEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSP 348
             V+K C+       ++        P            ++F ++++  L V   S+    
Sbjct: 135 SGVKKCCSNGCGHTCQVPKTLYKGVPLKP------RKELRFTELQSGQLEVKWSSKFNIS 188

Query: 349 GNIISYTLWHRRAHEGFPARPTCTLF-----APNTRFVVTGLCPATEYQFKVVSSN 399
              + Y +  R  +   P+    T +       + R  +T + P+  YQF+V + N
Sbjct: 189 IEPVIYVVQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVN 244

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 44.2 bits (103), Expect = 1e-04
 Identities = 16/143 (11%), Positives = 39/143 (27%), Gaps = 5/143 (3%)

Query: 308 NTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRR---AHEG 364
             I      Q      P  V     +   L V +  +      +  Y +       AH  
Sbjct: 389 GGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPTVNRYHVRWFPEACAHNR 448

Query: 365 FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRD--EVTN 422
                  +        ++  L  + +Y+  V      +      ++F+T         ++
Sbjct: 449 TTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSH 508

Query: 423 CSVIERSQSPATNCSSLSNPSSV 445
             +    ++       L+ P ++
Sbjct: 509 KPIGCLGEAGHVLSKVLAKPENL 531

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 13/89 (14%), Positives = 26/89 (29%), Gaps = 15/89 (16%)

Query: 324 PNMVKFEDVRATSLTVV--LGSEDPSPGNIISYTL----------WHRRAHEGFPARPTC 371
           P       +   S+ +   +   D  P  I+ + +          W          +P  
Sbjct: 5   PTPPNVTRLSDESVMLRWMVPRNDGLP--IVIFKVQYRMVGKRKNWQTTNDNIPYGKPKW 62

Query: 372 TLFAPN-TRFVVTGLCPATEYQFKVVSSN 399
                      VT L P   Y+F++++  
Sbjct: 63  NSELGKSFTASVTDLKPQHTYRFRILAVY 91

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 324 PNMVKFEDVRATSLTVV-LGSEDPSPGNIISYTLWHRR--AHEGFPARPTCTLFAPNTRF 380
           P ++  + V  T++T+     +      +  Y L +      +   A          T+F
Sbjct: 11  PTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLI---DKTKF 67

Query: 381 VVTGLCPATEYQFKVVSSN 399
            +TGL    +   +V + N
Sbjct: 68  TITGLPTDAKIFVRVKAVN 86

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDP---SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRF 380
             +++ E    TS+++            G I+ Y + +    +   +    TL A  TR 
Sbjct: 14  VVVIRQERAGQTSVSL---LWQEPEQPNGIILEYEIKYYEKDKEMQS--YSTLKAVTTRA 68

Query: 381 VVTGLCPATEYQFKVVSSN 399
            V+GL P T Y F+V +  
Sbjct: 69  TVSGLKPGTRYVFQVRART 87

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 3/77 (3%)

Query: 324 PNMVKFEDVRATSLTVV-LGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           P          T L++             ISY L       G+  +P       +  + V
Sbjct: 11  PASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDG--EDLAYTV 68

Query: 383 TGLCPATEYQFKVVSSN 399
             L  +T+Y+FKV++ N
Sbjct: 69  KNLRRSTKYKFKVIAYN 85

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
              + F ++  TSL V         G +  Y +     +     R T  L      + VT
Sbjct: 21  VGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT-RVTHYLPNVTLEYRVT 79

Query: 384 GLCPATEYQFKVVSSN 399
           GL   T Y  +V +  
Sbjct: 80  GLTALTTYTIEVAAMT 95

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 2/76 (2%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P +         S+ V L  +D     I  Y + +R     +  +P   L + +   ++ 
Sbjct: 113 PKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEW--KPEIRLPSGSDHVMLK 170

Query: 384 GLCPATEYQFKVVSSN 399
            L    EY+  VV+ N
Sbjct: 171 SLDWNAEYEVYVVAEN 186

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 41.7 bits (98), Expect = 5e-05
 Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +    V   ++ +   +  PS G    Y +    A           +       ++ 
Sbjct: 12  PRALTLAAVTPRTVHL---TWQPSAG-ATHYLVRCSPASPKGEEEER-EVQVGRPEVLLD 66

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSS 416
           GL P  +Y+  V S  G        I   T +S
Sbjct: 67  GLEPGRDYEVSVQSLRGPEGSEARGIRARTPTS 99

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 41.7 bits (98), Expect = 7e-05
 Identities = 12/77 (15%), Positives = 24/77 (31%), Gaps = 3/77 (3%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           VP  +        S+T+     +   G I+ Y + +           +    +      +
Sbjct: 11  VPI-MHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFN--SSMARSQTNTARI 67

Query: 383 TGLCPATEYQFKVVSSN 399
            GL P   Y  +V +  
Sbjct: 68  DGLRPGMVYVVQVRART 84

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 324 PNMVKFEDVRATSLTVV-LGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           P  +K ++V  TS+T+            I +Y +  R +     +          T + V
Sbjct: 9   PQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN--CHKTSWKV 66

Query: 383 TGLCPATEYQFKVVSSN 399
             L     Y F+V++ N
Sbjct: 67  DQLQEGCSYYFRVLAEN 83

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 Length = 120

 Score = 41.9 bits (98), Expect = 8e-05
 Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 2/78 (2%)

Query: 324 PNMVKFEDVRATSLTVV-LGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAP-NTRFV 381
           P+      V   S+ +     +           L      E         ++    TR V
Sbjct: 19  PHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHV 78

Query: 382 VTGLCPATEYQFKVVSSN 399
           V GL P T Y+F++  ++
Sbjct: 79  VEGLEPRTLYKFRLKVTS 96

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 13/78 (16%), Positives = 26/78 (33%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
            P  V+   + +T++ V     +   G I  Y +++                A +    +
Sbjct: 21  APRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTI 80

Query: 383 TGLCPATEYQFKVVSSNG 400
             L P   Y  KV++   
Sbjct: 81  GNLVPQKTYSVKVLAFTS 98

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 Length = 115

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 15/89 (16%)

Query: 324 PNMVKFEDVRATSLTV--VLGSEDPSPGNIISYTLWHRR---------AHEGFPARPTCT 372
           P       +   S+ +  ++   D  P  I+ + + +R           ++  P      
Sbjct: 6   PTPPNVTRLSDESVMLRWMVPRNDGLP--IVIFKVQYRMVGKRKNWQTTNDNIPYGKPKW 63

Query: 373 LFAP--NTRFVVTGLCPATEYQFKVVSSN 399
                 +    VT L P   Y+F++++  
Sbjct: 64  NSELGKSFTASVTDLKPQHTYRFRILAVY 92

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 121

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 5/79 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHE-GFPARPTCTLFAPNTRF 380
           P+         TS+ V         G   I S+ + +++  + G     T  +       
Sbjct: 21  PDRPTISTASETSVYVTW--IPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSV 78

Query: 381 VVTGLCPATEYQFKVVSSN 399
            +TGL     Y+F+V + N
Sbjct: 79  EITGLEKGISYKFRVRALN 97

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 Length = 111

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 17/77 (22%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 324 PNMVKFEDVRATSLTVV-LGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           P  +  EDV  T+ T+     +    G I  Y +            P          F V
Sbjct: 12  PQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLV-EYCLEGSEEWVPANKEPVERCGFTV 70

Query: 383 TGLCPATEYQFKVVSSN 399
             L       F+VV  N
Sbjct: 71  KDLPTGARILFRVVGVN 87

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 35/231 (15%), Positives = 66/231 (28%), Gaps = 32/231 (13%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPN-TRF 380
           P+ +   +    S  + L   +PS  +  I+ Y + +R       ++      A   + F
Sbjct: 202 PHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSF 261

Query: 381 VVTGLCPATEYQFKVVSSNGTTELGRC-------EIWFSTGSSRDEVTNCSVIERSQSPA 433
            V  L P TEY F++       E G+        E    T   R         +   S  
Sbjct: 262 TVQDLKPFTEYVFRIRCMK---EDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHT 318

Query: 434 TNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGR 493
               ++     +  +T    P  + N  ++ +Y             N   +A   TV   
Sbjct: 319 QGYRTV----QLVWKT---LPPFEAN-GKILDYEVTLTRWKS-HLQNYTVNATKLTVNLT 369

Query: 494 GTTPADAVSLLDEERANNIDGSMPDSHV----QKLESKHPPEGRIIEEMST 540
                  +         N+ G    + +       ++ HP           
Sbjct: 370 NDRYLATL------TVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKDN 414

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 7/74 (9%)

Query: 327 VKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGL 385
           +K        L +      P +PG  +SY L      E +             R ++T L
Sbjct: 16  LKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVL------EPRVLLTKL 69

Query: 386 CPATEYQFKVVSSN 399
            P T Y  +V +  
Sbjct: 70  QPDTTYIVRVRTLT 83

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score = 44.0 bits (103), Expect = 2e-04
 Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 3/76 (3%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  V+ E    TSL+V      P    +  Y + +R+  +                  + 
Sbjct: 444 PPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYN---VRRTEGFSVTLD 500

Query: 384 GLCPATEYQFKVVSSN 399
            L P T Y  +V +  
Sbjct: 501 DLAPDTTYLVQVQALT 516

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           P  V  + + ++ ++V     E      + SY + +  AH+   A     + +      +
Sbjct: 22  PTEVGVKVLSSSEISV---HWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYSARL 78

Query: 383 TGLCPATEYQFKVVSSNG 400
             L P T+Y  +V + N 
Sbjct: 79  ENLLPDTQYFIEVGACNS 96

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 113

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 6/82 (7%)

Query: 323 VPNMVKFEDVRATSLTV----VLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNT 378
            P  V+   +   ++ +        +     +   YT+  +               A   
Sbjct: 11  PPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANT--KYKNANATTL 68

Query: 379 RFVVTGLCPATEYQFKVVSSNG 400
            ++VTGL P T Y+F V+ + G
Sbjct: 69  SYLVTGLKPNTLYEFSVMVTKG 90

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 121

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 5/76 (6%)

Query: 326 MVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           +     V   +  + L    P  GN  +I Y L     +  +      ++    T   V 
Sbjct: 25  VATLSTVERRA--INLTWTKPFDGNSPLIRYILEMSENNAPWTVLLA-SVDPKATSVTVK 81

Query: 384 GLCPATEYQFKVVSSN 399
           GL PA  YQF++ + N
Sbjct: 82  GLVPARSYQFRLCAVN 97

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 124

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 14/82 (17%), Positives = 23/82 (28%), Gaps = 8/82 (9%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPAR----PTCTLFAPN 377
           P  +   ++   S  V L       G   I  + +  +    G           +     
Sbjct: 21  PTNLGISNIGPRS--VTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDA 78

Query: 378 TRFVVTGLCPATEYQFKVVSSN 399
               V  L P T Y F++   N
Sbjct: 79  RSMEVPDLNPFTCYSFRMRQVN 100

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 123

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 6/82 (7%)

Query: 323 VPNMVKFEDVRATSLTV----VLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNT 378
            P  V+   +   ++ V        ++     +  YT+  R +        +      + 
Sbjct: 21  PPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSED--TTSL 78

Query: 379 RFVVTGLCPATEYQFKVVSSNG 400
            +  TGL P T Y+F V+ +  
Sbjct: 79  SYTATGLKPNTMYEFSVMVTKN 100

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 10/79 (12%)

Query: 324 PNMVKFEDVRATSLTVVLGS-EDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRF 380
              ++      TS+TV   + E P  GN  I +Y L++              +   +  +
Sbjct: 21  APNLRAYAASPTSITV---TWETPVSGNGEIQNYKLYYMEKGTD----KEQDVDVSSHSY 73

Query: 381 VVTGLCPATEYQFKVVSSN 399
            + GL   TEY F+VV+ N
Sbjct: 74  TINGLKKYTEYSFRVVAYN 92

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 10/79 (12%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSP---GNIISYTLWHRRAHEGFPARPTCTLFAPNTRF 380
              ++      TS+ +   + +P     G +  Y L+      G               +
Sbjct: 11  VENLQAVSTSPTSILI---TWEPPAYANGPVQGYRLFCTEVSTGKEQNIE----VDGLSY 63

Query: 381 VVTGLCPATEYQFKVVSSN 399
            + GL   TEY  + ++ N
Sbjct: 64  KLEGLKKFTEYSLRFLAYN 82

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 5/79 (6%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRF 380
           VP +     VR    ++V+    P   N  +  Y + +     G P   T  +      +
Sbjct: 27  VPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYG---IGSPHAQTIKVDYKQRYY 83

Query: 381 VVTGLCPATEYQFKVVSSN 399
            +  L P++ Y   + + N
Sbjct: 84  TIENLDPSSHYVITLKAFN 102

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score = 38.4 bits (90), Expect = 7e-04
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 12/82 (14%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSP-----GNIISYTLWHRRAHEGFPARPTCTLFAPNT 378
           P  +    +  ++  +   + DP       G IISYT+  R  +     +        +T
Sbjct: 12  PQNLHVTGLTTSTTEL---AWDPPVLAERNGRIISYTVVFRDINS----QQELQNITTDT 64

Query: 379 RFVVTGLCPATEYQFKVVSSNG 400
           RF +TGL P T Y  KV +   
Sbjct: 65  RFTLTGLKPDTTYDIKVRAWTS 86

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score = 40.6 bits (95), Expect = 8e-04
 Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 5/82 (6%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSP-GN--IISYTLWHRRAHEG--FPARPTCTLFAPN 377
            P+    + V   S T  +  ++P   G   I+ Y    R   E             +  
Sbjct: 113 TPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASME 172

Query: 378 TRFVVTGLCPATEYQFKVVSSN 399
               + GL P T Y  ++ + N
Sbjct: 173 GIVTIVGLKPETTYAVRLAALN 194

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	714
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	98.74
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	98.72
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	98.72
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	98.65
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	98.65
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	98.64
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	98.64
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	98.59
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	98.57
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	98.55
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	98.55
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	98.55
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	98.53
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	98.51
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	98.5
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	98.49
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	98.48
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	98.46
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	98.46
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	98.46
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	98.45
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	98.44
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	98.43
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	98.42
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	98.42
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	98.42
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	98.42
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	98.41
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	98.41
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	98.39
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	98.38
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	98.38
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	98.38
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	98.37
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	98.36
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	98.36
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	98.35
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	98.34
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	98.33
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	98.31
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	98.29
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	98.29
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	98.28
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	98.26
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	98.26
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	98.26
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	98.23
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	98.23
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	98.2
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	98.19
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	98.18
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	98.18
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	98.17
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	98.17
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	98.16
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	98.14
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	98.13
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	98.13
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	98.12
2qbw_A	195	PDZ-fibronectin fusion protein; fibronectin PDZ, u	98.11
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	98.1
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	98.1
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	98.09
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	98.06
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	98.04
2crm_A	120	Fibronectin type-III domain containing protein 3A;	98.04
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	98.03
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	98.03
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	98.02
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	98.02
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	98.02
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	98.02
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	98.02
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	98.01
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	98.01
2crz_A	110	Fibronectin type-III domain containing protein 3A;	97.99
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	97.98
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	97.95
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	97.94
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	97.91
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	97.91
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	97.89
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	97.87
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	97.86
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	97.86
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	97.83
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	97.83
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	97.83
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	97.82
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	97.82
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	97.82
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	97.81
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	97.8
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	97.79
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	97.76
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	97.76
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	97.76
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	97.76
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	97.71
3csg_A	461	MBP, maltose-binding protein monobody YS1 fusion,	97.67
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	97.67
2dle_A	104	Receptor-type tyrosine-protein phosphatase ETA; pr	97.67
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	97.6
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	97.59
4go6_B	232	HCF C-terminal chain 1; tandem fibronectin repeat,	97.56
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	97.54
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	97.53
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	97.36
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	97.36
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	97.34
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	97.32
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	97.31
1uc6_A	109	CNTF receptor, ciliary neurotrophic factor recepto	97.3
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	97.22
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	97.13
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	97.06
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	97.04
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	97.03
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	97.01
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	97.0
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	96.99
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	96.92
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	96.88
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	96.64
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	96.63
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	96.6
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	96.5
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	96.38
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	96.31
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	96.2
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	96.18
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	96.17
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	96.15
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	96.13
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	95.91
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	95.91
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	95.59
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	95.49
3mpc_A	103	FN3-like protein; fibronectin, FN(III), unknown fu	95.16
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	95.07
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	95.01
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	94.99
4go6_B	232	HCF C-terminal chain 1; tandem fibronectin repeat,	94.88
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	94.87
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	94.71
1axi_B	236	HGHBP, growth hormone receptor; complex (hormone-r	94.38
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	93.83
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	93.53
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	93.38
3lqh_A	183	Histone-lysine N-methyltransferase MLL; PHD finger	93.21
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	93.1
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	92.93
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	92.76
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	92.71
2k16_A	75	Transcription initiation factor TFIID subunit 3; p	91.42
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	90.24
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	89.75
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	89.41
1we9_A	64	PHD finger family protein; structural genomics, PH	87.79
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	87.64
2erj_C	247	Cytokine receptor common gamma chain; immune syste	86.88
2kgg_A	52	Histone demethylase jarid1A; PHD finger, histone m	85.87
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	85.27
3dlq_R	211	Interleukin-22 receptor subunit alpha-1; cytokine-	83.78
1wee_A	72	PHD finger family protein; structural genomics, PH	83.7
1wew_A	78	DNA-binding family protein; structural genomics, P	82.23
3o70_A	68	PHD finger protein 13; PHF13, structural genomics	82.12
2hft_A	218	Human tissue factor; coagulation factor; 1.69A {Ho	80.43

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}

Probab=98.74  E-value=4.3e-08  Score=83.61  Aligned_cols=91  Identities=23%  Similarity=0.244  Sum_probs=72.0

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      ++..+++.+++++||+|-+....   ..|.||.|+|+..... ...  ...+....+.+.|.||.|.|+|.|+|.+++..
T Consensus         4 ~P~~l~~~~~~~~sv~lsW~pP~---~~i~~Y~v~y~~~~~~~~~~--~~~~~~~~t~~~i~~L~p~t~Y~~~V~A~n~~   78 (100)
T 3b83_A            4 PPFNIKVTNITLTTAVVTWQPPI---LPIEGILVTFGRKNDPSDET--TVDLTSSITSLTLTNLEPNTTYEIRIVARNGQ   78 (100)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEEESSCTTTCE--EEEECTTEEEEEECSCCTTCEEEEEEEEEETT
T ss_pred             cCCccEEEEecCCEEEEEEcCCc---ccCCEEEEEEEECCCCCCce--EEEECCcceEEEECCCCCCCEEEEEEEEEeCC
Confidence            44578999999999999986553   3699999999977543 211  23466788999999999999999999999999


Q ss_pred             ccCcceeeEEecCcccc
Q 005110          402 TELGRCEIWFSTGSSRD  418 (714)
Q Consensus       402 ~elg~~E~k~~T~s~e~  418 (714)
                      |.=-.......|...+.
T Consensus        79 g~s~p~~~~~~~~~~~~   95 (100)
T 3b83_A           79 QYSPPVSTTFTTGSLEH   95 (100)
T ss_dssp             EECCCEEEEEECCCCCC
T ss_pred             CCCCCEEEEEEEEeeec
Confidence            87767777777765543

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.72  E-value=6.8e-08  Score=83.24  Aligned_cols=92  Identities=14%  Similarity=0.084  Sum_probs=69.3

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      ++..+++++++++||+|-+.....  ....|.||+|+||..... .......++..+.++++|+||.|.|+|.|||.+|+
T Consensus        11 ~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n   90 (114)
T 1x4y_A           11 GPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQCFN   90 (114)
T ss_dssp             CCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEEEEEC
T ss_pred             CCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEEEEEEEEc
Confidence            455689999999999999988753  457899999999976543 11111235566778999999999999999999999


Q ss_pred             CCccCcce-eeEEecC
Q 005110          400 GTTELGRC-EIWFSTG  414 (714)
Q Consensus       400 ~~~elg~~-E~k~~T~  414 (714)
                      ..|+=-.+ .+.+.|.
T Consensus        91 ~~G~g~~S~~v~~~T~  106 (114)
T 1x4y_A           91 EGGESEFSNVMICETK  106 (114)
T ss_dssp             TTCCCCCCCCEEEECC
T ss_pred             CCccCCCcCCEEEEeC
Confidence            98863333 3455554

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}

Probab=98.72  E-value=5.8e-08  Score=83.07  Aligned_cols=89  Identities=20%  Similarity=0.303  Sum_probs=71.5

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      ||++..+++.+++++||+|-+....   +.|.||.|.|+.....  .++ ...+....+++.|+||.|.|+|.|+|.+++
T Consensus         2 lp~P~~l~v~~~t~~Sv~lsW~~p~---~~i~~Y~v~y~~~~~~--~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~   76 (98)
T 3tes_A            2 LPAPKNLVVSEVTEDSLRLSWTAPD---AAFDSFMIQYQESEKV--GEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVK   76 (98)
T ss_dssp             BCCCEEEEEESCCSSCEEEEEECCT---TSCSEEEEEEEETTBC--SCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCCCCceEEEecCCCeEEEEecCCc---CccceEEEEEEECCCC--CceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEe
Confidence            5677889999999999999998654   4799999999987532  112 234566789999999999999999999999


Q ss_pred             CCccCcceeeEEecC
Q 005110          400 GTTELGRCEIWFSTG  414 (714)
Q Consensus       400 ~~~elg~~E~k~~T~  414 (714)
                      +.|+-........|.
T Consensus        77 ~~g~S~p~~~~~~~~   91 (98)
T 3tes_A           77 GGHRSNPLSAEFTTG   91 (98)
T ss_dssp             TTEEBCCEEEEEECS
T ss_pred             CCcccCCEEEEEEcC
Confidence            987766666666664

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.5e-07  Score=83.13  Aligned_cols=89  Identities=13%  Similarity=0.082  Sum_probs=73.2

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      +.++..++|.+|+++|+.|-++...   ..|.||+|-|+........  ...+....+.+.|.||.|.|+|.|+|.+|++
T Consensus         8 ~~pP~~l~~~~vt~tsi~vsW~pp~---~~i~~Y~I~y~~~~~~~~~--~~~v~~~~t~~~l~~L~p~T~Y~v~V~A~~~   82 (108)
T 2ee3_A            8 LAPPRHLGFSDVSHDAARVFWEGAP---RPVRLVRVTYVSSEGGHSG--QTEAPGNATSAMLGPLSSSTTYTVRVTCLYP   82 (108)
T ss_dssp             CCCSSCEEEESCCSSCEEEEESCCS---SCCSEEEEEEEETTTCCBC--CEEEETTCCEEEECSCCSSCEEEEEEEEECT
T ss_pred             CCCCceEEEEEccCCeEEEEeeCCC---CCccEEEEEEEeCCCCcee--EEEcCCCcCEEEcCCCCCCCEEEEEEEEEeC
Confidence            4566789999999999999998642   5799999999987543211  2345567889999999999999999999999


Q ss_pred             CccCcceeeEEecC
Q 005110          401 TTELGRCEIWFSTG  414 (714)
Q Consensus       401 ~~elg~~E~k~~T~  414 (714)
                      .|+-..++..+.|.
T Consensus        83 ~g~s~p~~~~~~T~   96 (108)
T 2ee3_A           83 GGGSSTLTGRVTTK   96 (108)
T ss_dssp             TSCEEEEEEEEECC
T ss_pred             CCcCCCccCEEEeC
Confidence            99888888888886

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.65  E-value=1.7e-07  Score=78.86  Aligned_cols=92  Identities=21%  Similarity=0.200  Sum_probs=70.4

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      .|.+..+++..++++||+|.+.........|.||.|.|+.....  ..-...+....+.+.|.||.|.|.|.|||.+++.
T Consensus         7 ~P~~p~~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   84 (107)
T 2dn7_A            7 GPGRPTMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEA--RPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNR   84 (107)
T ss_dssp             CCCCCEEEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCS--SCEEEEEETTCCEEEEECCCTTCEEEEEEEEEET
T ss_pred             CCCCCcEeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCCC--CCEEEEeCCCccEEEeCCCCCCCEEEEEEEEEcC
Confidence            34444488999999999999988654455699999999987643  1112345667789999999999999999999999


Q ss_pred             CccCcceeeEEecC
Q 005110          401 TTELGRCEIWFSTG  414 (714)
Q Consensus       401 ~~elg~~E~k~~T~  414 (714)
                      .|.=-.++..+.|.
T Consensus        85 ~G~g~~s~~~~~T~   98 (107)
T 2dn7_A           85 AGLGEEFEKEIRTP   98 (107)
T ss_dssp             TEEEEEEEEEEECC
T ss_pred             CcccCCeeeEEeCC
Confidence            87655566666663

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.64  E-value=2.6e-07  Score=78.24  Aligned_cols=87  Identities=15%  Similarity=0.209  Sum_probs=68.3

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  404 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  404 (714)
                      ..+++.+++++||+|-+.........|.||.|.|+.....  ..-..++....+.+.|.||.|.|.|.|+|.+++..| .
T Consensus        12 ~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G-~   88 (108)
T 2djs_A           12 PIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHN--EFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAG-Y   88 (108)
T ss_dssp             SCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSC--STTCEEEEESSSEEEEESCCTTCEEEEEEEEEESSC-E
T ss_pred             cceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCC--CcceeEEecCccEEEEcCCCCCCEEEEEEEEEeCCE-E
Confidence            4578999999999999988754445699999999987653  112346677889999999999999999999999987 4


Q ss_pred             cce--eeEEecC
Q 005110          405 GRC--EIWFSTG  414 (714)
Q Consensus       405 g~~--E~k~~T~  414 (714)
                      |.+  .+.+.|.
T Consensus        89 g~~S~~~~~~T~  100 (108)
T 2djs_A           89 GKFSGKMCFQTL  100 (108)
T ss_dssp             EEECCCEEEECC
T ss_pred             CCCCCCEEEEeC
Confidence            443  4455554

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C

Probab=98.64  E-value=9.6e-08  Score=82.23  Aligned_cols=81  Identities=16%  Similarity=0.164  Sum_probs=62.4

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCc-eeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPT-CTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept-~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      ++..++++.++++||.|-.+....  ....|.||+|+||........+.. .++....++++|.||.|.|.|.|||.+||
T Consensus         7 ~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~v~V~A~n   86 (102)
T 3n1f_C            7 GPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDIKMQCFN   86 (102)
T ss_dssp             CCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCceEEECCCCCCCCEEEEEEEEEC
Confidence            556789999999999999987753  457899999999986532111222 24455678999999999999999999999


Q ss_pred             CCcc
Q 005110          400 GTTE  403 (714)
Q Consensus       400 ~~~e  403 (714)
                      ..|+
T Consensus        87 ~~G~   90 (102)
T 3n1f_C           87 EGGE   90 (102)
T ss_dssp             TTEE
T ss_pred             CCcC
Confidence            8765

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.59  E-value=2.7e-07  Score=78.66  Aligned_cols=88  Identities=20%  Similarity=0.194  Sum_probs=68.1

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..++++.++++||+|-++........|.||.|+||.....-   . .++....+.+.|.||.|.|+|.|||.+++..|
T Consensus        20 ~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~---~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   95 (116)
T 1x5g_A           20 PAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDK---E-QDVDVSSHSYTINGLKKYTEYSFRVVAYNKHG   95 (116)
T ss_dssp             CCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCC---C-CCEEECSSEEEECSCCTTCEEEEEEEEECSSC
T ss_pred             CCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCc---c-EEEecCCceEEEcCCCCCCEEEEEEEEEcCCC
Confidence            4457899999999999999877545567999999999876541   1 34556789999999999999999999999988


Q ss_pred             cCccee-eEEecC
Q 005110          403 ELGRCE-IWFSTG  414 (714)
Q Consensus       403 elg~~E-~k~~T~  414 (714)
                      .=..++ +.+.|.
T Consensus        96 ~g~~S~~~~~~T~  108 (116)
T 1x5g_A           96 PGVSTPDVAVRTL  108 (116)
T ss_dssp             CCCBCCCCCEECC
T ss_pred             cCCCCCCEEEECC
Confidence            522232 444443

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.57  E-value=3.4e-07  Score=78.84  Aligned_cols=92  Identities=22%  Similarity=0.254  Sum_probs=69.7

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCC-----CceeeecCCceeEeecCCcceeeeEE
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPAR-----PTCTLFAPNTRFVVTGLCPATEYQFK  394 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~e-----pt~~~~~p~~r~~vs~L~P~TEY~fk  394 (714)
                      ++..+++..++++||+|-++....  ....|.||+|+||..... ....     ....+..+.+.+.|.||.|.|.|.|+
T Consensus        17 ~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~   96 (125)
T 1uen_A           17 APGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLN   96 (125)
T ss_dssp             CCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEESCCSSCEEEEE
T ss_pred             CCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccEEEeCCCCCCCEEEEE
Confidence            445788999999999999988642  345799999999988765 2211     13345677899999999999999999


Q ss_pred             EEeccCCccCccee-eEEecC
Q 005110          395 VVSSNGTTELGRCE-IWFSTG  414 (714)
Q Consensus       395 vvsF~~~~elg~~E-~k~~T~  414 (714)
                      |.+|+..|.=-.++ +.+.|.
T Consensus        97 V~A~n~~G~g~~S~~~~~~T~  117 (125)
T 1uen_A           97 VRVVNGKGEGPASPDRVFNTP  117 (125)
T ss_dssp             EEEEESSCEEEECCCEEEECC
T ss_pred             EEEecCCCCCCCCCCEEEECC
Confidence            99999988622333 455554

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.55  E-value=7.2e-07  Score=77.67  Aligned_cols=91  Identities=22%  Similarity=0.320  Sum_probs=68.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++..++++||+|.+.........|.||.|+|+........--..++....+.+.|.||.|.|.|.|||.+++..|
T Consensus        30 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G  109 (130)
T 1wfo_A           30 PPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKG  109 (130)
T ss_dssp             CCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEEECTTCCEEEEESCCSSSEEEEEEEEECSSC
T ss_pred             CCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEEEEeCCCceEEEEcCCCCCCEEEEEEEEEeCCc
Confidence            34458999999999999998765445569999999998754311111225667789999999999999999999999988


Q ss_pred             cCcceee-EEec
Q 005110          403 ELGRCEI-WFST  413 (714)
Q Consensus       403 elg~~E~-k~~T  413 (714)
                      .=-.++. .+.|
T Consensus       110 ~g~~S~~~~~~T  121 (130)
T 1wfo_A          110 WGEAAEALVVTT  121 (130)
T ss_dssp             EEEEEEEEEECC
T ss_pred             CCCCcccEEEec
Confidence            6334444 3444

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}

Probab=98.55  E-value=4.1e-07  Score=78.24  Aligned_cols=82  Identities=18%  Similarity=0.176  Sum_probs=64.2

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          320 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       320 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      .+.++..+++.+++++||+|-..........|.||.|.|+.....- ..-...+....+.+.|.||.|.|+|.|+|.+++
T Consensus         7 ~~~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~-~~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~~   85 (103)
T 3t04_D            7 VSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDS-PVQEFTVPGYYSTATISGLKPGVDYTITVYAYD   85 (103)
T ss_dssp             CCCCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSS-CCEEEEEETTCCEEEECSCCTTCCEEEEEEEES
T ss_pred             cCCCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCC-ccEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence            3445667999999999999999876544467999999999864320 111234566789999999999999999999998


Q ss_pred             C--Cc
Q 005110          400 G--TT  402 (714)
Q Consensus       400 ~--~~  402 (714)
                      .  .|
T Consensus        86 ~~~~G   90 (103)
T 3t04_D           86 TFFPG   90 (103)
T ss_dssp             CCCTT
T ss_pred             CCCCC
Confidence            7  55

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A

Probab=98.55  E-value=3.4e-07  Score=78.72  Aligned_cols=88  Identities=19%  Similarity=0.279  Sum_probs=69.9

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCc-eeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPT-CTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept-~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      ++..+++.+|+++||+|-+....   ..|.||.|.|+.....  .+.. ..+....+.+.|.||.|.|+|.|+|.++++.
T Consensus         5 ~P~~l~v~~~t~~sv~lsW~~p~---~~i~~Y~v~y~~~~~~--~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~   79 (104)
T 2rb8_A            5 APSQIEVKDVTDTTALITWMPPS---QPVDGFELTYGIKDVP--GDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRGD   79 (104)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEEETTCT--TCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCccEEEEecCCeEEEEEcCCC---CccceEEEEEEECcCC--CceEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEeCC
Confidence            45578999999999999986543   5699999999875422  1222 2356778999999999999999999999999


Q ss_pred             ccCcceeeEEecCc
Q 005110          402 TELGRCEIWFSTGS  415 (714)
Q Consensus       402 ~elg~~E~k~~T~s  415 (714)
                      |.-......+.|.-
T Consensus        80 g~s~p~~~~~~T~~   93 (104)
T 2rb8_A           80 MSSNPAKETFTTGL   93 (104)
T ss_dssp             EECCCEEEEEECCC
T ss_pred             ccCCCEEEEEECCC
Confidence            88777777777763

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.53  E-value=3.6e-07  Score=76.09  Aligned_cols=88  Identities=22%  Similarity=0.236  Sum_probs=67.1

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCce-eeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTC-TLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~-~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      .++..+++.+++++||+|-++...   ..|.||.|.|+.......  ... ++..+.+.+.|.||.|.|+|.|+|.++++
T Consensus         3 ~~P~~l~~~~~~~~si~lsW~~p~---~~i~~Y~v~y~~~~~~~~--~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~   77 (94)
T 1j8k_A            3 DRPKGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGIH--ELFPAPDGEEDTAELQGLRPGSEYTVSVVALHD   77 (94)
T ss_dssp             CCCCCCEEEEEETTEEEEECCCCS---SCCSCEEEEEEETTTEEE--EECCCCCSSCCEEEECSCCCCSEEEEEEEECSS
T ss_pred             CCCCccEEEeecCCEEEEEEcCCC---CCcceEEEEEEeCCCCCc--eEEecCCCCccEEEeCCCCCCCEEEEEEEEEcC
Confidence            455678999999999999996654   569999999987643200  011 12346889999999999999999999999


Q ss_pred             CccCcceeeEEecC
Q 005110          401 TTELGRCEIWFSTG  414 (714)
Q Consensus       401 ~~elg~~E~k~~T~  414 (714)
                      .|+-........|.
T Consensus        78 ~g~s~p~~~~~~T~   91 (94)
T 1j8k_A           78 DMESQPLIGTQSTA   91 (94)
T ss_dssp             SCCCCCEEEEEECC
T ss_pred             CCcCCCEEeEEEec
Confidence            88766677666664

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.51  E-value=5.4e-07  Score=76.21  Aligned_cols=88  Identities=26%  Similarity=0.358  Sum_probs=68.3

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +..+++..++++||+|.++........|.||.|+||.....  .....++....+.+.|.||.|.|.|.|||.+++..|.
T Consensus        14 P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   91 (111)
T 1x5l_A           14 VVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKE--MQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAGC   91 (111)
T ss_dssp             CCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSC--CSSCEEEEESSSEEEECSCCTTCEEEECEEEEETTEE
T ss_pred             CceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCC--ceeEEEecCCCCEEEEcCCCCCCEEEEEEEEEeCCcC
Confidence            34678889999999999987754455699999999987532  2233466778899999999999999999999999885


Q ss_pred             Ccce--eeEEecC
Q 005110          404 LGRC--EIWFSTG  414 (714)
Q Consensus       404 lg~~--E~k~~T~  414 (714)
                       |.+  .+.+.|.
T Consensus        92 -g~~S~~~~~~T~  103 (111)
T 1x5l_A           92 -GRFSQAMEVETG  103 (111)
T ss_dssp             -CCCCCCEEEECC
T ss_pred             -CCCcccEEEEcC
Confidence             543  3444443

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.50  E-value=4.8e-07  Score=78.58  Aligned_cols=91  Identities=16%  Similarity=0.140  Sum_probs=67.4

Q ss_pred             CceEEEEEeeceeEEEEeCcC--CCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          324 PNMVKFEDVRATSLTVVLGSE--DPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~--~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      +-.+++..++++||+|-++..  ......|.||.|+||..... ........+....+.+.|.||.|.|.|.|||.+++.
T Consensus        22 P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~  101 (134)
T 2edx_A           22 PQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTD  101 (134)
T ss_dssp             SEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCSEEEEESCCTTCEEEEEEEEEET
T ss_pred             CcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCccEEEeCCCCCCCEEEEEEEEEcC
Confidence            458999999999999999887  33456799999999987653 111111122467899999999999999999999999


Q ss_pred             CccCccee-eEEecC
Q 005110          401 TTELGRCE-IWFSTG  414 (714)
Q Consensus       401 ~~elg~~E-~k~~T~  414 (714)
                      .|.=-.++ +.+.|.
T Consensus       102 ~G~g~~S~~~~~~T~  116 (134)
T 2edx_A          102 VGPGPESSPVLVRTD  116 (134)
T ss_dssp             TBCCCCCCCEEEECC
T ss_pred             CCcCCCCCCEEeecC
Confidence            87432333 455554

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.49  E-value=6.6e-07  Score=75.92  Aligned_cols=86  Identities=23%  Similarity=0.298  Sum_probs=66.3

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++..++++||+|.++....  ..|.||.|+||.....   +...+...+.+.+.|.||.|.|+|.|||.+++..|
T Consensus        20 ~P~~l~~~~~~~~sv~l~W~~p~~--~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   94 (115)
T 1x5z_A           20 QPLNFKAEPESETSILLSWTPPRS--DTIANYELVYKDGEHG---EEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQG   94 (115)
T ss_dssp             CCEEEEEECSSSSEEEEEEECCSC--CCCCEEEECBEESSSC---CCBCCEECSSSEEEEECCCTTCEEEECEEEECSSC
T ss_pred             CCccCEeeeCCCCEEEEEEcCCCC--CCccEEEEEEEeCCCC---CceEEecCCCcEEEECCCCCCCeEEEEEEEECCCc
Confidence            456789999999999999977643  2799999999987654   11334456789999999999999999999999987


Q ss_pred             cCcce--eeEEecC
Q 005110          403 ELGRC--EIWFSTG  414 (714)
Q Consensus       403 elg~~--E~k~~T~  414 (714)
                      . |.+  .+.+.|.
T Consensus        95 ~-g~~S~~~~~~T~  107 (115)
T 1x5z_A           95 L-GASTAEISARTM  107 (115)
T ss_dssp             E-EEECCCEEEECC
T ss_pred             c-cCCCcCEEEecC
Confidence            4 432  2445553

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.48  E-value=1e-06  Score=76.04  Aligned_cols=89  Identities=18%  Similarity=0.118  Sum_probs=66.6

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +..+++..++++||+|-+.....  ..|.||.|.||.....-...-...+....+.+.|.||.|.|+|.|+|.+|+..|.
T Consensus        22 P~~l~~~~~~~~sv~l~W~~p~~--g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   99 (119)
T 2ee2_A           22 PTEVGVKVLSSSEISVHWEHVLE--KIVESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGC   99 (119)
T ss_dssp             CCSCEEEEEETTEEEEECCCCSC--TTCCEEEEEEEESSSCGGGCEEEEEETTCSEEEECSCCTTCEEEEEEEEECSSSC
T ss_pred             CCcEEEEEccCCEEEEEecCCCC--CccceEEEEEEECCCcccCcEEEEcCCCEeEEEECCCCCCCEEEEEEEEEcCCcc
Confidence            34789999999999999987765  7799999999887543111112234556789999999999999999999999885


Q ss_pred             Cccee-eEEecC
Q 005110          404 LGRCE-IWFSTG  414 (714)
Q Consensus       404 lg~~E-~k~~T~  414 (714)
                      =-.++ +.+.|.
T Consensus       100 g~~S~~~~~~T~  111 (119)
T 2ee2_A          100 GPPSDMIEAFTK  111 (119)
T ss_dssp             CCCCCCEEEECC
T ss_pred             CCCCCCEEEECC
Confidence            33333 455554

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.46  E-value=6.5e-07  Score=75.53  Aligned_cols=88  Identities=16%  Similarity=0.177  Sum_probs=66.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..++++.++++||+|..+........|.||+|+||.....   + ...+....+.+.|.||.|.|.|.|+|.+++..|
T Consensus        10 ~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~---~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   85 (106)
T 2ed8_A           10 PVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTG---K-EQNIEVDGLSYKLEGLKKFTEYSLRFLAYNRYG   85 (106)
T ss_dssp             CCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTC---C-EEEEEECSSCEEEESCCTTCEEEEEEEEECSSC
T ss_pred             CCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCC---c-eEEEeCCccEEEECCCCCCCEEEEEEEEEeCCc
Confidence            445789999999999999987754445799999999987543   1 124455689999999999999999999999987


Q ss_pred             cCccee-eEEecC
Q 005110          403 ELGRCE-IWFSTG  414 (714)
Q Consensus       403 elg~~E-~k~~T~  414 (714)
                      .=..++ +.+.|.
T Consensus        86 ~g~~S~~~~~~T~   98 (106)
T 2ed8_A           86 PGVSTDDITVVTL   98 (106)
T ss_dssp             EEEECCCEEEECC
T ss_pred             cCCCcCCEEEEcC
Confidence            422233 444443

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}

Probab=98.46  E-value=1.2e-06  Score=73.43  Aligned_cols=87  Identities=23%  Similarity=0.255  Sum_probs=65.2

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      .++..+++.+++++||+|.+...   ...|.||.|.|+.....  ... ...+....+.+.|.||.|.|+|.|+|.+++.
T Consensus         3 ~~P~~l~v~~~~~~sv~l~W~~p---~~~i~~Y~v~y~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   77 (98)
T 3teu_A            3 DAPTDLQVTNVTDTSITVSWTPP---SATITGYRITYTPSNGP--GEPKELTVPPSSTSVTITGLTPGVEYVVSVYALKD   77 (98)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECC---SSCCSEEEEEEEETTSC--SCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCceEEEEecCCEEEEEEeCC---CCcccEEEEEEEECCCC--CceEEEEcCCCcCEEEecCCCCCCEEEEEEEEEeC
Confidence            35567899999999999998866   36799999999965432  122 2234567889999999999999999999998


Q ss_pred             CccCcceeeEEec
Q 005110          401 TTELGRCEIWFST  413 (714)
Q Consensus       401 ~~elg~~E~k~~T  413 (714)
                      .|.--..-....|
T Consensus        78 ~G~s~p~~~~~~~   90 (98)
T 3teu_A           78 NQESPPLVGTQTT   90 (98)
T ss_dssp             TEECCCEEEEEEC
T ss_pred             CCCCCCeEEEecc
Confidence            8743333333333

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.46  E-value=5e-07  Score=77.13  Aligned_cols=92  Identities=16%  Similarity=0.155  Sum_probs=68.4

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++..++++||+|-.+........|.||.|.|+.........-..+.....+.+.|.+|.|.|.|.|||.+++..|
T Consensus        21 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G  100 (121)
T 2dlh_A           21 APRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIG  100 (121)
T ss_dssp             CCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCCCCCSSCSEECCBSCCSSCEEEEEEEEEESSC
T ss_pred             CCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEEEecCCceEEEecCCCCCCEEEEEEEEEeCCc
Confidence            45578999999999999998875455669999999998754311111222345788999999999999999999999987


Q ss_pred             cCcce-eeEEecC
Q 005110          403 ELGRC-EIWFSTG  414 (714)
Q Consensus       403 elg~~-E~k~~T~  414 (714)
                      .=-.+ .+.+.|.
T Consensus       101 ~g~~S~~~~~~T~  113 (121)
T 2dlh_A          101 DGPLSSDIQVITQ  113 (121)
T ss_dssp             BCCCCCCEEEECC
T ss_pred             cCCCCCCEEEECC
Confidence            63233 3556554

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.45  E-value=1.2e-06  Score=75.33  Aligned_cols=91  Identities=19%  Similarity=0.176  Sum_probs=72.0

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      .++..+++.+|+++||+|-+....   ..|.||.|-|+......  . ...+....+.+.|.||.|.|+|.|+|.++++.
T Consensus         9 ~~P~~l~v~~~~~~sv~lsW~~p~---~~i~~Y~i~y~~~~~~~--~-~~~~~~~~ts~~l~~L~p~t~Y~~~V~A~~~~   82 (105)
T 2cum_A            9 EAPRDLEAKEVTPRTALLTWTEPP---VRPAGYLLSFHTPGGQT--Q-EILLPGGITSHQLLGLFPSTSYNARLQAMWGQ   82 (105)
T ss_dssp             CCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEECTTSCE--E-EEEECSSCSEEEECSCCTTCEEEEEEEEEBTT
T ss_pred             CCCCceEEEeccCCEEEEEEcCCC---CccceEEEEEEeCCCce--E-EEEECCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            355678999999999999986543   37999999988754321  1 22456678999999999999999999999998


Q ss_pred             ccCcceeeEEecCcccc
Q 005110          402 TELGRCEIWFSTGSSRD  418 (714)
Q Consensus       402 ~elg~~E~k~~T~s~e~  418 (714)
                      |.-......+.|.....
T Consensus        83 g~s~~~~~~~~T~~~~~   99 (105)
T 2cum_A           83 SLLPPVSTSFTTGGLRI   99 (105)
T ss_dssp             BCCCCEEEEEECCCSCC
T ss_pred             cccCCEEEEEEeCCcCC
Confidence            88778888888875443

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.44  E-value=2e-06  Score=72.99  Aligned_cols=91  Identities=18%  Similarity=0.199  Sum_probs=67.4

Q ss_pred             cCceEEEEEe--eceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          323 VPNMVKFEDV--RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       323 ~~~~~rFE~v--t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      ++-.+++..+  +++||+|-.+........|.||.|.|+..... ...--...+....+.+.|.+|.|.|.|.|||.+++
T Consensus        11 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n   90 (114)
T 2ede_A           11 APKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYFRIQARN   90 (114)
T ss_dssp             CCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSCEEEEEEEEEC
T ss_pred             CCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCCEEEEEEEEEe
Confidence            4456888888  89999999987754445799999999986543 11111335567889999999999999999999999


Q ss_pred             CCccCcc-ee-eEEecC
Q 005110          400 GTTELGR-CE-IWFSTG  414 (714)
Q Consensus       400 ~~~elg~-~E-~k~~T~  414 (714)
                      ..|. |. ++ +.+.|.
T Consensus        91 ~~G~-g~~S~~~~~~T~  106 (114)
T 2ede_A           91 SKGV-GPLSDPILFRTL  106 (114)
T ss_dssp             SSCB-CCCCCCEEEECC
T ss_pred             CCcC-cCCcccEEEEec
Confidence            9876 43 33 444453

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=1.7e-06  Score=74.17  Aligned_cols=90  Identities=20%  Similarity=0.189  Sum_probs=67.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceee-ecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTL-FAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~-~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      ++..+++.+++++||+|.++..... ..|.||.|.|+.....  ..-...+ ....+.+.|.||.|.|+|.|||.+++..
T Consensus        20 ~P~~l~~~~~~~~sv~l~W~~p~~~-g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~   96 (118)
T 2yrz_A           20 TPTRLVFSALGPTSLRVSWQEPRCE-RPLQGYSVEYQLLNGG--ELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQE   96 (118)
T ss_dssp             CCCCCEECCCBTTEEEEECCCCCCS-SCEEEEEEEEEBSSSC--CEEEEEESCTTCCEEEEESCCTTCEEEEEEEEEESS
T ss_pred             CCCceEEEeCCCCEEEEEeCCCCCC-CCccEEEEEEEECCCC--ceEEEEcCCCCcCEEEeCCCCCCCEEEEEEEEEcCC
Confidence            4456799999999999999876543 4799999999986542  1111222 2458999999999999999999999998


Q ss_pred             ccCcceeeEEecCc
Q 005110          402 TELGRCEIWFSTGS  415 (714)
Q Consensus       402 ~elg~~E~k~~T~s  415 (714)
                      |.=-.++..+.+..
T Consensus        97 G~g~~S~~~~~~~t  110 (118)
T 2yrz_A           97 GWGREREGVITIES  110 (118)
T ss_dssp             CEEEEEEEEEECCC
T ss_pred             cCCCCcCCceEeCC
Confidence            85444565555543

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.42  E-value=2.3e-06  Score=73.12  Aligned_cols=91  Identities=18%  Similarity=0.146  Sum_probs=66.6

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCcee--eecCCceeEeecCCcceeeeEEEEe
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCT--LFAPNTRFVVTGLCPATEYQFKVVS  397 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~--~~~p~~r~~vs~L~P~TEY~fkvvs  397 (714)
                      ++..+++..++++||+|-......  ....|.||.|.||..... ........  .....+.+.|.||.|.|.|.|+|.+
T Consensus        18 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A   97 (122)
T 1va9_A           18 PPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQA   97 (122)
T ss_dssp             CCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSSCCEEEEEEE
T ss_pred             CCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEeCCCCCCCEEEEEEEE
Confidence            455799999999999999988764  456799999999988653 21111111  1234589999999999999999999


Q ss_pred             ccCCccCccee-eEEec
Q 005110          398 SNGTTELGRCE-IWFST  413 (714)
Q Consensus       398 F~~~~elg~~E-~k~~T  413 (714)
                      ++..|.=-.++ +.+.|
T Consensus        98 ~n~~G~g~~S~~~~~~T  114 (122)
T 1va9_A           98 FNRAGTGPSSSEINATT  114 (122)
T ss_dssp             EETTEECCCCCCEECCC
T ss_pred             EcCCCCCCCccCEEEEe
Confidence            99988622333 44444

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.42  E-value=7.9e-07  Score=80.07  Aligned_cols=89  Identities=17%  Similarity=0.104  Sum_probs=63.0

Q ss_pred             ceEEE---EEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCc-e-eeecCCceeEeecCCcceeeeEEEEec
Q 005110          325 NMVKF---EDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPT-C-TLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       325 ~~~rF---E~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept-~-~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      +.|++   +.+++|||.|-... ......|.||+|+||+.... -..+-+ . +.....+.++|+||.|.|+|.|+|.+|
T Consensus        17 ~~v~l~~~~a~sstsi~vsW~~-~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~   95 (120)
T 1ujt_A           17 VLVRLHNPVVLTPTTVQVTWTV-DRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPY   95 (120)
T ss_dssp             CCEEECCCCCCBTTEEEEEEEE-SSCCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEE
T ss_pred             cEEEeeccEEccCceEEEEEcc-CCCCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEE
Confidence            45555   45589999999884 33457799999999988651 111111 1 223347899999999999999999999


Q ss_pred             cCCccCccee-eEEecC
Q 005110          399 NGTTELGRCE-IWFSTG  414 (714)
Q Consensus       399 ~~~~elg~~E-~k~~T~  414 (714)
                      +..|+=-.++ +.+.|.
T Consensus        96 n~~G~Gp~S~~v~~~T~  112 (120)
T 1ujt_A           96 FNEFQGMDSESKTVRTT  112 (120)
T ss_dssp             SSSCCCCCCCCEEEEEC
T ss_pred             CCCccCCCCCCEEEECC
Confidence            9887544444 556664

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.42  E-value=2.3e-06  Score=73.09  Aligned_cols=89  Identities=15%  Similarity=0.171  Sum_probs=67.0

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +..+++++++++||+|-.+........|.||.|.||..... ......++....+.++|.||.|.|+|.|||.+++..|.
T Consensus        11 p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   89 (109)
T 2e7h_A           11 VSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAE-GPSSVRFLKTSENRAELRGLKRGASYLVQVRARSEAGY   89 (109)
T ss_dssp             CCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCC-STTTSEEEEESSSEEEEESCCTTSCEEEEEEEECSSCB
T ss_pred             CCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCC-CCceeEEEccCCCEEEECCCCCCCeEEEEEEEEeCCcc
Confidence            34688999999999999988764445699999999987521 11122345667889999999999999999999999873


Q ss_pred             Ccce--eeEEecC
Q 005110          404 LGRC--EIWFSTG  414 (714)
Q Consensus       404 lg~~--E~k~~T~  414 (714)
                       |.+  .+.+.|.
T Consensus        90 -g~~S~~~~~~T~  101 (109)
T 2e7h_A           90 -GPFGQEHHSQTQ  101 (109)
T ss_dssp             -CCCCSCEECCCC
T ss_pred             -CCCCCCEEEEcC
Confidence             432  3445553

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A

Probab=98.42  E-value=2.2e-06  Score=73.24  Aligned_cols=80  Identities=16%  Similarity=0.233  Sum_probs=63.3

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      .++..+++.+++++||+|-..... ....|.||.|-|+..... ...-...+....+.+.|.||.|.|+|.|+|.++++.
T Consensus         6 ~~P~~l~v~~~t~~Sv~l~W~~p~-~~~~i~~Y~v~y~~~~~~-~~~~~~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~~~   83 (101)
T 3k2m_C            6 SVPTKLEVVAATPTSLLISWDAPM-SSSSVYYYRITYGETGGN-SPVQEFTVPYSSSTATISGLSPGVDYTITVYAWGED   83 (101)
T ss_dssp             BSSCEEEEEEEETTEEEEEECCCC-TTSCCCEEEEEEEETTCS-SCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEEC
T ss_pred             CCCcceEEeecCCCEEEEEecCCC-CCCceeeEEEEEEECCCC-CccEEEEcCCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            355679999999999999998754 235799999999986432 011123466778999999999999999999999987


Q ss_pred             cc
Q 005110          402 TE  403 (714)
Q Consensus       402 ~e  403 (714)
                      ++
T Consensus        84 ~~   85 (101)
T 3k2m_C           84 SA   85 (101)
T ss_dssp             TT
T ss_pred             cc
Confidence            76

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=2.2e-06  Score=73.52  Aligned_cols=88  Identities=15%  Similarity=0.166  Sum_probs=65.4

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      .++-.+++.+++++||+|-+....    ++.||.|.|+........... .+..+...+.|+||.|.|+|.|+|.++++.
T Consensus        10 ~~P~~l~~~~~~~~sv~lsW~~p~----~~~~Y~v~y~~~~~~~~~~~~-~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~   84 (104)
T 2dkm_A           10 PPPRALTLAAVTPRTVHLTWQPSA----GATHYLVRCSPASPKGEEEER-EVQVGRPEVLLDGLEPGRDYEVSVQSLRGP   84 (104)
T ss_dssp             CCCCCCEEEEECSSEEEEECCCCS----SCSEEEEEEEESSSCCSSCCE-EEEESSSEEEEESCCTTCCEEEEEEEECSS
T ss_pred             CCCceeEEEecCCCEEEEEEeCCC----CCCeEEEEEEECCCCCCcceE-EEecCCCEEEECCCCCCCEEEEEEEEECCC
Confidence            455678999999999999996543    259999999976542111222 333344499999999999999999999987


Q ss_pred             ccCcceeeEEecC
Q 005110          402 TELGRCEIWFSTG  414 (714)
Q Consensus       402 ~elg~~E~k~~T~  414 (714)
                      +.-....+.+.|.
T Consensus        85 ~~s~p~~~~~~T~   97 (104)
T 2dkm_A           85 EGSEARGIRARTP   97 (104)
T ss_dssp             SBCCCEEEECCCC
T ss_pred             CCCCCEEEEEEcC
Confidence            7766666666664

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.41  E-value=7.9e-07  Score=77.20  Aligned_cols=87  Identities=13%  Similarity=0.110  Sum_probs=69.0

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      .++..+++.+|+++||+|-+....   ..|.||.|.|+.....   .-...+....+.+.|.||.|.|+|.|+|.++++.
T Consensus         9 ~~P~~l~~~~~t~~sv~lsW~~p~---~~i~~Y~v~y~~~~~~---~~~~~v~~~~t~~~l~~L~P~t~Y~~~V~A~~~~   82 (115)
T 2cuh_A            9 DGPTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGAP---PLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGP   82 (115)
T ss_dssp             SSCEEEECCCCSSSCEEEEEECCS---SCCSEEEEEEECSSSC---CEEEEEETTCSEEEECSCCSSSEEEEEEEEEETT
T ss_pred             CCCcceEEEeccCCeEEEEEECCC---CCccEEEEEEEcCCCC---cEEEEECCCccEEEEeCCCCCCEEEEEEEEEeCC
Confidence            355578999999999999986542   4699999999875432   1123456778999999999999999999999988


Q ss_pred             ccCcceeeEEecC
Q 005110          402 TELGRCEIWFSTG  414 (714)
Q Consensus       402 ~elg~~E~k~~T~  414 (714)
                      +.-......+.|.
T Consensus        83 ~~s~~~~~~~~T~   95 (115)
T 2cuh_A           83 NLTSPASITFTTG   95 (115)
T ss_dssp             EECCCEEEEEESC
T ss_pred             CcCCCEEEEEEeC
Confidence            8766677777775

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.39  E-value=1.1e-06  Score=75.28  Aligned_cols=89  Identities=17%  Similarity=0.235  Sum_probs=66.3

Q ss_pred             cCceEEEEEeeceeEEEEeCcCC-CCCCCcceEEEEeeecCCCCCCCCc-eeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          323 VPNMVKFEDVRATSLTVVLGSED-PSPGNIISYTLWHRRAHEGFPARPT-CTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~y~~ept-~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      ++..+++..++++||+|.++... .....|.||.|.|+.....  .... .++....+.+.|.||.|.|+|.|||.+++.
T Consensus        20 ~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   97 (120)
T 1x5f_A           20 APRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIA--RERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNK   97 (120)
T ss_dssp             CCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCC--CCEEEECSSTTCSEEEECSCCTTCEEEEEEEEECS
T ss_pred             CCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCC--CceEEEeccCCccEEEeCCCCCCCEEEEEEEEECC
Confidence            44578999999999999998876 4445899999999987542  1111 122345889999999999999999999999


Q ss_pred             CccCcce-eeEEec
Q 005110          401 TTELGRC-EIWFST  413 (714)
Q Consensus       401 ~~elg~~-E~k~~T  413 (714)
                      .|.=..+ .+.+.|
T Consensus        98 ~G~g~~S~~~~~~T  111 (120)
T 1x5f_A           98 HGSGESSAPLRVET  111 (120)
T ss_dssp             SCEEEECCCEEEEC
T ss_pred             CccCCCCCCEEEEe
Confidence            8762222 344555

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.38  E-value=5.8e-07  Score=74.85  Aligned_cols=77  Identities=25%  Similarity=0.378  Sum_probs=63.5

Q ss_pred             cCceEEEEEeeceeEEEEeCcCC--CCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          323 VPNMVKFEDVRATSLTVVLGSED--PSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~--~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      ++..+++..++++||+|-+....  .....|.||.|.||.....    ...++....+.+.|.||.|.|.|.|+|.+++.
T Consensus        11 ~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~----~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   86 (103)
T 2edy_A           11 FPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQ----QELQNITTDTRFTLTGLKPDTTYDIKVRAWTS   86 (103)
T ss_dssp             CCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSC----CEEEEEESSSCCEECSCCTTCCEEEECCEECS
T ss_pred             CCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCC----ccEEEcCCcceEEEcCCCCCCEEEEEEEEECC
Confidence            44578889999999999998873  3456899999999987652    23455677899999999999999999999998


Q ss_pred             Ccc
Q 005110          401 TTE  403 (714)
Q Consensus       401 ~~e  403 (714)
                      .|.
T Consensus        87 ~G~   89 (103)
T 2edy_A           87 KGS   89 (103)
T ss_dssp             SCB
T ss_pred             CCC
Confidence            876

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.38  E-value=4.8e-06  Score=74.02  Aligned_cols=93  Identities=16%  Similarity=0.210  Sum_probs=65.7

Q ss_pred             CCcccCceEEEEEeeceeEEEEeCcCCCCCC----CcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEE
Q 005110          319 SNVIVPNMVKFEDVRATSLTVVLGSEDPSPG----NIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFK  394 (714)
Q Consensus       319 ~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~----~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fk  394 (714)
                      ....++-.++...++++||.|-+........    ++.||.|.||.....  .....++....+.++|.||.|.|+|.|+
T Consensus        17 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~--~~~~~~~~~~~~~~~v~gL~P~T~Y~f~   94 (123)
T 2edd_A           17 TPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSA--SAKYKSEDTTSLSYTATGLKPNTMYEFS   94 (123)
T ss_dssp             CSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCT--TCCCCCEEESSSEEEEESCCTTCEEEEE
T ss_pred             CCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCC--CccEEEEeCCceEEEecCCCCCCEEEEE
Confidence            3445667799999999999999985542222    345999999886321  1111234445899999999999999999


Q ss_pred             EEeccCCccCcce--eeEEecC
Q 005110          395 VVSSNGTTELGRC--EIWFSTG  414 (714)
Q Consensus       395 vvsF~~~~elg~~--E~k~~T~  414 (714)
                      |.+|++.|+ |.|  .+.+.|.
T Consensus        95 V~A~n~~g~-g~~S~~v~~~T~  115 (123)
T 2edd_A           95 VMVTKNRRS-STWSMTAHATTY  115 (123)
T ss_dssp             EEECCSSSC-CCCCCCEEEECC
T ss_pred             EEEeCCCcc-cCCCCCEEEEcc
Confidence            999998765 432  3455553

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.38  E-value=1.8e-06  Score=75.71  Aligned_cols=84  Identities=18%  Similarity=0.251  Sum_probs=61.3

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCC----CCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEE
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSP----GNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVV  396 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~----~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvv  396 (714)
                      ..++-.++.+.++++||.|-+.-.....    .++.||.|+||....  ......++....+.++|.||.|.|+|.|+|.
T Consensus         9 p~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~--~~~~~~~~~~~~~~~~i~gL~P~T~Y~f~V~   86 (113)
T 1x5j_A            9 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIP--ANTKYKNANATTLSYLVTGLKPNTLYEFSVM   86 (113)
T ss_dssp             CCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSS--SSCCCEECCBCSSEEEEESCCTTCEECCEEE
T ss_pred             CCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCC--CCeEEEEEecCcCEEEeCCCCCCcEEEEEEE
Confidence            3455679999999999999987654322    345699999997311  1111223345688999999999999999999


Q ss_pred             eccCCccCcce
Q 005110          397 SSNGTTELGRC  407 (714)
Q Consensus       397 sF~~~~elg~~  407 (714)
                      +|+..|. |.|
T Consensus        87 A~~~~G~-g~~   96 (113)
T 1x5j_A           87 VTKGRRS-STW   96 (113)
T ss_dssp             EECSSCB-CCC
T ss_pred             EecCCcc-CCC
Confidence            9997764 544

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}

Probab=98.37  E-value=1.3e-06  Score=73.79  Aligned_cols=78  Identities=15%  Similarity=0.231  Sum_probs=61.6

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      .++..+++.+++++||.|-.+..   ...|.||+|.|+.....- ..-...+...++.+.|.||.|.|+|.|+|.+++..
T Consensus         6 ~~P~~l~v~~~t~~Si~lsW~~p---~~~i~~Y~v~y~~~~~~~-~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~~~   81 (97)
T 3qht_C            6 SVPTKLEVVAATPTSLLISWDAS---SSSVSYYRITYGETGGNS-PVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSY   81 (97)
T ss_dssp             CSSSSCEEEEEETTEEEEECCCC---CSSCCEEEEEEEESSSCS-CCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEEE
T ss_pred             CCCCceEEEecCCCEEEEEEeCC---CCCCCEEEEEEEECCCCC-ccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCC
Confidence            34556899999999999999864   257999999998765431 01123456678999999999999999999999987


Q ss_pred             cc
Q 005110          402 TE  403 (714)
Q Consensus       402 ~e  403 (714)
                      |+
T Consensus        82 G~   83 (97)
T 3qht_C           82 YD   83 (97)
T ss_dssp             TT
T ss_pred             cc
Confidence            75

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.36  E-value=3e-06  Score=73.00  Aligned_cols=87  Identities=24%  Similarity=0.274  Sum_probs=67.8

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      +..+++..++++||+|-++....  ....|.||+|.||.....   ....++....+.+.|.||.|.|.|.|+|.+++..
T Consensus        32 P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~  108 (124)
T 2ed9_A           32 PQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRR---GEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVN  108 (124)
T ss_dssp             CBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSS---CCEEEECSSCSEEEEECCCSSCEEEECEEEECSS
T ss_pred             CeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCC---cceEEecCCcCEEEEcCCCCCCEEEEEEEEEcCC
Confidence            44788999999999999988765  456799999999987654   1123466788999999999999999999999998


Q ss_pred             ccCccee-eEEec
Q 005110          402 TELGRCE-IWFST  413 (714)
Q Consensus       402 ~elg~~E-~k~~T  413 (714)
                      |.=-.++ +.+.|
T Consensus       109 G~g~~S~~~~~~T  121 (124)
T 2ed9_A          109 GTGPPSNWYTAET  121 (124)
T ss_dssp             CBCCCCCCEEEEC
T ss_pred             ccCCCCCCEEEEC
Confidence            7533333 44444

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=4.9e-07  Score=77.48  Aligned_cols=87  Identities=16%  Similarity=0.106  Sum_probs=66.9

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++.+++++||.|-++...   ..|.||.|.|+.....- ..-...+...++.+.|.||.|.|+|.|+|.+++..|
T Consensus        10 ~P~~l~v~~~t~~si~lsW~~p~---g~i~~Y~v~y~~~~~~~-~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~g   85 (105)
T 2ekj_A           10 PPSNLALASETPDSLQVSWTPPL---GRVLHYWLTYAPASGLG-PEKSVSVPGARSHVTLPDLQAATKYRVLVSAIYAAG   85 (105)
T ss_dssp             CCEEEEEEEEETTEEEEEEECCS---SCCSBBCBBCCCTTSCS-CCCCBCCBTTSSEEEECSCCSSCCCBCBBCBBCSSC
T ss_pred             CCCceEEEeCCCCEEEEEEeCCC---CcceEEEEEEEECCCCC-ccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCc
Confidence            45578999999999999998763   57999999998765430 111234556789999999999999999999999887


Q ss_pred             cCcceeeEEec
Q 005110          403 ELGRCEIWFST  413 (714)
Q Consensus       403 elg~~E~k~~T  413 (714)
                      .-........|
T Consensus        86 ~g~~s~~~~~T   96 (105)
T 2ekj_A           86 RSEAVSATGQT   96 (105)
T ss_dssp             BCCCBCCBCCC
T ss_pred             cCCccccEEEc
Confidence            65555554444

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.35  E-value=1.7e-06  Score=75.57  Aligned_cols=88  Identities=9%  Similarity=-0.004  Sum_probs=66.0

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++.+++ +||+|-++........|.||.|.|+....   .....++....+.++|.||.|.|+|.|+|.+++..|
T Consensus        20 ~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~---~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G   95 (116)
T 2edb_A           20 QPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP---YAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAG   95 (116)
T ss_dssp             CCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESST---TSEEEEEETTCCEEEECSCCSSSBEEEEEEEEETTE
T ss_pred             CCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCC---CeEEEEeCCCeeEEEeCCCCCCCEEEEEEEEEeCCc
Confidence            34578999999 99999998765444569999999986321   223345567789999999999999999999999988


Q ss_pred             cCcceeeEEecC
Q 005110          403 ELGRCEIWFSTG  414 (714)
Q Consensus       403 elg~~E~k~~T~  414 (714)
                      .=-.....+.|.
T Consensus        96 ~g~~~~~~~~T~  107 (116)
T 2edb_A           96 EGVPLYESATTR  107 (116)
T ss_dssp             ECSCEEECCBCC
T ss_pred             cCCCCcceeecc
Confidence            533444444443

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.34  E-value=3.9e-06  Score=69.98  Aligned_cols=87  Identities=24%  Similarity=0.263  Sum_probs=64.0

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++-.+++.+++++||+|-+...  ....|.||.|.||.....  ..-..+.....+++.|.||.|.|+|.|||.+++..|
T Consensus        10 ~P~~~~~~~~~~~sv~l~W~~~--~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   85 (106)
T 2dju_A           10 PPIDLVVTETTATSVTLTWDSG--NSEPVTYYGIQYRAAGTE--GPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIG   85 (106)
T ss_dssp             CCEEEEEEEEETTEEEEEEECC--CSSCCSEEEEEEEETTCC--SCCCCBCCCCSSEEEEESCCTTCEEEEEEEEECSSC
T ss_pred             CCCCcEEEeccCCEEEEEEcCC--CCCCceEEEEEEEECCCC--CCeEEccCCCccEEEEeCCCCCcEEEEEEEEEeCCc
Confidence            3446889999999999998854  346799999999887643  011112234678999999999999999999999988


Q ss_pred             cCccee-eEEec
Q 005110          403 ELGRCE-IWFST  413 (714)
Q Consensus       403 elg~~E-~k~~T  413 (714)
                      .-..++ +.+.|
T Consensus        86 ~~~~S~~~~~~T   97 (106)
T 2dju_A           86 RGPPSEAVRART   97 (106)
T ss_dssp             BCCCCCCEEEEC
T ss_pred             cCCCcccEEeEc
Confidence            544444 34444

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.33  E-value=2.8e-06  Score=73.01  Aligned_cols=86  Identities=20%  Similarity=0.195  Sum_probs=66.1

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +..+++.+++++||+|.+.........|.||.|.|+.....- ..-...+....+.+.|.||.|.|.|.|||.+++..|.
T Consensus        21 P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   99 (119)
T 1wfn_A           21 VGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTN-TRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQ   99 (119)
T ss_dssp             CSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGG-GCCCEEECSSCCEEEEESCCTTCEEEEEEEEECSSCE
T ss_pred             CCceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCC-ceEEEEeCCCceEEEEcCCCCCCEEEEEEEEEcCCcc
Confidence            346899999999999999876644556999999999875421 0112345567889999999999999999999999886


Q ss_pred             CcceeeE
Q 005110          404 LGRCEIW  410 (714)
Q Consensus       404 lg~~E~k  410 (714)
                      =..++..
T Consensus       100 g~~S~~~  106 (119)
T 1wfn_A          100 GQVSAST  106 (119)
T ss_dssp             EEEEEEE
T ss_pred             CCCCCCE
Confidence            3344444

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.31  E-value=1.6e-06  Score=73.89  Aligned_cols=90  Identities=22%  Similarity=0.233  Sum_probs=66.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++..++++||+|-+.........|.||.|.|+....... ....++....+.+.|.||.|.|.|.|||.+++..|
T Consensus        20 ~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   98 (119)
T 2ed7_A           20 APRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRE-RALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWG   98 (119)
T ss_dssp             CCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCC-EEEECCCTTCCEEEECSCCSSSEEEECCEEEESSC
T ss_pred             CCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcc-eeeEeecCCceEEEeCCCCCCCEEEEEEEEEcCCc
Confidence            34468899999999999998765445569999999998755311 11112335688999999999999999999999988


Q ss_pred             cCccee-eEEec
Q 005110          403 ELGRCE-IWFST  413 (714)
Q Consensus       403 elg~~E-~k~~T  413 (714)
                      .=..++ +.+.|
T Consensus        99 ~g~~S~~~~~~T  110 (119)
T 2ed7_A           99 PGESSQPIKVAT  110 (119)
T ss_dssp             BCSCCCCEEEEC
T ss_pred             cCCCcCCEEEEe
Confidence            433343 44444

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.29  E-value=9.6e-07  Score=77.26  Aligned_cols=91  Identities=9%  Similarity=0.087  Sum_probs=65.9

Q ss_pred             cCceEEEE-EeeceeEEEEeCcCC--CCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          323 VPNMVKFE-DVRATSLTVVLGSED--PSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       323 ~~~~~rFE-~vt~tSv~vvL~~~~--~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      ++-.+++. +++++||+|-.+...  .....|.||+|.|+.....-..+-+..+....+.+.|.||.|.|.|.|||.+|+
T Consensus        21 ~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n  100 (124)
T 2dbj_A           21 APLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGSRARISVQVHNATCTVRIAAVT  100 (124)
T ss_dssp             CCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEEEESTTSCEEEECCCSSSEEEECEEEEE
T ss_pred             CCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEEeCCCcceEEecCCCCCCEEEEEEEEEC
Confidence            34467888 699999999998873  345579999999975322111112223456788999999999999999999999


Q ss_pred             CCccCcce--eeEEecC
Q 005110          400 GTTELGRC--EIWFSTG  414 (714)
Q Consensus       400 ~~~elg~~--E~k~~T~  414 (714)
                      ..|. |.+  .+.+.|.
T Consensus       101 ~~G~-Gp~S~~~~~~T~  116 (124)
T 2dbj_A          101 RGGV-GPFSDPVKIFIP  116 (124)
T ss_dssp             SSCB-CCCCCCEEEECC
T ss_pred             CCcc-CCCCCCEEEEcC
Confidence            9886 532  3555554

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}

Probab=98.29  E-value=1.5e-06  Score=77.47  Aligned_cols=80  Identities=18%  Similarity=0.221  Sum_probs=62.3

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          320 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       320 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      .+.++..+++.+++++||.|-++...   ..|.||+|.|+....... .-...+....+.+.|.||.|.|+|.|+|.+|+
T Consensus        28 p~~~P~~l~v~~~t~~Si~lsW~~p~---~~i~~Y~V~y~~~~~~~~-~~~~~v~~~~t~~~l~gL~P~t~Y~~~V~A~~  103 (121)
T 2ocf_D           28 VSDVPTKLEVVAATPTSLLISWDAPA---VTVRYYRITYGETGGNSP-VQEFTVPGSKSTATISGLKPGVDYTITVYAVT  103 (121)
T ss_dssp             -CCSCEEEEEEEECSSCEEEEEECCS---SCCCEEEEEEEETTTCSC-BEEEEEETTCCEEEECCCCTTCEEEEEEEEEC
T ss_pred             CCCCCCccEEEecCCCEEEEEEcCCC---CCCcEEEEEEEECCCCCc-cEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence            34566789999999999999996553   359999999988754211 11234566789999999999999999999999


Q ss_pred             CCcc
Q 005110          400 GTTE  403 (714)
Q Consensus       400 ~~~e  403 (714)
                      ..|.
T Consensus       104 ~~G~  107 (121)
T 2ocf_D          104 GLRL  107 (121)
T ss_dssp             CHHH
T ss_pred             CCCc
Confidence            8764

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*

Probab=98.28  E-value=3.5e-06  Score=74.60  Aligned_cols=76  Identities=20%  Similarity=0.254  Sum_probs=61.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++.+++++||+|-+...   ...|.||.|-|+.....- ..-...+....+.+.|.||.|.|+|.|+|.+++..|
T Consensus         6 ~P~~L~v~~~t~~Sv~lsW~~p---~g~i~~Y~v~y~~~~~~~-~~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~~~~G   81 (114)
T 3qwq_B            6 VPRDLEVVAATPTSLLISWDSG---RGSYQYYRITYGETGGNS-PVQEFTVPGPVHTATISGLKPGVDYTITVYAVTDHK   81 (114)
T ss_dssp             CCEEEEEEEEETTEEEEEEECC---SCCCSEEEEEEEESSCSS-CCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEEEE
T ss_pred             CCCceEEEecCCCEEEEEEcCC---cCcccEEEEEEEECCCCC-ccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEECCc
Confidence            4457899999999999999764   357999999999865431 011234567789999999999999999999999998

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.26  E-value=2.6e-06  Score=75.40  Aligned_cols=89  Identities=15%  Similarity=0.083  Sum_probs=67.0

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++..++ +||+|-..........|.||.|.|+....   ......+...++.++|.||.|.|+|.|+|.+|+..|
T Consensus        30 ~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~~~---~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G  105 (126)
T 1x5i_A           30 VPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGIGSP---HAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVG  105 (126)
T ss_dssp             SCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECSSCG---GGEEEECCTTCCEEEECSCCSSCEECCEEEEECSSC
T ss_pred             CCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEcCCC---CceEEEeCCCeeEEEEeCCCCCCEEEEEEEEEeCCc
Confidence            34578999997 99999998775444569999999985321   112234456678999999999999999999999988


Q ss_pred             cCcceeeEEecCc
Q 005110          403 ELGRCEIWFSTGS  415 (714)
Q Consensus       403 elg~~E~k~~T~s  415 (714)
                      .=-.++..+.|..
T Consensus       106 ~g~~s~~~~~T~~  118 (126)
T 1x5i_A          106 EGIPLYESAVTRP  118 (126)
T ss_dssp             BCCCCCCCEECCC
T ss_pred             cCcceeeEEeccc
Confidence            6555566666653

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.26  E-value=4.9e-06  Score=71.02  Aligned_cols=85  Identities=16%  Similarity=0.107  Sum_probs=63.5

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  405 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  405 (714)
                      .+++.+++++||+|-+.........|.||.|-|+.....+    ..+...+.+++.|.||.|.|.|.|||.+++..|.=-
T Consensus        13 ~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~----~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~   88 (106)
T 1x4x_A           13 PPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSM----QICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGP   88 (106)
T ss_dssp             CCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSC----CEEEEESCSEEEEESCCSSCEEEEEEEEECSSCCCC
T ss_pred             CCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCce----EEEEeCCcceEEEcCCCCCCEEEEEEEEEcCCcCCC
Confidence            4667899999999999876543346999999998764322    234456788999999999999999999999987532


Q ss_pred             ce-eeEEecC
Q 005110          406 RC-EIWFSTG  414 (714)
Q Consensus       406 ~~-E~k~~T~  414 (714)
                      .+ .+.+.|.
T Consensus        89 ~S~~v~~~T~   98 (106)
T 1x4x_A           89 FSEVVACVTP   98 (106)
T ss_dssp             BCCCEEEECC
T ss_pred             CcCCEEEECC
Confidence            22 3455554

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.26  E-value=6.2e-06  Score=70.02  Aligned_cols=85  Identities=21%  Similarity=0.232  Sum_probs=62.3

Q ss_pred             EEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 005110          327 VKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  405 (714)
Q Consensus       327 ~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  405 (714)
                      .++.+++++||+|-+...... ...|.||.|-||.....  ..-.-+.....+.+.|.||.|.|+|.|||.+++..|.-.
T Consensus        14 p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~   91 (109)
T 1x5x_A           14 PVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSG--YGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSN   91 (109)
T ss_dssp             CEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSS--CCCEEEEEESCSEEEEESCCSSCEEEEEEEEECSSCEEE
T ss_pred             CEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCC--cceEEeEeCCccEEEECCCCCCCEEEEEEEEEeCCCCcC
Confidence            457899999999999877543 44799999999877542  111123344588999999999999999999999988633


Q ss_pred             cee-eEEec
Q 005110          406 RCE-IWFST  413 (714)
Q Consensus       406 ~~E-~k~~T  413 (714)
                      .++ +.+.|
T Consensus        92 ~S~~~~~~T  100 (109)
T 1x5x_A           92 PSEVVEFTT  100 (109)
T ss_dssp             ECCCEEEEC
T ss_pred             CccCEEeEe
Confidence            333 34444

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.23  E-value=3.8e-06  Score=74.01  Aligned_cols=79  Identities=18%  Similarity=0.243  Sum_probs=59.9

Q ss_pred             eEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          326 MVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      ..++.+|+.+||+|....... -...|.||.|-||..... +..-  .......+.+.|+||.|.|+|.|||.+++..|.
T Consensus        16 ~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~--~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~   93 (112)
T 1bpv_A           16 KPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKA--NFSNILENEFTVSGLTEDAAYEFRVIAKNAAGA   93 (112)
T ss_dssp             CCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEEC--CCSCCCSSEEEECSCCSSCCEEEEEEEECTTSC
T ss_pred             CCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEe--ecccCccCEEEECCCCCCCEEEEEEEEEECCCC
Confidence            456779999999999985543 345699999999986543 2110  012345789999999999999999999999998


Q ss_pred             Ccc
Q 005110          404 LGR  406 (714)
Q Consensus       404 lg~  406 (714)
                      +|.
T Consensus        94 ~s~   96 (112)
T 1bpv_A           94 ISP   96 (112)
T ss_dssp             EEE
T ss_pred             CCC
Confidence            664

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.23  E-value=8.4e-06  Score=69.96  Aligned_cols=89  Identities=19%  Similarity=0.291  Sum_probs=65.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++.+++++||+|-..........|.+|.|-||.....  ..-.-+...+.+.+.|.||.|.|.|.|||.+++..|
T Consensus        20 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G   97 (118)
T 1x3d_A           20 IPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN--GEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYG   97 (118)
T ss_dssp             CCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSS--SCCEEEEEESCSEEEEESCCTTCEEEEECCEEESSC
T ss_pred             CCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCC--CCeEEeeccCCcEEEeCCCCCCCEEEEEEEEEECCC
Confidence            334678999999999999887754456699999999876542  111223445678999999999999999999999988


Q ss_pred             cCccee-eEEec
Q 005110          403 ELGRCE-IWFST  413 (714)
Q Consensus       403 elg~~E-~k~~T  413 (714)
                      .-..++ +.+.|
T Consensus        98 ~s~~S~~~~~~T  109 (118)
T 1x3d_A           98 TSGFSEEVLYYT  109 (118)
T ss_dssp             BCCCCCCEEEEC
T ss_pred             CCCCccCEEEEc
Confidence            544444 33444

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.20  E-value=6.9e-06  Score=73.09  Aligned_cols=92  Identities=16%  Similarity=0.133  Sum_probs=70.7

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-C-----CCCC-ceeeecCCceeEeecCCcceeee
Q 005110          320 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-F-----PARP-TCTLFAPNTRFVVTGLCPATEYQ  392 (714)
Q Consensus       320 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y-----~~ep-t~~~~~p~~r~~vs~L~P~TEY~  392 (714)
                      ..++...+++.++|++||+|-+.-.   ...|.+|.|=|+..... .     +.++ ...+...++.+.|+||.|.|+|.
T Consensus         8 ~pp~p~~L~v~~~T~~Si~LsW~~p---~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t~~~l~gL~PgT~Y~   84 (112)
T 2cui_A            8 SRPRLSQLSVTDVTTSSLRLNWEAP---PGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYS   84 (112)
T ss_dssp             CCCCCCCCEEESCCSSCEEEECCCC---TTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEE
T ss_pred             CCCCCCceEEEeecCCeEEEEECCC---CCCccEEEEEEEeCCCCccccccccCcceEEEcCCCcCEEEeCCCCCCCEEE
Confidence            3456678999999999999999854   35699999999876432 1     1112 34567788999999999999999


Q ss_pred             EEEEeccCCccCcceeeEEecC
Q 005110          393 FKVVSSNGTTELGRCEIWFSTG  414 (714)
Q Consensus       393 fkvvsF~~~~elg~~E~k~~T~  414 (714)
                      |.|.++++.++-........|.
T Consensus        85 ~~V~A~~~~~~s~p~~~~~~T~  106 (112)
T 2cui_A           85 LTLYGLRGPHKADSIQGTARTL  106 (112)
T ss_dssp             EEEEEECSSSEEEEEEEEEECC
T ss_pred             EEEEEEECCcccCCEEEEEEEC
Confidence            9999999877665666666663

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1

Probab=98.19  E-value=2.9e-06  Score=72.32  Aligned_cols=88  Identities=20%  Similarity=0.262  Sum_probs=61.6

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCC-cceEEEEeeecCCC-CCCCCceee--ecCCceeEeecCCcceeeeEEEEecc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGN-IISYTLWHRRAHEG-FPARPTCTL--FAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~-i~Gy~LWhrks~~~-y~~ept~~~--~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      +..++++.++.+ |+|-.+........ |.||.|.||..... .... ...+  ..+.+.+.|.||.|.|+|.|||.+++
T Consensus        10 P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n   87 (105)
T 2haz_A           10 PSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK-WYDAKEASMEGIVTIVGLKPETTYAVRLAALN   87 (105)
T ss_dssp             CEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEE-EEEHHHHHHHSEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccc-eEEccccCCccEEEECCCCCCCEEEEEEEEEc
Confidence            346778888888 88888876544444 99999999987543 2111 0112  22578999999999999999999999


Q ss_pred             CCccCcce-eeEEec
Q 005110          400 GTTELGRC-EIWFST  413 (714)
Q Consensus       400 ~~~elg~~-E~k~~T  413 (714)
                      ..|.=-.+ .+.|.|
T Consensus        88 ~~G~g~~S~~~~~~T  102 (105)
T 2haz_A           88 GKGLGEISAASEFKT  102 (105)
T ss_dssp             TTEECCCCCCEEEEC
T ss_pred             CCccCCCcCCEeeEE
Confidence            98742222 334555

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.18  E-value=5.1e-06  Score=72.00  Aligned_cols=78  Identities=19%  Similarity=0.195  Sum_probs=58.8

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCC-C-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHE-G-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~-~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      -.+++.+++++||+|-..........|.||.|.||.... . +..- .-.+....+.+.|.||.|.|+|.|||.+++..|
T Consensus        22 ~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~-~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G  100 (121)
T 1x4z_A           22 DRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILA-TSAIPPSRLSVEITGLEKGISYKFRVRALNMLG  100 (121)
T ss_dssp             CCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEE-EEEECTTCCEEEEESCCTTCEEEEEEEEEETTE
T ss_pred             CCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEe-ecccCCCcCEEEECCCCCCCEEEEEEEEEcCCC
Confidence            357889999999999998433334559999999998752 2 2111 011245678999999999999999999999877


Q ss_pred             c
Q 005110          403 E  403 (714)
Q Consensus       403 e  403 (714)
                      .
T Consensus       101 ~  101 (121)
T 1x4z_A          101 E  101 (121)
T ss_dssp             E
T ss_pred             c
Confidence            4

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.18  E-value=7.4e-06  Score=69.84  Aligned_cols=77  Identities=23%  Similarity=0.267  Sum_probs=59.9

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecC-CC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAH-EG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~-~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      +..+++.++++++|+|.+.........|.||.|.||... .. +.   ........+++.|.||.|.|+|.|||.+++..
T Consensus        19 P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~---~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~   95 (117)
T 1uem_A           19 PSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQ---TVANHVKTTLYTVRGLRPNTIYLFMVRAINPQ   95 (117)
T ss_dssp             CCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEE---EEEEEECSSEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCcee---EcccccCcCEEEECCCCCCCEEEEEEEEECCC
Confidence            346788899999999999876544456999999998764 21 21   11124478899999999999999999999987


Q ss_pred             cc
Q 005110          402 TE  403 (714)
Q Consensus       402 ~e  403 (714)
                      |.
T Consensus        96 G~   97 (117)
T 1uem_A           96 GL   97 (117)
T ss_dssp             EE
T ss_pred             cc
Confidence            64

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.17  E-value=6e-06  Score=70.48  Aligned_cols=78  Identities=22%  Similarity=0.201  Sum_probs=59.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      +..+++.+++.+||+|........ ...|.||.|.||..... +..-  .......+.+.|.||.|.|+|.|||.+++..
T Consensus        12 P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~--~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~   89 (111)
T 1x5y_A           12 PQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPA--NKEPVERCGFTVKDLPTGARILFRVVGVNIA   89 (111)
T ss_dssp             CEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEES--SSSCBSSSEEEEECCCTTCCEEEEEEEEETT
T ss_pred             CCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEc--cccCCcccEEEECCCCCCCEEEEEEEEEcCC
Confidence            346889999999999999876533 34599999999876543 2110  0112457899999999999999999999987


Q ss_pred             cc
Q 005110          402 TE  403 (714)
Q Consensus       402 ~e  403 (714)
                      |.
T Consensus        90 G~   91 (111)
T 1x5y_A           90 GR   91 (111)
T ss_dssp             EE
T ss_pred             cC
Confidence            76

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}

Probab=98.17  E-value=5.5e-06  Score=70.24  Aligned_cols=75  Identities=12%  Similarity=0.007  Sum_probs=58.7

Q ss_pred             ceEEEEE--eeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          325 NMVKFED--VRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       325 ~~~rFE~--vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      -.++++.  ++++||+|-.+........|.||.|.||.....   ... ++....+.++|.||.|.|+|.|||.+++..|
T Consensus        12 ~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~---~~~-~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G   87 (108)
T 2dm4_A           12 RNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSK---MWA-SQRAASNFTEIKNLLVNTLYTVRVAAVTSRG   87 (108)
T ss_dssp             EEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCS---CCE-EEEESSSEEEECSCCSSCEEEEEEEEEESSC
T ss_pred             cCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCC---CeE-EecCCccEEEeCCCCCCCEEEEEEEEECCCc
Confidence            3465555  689999999987764455699999999987653   111 3345678999999999999999999999877


Q ss_pred             c
Q 005110          403 E  403 (714)
Q Consensus       403 e  403 (714)
                      .
T Consensus        88 ~   88 (108)
T 2dm4_A           88 I   88 (108)
T ss_dssp             E
T ss_pred             e
Confidence            4

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1

Probab=98.16  E-value=2.2e-06  Score=75.71  Aligned_cols=76  Identities=12%  Similarity=0.151  Sum_probs=52.2

Q ss_pred             EEEeeceeEEEEeCcCCCCCCCcceEEEEeeec-CCC-CCCCCcee---------eecCCceeEeecCCcceeeeEEEEe
Q 005110          329 FEDVRATSLTVVLGSEDPSPGNIISYTLWHRRA-HEG-FPARPTCT---------LFAPNTRFVVTGLCPATEYQFKVVS  397 (714)
Q Consensus       329 FE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks-~~~-y~~ept~~---------~~~p~~r~~vs~L~P~TEY~fkvvs  397 (714)
                      +.+|+.+||+|-..........|.||.|.||.. ... +..--..+         +....+++.|.||.|.|+|.|||++
T Consensus        11 v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~A   90 (115)
T 2ic2_A           11 VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA   90 (115)
T ss_dssp             EEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred             eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCCCCEEEEEEEE
Confidence            789999999999887654346699999999987 222 22110101         1123468999999999999999999


Q ss_pred             ccCCccC
Q 005110          398 SNGTTEL  404 (714)
Q Consensus       398 F~~~~el  404 (714)
                      .|..|.-
T Consensus        91 ~N~~G~~   97 (115)
T 2ic2_A           91 VYSNNDN   97 (115)
T ss_dssp             EETTSCE
T ss_pred             EeCCCCC
Confidence            9988753

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.14  E-value=2.6e-06  Score=74.10  Aligned_cols=90  Identities=19%  Similarity=0.227  Sum_probs=68.2

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      +-.+++..++++||+|-+.....  ....|.||+|.||..... ....  .++....+.++|.||.|.|.|.|+|.+++.
T Consensus        22 P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   99 (132)
T 1x5h_A           22 PQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTE--TLVSGTQLSQLIEGLDRGTEYNFRVAALTI   99 (132)
T ss_dssp             CEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEEC--CBCCTTCCEEEEECCCSSCEEEEECEEEET
T ss_pred             CeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEE--EEeCCCccEEEeCCCCCCCEEEEEEEEEcC
Confidence            34789999999999999987764  456799999999987543 1111  125567889999999999999999999999


Q ss_pred             CccCccee-eEEecCc
Q 005110          401 TTELGRCE-IWFSTGS  415 (714)
Q Consensus       401 ~~elg~~E-~k~~T~s  415 (714)
                      .|.=-.++ +.+.|..
T Consensus       100 ~G~g~~S~~~~~~T~~  115 (132)
T 1x5h_A          100 NGTGPATDWLSAETFE  115 (132)
T ss_dssp             TEEEEECCCEEEECCS
T ss_pred             CccCCCCcCEEeEcCc
Confidence            87433333 5566653

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A

Probab=98.13  E-value=1.1e-05  Score=75.39  Aligned_cols=87  Identities=16%  Similarity=0.194  Sum_probs=68.3

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      ++..+++..++++||+|-++...  ...|.||.|.|+..... ..  ....+....+.+.|+||.|.|+|.|+|.++++.
T Consensus       116 ~P~~l~~~~~~~~sv~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~  191 (203)
T 2gee_A          116 PPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDV--AELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQ  191 (203)
T ss_dssp             CCEEEEEEEEETTEEEEEEECCS--SCCCSEEEEEEEETTCGGGC--EEEEECTTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCceEEEEcCCCEEEEEEcCCC--CCCccEEEEEEEECCCCCcc--EEEEcCCCcCEEEECCCCCCCEEEEEEEEecCC
Confidence            45678999999999999988764  34799999999986543 11  133456678999999999999999999999988


Q ss_pred             ccCcceeeEEec
Q 005110          402 TELGRCEIWFST  413 (714)
Q Consensus       402 ~elg~~E~k~~T  413 (714)
                      |+=....+...|
T Consensus       192 g~s~p~~~~~~T  203 (203)
T 2gee_A          192 HESTPLRGRQKT  203 (203)
T ss_dssp             EECCCEEEEEEC
T ss_pred             CcCCCeeeEEcC
Confidence            776666666554

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.13  E-value=3e-06  Score=74.30  Aligned_cols=86  Identities=13%  Similarity=0.089  Sum_probs=61.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecC---CC-CCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAH---EG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~---~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      ++..+++.+++++||+|-+.........|.||.|-||...   .. +..--+..+....+.+.|.||.|.|+|.|||.++
T Consensus        20 ~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~   99 (124)
T 1wis_A           20 PPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQV   99 (124)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCEEE
T ss_pred             cCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCEEEEEEEEE
Confidence            4446889999999999999544334456999999998742   21 2110000013457899999999999999999999


Q ss_pred             cCCccCccee
Q 005110          399 NGTTELGRCE  408 (714)
Q Consensus       399 ~~~~elg~~E  408 (714)
                      +..|.-..++
T Consensus       100 N~~G~s~~S~  109 (124)
T 1wis_A          100 NIVGTSPPSQ  109 (124)
T ss_dssp             CSSCBCCCCC
T ss_pred             ECCccCCCcC
Confidence            9987644444

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A

Probab=98.12  E-value=1.2e-05  Score=74.59  Aligned_cols=88  Identities=19%  Similarity=0.206  Sum_probs=69.1

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  404 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  404 (714)
                      ..++...+++++|+|-+...+.....|.||.|.||......  .....+....+.+.|.||.|.|.|.|||.+++..|+=
T Consensus       114 ~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s  191 (209)
T 2vkw_A          114 KLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEW--KPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKS  191 (209)
T ss_dssp             EEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCC--CCCEEECTTCCEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred             cccccccccCCeEEEEEECcccCCCCCceEEEEEECCCCCC--ceeeecCCCccEEEecCCCCCCEEEEEEEEEeCCccC
Confidence            35778889999999999886445678999999999832222  2233445566899999999999999999999999986


Q ss_pred             cceeeEEecC
Q 005110          405 GRCEIWFSTG  414 (714)
Q Consensus       405 g~~E~k~~T~  414 (714)
                      ..++....|.
T Consensus       192 ~~S~~~~~~~  201 (209)
T 2vkw_A          192 KAAHFVFRTA  201 (209)
T ss_dssp             CCEEEEEECC
T ss_pred             Ccchhhhhhh
Confidence            6777777664

>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A

Probab=98.11  E-value=1.4e-05  Score=75.49  Aligned_cols=81  Identities=15%  Similarity=0.164  Sum_probs=61.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++++++++|++|-++...   ..|.||+|.|+..... .......+....+.+.|+||.|.|+|.|+|.+++..|
T Consensus       106 ~P~~l~v~~~t~~si~l~W~~p~---~~i~~Y~v~y~~~~~~-~~~~~~~v~~~~t~~~l~gL~p~t~Y~~~V~A~~~~G  181 (195)
T 2qbw_A          106 VPTNLEVVAATPTSLLISWDASY---YGVSYYRITYGETGGN-SPVQEFTVPYSSSTATISGLKPGVDYTITVYAYSDYY  181 (195)
T ss_dssp             SSCCCEEEEEETTEEEEECCCCC---SSCSEEEEEEEETTCC-SCCEEEEEETTCSEEEECSCCTTCEEEEEEEEESSTT
T ss_pred             CCcccEEEeCCCCEEEEEEeCCC---CCccEEEEEEEECCCC-CcceEEEeCCCCCEEEeCCCCCCCEEEEEEEEEeCCc
Confidence            34578899999999999986543   5699999988776432 1122334566679999999999999999999999887


Q ss_pred             cCcce
Q 005110          403 ELGRC  407 (714)
Q Consensus       403 elg~~  407 (714)
                      .=-.+
T Consensus       182 ~g~~S  186 (195)
T 2qbw_A          182 GSHHY  186 (195)
T ss_dssp             SSCBC
T ss_pred             cCCCC
Confidence            64333

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.10  E-value=1.6e-05  Score=69.23  Aligned_cols=90  Identities=18%  Similarity=0.171  Sum_probs=62.3

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      +..+++.+++++||+|-+.........|.||.|-||..... ...- ............|.||.|.|+|.|||.+++..|
T Consensus        20 P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~-~~~w~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~G   98 (127)
T 1uey_A           20 PFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHK-PGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIG   98 (127)
T ss_dssp             CEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTC-TTCEEEEEEEESSCCEEEECCCTTCEECCEEEEEESSC
T ss_pred             CCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCC-CCccEEEeeeCCCceEEEecCCCCCEEEEEEEEEeCCc
Confidence            34588999999999999985533456799999999876421 0100 111122233446889999999999999999988


Q ss_pred             cCcceee--EEecC
Q 005110          403 ELGRCEI--WFSTG  414 (714)
Q Consensus       403 elg~~E~--k~~T~  414 (714)
                      .-..++.  .+.|.
T Consensus        99 ~s~~S~~~~~~~T~  112 (127)
T 1uey_A           99 KSLPSEASEQYLTK  112 (127)
T ss_dssp             BCCCCSCCCCEECC
T ss_pred             cCCccccccceEcC
Confidence            6555554  45554

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1

Probab=98.10  E-value=1.4e-05  Score=72.76  Aligned_cols=85  Identities=21%  Similarity=0.261  Sum_probs=67.4

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  404 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  404 (714)
                      ..+++.+++++||+|-+....   ..|.||.|.|+.....  ..-...+....+.+.|+||.|.|+|.|+|.++++.|+=
T Consensus        99 ~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s  173 (186)
T 1qr4_A           99 KGISFSDITENSATVSWTPPR---SRVDSYRVSYVPITGG--TPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEES  173 (186)
T ss_dssp             SCEEEESCCSSCEEEEECCCS---SCCSEEEEEEEETTCC--CCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETTEEC
T ss_pred             CccEEEEeCCCEEEEEEECCC---CcccEEEEEEEeCCCC--CceEEEcCCCcCEEEEcCCCCCCEEEEEEEEEcCCCcC
Confidence            367889999999999998553   5699999999887542  12233456678999999999999999999999988876


Q ss_pred             cceeeEEecC
Q 005110          405 GRCEIWFSTG  414 (714)
Q Consensus       405 g~~E~k~~T~  414 (714)
                      ....+.+.|.
T Consensus       174 ~p~~~~~~T~  183 (186)
T 1qr4_A          174 EPISGILKTA  183 (186)
T ss_dssp             CCEEEEEEC-
T ss_pred             cCEEEEEEec
Confidence            6777777764

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.09  E-value=1.3e-05  Score=69.34  Aligned_cols=82  Identities=21%  Similarity=0.226  Sum_probs=58.2

Q ss_pred             ceEEEEEeeceeEEEEe--CcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          325 NMVKFEDVRATSLTVVL--GSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL--~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ..+++++++++||+|-.  ........ +.||.|.||.....    ....+.  ...+.|.||.|.|.|.|+|.+++..|
T Consensus        14 ~~l~~~~~~~~sv~l~W~~~~P~~~ng-~~~Y~v~y~~~~~~----~~~~~~--~~~~~i~~L~p~t~Y~f~V~A~~~~G   86 (107)
T 1x5a_A           14 LSLKLVKKEPRQLELTWAGSRPRNPGG-NLSYELHVLNQDEE----WHQMVL--EPRVLLTKLQPDTTYIVRVRTLTPLG   86 (107)
T ss_dssp             CCCCEEEEETTEEEEECCCCCSSCCSS-CCEEEEEEECSSCE----EEEEES--SSEEEEESCCSSCEEEEEEEEECSSS
T ss_pred             CceEEEecCCCEEEEEECCCCCCCCCC-ceEEEEEEEeCCCC----ceEEEe--cceEEECCCCCCCEEEEEEEEECCCc
Confidence            46889999999999999  54432223 39999999876111    112222  23399999999999999999999987


Q ss_pred             cCcce--eeEEecC
Q 005110          403 ELGRC--EIWFSTG  414 (714)
Q Consensus       403 elg~~--E~k~~T~  414 (714)
                      . |.+  .+.+.|.
T Consensus        87 ~-g~~S~~~~~~T~   99 (107)
T 1x5a_A           87 P-GPFSPDHEFRTS   99 (107)
T ss_dssp             C-CCCCCCEEEECC
T ss_pred             c-CCCCCCEEEEEC
Confidence            4 433  3455554

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A

Probab=98.06  E-value=2e-05  Score=73.77  Aligned_cols=87  Identities=23%  Similarity=0.293  Sum_probs=67.5

Q ss_pred             CCcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          319 SNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       319 ~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      ..+|++..++..+++++||+|-.....  ...|.||.|.|+........ ....+....+.+.|+||.|.|.|.|+|.++
T Consensus        21 ~~~P~P~~l~~~~~~~~sv~lsW~~p~--~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~   97 (203)
T 2gee_A           21 MEVPQPTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVYTV   97 (203)
T ss_dssp             SCCCCCEEEEEECCTTTCEEEEEECCS--SSSCCEEEEEEEESSSSSCC-EEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred             ccCcCCCccEEEecCCCEEEEEecCCC--CCCccEEEEEEEECCCCCCc-eeEEcCCCccEEEeCCCCCCCEEEEEEEEE
Confidence            457778899999999999999987654  34799999999977553111 122455778999999999999999999999


Q ss_pred             cCCccCccee
Q 005110          399 NGTTELGRCE  408 (714)
Q Consensus       399 ~~~~elg~~E  408 (714)
                      ++.|.-....
T Consensus        98 ~~~g~s~~~~  107 (203)
T 2gee_A           98 KNGGESTPTT  107 (203)
T ss_dssp             SSSCBCCCEE
T ss_pred             eCCCccccEe
Confidence            9876533333

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.04  E-value=1.4e-05  Score=67.92  Aligned_cols=77  Identities=17%  Similarity=0.209  Sum_probs=59.2

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      -.+++.+++.+||+|-+..... -...|.||.|-||..... +..-  .......+.+.|.||.|.|+|.|||.+++..|
T Consensus        12 ~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~--~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G   89 (110)
T 2yuw_A           12 TLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVA--NKDLIDKTKFTITGLPTDAKIFVRVKAVNAAG   89 (110)
T ss_dssp             EEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEEC--CSSCCCSSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred             CccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEe--ccccCccCEEEECCCCCCCEEEEEEEEEcCCc
Confidence            3588999999999999987653 234699999999987543 2110  00123678999999999999999999999987


Q ss_pred             c
Q 005110          403 E  403 (714)
Q Consensus       403 e  403 (714)
                      .
T Consensus        90 ~   90 (110)
T 2yuw_A           90 A   90 (110)
T ss_dssp             E
T ss_pred             C
Confidence            6

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.04  E-value=4.2e-05  Score=65.92  Aligned_cols=72  Identities=11%  Similarity=0.188  Sum_probs=55.8

Q ss_pred             EEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          330 EDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       330 E~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      .+++++||+|-+...... ...|.||.|.+|.....  .+-.-+...+.+.+.|.+|.|.|.|.|||.+++..|.
T Consensus        28 ~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~  100 (120)
T 2crm_A           28 GKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNG--NKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQ  100 (120)
T ss_dssp             EEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSS--CCCEEEECSSCSEEEECSCCTTSCEEEEEEEEETTEE
T ss_pred             eccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCC--cCCEEEEeccccEEEECCCCCCCEEEEEEEEEcCCcc
Confidence            489999999998876533 45699999999987541  1112223456889999999999999999999998774

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}

Probab=98.03  E-value=1.7e-05  Score=68.96  Aligned_cols=80  Identities=23%  Similarity=0.237  Sum_probs=60.6

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      -.+++.+++++||+|.+...... ...|.||.|.||..... +.   .+......+.+.|.||.|.|+|.|||.+.+..|
T Consensus        22 ~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~---~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G   98 (120)
T 2yux_A           22 QIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWF---TVIEHYHRTSATITELVIGNEYYFRVFSENMCG   98 (120)
T ss_dssp             SCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCE---EEESSCCSSCCEECCCCSSEEEEEEECCCSSSC
T ss_pred             CCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceE---EeeecCCcCEEEECCCCCCCEEEEEEEEeeCCc
Confidence            35889999999999999876533 35699999999986543 21   111134678999999999999999999998876


Q ss_pred             cCcce
Q 005110          403 ELGRC  407 (714)
Q Consensus       403 elg~~  407 (714)
                      .=..+
T Consensus        99 ~s~~S  103 (120)
T 2yux_A           99 LSEDA  103 (120)
T ss_dssp             SCSSC
T ss_pred             CCCCc
Confidence            54333

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}

Probab=98.03  E-value=1.7e-05  Score=71.19  Aligned_cols=82  Identities=12%  Similarity=0.117  Sum_probs=64.8

Q ss_pred             eeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCcceeeEE
Q 005110          332 VRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWF  411 (714)
Q Consensus       332 vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg~~E~k~  411 (714)
                      ++++||+|.+.....-..-|.||.+-||..... .-.....+...++.+.|.||.|.|+|.|||++.+..|.--.++..+
T Consensus        19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~-~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~N~~G~s~pS~~~~   97 (114)
T 2kbg_A           19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKE-DQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEF   97 (114)
T ss_dssp             CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCC-SCCEEEEEETTTCCEEECCCCTTCCEEEEEEEECTTSCEEEEEEEE
T ss_pred             cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCC-CcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEEeCCcCcCCcCCEE
Confidence            699999999975433346799999999997432 1112334677889999999999999999999999998777777777


Q ss_pred             ecC
Q 005110          412 STG  414 (714)
Q Consensus       412 ~T~  414 (714)
                      .|.
T Consensus        98 ~T~  100 (114)
T 2kbg_A           98 SMP  100 (114)
T ss_dssp             CCC
T ss_pred             EcC
Confidence            775

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}

Probab=98.02  E-value=6.6e-06  Score=72.25  Aligned_cols=79  Identities=20%  Similarity=0.291  Sum_probs=56.8

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCC-cceEEEEeeecCCC-CCCCCc-eeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGN-IISYTLWHRRAHEG-FPARPT-CTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~-i~Gy~LWhrks~~~-y~~ept-~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      +..++++.++.+ |+|-++........ |.||.|.||..... ....-. .......+.++|+||.|.|+|.|||.+++.
T Consensus        11 P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~   89 (122)
T 2e3v_A           11 PSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNG   89 (122)
T ss_dssp             CEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEEEEEEeC
Confidence            346778888888 88888766544344 99999999987643 210000 011246789999999999999999999999


Q ss_pred             Ccc
Q 005110          401 TTE  403 (714)
Q Consensus       401 ~~e  403 (714)
                      .|.
T Consensus        90 ~G~   92 (122)
T 2e3v_A           90 KGL   92 (122)
T ss_dssp             TEE
T ss_pred             Ccc
Confidence            874

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.02  E-value=1.2e-05  Score=69.58  Aligned_cols=70  Identities=20%  Similarity=0.093  Sum_probs=54.6

Q ss_pred             EeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          331 DVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       331 ~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      .++++||+|-+.........|.||.|-||.....   +-.-+.....+.+.|.||.|.|.|.|||.+++..|.
T Consensus        21 ~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~   90 (110)
T 2db8_A           21 CTHNNSATLSWKQPPLSTVPADGYILELDDGNGG---QFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGV   90 (110)
T ss_dssp             SCSSSEEEECCBCCTTCCSCCSEEEEEECCSSSS---CCEEEEEESCSCEEEECCCSSSCCEEEEEEECSSCB
T ss_pred             ccCCCEEEEEECCCCCCCCCccEEEEEEEeCCCC---ceEEEEeCCcCEEEECCCCCCCEEEEEEEEEeCCcC
Confidence            4688999998887764446799999999876432   122233347889999999999999999999999873

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.02  E-value=1e-05  Score=69.31  Aligned_cols=75  Identities=19%  Similarity=0.297  Sum_probs=57.8

Q ss_pred             EEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          328 KFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       328 rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      ++.+++++||+|-+.........|.||.|.|+.....+..- ...+....+.+.|.||.|.|.|.|||.+++..|.
T Consensus        27 ~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~  101 (121)
T 1wf5_A           27 TLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVL-LASVDPKATSVTVKGLVPARSYQFRLCAVNDVGK  101 (121)
T ss_dssp             EECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCEEE-ESSCCTTCCEEEEESCCTTCEEEEEEEEEESSCE
T ss_pred             eeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCCCCceEe-EcccCCCccEEEECCcCCCCEEEEEEEEEcCCcc
Confidence            78899999999999866434457999999999875322100 0123456789999999999999999999998775

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.02  E-value=4.7e-05  Score=67.53  Aligned_cols=86  Identities=20%  Similarity=0.137  Sum_probs=61.3

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecC------CCCCC--CCceeeecCCceeEeecCCcceeeeEEEEe
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAH------EGFPA--RPTCTLFAPNTRFVVTGLCPATEYQFKVVS  397 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~------~~y~~--ept~~~~~p~~r~~vs~L~P~TEY~fkvvs  397 (714)
                      .++..+++.+||+|.+.....  ++|.+|.|-|+.-.      +.+..  .-..+-..+.+++.|.||.|.|+|.|||.+
T Consensus        22 ~~~~~~~~~~sv~L~W~~p~~--~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~gL~p~t~Y~frV~A   99 (127)
T 2dmk_A           22 REELCTASHDTITVHWISDDE--FSISSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKA   99 (127)
T ss_dssp             EEEEEEEETTEEEEEEECSCC--SSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEEECSSEEEEESCCSSCEEEEEEEE
T ss_pred             CCEEEeeeCCEEEEEECCCCC--CCccceEEEEEEecccccccccccCCCCcEEeecccCCeEEECCCCCCCEEEEEEEE
Confidence            578899999999999987653  33888888887511      00100  111111246889999999999999999999


Q ss_pred             ccCCccCcce-eeEEecC
Q 005110          398 SNGTTELGRC-EIWFSTG  414 (714)
Q Consensus       398 F~~~~elg~~-E~k~~T~  414 (714)
                      .+..|. +.+ ++.+.|.
T Consensus       100 ~N~~G~-~~S~~v~~~T~  116 (127)
T 2dmk_A          100 INQAGS-RNSEPTRLKTN  116 (127)
T ss_dssp             EESSCE-EECCCEEEECC
T ss_pred             EeCCCC-CCCcCeEeEeC
Confidence            999998 533 5666665

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A

Probab=98.02  E-value=9.8e-06  Score=70.92  Aligned_cols=83  Identities=18%  Similarity=0.170  Sum_probs=66.4

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  404 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  404 (714)
                      .+++.+|+++|+.|-+....   ..|.||+|-|+.+...  .+| ...+...++.+.|+||.|+|+|.+.|.++.+.++-
T Consensus        11 ~l~vt~vt~~S~~lsW~~p~---~~v~~Y~I~y~~~~g~--~~~~~~~v~g~~~s~~l~~L~PgT~Y~V~v~a~~~~~~S   85 (95)
T 2h41_A           11 SESVTEITASSFVVSWVSAS---DTVSGFRVEYELSEEG--DEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQ   85 (95)
T ss_dssp             TTSCCCCGGGCEEEECCCSC---TTEEEEEEEEEETTTC--CCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCE
T ss_pred             EEEEEEeCCCeEEEEECCCC---CCccEEEEEEEeCCCC--CcceEEECCCCccEEEECCCCCCCEEEEEEEEEcCCCcc
Confidence            46778999999999887653   6799999999887653  233 34678889999999999999999999999987776


Q ss_pred             cceeeEEec
Q 005110          405 GRCEIWFST  413 (714)
Q Consensus       405 g~~E~k~~T  413 (714)
                      +...+...|
T Consensus        86 ~p~s~~~~T   94 (95)
T 2h41_A           86 SLILSTSQT   94 (95)
T ss_dssp             EEEEEEEEE
T ss_pred             cCEEEEEEC
Confidence            655555444

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}

Probab=98.01  E-value=1.7e-05  Score=73.32  Aligned_cols=86  Identities=19%  Similarity=0.212  Sum_probs=65.5

Q ss_pred             ceEEEEEee--ceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          325 NMVKFEDVR--ATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       325 ~~~rFE~vt--~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      -.+++.+|+  ++||+|-....  ....|.||.|.||.....  .+. ...+....+.+.|.||.|.|+|.|+|.+++..
T Consensus         4 ~~l~v~~v~~~~~si~l~W~~p--~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~   79 (201)
T 2ha1_A            4 VEVFITETPSQPNSHPIQWNAP--QPSHISKYILRWRPKNSV--GRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQY   79 (201)
T ss_dssp             CEEECCSCSCCSSCEEEEEECC--SSTTCCEEEEEEEETTCS--SCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECTT
T ss_pred             eeEEEEecCCCCCEEEEEEeCC--CCCCceEEEEEEEECCCC--CceEEEecCCCccEEEecCCCCCCEEEEEEEEEecc
Confidence            467888888  99999998865  346899999988865432  112 22345568899999999999999999999988


Q ss_pred             ccCcceeeEEecC
Q 005110          402 TELGRCEIWFSTG  414 (714)
Q Consensus       402 ~elg~~E~k~~T~  414 (714)
                      |.-......+.|.
T Consensus        80 G~~~~~~~~~~t~   92 (201)
T 2ha1_A           80 GHQEVTRFDFTTT   92 (201)
T ss_dssp             SCEEEEEEEEEEC
T ss_pred             cccCceeEEEecC
Confidence            7665556666664

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.01  E-value=2.6e-05  Score=68.55  Aligned_cols=84  Identities=12%  Similarity=0.136  Sum_probs=62.1

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ..++.+. +++||.|-++....  ....|.||+|+||.....   +. -++....+.+.+. |.|.|.|.|+|.+||..|
T Consensus        23 ~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~---~~-~~~~~~~~~~~~~-L~~~t~Y~~~V~A~n~~G   96 (117)
T 1wj3_A           23 GNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQN---NV-QVLNTNKTSAELV-LPIKEDYIIEVKATTDGG   96 (117)
T ss_dssp             CSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCS---SC-EEEEESSSEEEEE-CCCSSCEEEEEEEEESSC
T ss_pred             ccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCC---CC-eEEeCCCcEEEEE-CCCCCEEEEEEEEECCCc
Confidence            3456665 88999999988743  457899999999987653   11 2444455667777 999999999999999988


Q ss_pred             cCcce-eeEEecC
Q 005110          403 ELGRC-EIWFSTG  414 (714)
Q Consensus       403 elg~~-E~k~~T~  414 (714)
                      +=-.+ .+.+.|.
T Consensus        97 ~Gp~S~~v~~~T~  109 (117)
T 1wj3_A           97 DGTSSEQIRIPRI  109 (117)
T ss_dssp             CCCBCCCEEECCC
T ss_pred             cCCCCCCEEEEcC
Confidence            64344 5666664

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.99  E-value=2.1e-05  Score=66.98  Aligned_cols=85  Identities=15%  Similarity=0.163  Sum_probs=61.6

Q ss_pred             eEEE-EEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          326 MVKF-EDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rF-E~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      .+++ ..++++||+|-.+.... ....|.||.|.||.....   +-.-+.....+.+.|.||.|.|.|.|||.+++..|.
T Consensus        14 ~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~   90 (110)
T 2crz_A           14 PPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKD---EPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGF   90 (110)
T ss_dssp             CCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSC---CCEEEEEESCSEEEEESCCTTCEEEECCEEECSSCB
T ss_pred             CceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCC---ceEEEEeCCcEEEEECCcCCCCEEEEEEEEEcCCcc
Confidence            3455 67899999999975543 346699999999976443   222233557889999999999999999999999886


Q ss_pred             Cccee-eEEec
Q 005110          404 LGRCE-IWFST  413 (714)
Q Consensus       404 lg~~E-~k~~T  413 (714)
                      =..++ +.+.|
T Consensus        91 g~~S~~~~~~T  101 (110)
T 2crz_A           91 GPFSEKCDITT  101 (110)
T ss_dssp             CCCCCCEEEEC
T ss_pred             CCCCCcccccc
Confidence            33333 34444

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A

Probab=97.98  E-value=3.5e-05  Score=76.82  Aligned_cols=91  Identities=12%  Similarity=0.096  Sum_probs=68.2

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      |.+..+....+++++|+|-+.........|.||.|+||..... +..  ...+....+.+.|.+|.|.|.|.|||.+++.
T Consensus       294 p~~p~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~  371 (389)
T 2jll_A          294 PSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWL--EKKVQGNKDHIILEHLQWTMGYEVQITAANR  371 (389)
T ss_dssp             CCCCCEEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCB--CCEECTTCCEEEECSCCTTCEEEEEEEEEC-
T ss_pred             CCCCccccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCccee--EeeccCCcceEEeCCcCCCCEEEEEEEEEcC
Confidence            4444677788999999999986544456799999999986543 321  2245667788999999999999999999999


Q ss_pred             CccCcceeeEEecC
Q 005110          401 TTELGRCEIWFSTG  414 (714)
Q Consensus       401 ~~elg~~E~k~~T~  414 (714)
                      .|.=..++..+.|.
T Consensus       372 ~G~s~~s~~~~~T~  385 (389)
T 2jll_A          372 LGYSEPTVYEFSMP  385 (389)
T ss_dssp             CCBCCCEEEEEECC
T ss_pred             CcCCCceeeEecCC
Confidence            99766778877775

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1

Probab=97.95  E-value=3.8e-05  Score=70.00  Aligned_cols=86  Identities=21%  Similarity=0.224  Sum_probs=64.7

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++.+++++||+|-.+...   +.|.||.|.|+.....   .....+....+.+.|.||.|.|+|.|+|.++++.+
T Consensus         9 ~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~~   82 (186)
T 1qr4_A            9 NPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPSGK---KNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGRH   82 (186)
T ss_dssp             CCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECTTCC---EEEEEECTTCSEEEEESCCSSCEEEEEEEEESSSC
T ss_pred             CCCceEEEecCCCEEEEEEeCCC---CCccEEEEEEEeCCCC---eeEEECCCCCCEEEECCCCCCCEEEEEEEEEcCCc
Confidence            45578899999999999987653   4789999999854321   11223445678999999999999999999999766


Q ss_pred             cCcceeeEEecC
Q 005110          403 ELGRCEIWFSTG  414 (714)
Q Consensus       403 elg~~E~k~~T~  414 (714)
                      .-....+.+.|.
T Consensus        83 ~s~~~~~~~~t~   94 (186)
T 1qr4_A           83 KSKPTTIKGSTV   94 (186)
T ss_dssp             BCCCEEEEEECC
T ss_pred             cCCCEEEEEECC
Confidence            555556666663

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A

Probab=97.94  E-value=3.9e-05  Score=71.26  Aligned_cols=92  Identities=16%  Similarity=0.194  Sum_probs=67.1

Q ss_pred             cCceEEEEEe--eceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          323 VPNMVKFEDV--RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       323 ~~~~~rFE~v--t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      ++..+++..+  ++++|+|-..........|.||.|.|+..... ...--...+....+.+.|.||.|.|.|.|+|.+++
T Consensus       108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n  187 (211)
T 3p4l_A          108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARN  187 (211)
T ss_dssp             CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEEEEESSCSEEEECCCCTTCEEEEEEEEEE
T ss_pred             CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEEEecCCeeEEEEcCCCCCCEEEEEEEEEc
Confidence            3446778877  68999999987654446799999999977554 21112234667788999999999999999999999


Q ss_pred             CCccCccee-eEEecC
Q 005110          400 GTTELGRCE-IWFSTG  414 (714)
Q Consensus       400 ~~~elg~~E-~k~~T~  414 (714)
                      ..|+=-.++ +.+.|.
T Consensus       188 ~~G~g~~S~~v~~~~~  203 (211)
T 3p4l_A          188 SKGMGPMSEAVQFRTP  203 (211)
T ss_dssp             TTEECCCCCCEEEECC
T ss_pred             CCccCCCCCCEEccCc
Confidence            988533343 444443

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A

Probab=97.91  E-value=6.2e-05  Score=69.93  Aligned_cols=90  Identities=19%  Similarity=0.197  Sum_probs=65.9

Q ss_pred             cCceEEEEEeeceeEEEEeCcCC-C---CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          323 VPNMVKFEDVRATSLTVVLGSED-P---SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~-~---s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      ++-.+++..++++||+|-..... +   ....|.||.|.||.....  ..-..++....+.+.|+||.|.|+|.|+|.++
T Consensus         7 ~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~   84 (211)
T 3p4l_A            7 PPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPA--NTKYKNANATTLSYLVTGLKPNTLYEFSVMVT   84 (211)
T ss_dssp             CCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC-----CCCEEEEESSSEEEECSCCTTCEEEEEEEEE
T ss_pred             CCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCC--cceEEEeCCCceEEEecCcCCCCEEEEEEEEE
Confidence            44578899999999999998653 1   246799999999986543  11223456678899999999999999999999


Q ss_pred             cCCccCccee-eEEecC
Q 005110          399 NGTTELGRCE-IWFSTG  414 (714)
Q Consensus       399 ~~~~elg~~E-~k~~T~  414 (714)
                      +..|.-..++ +.+.|.
T Consensus        85 n~~g~~~~S~~~~~~t~  101 (211)
T 3p4l_A           85 KGRRSSTWSMTAHGTTF  101 (211)
T ss_dssp             ETTEECCCCCCEEEECC
T ss_pred             cCCCCCccceeEeeecc
Confidence            9877433232 455554

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A

Probab=97.91  E-value=1.9e-05  Score=73.10  Aligned_cols=89  Identities=18%  Similarity=0.181  Sum_probs=65.1

Q ss_pred             cCceEEEEEeeceeEEEEeCcCC-CCCCCcceEEEEeeecCCCCCCCCceeeec--CCceeEeecCCcceeeeEEEEecc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSED-PSPGNIISYTLWHRRAHEGFPARPTCTLFA--PNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~y~~ept~~~~~--p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      ++..+++..++++||+|-..... .....|.||.|.||.....  .+...+...  ..+.+.|+||.|.|.|.|||.+++
T Consensus       118 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n  195 (214)
T 2ibg_A          118 VPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSA--GEYFKATIEGAHARSFKIAPLETATMYEFKLQSFS  195 (214)
T ss_dssp             CCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCC--SCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEEC
T ss_pred             CCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCC--cceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEc
Confidence            45567888999999999998775 3457799999999987652  122222222  368999999999999999999999


Q ss_pred             CCccCcce-eeEEec
Q 005110          400 GTTELGRC-EIWFST  413 (714)
Q Consensus       400 ~~~elg~~-E~k~~T  413 (714)
                      ..|.=..+ .+.+.|
T Consensus       196 ~~G~g~~S~~~~~~T  210 (214)
T 2ibg_A          196 AASASEFSALKQGRT  210 (214)
T ss_dssp             SSCBCCCCCCEEEEC
T ss_pred             CCccCCCcceEeeEe
Confidence            98753223 344444

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.89  E-value=1.1e-05  Score=71.60  Aligned_cols=79  Identities=18%  Similarity=0.273  Sum_probs=57.9

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++.+ +.+||+|-..-...-...|+||.|-||+...... .-.-.+....+++.|.||.|.|+|.|||++++..|
T Consensus        10 pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~~~~W~-~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~A~n~~G   87 (108)
T 1v5j_A           10 PPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWE-VLDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSF   87 (108)
T ss_dssp             CCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCE-EEEEEECSSCCEEECCCCCTTSCEECCBEEEETTE
T ss_pred             CCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeCCCCcE-EeeeecCCCcCEEEeCCCCCCCEEEEEEEEEcCCC
Confidence            444567765 5788888887765444669999999998432221 11113456789999999999999999999999876


Q ss_pred             c
Q 005110          403 E  403 (714)
Q Consensus       403 e  403 (714)
                      .
T Consensus        88 ~   88 (108)
T 1v5j_A           88 V   88 (108)
T ss_dssp             E
T ss_pred             C
Confidence            5

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A

Probab=97.87  E-value=6.6e-05  Score=72.95  Aligned_cols=91  Identities=21%  Similarity=0.212  Sum_probs=70.8

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          320 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       320 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      .++++..+++.+++++||+|-.+..+   ..|.||.|.||.....- ..-...+....+.+.|+||.|.|+|.|+|.+++
T Consensus        20 ~p~~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~   95 (290)
T 3r8q_A           20 AIPAPTDLKFTQVTPTSLSAQWTPPN---VQLTGYRVRVTPKEKTG-PMKEINLAPDSSSVVVSGLMVATKYEVSVYALK   95 (290)
T ss_dssp             CCCCCEEEEEEEECSSCEEEEEECCS---SCCCEEEEEEEESSSSS-CCEEEEECTTCCEEEECSCCSSCEEEEEEEEEE
T ss_pred             CCCCCCceEEEECCCCEEEEEEeCCC---CCeeEEEEEEEeCCCCC-ceEEEEcCCCccEEEeCCCCCCCEEEEEEEEEe
Confidence            34566789999999999999998763   47999999999875431 111223455688999999999999999999999


Q ss_pred             CCccCcceeeEEecC
Q 005110          400 GTTELGRCEIWFSTG  414 (714)
Q Consensus       400 ~~~elg~~E~k~~T~  414 (714)
                      +.|.-..++..+.|.
T Consensus        96 ~~g~s~~s~~~~~t~  110 (290)
T 3r8q_A           96 DTLTSRPAQGVVTTL  110 (290)
T ss_dssp             TTEECCCEEEEEECC
T ss_pred             CCCCCCCcceeEecC
Confidence            888766666666664

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A

Probab=97.86  E-value=2.7e-05  Score=76.71  Aligned_cols=89  Identities=17%  Similarity=0.177  Sum_probs=61.6

Q ss_pred             ceEEEEEe--eceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          325 NMVKFEDV--RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       325 ~~~rFE~v--t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      ..++++.+  ++++|+|-..........|.||.|.||..... +..-..-......+.+.|.||.|.|+|.|||.+++..
T Consensus       204 ~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~  283 (303)
T 1i1r_A          204 HNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKED  283 (303)
T ss_dssp             EEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETT
T ss_pred             cceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCC
Confidence            34566655  88999999887654345699999999988643 3211100013467899999999999999999999976


Q ss_pred             c--cCcce--eeEEec
Q 005110          402 T--ELGRC--EIWFST  413 (714)
Q Consensus       402 ~--elg~~--E~k~~T  413 (714)
                      |  .++.|  ++.+.|
T Consensus       284 G~G~~S~wS~~~~~~T  299 (303)
T 1i1r_A          284 GKGYWSDWSEEASGIT  299 (303)
T ss_dssp             SCSCCCCCCCCEEEEC
T ss_pred             CCCCcCCCCCccceeC
Confidence            5  33332  445555

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A

Probab=97.86  E-value=5.4e-05  Score=71.98  Aligned_cols=89  Identities=13%  Similarity=0.094  Sum_probs=67.3

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      +.++-.++...++++||+|-.+..   ...|.||.|.||.....  ......+....+.+.|+||.|.|+|.|+|.+++.
T Consensus         6 ~~~P~~l~~~~~~~~si~l~W~~p---~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   80 (234)
T 3f7q_A            6 LGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDS--ESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGA   80 (234)
T ss_dssp             CCCCEEEEEEECSSSCEEEEEECC---SSCCCEEEEEEEETTSC--GGGCEEEEESSSEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCcceEEEEcCCCEEEEEEECC---CCccceEEEEEEECCCC--ccceEEEcCCccEEEECCCCCCCEEEEEEEEEeC
Confidence            345567899999999999998875   35899999999987543  1223355678899999999999999999999998


Q ss_pred             CccCcce-eeEEecC
Q 005110          401 TTELGRC-EIWFSTG  414 (714)
Q Consensus       401 ~~elg~~-E~k~~T~  414 (714)
                      .|.=-.+ .+.+.|.
T Consensus        81 ~G~g~~s~~~~~~T~   95 (234)
T 3f7q_A           81 QGEGPYSSLVSCRTH   95 (234)
T ss_dssp             TEECCCCCCEEEECC
T ss_pred             CCcCCCCCeEEEEcC
Confidence            7632233 3444443

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1

Probab=97.83  E-value=9.1e-05  Score=61.07  Aligned_cols=72  Identities=15%  Similarity=0.291  Sum_probs=55.8

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +..++...++++||+|-+..... ..+|.||.|. |..        ..+...+.+.+.+++|.|.|.|.|+|.+++..|.
T Consensus         7 P~~l~~~~~~~~sv~L~W~~~~~-~~~i~~Y~v~-~~~--------~~~~~~~~~~~~~~~L~~~t~Y~~~V~A~n~~G~   76 (88)
T 1k85_A            7 PTNLASTAQTTSSITLSWTASTD-NVGVTGYDVY-NGT--------ALATTVTGTTATISGLAADTSYTFTVKAKDAAGN   76 (88)
T ss_dssp             CEEEEEEEECSSCEEEEEECCSC-CSSEEEEEEE-ESS--------SEEEEESSSEEEECCCCSSCEEEEEEEEEETTTE
T ss_pred             CCccEEEeccCCEEEEEECCCCC-CCCccEEEEE-ECC--------EEEeecCCCEEEeCCCCCCCEEEEEEEEEeCCCC
Confidence            34688899999999999976542 2359999997 421        1233446789999999999999999999998876


Q ss_pred             Cc
Q 005110          404 LG  405 (714)
Q Consensus       404 lg  405 (714)
                      -|
T Consensus        77 ~s   78 (88)
T 1k85_A           77 VS   78 (88)
T ss_dssp             EC
T ss_pred             cC
Confidence            44

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}

Probab=97.83  E-value=0.0001  Score=66.44  Aligned_cols=78  Identities=19%  Similarity=0.272  Sum_probs=62.3

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCC-CCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSP-GNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~-~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      ++..+++..+++++|+|-........ ..|.||.|.|+.....   +-..+.....+.+.|.+|.|.|.|.|+|.+++..
T Consensus       105 ~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~  181 (197)
T 3lpw_A          105 PPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSD---KWATCATVKVTEATITGLIQGEEYSFRVSAQNEK  181 (197)
T ss_dssp             CCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCS---CCEEEEEESSSEEEECCCCTTCEEEEEEEEEETT
T ss_pred             CCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCC---ceEEeecccccEEEeCCcCCCCEEEEEEEEEeCC
Confidence            33468889999999999998865433 4799999999987543   2233455678999999999999999999999987


Q ss_pred             cc
Q 005110          402 TE  403 (714)
Q Consensus       402 ~e  403 (714)
                      |.
T Consensus       182 G~  183 (197)
T 3lpw_A          182 GI  183 (197)
T ss_dssp             EE
T ss_pred             cc
Confidence            74

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1

Probab=97.83  E-value=5.9e-05  Score=69.78  Aligned_cols=89  Identities=16%  Similarity=0.232  Sum_probs=63.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC--CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG--FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~--y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      ++..+++.+ +++||+|-..........|.||.|.||.....  +. .-...+....+.+.+ ||.|.|+|.|||.+++.
T Consensus         8 ~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~-~~~~~~~~~~~~~~~-~L~p~t~Y~~~V~A~n~   84 (205)
T 1cfb_A            8 APKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWD-AAYEKVPNTDSSFVV-QMSPWANYTFRVIAFNK   84 (205)
T ss_dssp             CCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCE-EEEEEEETTCSEEEE-ECCSSEEEEEEEEEEET
T ss_pred             CCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCce-eeeeccCCCceEEEE-eCCCCCEEEEEEEEEEC
Confidence            334688888 99999999886643456799999999876432  21 111233445667776 99999999999999999


Q ss_pred             CccCccee--eEEecC
Q 005110          401 TTELGRCE--IWFSTG  414 (714)
Q Consensus       401 ~~elg~~E--~k~~T~  414 (714)
                      .|.-..++  +.+.|.
T Consensus        85 ~G~~~~s~~~~~~~T~  100 (205)
T 1cfb_A           85 IGASPPSAHSDSCTTQ  100 (205)
T ss_dssp             TEECCCCCCCCCEEEC
T ss_pred             CccCCCCCCceeEEcC
Confidence            87654442  555554

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A

Probab=97.82  E-value=9.7e-05  Score=70.24  Aligned_cols=84  Identities=18%  Similarity=0.254  Sum_probs=62.6

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCce-e-e-ecCCceeEeecCCcceeeeEEEEeccC
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTC-T-L-FAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~-~-~-~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      ..+++..+++++|+|-+.........|.||.|.|+..... ....+.. + + ....+.+.|.||.|.|.|.|+|.+++.
T Consensus       103 ~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~  182 (234)
T 3f7q_A          103 GRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNG  182 (234)
T ss_dssp             CCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSSCCEECCCSCTTCCEEEEECCCTTCCEEEEEEEEET
T ss_pred             CccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccCcceEEEecCCcceEEEeCCCCCCCeEEEEEEEECC
Confidence            4588899999999999987654456799999999986554 2111111 1 1 233578999999999999999999999


Q ss_pred             CccCccee
Q 005110          401 TTELGRCE  408 (714)
Q Consensus       401 ~~elg~~E  408 (714)
                      .|.=-.++
T Consensus       183 ~G~g~~S~  190 (234)
T 3f7q_A          183 AGWGPERE  190 (234)
T ss_dssp             TEECCCEE
T ss_pred             CccCCCcC
Confidence            88633444

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}

Probab=97.82  E-value=3.1e-05  Score=71.64  Aligned_cols=77  Identities=17%  Similarity=0.166  Sum_probs=59.0

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  405 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  405 (714)
                      .+++.+++++||+|-....   ...|.||.|.|+.....- ..-...+....+.+.|.||.|.|+|.|+|.++++.|+=.
T Consensus       117 ~l~~~~~~~~sv~l~W~~p---~~~i~~Y~v~~~~~~~~~-~~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~  192 (201)
T 2ha1_A          117 SESVTEITASSFVVSWVSA---SDTVSGFRVEYELSEEGD-EPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQS  192 (201)
T ss_dssp             CSSCCCCCSCCEEEECCCS---CTTEEEEEEEEEETTTCC-CCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred             ceEEEecCCCeEEEEEeCC---CCCccEEEEEEEECCCCC-ceeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcc
Confidence            3577889999999988765   347999999999754321 111234566678999999999999999999999987533


Q ss_pred             c
Q 005110          406 R  406 (714)
Q Consensus       406 ~  406 (714)
                      .
T Consensus       193 ~  193 (201)
T 2ha1_A          193 L  193 (201)
T ss_dssp             E
T ss_pred             c
Confidence            3

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A

Probab=97.82  E-value=3.1e-05  Score=74.80  Aligned_cols=75  Identities=15%  Similarity=0.212  Sum_probs=61.8

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ..+++..++++||+|-.....+  ....|.||+|.|+.....   .-...+....+.+.|.||.|.|+|.|+|.+++..|
T Consensus       201 p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G  277 (290)
T 3l5i_A          201 PTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN---ETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG  277 (290)
T ss_dssp             CCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSC---CEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred             CeeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCC---eEEEEeCCCceEEEeCCCCCCCEEEEEEEEEeCCC
Confidence            3678899999999999985432  356799999999987553   22345677888999999999999999999999998

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1

Probab=97.81  E-value=7.7e-05  Score=71.82  Aligned_cols=86  Identities=17%  Similarity=0.205  Sum_probs=67.3

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      +++..+++..++++||+|-++..   ...|.||.|.|+.....   .....+....+.+.|.||.|.|.|.|+|.++++.
T Consensus       198 ~~P~~l~~~~~~~~sv~l~W~~p---~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~  271 (283)
T 1tdq_A          198 DSPRDLMVTASSETSISLIWTKA---SGPIDHYRITFTPSSGI---SSEVTVPRDRTSYTLTDLEPGAEYIISITAERGR  271 (283)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECC---CSCCSEEEEEEECSSSC---CEEEEEESSCSEEEECCCCTTCCEEEEEEEEETT
T ss_pred             CCCCccEEeEecCCEEEEEEeCC---CCcccEEEEEEEcCCCC---eeEEEeCCCccEEEECCCCCCCEEEEEEEEEcCC
Confidence            34567899999999999999764   25699999999987542   1233456778899999999999999999999988


Q ss_pred             ccCcceeeEEec
Q 005110          402 TELGRCEIWFST  413 (714)
Q Consensus       402 ~elg~~E~k~~T  413 (714)
                      |+=..+.++.+|
T Consensus       272 g~s~~~~~~a~T  283 (283)
T 1tdq_A          272 QQSLESTVDAFT  283 (283)
T ss_dssp             EECCCEEEEEC-
T ss_pred             CCCcceeeEecC
Confidence            876666665554

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A

Probab=97.80  E-value=4.1e-05  Score=70.89  Aligned_cols=86  Identities=12%  Similarity=0.151  Sum_probs=61.6

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCC-C-CCC-CCcee--------eecCCceeEeecCCcceee
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHE-G-FPA-RPTCT--------LFAPNTRFVVTGLCPATEY  391 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~-~-y~~-ept~~--------~~~p~~r~~vs~L~P~TEY  391 (714)
                      ++..+++.+++++||+|-.+........|.||.|.||.... . +.. .....        .....+.+.|++|.|.|.|
T Consensus         4 pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y   83 (214)
T 2ibg_A            4 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTY   83 (214)
T ss_dssp             CCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEE
T ss_pred             CCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEE
Confidence            44456778899999999998776544679999999998643 1 211 11100        1135678899999999999


Q ss_pred             eEEEEeccCCccCccee
Q 005110          392 QFKVVSSNGTTELGRCE  408 (714)
Q Consensus       392 ~fkvvsF~~~~elg~~E  408 (714)
                      .|||.+++..|.-+.++
T Consensus        84 ~~~V~A~n~~g~~~~s~  100 (214)
T 2ibg_A           84 RFRILAVYSNNDNKESN  100 (214)
T ss_dssp             EEEEEEEETTSCEEECC
T ss_pred             EEEEEEEecCCCCCCCC
Confidence            99999999877654443

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}

Probab=97.79  E-value=5.5e-05  Score=76.74  Aligned_cols=83  Identities=16%  Similarity=0.194  Sum_probs=67.5

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      .++.-++-.+||++||++-++.... ..+|.||+|.+--..       ...+....+.|.+.||.|-|+|.|||+++...
T Consensus       152 ~Pp~NL~At~VT~tSVtLsW~aP~~-~~GI~gY~ly~~g~~-------v~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~~  223 (238)
T 2w1n_A          152 NPVRDFKASEINKKNVTVTWTEPET-TEGLEGYILYKDGKK-------VAEIGKDETSYTFKKLNRHTIYNFKIAAKYSN  223 (238)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCSC-CTTEEEEEEEETTEE-------EEEEETTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCCceEEEEccCCeEEEEecCCCC-CCCceeEEEEeCCce-------eEEeeccceEEEecCCCCCCEEEEEEEEEeCC
Confidence            5667899999999999999887643 334999999886532       23578888999999999999999999999999


Q ss_pred             ccCcceeeEEe
Q 005110          402 TELGRCEIWFS  412 (714)
Q Consensus       402 ~elg~~E~k~~  412 (714)
                      |.....|.-..
T Consensus       224 G~~Ss~e~vtV  234 (238)
T 2w1n_A          224 GEVSSKESLTL  234 (238)
T ss_dssp             SCBCCCEEEEE
T ss_pred             CCccccCcEEE
Confidence            98776665443

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1

Probab=97.76  E-value=0.00012  Score=70.49  Aligned_cols=88  Identities=20%  Similarity=0.204  Sum_probs=66.6

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      +.++..+++.+++++||+|-+....   ..|.||.|.||..... ..  -...+....+.+.|+||.|.|+|.|+|.+++
T Consensus        15 p~~P~~l~~~~~~~~sv~l~W~~~~---~~~~~Y~v~~~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~   89 (283)
T 1tdq_A           15 IDGPTQILVRDVSDTVAFVEWTPPR---AKVDFILLKYGLVGGEGGK--TTFRLQPPLSQYSVQALRPGSRYEVSISAVR   89 (283)
T ss_dssp             SCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEESSSSCCC--EEEEECTTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCCCcEEEEEecCCCeEEEEEECCC---CceeEEEEEEEEecCCCCc--EEEEeCCCCCEEEecCCCCCCEEEEEEEEEC
Confidence            4456679999999999999988765   6799999999865433 11  1223456788999999999999999999999


Q ss_pred             CCccCcceeeEEec
Q 005110          400 GTTELGRCEIWFST  413 (714)
Q Consensus       400 ~~~elg~~E~k~~T  413 (714)
                      +.|+-......+.|
T Consensus        90 ~~g~s~~~~~~~~t  103 (283)
T 1tdq_A           90 GTNESDASSTQFTT  103 (283)
T ss_dssp             TTEECCCEEEEEEC
T ss_pred             CCCCCCCeeEEEEC
Confidence            87664344444444

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1

Probab=97.76  E-value=5.2e-05  Score=70.14  Aligned_cols=86  Identities=15%  Similarity=0.093  Sum_probs=63.9

Q ss_pred             ceEEEEEeeceeEEEEeCcCC--CCCCCcceEEEEeeecCCCCCCCCceeeec--CCceeEeecCCcceeeeEEEEeccC
Q 005110          325 NMVKFEDVRATSLTVVLGSED--PSPGNIISYTLWHRRAHEGFPARPTCTLFA--PNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~--~s~~~i~Gy~LWhrks~~~y~~ept~~~~~--p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      ..++...+++++|+|-.....  .....|.||.|.||.....  .+...+...  ..+.+.|+||.|.|.|.|||.+++.
T Consensus       109 ~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~  186 (205)
T 1cfb_A          109 DNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPA--AAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAIND  186 (205)
T ss_dssp             SCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTT--CCCEEEEECCTTCCEEEECSCCSSCEEEEEEEEEET
T ss_pred             eeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCC--CCcEEEEecCCCccEEEEcCCCCCcEEEEEEEEEcC
Confidence            457888999999999998776  2345699999999987653  222222222  4789999999999999999999999


Q ss_pred             CccCcc--e-eeEEec
Q 005110          401 TTELGR--C-EIWFST  413 (714)
Q Consensus       401 ~~elg~--~-E~k~~T  413 (714)
                      .|. |.  + .+.++|
T Consensus       187 ~G~-g~~ss~~v~~~T  201 (205)
T 1cfb_A          187 RGE-SNVAAEEVVGYS  201 (205)
T ss_dssp             TEE-CSSCCCCEEEES
T ss_pred             CCc-CCCCCCcEEEec
Confidence            874 43  2 445555

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A

Probab=97.76  E-value=4.1e-05  Score=71.14  Aligned_cols=78  Identities=17%  Similarity=0.241  Sum_probs=57.2

Q ss_pred             ceEEEEEe--eceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          325 NMVKFEDV--RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       325 ~~~rFE~v--t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      ..+++..+  +++||+|-.+........|.||.|.||..... +..-....+....+.+.|.||.|.|+|.|||.+++..
T Consensus       108 ~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~  187 (215)
T 1bqu_A          108 HNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKED  187 (215)
T ss_dssp             EEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETT
T ss_pred             CceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccccccCccceEEeCCCCCCCEEEEEEEEccCC
Confidence            34566655  88999999876654345699999999988643 3221111124567899999999999999999999876


Q ss_pred             c
Q 005110          402 T  402 (714)
Q Consensus       402 ~  402 (714)
                      |
T Consensus       188 g  188 (215)
T 1bqu_A          188 G  188 (215)
T ss_dssp             S
T ss_pred             C
Confidence            5

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.76  E-value=8.9e-05  Score=68.91  Aligned_cols=87  Identities=16%  Similarity=0.213  Sum_probs=60.5

Q ss_pred             eEEEEEeeceeEEEEeCcCCCC-CC------C--cceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEE
Q 005110          326 MVKFEDVRATSLTVVLGSEDPS-PG------N--IISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVV  396 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s-~~------~--i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvv  396 (714)
                      ..++.+|+++||+|-+...... ..      .  |.+|.|-|+.....  ..-..++....++..|.||.|.|+|.|||.
T Consensus        23 ~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~--~~~~~~~~g~~ts~~v~~L~P~T~Y~~rV~  100 (137)
T 1wk0_A           23 KPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKD--GKYKSVYVGEETNITLNDLKPAMDYHAKVQ  100 (137)
T ss_dssp             CCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTT--SCCEEEEEESCSEEEECSCCTTCEECEEEE
T ss_pred             CcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCC--CceEEEEecCccEEEEcCCCCCCEEEEEEE
Confidence            4557899999999999887643 21      1  68999876554322  111224457778999999999999999999


Q ss_pred             eccCCccCccee-eEEecC
Q 005110          397 SSNGTTELGRCE-IWFSTG  414 (714)
Q Consensus       397 sF~~~~elg~~E-~k~~T~  414 (714)
                      ++++.|.=-.+| +.|.|.
T Consensus       101 A~n~~G~G~~S~~~~f~T~  119 (137)
T 1wk0_A          101 AEYNSIKGTPSEAEIFTTL  119 (137)
T ss_dssp             EEETTEECCCCCCCCEECC
T ss_pred             EEeCCCcCCCCCCEEEECC
Confidence            999876422333 334444

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A

Probab=97.71  E-value=0.00012  Score=71.01  Aligned_cols=87  Identities=20%  Similarity=0.156  Sum_probs=65.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++.++++++|+|-.....   ..|.||.|.|+...... ..-..++....+.+.|+||.|.|.|.|+|.++++.|
T Consensus       204 ~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g  279 (290)
T 3r8q_A          204 APSNLRFLATTPNSLLVSWQPPR---ARITGYIIKYEKPGSPP-REVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQ  279 (290)
T ss_dssp             CCEEEEEEEEETTEEEEEEECCS---SCCCEEEEEEECTTSCC-EECSSCCCTTCCEEEECSCCTTCEEEEEEEEEETTE
T ss_pred             CCCccEEEeeCCCEEEEEEeCCC---CcccEEEEEEEeCCCCc-ceeEeccCCCccEEEECCCCCCCEEEEEEEEEeCCC
Confidence            44578999999999999987654   47999999999875531 111112335688999999999999999999999987


Q ss_pred             cCcceeeEEec
Q 005110          403 ELGRCEIWFST  413 (714)
Q Consensus       403 elg~~E~k~~T  413 (714)
                      .-...-++..|
T Consensus       280 ~s~p~~~~~~T  290 (290)
T 3r8q_A          280 KSEPLIGRKKT  290 (290)
T ss_dssp             ECCCEEEEEEC
T ss_pred             cCCccccccCC
Confidence            65554444433

>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*

Probab=97.67  E-value=0.00014  Score=76.78  Aligned_cols=85  Identities=13%  Similarity=0.130  Sum_probs=61.2

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceee-ecCCceeEeecCCcceeeeEEEEeccCC-c
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTL-FAPNTRFVVTGLCPATEYQFKVVSSNGT-T  402 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~-~~p~~r~~vs~L~P~TEY~fkvvsF~~~-~  402 (714)
                      ..+|.+++|++||+|-....  ....|..|.|=|+....  ..++.+++ ....++..|+||.|.|+|.|.|.+.+.. |
T Consensus       374 ~~l~~~~~~~~s~~l~W~~p--~~~~~~~y~v~y~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~~g  449 (461)
T 3csg_A          374 TNLEVVAATPTSLLISWDAS--YSSSVSYYRITYGETGG--NSPVQEFTVPGSKSTATISGLSPGVDYTITVYAYSYYYY  449 (461)
T ss_dssp             CCCEEEEECSSCEEEECCCT--TGGGCSEEEEEEEETTC--CSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECTTSC
T ss_pred             cceEEeccCCCeEEEEecCC--CCCcceEEEEEEEECCC--CccceEEEecCCCceEEecCCCCCCEEEEEEEEEeccCC
Confidence            36899999999999988655  33479999994444321  12244444 5558999999999999999999999987 2


Q ss_pred             cCc-ceeeEEec
Q 005110          403 ELG-RCEIWFST  413 (714)
Q Consensus       403 elg-~~E~k~~T  413 (714)
                      .++ ..|+..+|
T Consensus       450 ~~s~~~~~~~~~  461 (461)
T 3csg_A          450 YYSSPISINYRT  461 (461)
T ss_dssp             BCSCCEEEEEEC
T ss_pred             CCCCCEEEeccC
Confidence            222 23555554

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}

Probab=97.67  E-value=0.00016  Score=65.09  Aligned_cols=77  Identities=22%  Similarity=0.288  Sum_probs=61.0

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      +..+++.++++++|+|-++.... ....|.||.|.|+..... +.   ........+.+.|.+|.|.|.|.|+|.+++..
T Consensus         9 P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~---~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~   85 (197)
T 3lpw_A            9 PQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYS---TVATNCHKTSWKVDQLQEGCSYYFRVLAENEY   85 (197)
T ss_dssp             CEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCE---EEEEEECSSEEEECCCCTTCEEEEEEEEEETT
T ss_pred             CCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccE---EeecCCCccEEEEcCCCCCCEEEEEEEEEcCc
Confidence            34688999999999999988643 334599999999987543 21   12235678899999999999999999999987


Q ss_pred             cc
Q 005110          402 TE  403 (714)
Q Consensus       402 ~e  403 (714)
                      |.
T Consensus        86 g~   87 (197)
T 3lpw_A           86 GI   87 (197)
T ss_dssp             EE
T ss_pred             cc
Confidence            75

>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}

Probab=97.67  E-value=0.00031  Score=61.62  Aligned_cols=85  Identities=22%  Similarity=0.215  Sum_probs=61.1

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      ..-+++.+++.+||++.+...+.....|.+|+|=|.....      ..++....+.+.|+||.|.|+|.|.|.+..+..+
T Consensus        11 v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~------~~~~~~~~t~~~i~gL~PgT~Y~~~V~A~~~~~~   84 (104)
T 2dle_A           11 VFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD------SSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDIE   84 (104)
T ss_dssp             EEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC------EEEEEESSSEEECCSCCSSCEEEEEEEEESSSCC
T ss_pred             CceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC------eEEEcCCCCEEEECCCCCCCEEEEEEEEEECCcc
Confidence            3578999999999999997554344557899996653211      2355667899999999999999999999865444


Q ss_pred             CcceeeEEecC
Q 005110          404 LGRCEIWFSTG  414 (714)
Q Consensus       404 lg~~E~k~~T~  414 (714)
                      =...=..+.|.
T Consensus        85 ~~p~~~~~~T~   95 (104)
T 2dle_A           85 GTPGFLQVHTP   95 (104)
T ss_dssp             CBCEEEEEECC
T ss_pred             cCCeeEEEEcc
Confidence            33333444453

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1

Probab=97.60  E-value=0.00023  Score=64.19  Aligned_cols=81  Identities=20%  Similarity=0.282  Sum_probs=57.8

Q ss_pred             EEEeeceeEEEEeCcCCCC----CCC-cceEEEEeeec-CCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          329 FEDVRATSLTVVLGSEDPS----PGN-IISYTLWHRRA-HEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       329 FE~vt~tSv~vvL~~~~~s----~~~-i~Gy~LWhrks-~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      ..+|+++||+|-++.....    ... |.+|.|- ++. ... |.    -+...+.+.+.|.+|.|.|+|.|||.+++..
T Consensus        24 v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve-~~~~~~~~~~----~v~~~~~t~~~v~gL~p~t~Y~frV~A~n~~   98 (120)
T 1wfu_A           24 VGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIE-EEDPKMHSYG----VIYTGYATRHVVEGLEPRTLYKFRLKVTSPS   98 (120)
T ss_dssp             CCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEE-EECTTTCCEE----EEEEESCSEEEEESCCTTCEEEEEEEEECSS
T ss_pred             eceEECCEEEEEECCCccCCccCCCCceEEEEEE-EecCCCCceE----EEecCCccEEEECCCCCCCEEEEEEEEECCC
Confidence            5699999999999876532    233 9999999 443 222 32    2334557889999999999999999999987


Q ss_pred             ccCccee-eEEecC
Q 005110          402 TELGRCE-IWFSTG  414 (714)
Q Consensus       402 ~elg~~E-~k~~T~  414 (714)
                      |.-.-++ +.+.|.
T Consensus        99 G~s~~S~~~~~~T~  112 (120)
T 1wfu_A           99 GEYEYSPVVSVATT  112 (120)
T ss_dssp             SCEEECCCEEEECC
T ss_pred             CCCCCCccEeeEcC
Confidence            7433233 445554

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B

Probab=97.59  E-value=0.00028  Score=70.70  Aligned_cols=88  Identities=17%  Similarity=0.145  Sum_probs=66.6

Q ss_pred             ccCceEEEEEeece-eEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          322 IVPNMVKFEDVRAT-SLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       322 ~~~~~~rFE~vt~t-Sv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      .++..++++.++++ +|+|-.+....  .+|.||.|.|+.....-...-..++....+.+.|++|.|.|+|.|+|.++++
T Consensus         4 ~~P~~l~~~~~~~~~sv~l~W~~~~~--~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   81 (375)
T 3t1w_A            4 SPPTNLHLEANPDTGVLTVSWERSTT--PDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKD   81 (375)
T ss_dssp             CCCEEEEEEEETTTTEEEEEEECCSC--SSCCEEEEEEEETTCTTSCCEEEEEETTCCEEEECCCCTTCCEEEEEEEEET
T ss_pred             CCCCccEEEecCCCeEEEEEEeCCCC--CCeeeEEEEEEECCCCCCcceeEEcCCCccEEEEcCCcCCCEEEEEEEEEcC
Confidence            35567899999999 99999986532  4799999999987653111112345667899999999999999999999998


Q ss_pred             CccCcceeeEE
Q 005110          401 TTELGRCEIWF  411 (714)
Q Consensus       401 ~~elg~~E~k~  411 (714)
                      .+.-.......
T Consensus        82 ~g~s~~~~~~~   92 (375)
T 3t1w_A           82 DKESVPISDTI   92 (375)
T ss_dssp             TEECCCEEEEE
T ss_pred             CCCCCcEEeeE
Confidence            76544444443

>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=97.56  E-value=0.00024  Score=68.88  Aligned_cols=92  Identities=9%  Similarity=0.084  Sum_probs=64.5

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CC------------------CCCceeeecCCceeEe
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FP------------------ARPTCTLFAPNTRFVV  382 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~------------------~ept~~~~~p~~r~~v  382 (714)
                      +++.......++++||+|.+.........|.||.|.|+..... ..                  ....+++........+
T Consensus        88 ~~~~~~~~~~~~~~sv~l~W~~P~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  167 (232)
T 4go6_B           88 PGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAH  167 (232)
T ss_dssp             CCCCEEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBC
T ss_pred             CCCCeeeEEecCCCEEEEEEeCCCCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEee
Confidence            3444556668899999999987665556799999999865443 11                  1223444455556667


Q ss_pred             ecCCcceeeeEEEEeccCCccCcceeeEEec
Q 005110          383 TGLCPATEYQFKVVSSNGTTELGRCEIWFST  413 (714)
Q Consensus       383 s~L~P~TEY~fkvvsF~~~~elg~~E~k~~T  413 (714)
                      .+|.|.|+|.|||.++|..|.=-.+|++..+
T Consensus       168 ~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~  198 (232)
T 4go6_B          168 IDYTTKPAIIFRIAARNEKGYGPATQVRWLQ  198 (232)
T ss_dssp             BEESSSEEEEEEEEEECSSCBCCCEEEEEEC
T ss_pred             ecCccCCceEEEEEEECCCcCCCCcccEEec
Confidence            8999999999999999998853356777654

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B

Probab=97.54  E-value=0.00034  Score=70.12  Aligned_cols=90  Identities=21%  Similarity=0.218  Sum_probs=69.8

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      +|++..+++..++++||+|-.....  ...|.||.|.|+...... ..-..++....+.+.|++|.|.|+|.|+|.+++.
T Consensus        96 ~p~p~~l~~~~~~~~si~l~W~~~~--~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  172 (375)
T 3t1w_A           96 VPQLTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGI-PIFEDFVDSSVGYYTVTGLEPGIDYDISVITLIN  172 (375)
T ss_dssp             CCCCSCCEEECCCSSEEEEECCCCC--CTTEEEEEEEEEESSSCC-SCEEEEECTTCCEEEEECCCTTCEEEEEEEEEET
T ss_pred             CCCCceEEEEecCCCeEEEEEECCC--CCCceEEEEEEEECCCCC-ceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeC
Confidence            3445678899999999999988643  357999999999765431 1112345667899999999999999999999999


Q ss_pred             CccCcceeeEEec
Q 005110          401 TTELGRCEIWFST  413 (714)
Q Consensus       401 ~~elg~~E~k~~T  413 (714)
                      .|.-..+.+...|
T Consensus       173 ~g~s~~s~~~~~t  185 (375)
T 3t1w_A          173 GGESAPTTLTQQT  185 (375)
T ss_dssp             TEECCCEEEEEEC
T ss_pred             CcccCCeeeeeec
Confidence            8866666666666

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A

Probab=97.53  E-value=0.00065  Score=63.50  Aligned_cols=87  Identities=10%  Similarity=0.069  Sum_probs=63.9

Q ss_pred             ceEEEEEee----ceeEEEEeCcCCCC-CC---CcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEE
Q 005110          325 NMVKFEDVR----ATSLTVVLGSEDPS-PG---NIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVV  396 (714)
Q Consensus       325 ~~~rFE~vt----~tSv~vvL~~~~~s-~~---~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvv  396 (714)
                      ..+.++.+.    +++|+|-....... ..   .+.+|.|-||.....   +-........+.+.|.+|.|.|+|.|||-
T Consensus       107 ~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~---~~~~~~~~~~~~~~l~~L~p~t~Y~v~Vr  183 (210)
T 3n06_B          107 LELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAA---EWEIHFAGQQTEFKILSLHPGQKYLVQVR  183 (210)
T ss_dssp             EEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCS---SCEEEEEETCSEEEECCCCTTCEEEEEEE
T ss_pred             ceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCC---CCEEEeccCceEEEEeccCCCCEEEEEEE
Confidence            346666553    68999988776532 11   379999999987653   12224456788999999999999999999


Q ss_pred             eccCCccCcce--eeEEecC
Q 005110          397 SSNGTTELGRC--EIWFSTG  414 (714)
Q Consensus       397 sF~~~~elg~~--E~k~~T~  414 (714)
                      ++++.|..|.|  ++.+.|.
T Consensus       184 a~~~~g~wS~wS~~~~~~Tp  203 (210)
T 3n06_B          184 CKPDHGYWSAWSPATFIQIP  203 (210)
T ss_dssp             EEESSSCCCCCCCCEEEECC
T ss_pred             EecCCCcccCCCCceeEECc
Confidence            99987777766  5566664

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A

Probab=97.36  E-value=0.00086  Score=62.10  Aligned_cols=87  Identities=18%  Similarity=0.218  Sum_probs=60.4

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeee-----cCCceeEeecCCcceeeeEEEEe
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLF-----APNTRFVVTGLCPATEYQFKVVS  397 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~-----~p~~r~~vs~L~P~TEY~fkvvs  397 (714)
                      +-.+++..+++ +++|-.+.... ....|.||.|.||.....   +...+..     ...+.+.|+||.|.|.|.|||.+
T Consensus        12 P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A   87 (209)
T 2vkw_A           12 PSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEE---VWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAA   87 (209)
T ss_dssp             CEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCC---CCEEEEEEHHHHHHHSEEEECCCCTTCEEEEEEEE
T ss_pred             CcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCC---CceEeEeeccCCCccceEEeCCCCCCCeEEEEEEE
Confidence            34678888888 67887777543 334599999999977543   1222222     23568999999999999999999


Q ss_pred             ccCCccCcceee-EEecC
Q 005110          398 SNGTTELGRCEI-WFSTG  414 (714)
Q Consensus       398 F~~~~elg~~E~-k~~T~  414 (714)
                      ++..|.-..++. .+.|.
T Consensus        88 ~n~~G~~~~s~~~~~~T~  105 (209)
T 2vkw_A           88 LNGKGLGEISAASEFKTQ  105 (209)
T ss_dssp             EETTEECCCCCCEEEECC
T ss_pred             EcCCcccCCccccccccc
Confidence            998875433333 34443

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A

Probab=97.36  E-value=0.00068  Score=67.53  Aligned_cols=86  Identities=17%  Similarity=0.151  Sum_probs=64.9

Q ss_pred             cCceEEEEEeece-eEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          323 VPNMVKFEDVRAT-SLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       323 ~~~~~rFE~vt~t-Sv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      ++..+++..++.+ ||+|-.+...  ...|.||.|.|+.........-..++....+.+.|++|.|.|+|.|+|.+++..
T Consensus         4 ~P~~l~~~~~~~~~sv~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~   81 (368)
T 1fnf_A            4 PPTNLHLEANPDTGVLTVSWERST--TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDD   81 (368)
T ss_dssp             CCEEEEEEECSSSSCEEEEEECCS--CSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEEEEETT
T ss_pred             CCcceEEEecCCCcEEEEEEeCCC--CCCceEEEEEEEECCCCCCceeEEEecCCcCEEEECCCCCCCEEEEEEEEEcCC
Confidence            4457888999987 6999887754  356999999999876542222233456778899999999999999999999988


Q ss_pred             ccCcceeeE
Q 005110          402 TELGRCEIW  410 (714)
Q Consensus       402 ~elg~~E~k  410 (714)
                      |.-......
T Consensus        82 g~s~~~~~~   90 (368)
T 1fnf_A           82 KESVPISDT   90 (368)
T ss_dssp             EECCCEEEE
T ss_pred             CccCceeee
Confidence            754444443

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A

Probab=97.34  E-value=0.00026  Score=66.09  Aligned_cols=81  Identities=12%  Similarity=0.076  Sum_probs=55.8

Q ss_pred             ceEEEEEe------eceeEEEEeCcCCCCCCCcceEEEEee-ecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEE
Q 005110          325 NMVKFEDV------RATSLTVVLGSEDPSPGNIISYTLWHR-RAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVV  396 (714)
Q Consensus       325 ~~~rFE~v------t~tSv~vvL~~~~~s~~~i~Gy~LWhr-ks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvv  396 (714)
                      ..+.++.+      ++++|+|-.........-+.||.|.|| ..... +..  .-.+...++.+.|.+|.|.|+|.|||-
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~--~~~~~~~~~~~~l~~L~p~t~Y~~~Vr  190 (215)
T 1cd9_B          113 MLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTL--VFHLPSSKDQFELCGLHQAPVYTLQMR  190 (215)
T ss_dssp             EEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEE--EEEEESCEEEEEECCCCSCSCEEEEEE
T ss_pred             cEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEE--EecccCcceEEEEcCCCCCCEEEEEEE
Confidence            34666666      688999998766543333479999999 54433 221  112344578899999999999999999


Q ss_pred             eccC--CccCcce
Q 005110          397 SSNG--TTELGRC  407 (714)
Q Consensus       397 sF~~--~~elg~~  407 (714)
                      +++.  .|.+|.|
T Consensus       191 a~~~~g~G~wS~w  203 (215)
T 1cd9_B          191 CIRSSLPGFWSPW  203 (215)
T ss_dssp             EEESSSCCCCCCC
T ss_pred             eeECCCCCCCcCC
Confidence            9997  4455544

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A

Probab=97.32  E-value=0.00055  Score=68.71  Aligned_cols=87  Identities=11%  Similarity=0.065  Sum_probs=61.3

Q ss_pred             ceEEEEEee--ceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          325 NMVKFEDVR--ATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       325 ~~~rFE~vt--~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      ..++++.++  +++|+|-......  ...-+.+|.|+||..... +..   ..+...++.++|.+|.|.|+|.|||.+++
T Consensus       201 ~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~---~~~~~~~~~~~l~~L~p~t~Y~~rVrA~n  277 (325)
T 1n26_A          201 ANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTT---WMVKDLQHHCVIHDAWSGLRHVVQLRAQE  277 (325)
T ss_dssp             EEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEE---EECGGGCSEEEESSCCTTCCEEEEEEEEE
T ss_pred             cceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEE---EcccCCceEEEEeCCCCCCeEEEEEEEec
Confidence            457788886  4689998877653  334579999999987543 321   11234578999999999999999999999


Q ss_pred             C--CccCcce-eeEEecC
Q 005110          400 G--TTELGRC-EIWFSTG  414 (714)
Q Consensus       400 ~--~~elg~~-E~k~~T~  414 (714)
                      .  .|.++.| +..+.|.
T Consensus       278 ~~g~G~~S~wS~~~~~~~  295 (325)
T 1n26_A          278 EFGQGEWSEWSPEAMGTP  295 (325)
T ss_dssp             TTTBSCCCCCCCCEEECC
T ss_pred             CCCCCCCcCCCCccceec
Confidence            5  4556654 4444443

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A

Probab=97.31  E-value=0.0009  Score=66.68  Aligned_cols=82  Identities=28%  Similarity=0.375  Sum_probs=63.1

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      ++..+++..+++++|+|-.....   ..|.||+|.|+.....  ..+ ...+....+.+.|.||.|.|.|.|+|.+++..
T Consensus       188 ~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~  262 (368)
T 1fnf_A          188 SPTGIDFSDITANSFTVHWIAPR---ATITGYRIRHHPEHFS--GRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGR  262 (368)
T ss_dssp             CCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECSCCS--SCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETT
T ss_pred             CCCccEEEEccCCEEEEEEeCCC---CCcCEEEEEEecCCCC--CCccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCC
Confidence            44568899999999999987653   5799999999977543  112 23455678899999999999999999999988


Q ss_pred             ccCcceee
Q 005110          402 TELGRCEI  409 (714)
Q Consensus       402 ~elg~~E~  409 (714)
                      |.-.....
T Consensus       263 g~~~~~~~  270 (368)
T 1fnf_A          263 EESPLLIG  270 (368)
T ss_dssp             EECCCEEE
T ss_pred             ccCCcccc
Confidence            75333333

>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.30  E-value=0.0011  Score=56.99  Aligned_cols=73  Identities=16%  Similarity=0.190  Sum_probs=55.4

Q ss_pred             CceEEEEEee--ceeEEEEeCcCCC---CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEe
Q 005110          324 PNMVKFEDVR--ATSLTVVLGSEDP---SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVS  397 (714)
Q Consensus       324 ~~~~rFE~vt--~tSv~vvL~~~~~---s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvs  397 (714)
                      +.-++++.+.  +++|+|-.+....   ....+.+|.|.||..... +.    .+.....+.+.|.+|.|+|+|.|+|-+
T Consensus        11 P~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~----~~~~~~~~~~~l~~L~p~t~Y~~~VRa   86 (109)
T 1uc6_A           11 PENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQ----HVELSNGTAHTITDAYAGKEYIIQVAA   86 (109)
T ss_dssp             CEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCC----CEEESSCSEEEETTCCSSSCEEEEEEC
T ss_pred             CcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcE----EEecccCCEEEEeCCCCCCEEEEEEEE
Confidence            3446777764  6899998877653   223689999999998764 32    234556889999999999999999999


Q ss_pred             ccC
Q 005110          398 SNG  400 (714)
Q Consensus       398 F~~  400 (714)
                      .+.
T Consensus        87 ~~~   89 (109)
T 1uc6_A           87 KDN   89 (109)
T ss_dssp             CBS
T ss_pred             EeC
Confidence            874

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=97.22  E-value=0.00086  Score=74.67  Aligned_cols=87  Identities=21%  Similarity=0.249  Sum_probs=63.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +..++...++++||+|-++..+.....|.||.|.|+.....   ....++....+.+.|+||.|.|+|.|+|.+++..|.
T Consensus       444 Ps~~~~~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~---~~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~  520 (536)
T 3fl7_A          444 PPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDS---NSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQ  520 (536)
T ss_dssp             CCEEEEEECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--C---CCCEEEEESSSEEECCSCCSSCEEEEEEEEECC---
T ss_pred             CCCCceeeccCCeEEEEEECCcCCCCcccEEEEEEEECCCC---ceEEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcc
Confidence            33456699999999999987654556799999999987653   334466788999999999999999999999999885


Q ss_pred             Ccc-e-eeEEecC
Q 005110          404 LGR-C-EIWFSTG  414 (714)
Q Consensus       404 lg~-~-E~k~~T~  414 (714)
                       |. + .+.+.|.
T Consensus       521 -Gp~S~~v~~~T~  532 (536)
T 3fl7_A          521 -GAGSKVHEFQTL  532 (536)
T ss_dssp             -CEECCCEEEECC
T ss_pred             -cCCCCCEEEEeC
Confidence             43 2 4455553

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}

Probab=97.13  E-value=0.0013  Score=73.57  Aligned_cols=82  Identities=17%  Similarity=0.132  Sum_probs=59.6

Q ss_pred             EEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCC--CCCC------ceeeecCCceeEeecCCcceeeeEEEEe
Q 005110          327 VKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGF--PARP------TCTLFAPNTRFVVTGLCPATEYQFKVVS  397 (714)
Q Consensus       327 ~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y--~~ep------t~~~~~p~~r~~vs~L~P~TEY~fkvvs  397 (714)
                      |++++++++ |+|-++.... ....|+||+|.|+......  ..-+      +.+++...+.++|+||.|.|+|.|+|.+
T Consensus       535 v~v~~~~~t-i~lsW~pP~~~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A  613 (680)
T 1zlg_A          535 FIVQDVNIT-GHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQV  613 (680)
T ss_pred             EEEeccCce-EEEEecCCCCCCCCCceeEEEEEEEccCCCccccccceeeecccccCCcccEEEecCCCCCceEEEEEEE
Confidence            788888887 8888876643 3568999999998763321  1111      1234456889999999999999999999


Q ss_pred             ccCCccCcceeeE
Q 005110          398 SNGTTELGRCEIW  410 (714)
Q Consensus       398 F~~~~elg~~E~k  410 (714)
                      |+..|+ |..+..
T Consensus       614 ~n~~G~-G~~~~~  625 (680)
T 1zlg_A          614 LTPGGE-GPATIK  625 (680)
T ss_pred             EcCCCc-CCCcce
Confidence            998874 544433

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}

Probab=97.06  E-value=0.0014  Score=72.85  Aligned_cols=88  Identities=16%  Similarity=0.180  Sum_probs=64.4

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC---CC--CCC-ceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG---FP--ARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~---y~--~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      .+.... +++||+|-.+........|.||+|.||.....   +.  ... +.++....+.++|+||.|.|.|.|||.+++
T Consensus       469 ~~~~~~-~~~si~l~W~~P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n  547 (731)
T 2v5y_A          469 SIQGST-FEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRAST  547 (731)
T ss_dssp             TCEEEE-ETTEEEEECCCCSCCSSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCTTEEEEEEEEEEE
T ss_pred             eEEeee-cCCeEEEEEcCCCCCCCCccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCCCCCEEEEEEEEEe
Confidence            444443 58899999887654456899999999987542   11  111 223456778999999999999999999999


Q ss_pred             CCccCcceeeEEecC
Q 005110          400 GTTELGRCEIWFSTG  414 (714)
Q Consensus       400 ~~~elg~~E~k~~T~  414 (714)
                      ..|.=-.+++.+.|.
T Consensus       548 ~~G~g~~s~~~~~T~  562 (731)
T 2v5y_A          548 AKGFGPPATNQFTTK  562 (731)
T ss_dssp             TTEEEEEEEEEEECC
T ss_pred             CCccCCCcccEEEcC
Confidence            987655567777765

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A

Probab=97.04  E-value=0.002  Score=62.17  Aligned_cols=85  Identities=12%  Similarity=-0.054  Sum_probs=58.1

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCC--CCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFP--ARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~--~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      .++..... +||+|-......   .|.||.|-|+.....-.  .+-..+.....+.++|.||.|.|+|.|+|.+++..|.
T Consensus       107 ~~~~~~~~-~si~l~W~~p~~---~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~  182 (290)
T 3l5i_A          107 DLKAFPKD-NMLWVEWTTPRE---SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGP  182 (290)
T ss_dssp             EEEEEEET-TEEEEEEECCSS---CCCEEEEEEEEECSSSCCCCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTEE
T ss_pred             eeEEEeCC-CeEEEEEeCCCC---CCCcEEEEEEECCCCCCCCcCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCcc
Confidence            45555554 789888876543   79999999888755411  1111223445667888999999999999999999875


Q ss_pred             CcceeeEEecC
Q 005110          404 LGRCEIWFSTG  414 (714)
Q Consensus       404 lg~~E~k~~T~  414 (714)
                      =....+..+|.
T Consensus       183 g~~~~~~~~t~  193 (290)
T 3l5i_A          183 GSPESIKAYLK  193 (290)
T ss_dssp             CCCEEEEEESS
T ss_pred             cccEEEEeEcc
Confidence            43444555554

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}

Probab=97.03  E-value=0.0018  Score=72.35  Aligned_cols=92  Identities=11%  Similarity=0.167  Sum_probs=64.6

Q ss_pred             cCceEEEEEe--ece---eEEEEeCcCCCCCCCcceEEEEeeecC--C-CCC--CCCceeeecCCceeEeecCCcceeee
Q 005110          323 VPNMVKFEDV--RAT---SLTVVLGSEDPSPGNIISYTLWHRRAH--E-GFP--ARPTCTLFAPNTRFVVTGLCPATEYQ  392 (714)
Q Consensus       323 ~~~~~rFE~v--t~t---Sv~vvL~~~~~s~~~i~Gy~LWhrks~--~-~y~--~ept~~~~~p~~r~~vs~L~P~TEY~  392 (714)
                      ++..+++.++  +++   ||+|-+.........|.||+|.|+...  . ..+  ......+..+.+.+.|+||.|.|+|.
T Consensus       269 ~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~  348 (680)
T 1zlg_A          269 APANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYV  348 (680)
T ss_pred             CCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEeCCCCCCCEEE
Confidence            4456888888  888   999999866534467999999998331  1 111  11223455567899999999999999


Q ss_pred             EEEEeccCCccCccee----eEEecC
Q 005110          393 FKVVSSNGTTELGRCE----IWFSTG  414 (714)
Q Consensus       393 fkvvsF~~~~elg~~E----~k~~T~  414 (714)
                      |||.+++..|.=..++    +.+.|.
T Consensus       349 ~~V~A~n~~G~g~~S~~~~~v~~~T~  374 (680)
T 1zlg_A          349 VELQAITYWGQTRLKSAKVSLHFTST  374 (680)
T ss_pred             EEEEEEECCCcCCCCCCceeEEEECC
Confidence            9999999877532222    555554

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1

Probab=97.01  E-value=0.0009  Score=66.34  Aligned_cols=87  Identities=16%  Similarity=0.181  Sum_probs=56.9

Q ss_pred             ceEEEEEe------eceeEEEEeCcCCCCCCCcceEEEEee-ecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEE
Q 005110          325 NMVKFEDV------RATSLTVVLGSEDPSPGNIISYTLWHR-RAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVV  396 (714)
Q Consensus       325 ~~~rFE~v------t~tSv~vvL~~~~~s~~~i~Gy~LWhr-ks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvv  396 (714)
                      ..++.+.+      ++++|+|-.+........+.||.|.|| ..... +...  -.+...++.+.|.+|.|.|+|.|||.
T Consensus       207 ~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~--~~~~~~~~~~~l~~L~p~t~Y~~rVr  284 (313)
T 2d9q_B          207 MLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALV--GPLPLEALQYELCGLLPATAYTLQIR  284 (313)
T ss_dssp             EEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEE--EEECSCEEEEEECSCCSCCCEEEEEE
T ss_pred             ceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEc--ccccCcceEEEEeCCCCCCeEEEEEE
Confidence            34566665      578999988876533333679999999 44332 3211  11233567899999999999999999


Q ss_pred             eccCC--ccCcce--eeEEec
Q 005110          397 SSNGT--TELGRC--EIWFST  413 (714)
Q Consensus       397 sF~~~--~elg~~--E~k~~T  413 (714)
                      +++..  |.++.|  ++.+.|
T Consensus       285 a~~~~g~G~wS~wS~~~~~~T  305 (313)
T 2d9q_B          285 CIRWPLPGHWSDWSPSLELRT  305 (313)
T ss_dssp             EEECSSCCCCCCCCCCEEECC
T ss_pred             eeECCCCCccCCCCCccceeC
Confidence            99974  444433  344444

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E

Probab=97.00  E-value=0.00096  Score=77.38  Aligned_cols=112  Identities=15%  Similarity=0.214  Sum_probs=75.6

Q ss_pred             HHHHHHHHHhhhhhhcCCCC-CCCCC-------CCCCcccCceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecC
Q 005110          292 QKLCACAVESLDKMISNTIL-PNPSV-------QGSNVIVPNMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAH  362 (714)
Q Consensus       292 QKLCs~Aie~~Ds~ls~~~~-~~~~~-------q~~~l~~~~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~  362 (714)
                      .+||-.-|..++.++..... ....+       +..--+..-.+++.+++++||+|-+..... ....|.||.|.||.+.
T Consensus       432 ~~LC~~~i~~~~~~~g~~~~~~~~di~~~tNgd~~~C~~~~~~l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~  511 (897)
T 2dtg_E          432 PKLCLSEIHKMEEVSGTKGRQERNDIALKTNGDQASCENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAP  511 (897)
T ss_dssp             TTSCHHHHHHHHHHTTCSSSCCSSSBCSTTBSTTCCCSCCBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCC
T ss_pred             CcccccccccHHHhcCCcccccccceehhhcCCccccccceeEEEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCC
Confidence            47999999999998654321 00000       111122334678999999999999987764 4457999999999863


Q ss_pred             CC----CCCCCce----------eeec--------CCceeEeecCCcceeeeEEEEe-ccCCcc
Q 005110          363 EG----FPARPTC----------TLFA--------PNTRFVVTGLCPATEYQFKVVS-SNGTTE  403 (714)
Q Consensus       363 ~~----y~~ept~----------~~~~--------p~~r~~vs~L~P~TEY~fkvvs-F~~~~e  403 (714)
                      ..    |.....|          ..+.        ..+.++|++|.|.|+|.|||.+ ++..|+
T Consensus       512 ~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~L~P~T~Y~~~V~A~~n~~G~  575 (897)
T 2dtg_E          512 YQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDE  575 (897)
T ss_dssp             TTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEECSCCSSCBCCBEEEECCCCCSS
T ss_pred             CCCcccccCccccCCCcceEEecCCCccccccccccccceEeCCCCCCcEEEEEEEEEEeccCC
Confidence            11    1111111          0111        2588999999999999999999 998886

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=96.99  E-value=0.0027  Score=70.73  Aligned_cols=77  Identities=18%  Similarity=0.123  Sum_probs=56.3

Q ss_pred             EEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCCC------CCCCc---eeeecCCceeEeecCCcceeeeEEEEec
Q 005110          329 FEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEGF------PARPT---CTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       329 FE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~y------~~ept---~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      ..+|+++||+|-....... ...|.||.|+|++.....      .....   .......+++.|+||.|.|.|.|||.++
T Consensus       341 ~~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~  420 (536)
T 3fl7_A          341 TAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEAR  420 (536)
T ss_dssp             EEECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEE
T ss_pred             EEEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEE
Confidence            4579999999999876543 336999999999843210      00100   0122468899999999999999999999


Q ss_pred             cCCccCc
Q 005110          399 NGTTELG  405 (714)
Q Consensus       399 ~~~~elg  405 (714)
                      ++.|..+
T Consensus       421 N~~G~~s  427 (536)
T 3fl7_A          421 NGVSGLV  427 (536)
T ss_dssp             CTTGGGC
T ss_pred             ecCCCCC
Confidence            9988864

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}

Probab=96.92  E-value=0.00026  Score=75.48  Aligned_cols=75  Identities=15%  Similarity=0.212  Sum_probs=61.5

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ..+++.+++++||+|-.....+  ....|.||.|-|+.....   +....+....+.+.|+||.|.|.|.|+|.+++..|
T Consensus       500 p~l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G  576 (589)
T 3l5h_A          500 PTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN---ETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG  576 (589)
T ss_dssp             CCCCEECCCSSCBEEBCCCCCHHHHCSCEEEEEECCBCSSCC---CCCEEECTTCCBCCBCSCCSSCCEECCEEEEETTE
T ss_pred             CeEEEeecccceEEEEecCCCHHHcCccceeEEEEEEeCCCC---eEEEEeCCcccEEEecCCCCCCEEEEEEEEEeCCC
Confidence            4588889999999999887432  346899999999876553   12345667889999999999999999999999998

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A

Probab=96.88  E-value=0.003  Score=58.53  Aligned_cols=76  Identities=12%  Similarity=0.025  Sum_probs=57.1

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCcee-eecCCceeEeecC-CcceeeeEEEEeccCCcc
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCT-LFAPNTRFVVTGL-CPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~-~~~p~~r~~vs~L-~P~TEY~fkvvsF~~~~e  403 (714)
                      .++...++.++|+|......... .+.||.|.||......   ..|. .....+.+.|.+| .|.|+|.|||.+++..|.
T Consensus        13 ~l~~~~~~~~sv~l~W~~p~~~~-~~~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A~n~~G~   88 (215)
T 1bqu_A           13 NLSCIVNEGKKMRCEWDGGRETH-LETNFTLKSEWATHKF---ADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGK   88 (215)
T ss_dssp             EEEEEEETTSCCEEEEECCSCCS-SCCEEEEEEEETTEEC---CCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEE
T ss_pred             eeEeEECCCCcEEEEcCCCCCCC-CCceEEEEEEEcCCCc---cccccccCCcceEEEcCCccccccEEEEEEEEecccC
Confidence            47888889999999888765432 3579999999875431   1222 2334689999999 999999999999998876


Q ss_pred             Cc
Q 005110          404 LG  405 (714)
Q Consensus       404 lg  405 (714)
                      -.
T Consensus        89 ~~   90 (215)
T 1bqu_A           89 VT   90 (215)
T ss_dssp             EE
T ss_pred             cc
Confidence            43

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}

Probab=96.64  E-value=0.0017  Score=69.28  Aligned_cols=76  Identities=17%  Similarity=0.263  Sum_probs=57.5

Q ss_pred             EEE--EEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          327 VKF--EDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       327 ~rF--E~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      +++  .++++++|+|-..........+.+|.|.||..... +..-.........+.+.|.+|.|.|+|.|||.+++..|
T Consensus       205 ~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g  283 (589)
T 3l5h_A          205 LSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDG  283 (589)
T ss_dssp             CEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSS
T ss_pred             EEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCC
Confidence            445  56889999999887654445789999999988654 43322222334568999999999999999999999765

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}

Probab=96.63  E-value=0.0023  Score=71.19  Aligned_cols=90  Identities=13%  Similarity=0.123  Sum_probs=65.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-C--CCCCceeeecCCceeEeecCCcceeeeEEEEe
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-F--PARPTCTLFAPNTRFVVTGLCPATEYQFKVVS  397 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y--~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvs  397 (714)
                      ++..+++.++++++|+|-......  ....+.||.|.||..... .  -.+....+....+.+.|++|.|.|+|.|||.+
T Consensus       362 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A  441 (731)
T 2v5y_A          362 GPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLIL  441 (731)
T ss_dssp             CCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEE
T ss_pred             CCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEE
Confidence            455788999999999999887642  235678999999987532 1  00101134456789999999999999999999


Q ss_pred             ccCCccCccee-eEEec
Q 005110          398 SNGTTELGRCE-IWFST  413 (714)
Q Consensus       398 F~~~~elg~~E-~k~~T  413 (714)
                      ++..|. |.++ +.+.|
T Consensus       442 ~n~~G~-s~S~~~~~~T  457 (731)
T 2v5y_A          442 MNPEGR-KESQELIVQT  457 (731)
T ss_dssp             ECSSCE-EECCCEEEEC
T ss_pred             EcCCCC-CCCceEEEEc
Confidence            999887 4443 34444

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}

Probab=96.60  E-value=0.0095  Score=56.65  Aligned_cols=83  Identities=16%  Similarity=0.075  Sum_probs=58.5

Q ss_pred             eEEEEEeeceeEEEEeCcCCCC--CC--------CcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEE
Q 005110          326 MVKFEDVRATSLTVVLGSEDPS--PG--------NIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKV  395 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s--~~--------~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkv  395 (714)
                      .|++ ++..+||.|.+......  ..        .+.+|.|=||+.....  +  ..+..+++.+.|.+|.|.|+|+|+|
T Consensus        98 ~v~~-~~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~--~--~~~~~~~~~~~l~~L~p~t~Ycv~V  172 (201)
T 3lqm_A           98 GMQV-EVLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDE--K--FQITPQYDFEVLRNLEPWTTYCVQV  172 (201)
T ss_dssp             EEEE-EEETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCC--C--EEECCSSSEEEECSCCTTCEEEEEE
T ss_pred             EEEE-EEeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCc--E--EEEEecCceEEEecCCCCCcEEEEE
Confidence            5777 57789999998776521  21        3789999888754421  1  2345678899999999999999999


Q ss_pred             EeccCC-ccCcc-eeeEEec
Q 005110          396 VSSNGT-TELGR-CEIWFST  413 (714)
Q Consensus       396 vsF~~~-~elg~-~E~k~~T  413 (714)
                      -+++.. +..|. ++..|++
T Consensus       173 ~a~~~~~~~~g~~S~~~c~~  192 (201)
T 3lqm_A          173 RGFLPDRNKAGEWSEPVCEQ  192 (201)
T ss_dssp             EEEETTTTEECCCCCCEEEE
T ss_pred             EEEeccCCCCCCcCCCEeEE
Confidence            999863 33443 3555554

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}

Probab=96.50  E-value=0.0076  Score=60.80  Aligned_cols=84  Identities=19%  Similarity=0.245  Sum_probs=56.4

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCC-------CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEE
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPS-------PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVV  396 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s-------~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvv  396 (714)
                      +..|+++... +||+|.+. ....       -..+.+|.|-||+....   +. ..+..+.+++.|.||.|.|.|+|+|-
T Consensus       104 pP~v~~~~~~-~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~---~~-~~~~~~~~~~~l~~L~p~t~Y~~~V~  177 (306)
T 3s98_A          104 PPEVHLEAED-KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSG---VE-ERIENIYSRHKIYKLSPETTYCLKVK  177 (306)
T ss_dssp             CCEEEEEECS-SCEEEEEE-CC---CCCC-----CCEEEEEEEETTTC---CC-EEEEEECTEEEECSCCTTCEEEEEEE
T ss_pred             CCeEEEEEcC-CEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCC---Ce-EEEecccceEEEccCCCCCeEEEEEE
Confidence            3358877544 68999887 3211       24689999999987553   11 22455789999999999999999999


Q ss_pred             eccCC-ccCc-ceeeEEec
Q 005110          397 SSNGT-TELG-RCEIWFST  413 (714)
Q Consensus       397 sF~~~-~elg-~~E~k~~T  413 (714)
                      +|+.. ...| .++..|.+
T Consensus       178 A~~~~~~g~g~~S~~~~~~  196 (306)
T 3s98_A          178 AALLTSWKIGVYSPVHCIK  196 (306)
T ss_dssp             EEEGGGTEECCCCCCEEEE
T ss_pred             EEEccCCCCCCCCCcEeeE
Confidence            99942 2234 34555554

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E

Probab=96.38  E-value=0.0065  Score=70.53  Aligned_cols=40  Identities=18%  Similarity=0.217  Sum_probs=31.7

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecC
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAH  362 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~  362 (714)
                      ++-.+++..++++||+|.++........|.||.|+|+...
T Consensus       597 ~P~~l~~~~~s~tsI~LsW~pP~~~nG~I~~Y~V~~~~~~  636 (897)
T 2dtg_E          597 VPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQA  636 (897)
T ss_dssp             CCEEEEEEECSSSCEEEEEECCCCSSSSCSEEECCEEEEC
T ss_pred             CCcceEEEeCCCCEEEEEEeCCCCCCCCeeEEEEEEEECC
Confidence            3445899999999999999876544556999999887643

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=96.31  E-value=0.01  Score=65.81  Aligned_cols=75  Identities=16%  Similarity=0.277  Sum_probs=59.3

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      -...+++|+.+||++.+...... .-.|+||.|=+|..... ..    .+--.+.+.+.|+||.|.++|.|||.+.|..|
T Consensus        14 ~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~----~v~~~~~t~~~V~~L~~g~~Y~FRV~A~N~~G   89 (573)
T 3uto_A           14 RFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWS----PCAKSRYTYTTIEGLRAGKQYEFRIIAENKHG   89 (573)
T ss_dssp             EEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCE----EEEEESSSEEEECCCCTTCEEEEEEEEEETTE
T ss_pred             CCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceE----EeccccCCEEEeCCCCCCCcEeEEEEEEcCce
Confidence            45689999999999999876543 45799999988877654 32    11234788999999999999999999999866


Q ss_pred             c
Q 005110          403 E  403 (714)
Q Consensus       403 e  403 (714)
                      .
T Consensus        90 ~   90 (573)
T 3uto_A           90 Q   90 (573)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A

Probab=96.20  E-value=0.012  Score=57.80  Aligned_cols=74  Identities=12%  Similarity=0.023  Sum_probs=55.2

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCcee-eecCCceeEeecC-CcceeeeEEEEeccCCcc
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCT-LFAPNTRFVVTGL-CPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~-~~~p~~r~~vs~L-~P~TEY~fkvvsF~~~~e  403 (714)
                      .++.+.++.++|++-........ .+.||.|.||......   -.|. .....+.+.|.+| .|.|+|.|||.+++..|.
T Consensus       109 ~l~~~~~~~~~v~l~W~~~~~~~-~~~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~  184 (303)
T 1i1r_A          109 NLSCIVNEGKKMRCEWDGGRETH-LETNFTLKSEWATHKF---ADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGK  184 (303)
T ss_dssp             EEEEEEETTSCCEEEEECCSCCS-SCCEEEEEEEETTEEC---CCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEE
T ss_pred             eeEEEECCCCcEEEEccCCCCCC-CCcCEEEEEEecCCCC---ccCCCcCCCceEEEECCcCcccccEEEEEEEEcCCCC
Confidence            37777888899999988665322 3679999999765421   1122 2334688999999 999999999999998775

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*

Probab=96.18  E-value=0.015  Score=57.82  Aligned_cols=76  Identities=13%  Similarity=0.231  Sum_probs=53.1

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CC---CCCc-e------eeecCCceeEeecCCcceeee
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FP---ARPT-C------TLFAPNTRFVVTGLCPATEYQ  392 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~---~ept-~------~~~~p~~r~~vs~L~P~TEY~  392 (714)
                      +..++++ ++.++|+|-.+........+.+|.|=||..... ..   ..++ |      ......+.+.|.+|.|.|+|.
T Consensus       203 P~~l~~~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~  281 (314)
T 3bpo_C          203 PHIKNLS-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNT  281 (314)
T ss_dssp             CEEEEEE-EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEE
T ss_pred             CCEEEEE-EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEEE
Confidence            3457787 889999999887764334578999999976543 11   0000 0      012356789999999999999


Q ss_pred             EEEEeccC
Q 005110          393 FKVVSSNG  400 (714)
Q Consensus       393 fkvvsF~~  400 (714)
                      |||-+.+.
T Consensus       282 ~qVra~~~  289 (314)
T 3bpo_C          282 VRIRVKTN  289 (314)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEeeec
Confidence            99999985

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*

Probab=96.17  E-value=0.028  Score=54.56  Aligned_cols=92  Identities=16%  Similarity=0.195  Sum_probs=64.7

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCC--CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPS--PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s--~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      ++..++.+.+...++.|-......+  ...+.-|.|-||+....+.....-++...++.+.|.+|.|.|+|.|+|=+-+.
T Consensus       108 pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~  187 (214)
T 2b5i_B          108 APISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPL  187 (214)
T ss_dssp             CCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECSCCTTCEEEEEEEEEES
T ss_pred             CCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCCChheeeeeeecccceEEEeccCCCCCEEEEEEEEeeC
Confidence            4446777777778888888766542  23478999999987543333333345567899999999999999999999876


Q ss_pred             CccC---cce--eeEEecC
Q 005110          401 TTEL---GRC--EIWFSTG  414 (714)
Q Consensus       401 ~~el---g~~--E~k~~T~  414 (714)
                      .+..   |.|  ++.+.|.
T Consensus       188 ~~~~G~WS~WS~~~~~~T~  206 (214)
T 2b5i_B          188 QGEFTTWSPWSQPLAFRTK  206 (214)
T ss_dssp             CCSSCCCCCCCCCEEEECC
T ss_pred             CCCCCCccCCCCCEEEEcC
Confidence            4443   433  4555553

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A

Probab=96.15  E-value=0.019  Score=55.11  Aligned_cols=88  Identities=13%  Similarity=0.056  Sum_probs=61.5

Q ss_pred             CceEEEEEee-ceeEEEEeCcCCCC-CCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          324 PNMVKFEDVR-ATSLTVVLGSEDPS-PGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       324 ~~~~rFE~vt-~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      +..++.+.+. +++|.|-....... ...+.+|.|.||..... ...  ...+....+.+.|.+|.|.|+|.|+|-+...
T Consensus       125 P~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~--~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~  202 (227)
T 1eer_B          125 PVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQ--RVEILEGRTECVLSNLRGRTRYTFAVRARMA  202 (227)
T ss_dssp             CEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCC--EEEECTTCCEEEECCCCSSCEEEEEEEEEEC
T ss_pred             CcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEE--EEEEecCceEEEEcccCCCCeEEEEEEEeEC
Confidence            3457777774 88999988776532 23488999999977543 221  1244556789999999999999999999965


Q ss_pred             ----CccCcce--eeEEec
Q 005110          401 ----TTELGRC--EIWFST  413 (714)
Q Consensus       401 ----~~elg~~--E~k~~T  413 (714)
                          .|..|.|  ++.+.|
T Consensus       203 ~~~~~g~wS~WS~~~~~~t  221 (227)
T 1eer_B          203 EPSFGGFWSEWSEPVSLLT  221 (227)
T ss_dssp             TTTCCEECCCCCCCEEEEC
T ss_pred             CCCCCCcCCCCCCCEEEEC
Confidence                2444554  445555

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=96.13  E-value=0.025  Score=54.49  Aligned_cols=89  Identities=11%  Similarity=0.067  Sum_probs=59.9

Q ss_pred             CCcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCc-eeeecCCceeEeecCCcceeeeEEEEe
Q 005110          319 SNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPT-CTLFAPNTRFVVTGLCPATEYQFKVVS  397 (714)
Q Consensus       319 ~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept-~~~~~p~~r~~vs~L~P~TEY~fkvvs  397 (714)
                      +..+++..|.+. -...+|.|.+...    ..+..|.|=||+....  .+-. -++....+++.|.+|.|.|+|+|+|-+
T Consensus       107 ~t~i~PP~v~v~-~~~~~i~V~~~~p----~~~l~Y~v~y~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Ycv~Vra  179 (206)
T 4doh_B          107 STILTRPGMEIT-KDGFHLVIELEDL----GPQFEFLVAYWRREPG--AEEHVKMVRSGGIPVHLETMEPGAAYCVKAQT  179 (206)
T ss_dssp             GCBCCCCCEEEE-EETTEEEEEECCC----CTTCEEEEEEEESSSS--CCCEEEEECCSSSEEEEEECCSSSCEEEEEEE
T ss_pred             hcccCCCeEEEE-eCCCEEEEEecCC----CCcEEEEEEEEEcCCC--ceeEEeEEccCCeEEEEeCCCCCCcEEEEEEE
Confidence            344555567776 5788999888743    4678999999887543  1111 223334678999999999999999999


Q ss_pred             ccCC-ccCc-ceeeEEecC
Q 005110          398 SNGT-TELG-RCEIWFSTG  414 (714)
Q Consensus       398 F~~~-~elg-~~E~k~~T~  414 (714)
                      ++.. ...| .++..|++-
T Consensus       180 ~~~~~~~~g~~S~~~C~~t  198 (206)
T 4doh_B          180 FVKAIGRYSAFSQTECVEV  198 (206)
T ss_dssp             EEGGGTEECCCCCCEEECC
T ss_pred             EecCCCCCCCCCCCEeEEc
Confidence            9853 1223 245566543

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*

Probab=95.91  E-value=0.028  Score=58.46  Aligned_cols=71  Identities=20%  Similarity=0.269  Sum_probs=52.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCC-------CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEE
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPS-------PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVV  396 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s-------~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvv  396 (714)
                      +..|+++.. .+||+|.+. ....       ...+.||+|-||+....  .+  ..+...++++.|.||.|.|+|+|||.
T Consensus       108 pP~v~~~~~-~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~--~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~  181 (414)
T 3se4_A          108 PPEVHLEAE-DKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSG--VE--ERIENIYSRHKIYKLSPETTYCLKVK  181 (414)
T ss_dssp             CCEEEEEEC-SSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTC--CE--EEEEEECSEEEECCCCTTCEEEEEEE
T ss_pred             CCeEEEEEc-CCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCC--ce--EEEecCCcEEEEcCCCCCCeEEEEEE
Confidence            335787654 579999888 4321       13578999999987653  11  22455788999999999999999999


Q ss_pred             eccC
Q 005110          397 SSNG  400 (714)
Q Consensus       397 sF~~  400 (714)
                      +|+.
T Consensus       182 A~n~  185 (414)
T 3se4_A          182 AALL  185 (414)
T ss_dssp             EECT
T ss_pred             EEec
Confidence            9995

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A

Probab=95.91  E-value=0.032  Score=55.48  Aligned_cols=77  Identities=21%  Similarity=0.257  Sum_probs=57.7

Q ss_pred             eEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          326 MVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      .+++.+++.++++|.+..... ....|.+|.+++++.... +.   ..........+.|.+|.|.+.|.|+|.+++..|.
T Consensus       201 ~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~---~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~  277 (389)
T 2jll_A          201 GVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWK---IVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQ  277 (389)
T ss_dssp             EEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCE---EEECSTTCSEEEECSCCTTCEEEEEEEEEESSCB
T ss_pred             ceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccE---EeeccCCcceEEECCccCCCEEEEEEEEEcCCcc
Confidence            678889999999998875433 344688999998887654 32   1112234578999999999999999999998775


Q ss_pred             Cc
Q 005110          404 LG  405 (714)
Q Consensus       404 lg  405 (714)
                      -.
T Consensus       278 ~~  279 (389)
T 2jll_A          278 GD  279 (389)
T ss_dssp             CC
T ss_pred             CC
Confidence            33

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}

Probab=95.59  E-value=0.027  Score=52.00  Aligned_cols=84  Identities=17%  Similarity=0.160  Sum_probs=54.6

Q ss_pred             EeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceee-ecCCceeEeecCCcceeeeEEEEeccCCccCcce
Q 005110          331 DVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTL-FAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRC  407 (714)
Q Consensus       331 ~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~-~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg~~  407 (714)
                      .....+++|.+..... ....|.+|.+.+++.... +.....-+. ......+.|.+|.|.+.|.||+.+.|..|.=-.+
T Consensus       123 ~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S  202 (215)
T 3mtr_A          123 EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEIS  202 (215)
T ss_dssp             EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCC
T ss_pred             EEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcc
Confidence            4667788888765442 345789999999988664 221100000 1122789999999999999999999887643322


Q ss_pred             -eeEEecC
Q 005110          408 -EIWFSTG  414 (714)
Q Consensus       408 -E~k~~T~  414 (714)
                       ...+.|.
T Consensus       203 ~~~~v~T~  210 (215)
T 3mtr_A          203 AASEFKTQ  210 (215)
T ss_dssp             CCEEEECC
T ss_pred             cceeeEec
Confidence             2344443

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}

Probab=95.49  E-value=0.0084  Score=65.83  Aligned_cols=76  Identities=20%  Similarity=0.213  Sum_probs=55.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeec-CCcee--EeecCCcceeeeEEEEecc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFA-PNTRF--VVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~-p~~r~--~vs~L~P~TEY~fkvvsF~  399 (714)
                      ++..++.+.+++++|+|-.+........+.+|.|-||......-. -...+.. ..+++  .|.+|.|.|+|.|||-+++
T Consensus       389 PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~-~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~  467 (488)
T 2q7n_A          389 DPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEV-RNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS  467 (488)
T ss_dssp             CCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEE-EEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE
T ss_pred             CCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCce-EEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE
Confidence            344688999999999999887754456789999999987542100 0112221 24567  9999999999999999999

>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}

Probab=95.16  E-value=0.1  Score=45.66  Aligned_cols=85  Identities=13%  Similarity=0.124  Sum_probs=54.9

Q ss_pred             ceEEEEEe-eceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceee-ecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          325 NMVKFEDV-RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTL-FAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       325 ~~~rFE~v-t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~-~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      .-+..... ..++|+|-+...    .++.||.|........ |.    .+- ....+.|..++|.|.|.|.|+|.+++..
T Consensus         9 ~~l~a~~~~~~~~v~LsW~~~----~~~~~Y~VyR~~~~~~~~~----~i~~~~~~tsy~d~~l~~g~~Y~Y~V~Avn~~   80 (103)
T 3mpc_A            9 TGLSAVLDSSGNTANLTWNAA----PGANSYNVKRSTKSGGPYT----TIATNITSTNYTDTGVATGTKYYYVVSAVSNG   80 (103)
T ss_dssp             EEEEEEECTTSCCEEEEEECC----TTCSEEEEEEESSTTCCCE----EEEEEECSSEEEETTCCTTCCCEEEEEEEETT
T ss_pred             ceeEEEEeCCCCEEEEEEECC----CCCCEEEEEEecCCCCCcE----EEeecCCCCEEEECCCCCCCEEEEEEEEEeCc
Confidence            34666665 357888877663    3589999954433232 32    122 2467899999999999999999999955


Q ss_pred             ccCcc-eeeEEecCccc
Q 005110          402 TELGR-CEIWFSTGSSR  417 (714)
Q Consensus       402 ~elg~-~E~k~~T~s~e  417 (714)
                      ++=.. -|+...|..++
T Consensus        81 geS~~S~~vs~~~~~~~   97 (103)
T 3mpc_A           81 VETLNSAEAILQYPKLE   97 (103)
T ss_dssp             EECCCCCCEECBCCCCC
T ss_pred             CCcCCCccEEEECCccc
Confidence            44332 24444444443

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A

Probab=95.07  E-value=0.047  Score=56.90  Aligned_cols=78  Identities=15%  Similarity=0.125  Sum_probs=49.9

Q ss_pred             EEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc-cC
Q 005110          327 VKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT-EL  404 (714)
Q Consensus       327 ~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~-el  404 (714)
                      +.+.. +.+++.|-...... ....+.+|.|=||+........+...+. +++.+.|.+|.|.|.|.|+|-+.+..| ..
T Consensus       327 l~v~~-~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~w~~~~~~~~~-~~~~~~l~~L~p~t~Y~~qVRa~~~~g~~~  404 (419)
T 2gys_A          327 LQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQ-NAHSMALPALEPSTRYWARVRVRTSRTGYN  404 (419)
T ss_dssp             EEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEEEE-SCSEEECCCCCSSCCCEEEEEEEECCTTCC
T ss_pred             eEEEE-eCCeEEEEECCCcccccccceEEEEEEEcCCCCcceeeccccc-cccEEEeccCCCCCeEEEEEEEEEcCCCCC
Confidence            44433 46788887766542 2236889999999875432222233333 789999999999999999999998863 34


Q ss_pred             cc
Q 005110          405 GR  406 (714)
Q Consensus       405 g~  406 (714)
                      |.
T Consensus       405 G~  406 (419)
T 2gys_A          405 GI  406 (419)
T ss_dssp             BC
T ss_pred             Cc
Confidence            53

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}

Probab=95.01  E-value=0.03  Score=53.74  Aligned_cols=79  Identities=23%  Similarity=0.245  Sum_probs=57.2

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ..+++.++++++++|....... -...|.+|.+-++..... +..    .-......+.|.+|.|.++|.||+.+++..|
T Consensus       203 ~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~----~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G  278 (305)
T 2nzi_A          203 RGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLR----VGQARETRYTVINLFGKTSYQFRVIAENKFG  278 (305)
T ss_dssp             EEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEE----EEEESSSEEEECSCCSSCEEEEEEEEEETTE
T ss_pred             CCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEE----CccccCceEEecCCCCCCeEEEEEEEEeCCc
Confidence            3577888999999998876432 334689999988776443 211    1122378899999999999999999998876


Q ss_pred             cCcce
Q 005110          403 ELGRC  407 (714)
Q Consensus       403 elg~~  407 (714)
                      .-..+
T Consensus       279 ~~~~S  283 (305)
T 2nzi_A          279 LSKPS  283 (305)
T ss_dssp             ECCCC
T ss_pred             ccCCc
Confidence            44333

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*

Probab=94.99  E-value=0.015  Score=60.49  Aligned_cols=79  Identities=14%  Similarity=0.241  Sum_probs=47.3

Q ss_pred             CCcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceee-ecCCceeEeecCCcceeeeEEEE
Q 005110          319 SNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTL-FAPNTRFVVTGLCPATEYQFKVV  396 (714)
Q Consensus       319 ~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~-~~p~~r~~vs~L~P~TEY~fkvv  396 (714)
                      ..|+++--|+++.+. ++++|-.+.......+|. |.+.|+..... ....+.|.- ......|.+.+|.|.+.|.|||.
T Consensus         6 ~~l~~P~nv~~~~~~-~~~~L~W~p~~~~~~~i~-Y~V~y~~~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~   83 (414)
T 3se4_A            6 KNLKSPQKVEVDIID-DNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR   83 (414)
T ss_dssp             -----CCCCCEEEET-TEEEEC----------CE-EEEEEEESSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEE
T ss_pred             CCCCCCceeEEEEEC-CceEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEE
Confidence            356777788898875 556554544433345688 99999986443 333345553 34556677788999999999999


Q ss_pred             ecc
Q 005110          397 SSN  399 (714)
Q Consensus       397 sF~  399 (714)
                      +++
T Consensus        84 A~n   86 (414)
T 3se4_A           84 AEK   86 (414)
T ss_dssp             EEE
T ss_pred             Eee
Confidence            999

>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=94.88  E-value=0.011  Score=57.26  Aligned_cols=57  Identities=21%  Similarity=0.186  Sum_probs=31.7

Q ss_pred             CcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCcceee
Q 005110          350 NIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEI  409 (714)
Q Consensus       350 ~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg~~E~  409 (714)
                      .|++|.|.++.....   .-........+.|.|+||.|.|+|.|||.+++..|.-..++.
T Consensus        21 ~Vt~Y~~~~~~~~~~---~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~   77 (232)
T 4go6_B           21 MVTHYFLPPDDAVPS---DDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEI   77 (232)
T ss_dssp             EECEEECCCC---------------------CEEECCTTCEEEEEEEEEETTEEEEECCC
T ss_pred             EEEEEEEEeeCCCCC---cEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccc
Confidence            477888876544332   112223445678999999999999999999998875444443

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A

Probab=94.87  E-value=0.11  Score=48.21  Aligned_cols=76  Identities=13%  Similarity=0.021  Sum_probs=51.1

Q ss_pred             EEEEEe-eceeEEEEeCcCCCCCCCcceEEEEeeecCCC--CCCCC--ceee--ecCCceeEeecCCcceeeeEEEEecc
Q 005110          327 VKFEDV-RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG--FPARP--TCTL--FAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       327 ~rFE~v-t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~--y~~ep--t~~~--~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      ++.+.. +.++|++-...... .....+|.|+||+....  +..+.  .|..  -.-..+|.+.+|.|.+.|.|+|.+++
T Consensus        11 l~c~~~~~~~~~~~~W~p~~~-~~~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~~~V~A~N   89 (215)
T 1cd9_B           11 LSCLMHLTTNSLVCQWEPGPE-THLPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYMAIWVQAEN   89 (215)
T ss_dssp             EEEEEETTTTEEEEEEECCSC-CSSCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCEEEEEEEEE
T ss_pred             eeeecCCCcccEEEEecCCCC-CCCceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceEEEEEEEEEC
Confidence            555544 68899998886543 22356899999987543  11111  1111  11234788899999999999999999


Q ss_pred             CCcc
Q 005110          400 GTTE  403 (714)
Q Consensus       400 ~~~e  403 (714)
                      ..|.
T Consensus        90 ~~G~   93 (215)
T 1cd9_B           90 MLGS   93 (215)
T ss_dssp             TTEE
T ss_pred             CCCC
Confidence            8875

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=94.71  E-value=0.18  Score=49.15  Aligned_cols=85  Identities=21%  Similarity=0.197  Sum_probs=57.1

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCC---CCC----------cceEEEEeeecCCCCCCCCceeeecCCceeEeecCCccee
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPS---PGN----------IISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATE  390 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s---~~~----------i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TE  390 (714)
                      +..|.++ ....+|.|.+......   .++          ...|.|=||+......   . .....+..+.|.+|.|.|+
T Consensus       111 PP~v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~---~-~~~~~~~~~~l~~L~p~t~  185 (221)
T 4doh_R          111 PPEVALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRT---W-SQCVTNHTLVLTWLEPNTL  185 (221)
T ss_dssp             CCEEEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEE---E-EEEECSSEEEECSCCTTCE
T ss_pred             CCEEEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcE---E-EEeecCcEEEEecCCCCCc
Confidence            3458777 6888999988765421   111          3589999998755411   1 1223567899999999999


Q ss_pred             eeEEEEeccCC-ccCcc-eeeEEec
Q 005110          391 YQFKVVSSNGT-TELGR-CEIWFST  413 (714)
Q Consensus       391 Y~fkvvsF~~~-~elg~-~E~k~~T  413 (714)
                      |+|+|-+++.. ...|. ++..|++
T Consensus       186 Ycv~V~a~~~~~~~~g~~S~~~c~~  210 (221)
T 4doh_R          186 YCVHVESFVPGPPRRAQPSEKQCAR  210 (221)
T ss_dssp             EEEEEEEECSSSCCCCCCCEEEEEE
T ss_pred             EEEEEEEEEcCCCCCCCCCCCEeEe
Confidence            99999999752 23443 4556654

>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A

Probab=94.38  E-value=0.085  Score=51.48  Aligned_cols=76  Identities=18%  Similarity=0.191  Sum_probs=54.5

Q ss_pred             EEEEeece----eEEEEeCcCCCC----CCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          328 KFEDVRAT----SLTVVLGSEDPS----PGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       328 rFE~vt~t----Sv~vvL~~~~~s----~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      +++.++.+    +|+|-.+.....    ...+..|.|-||..... +..    +....++++.|.+|.|+|+|.|+|=+.
T Consensus       140 ~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~----~~~~~~~~~~l~~L~p~t~Y~vqVRa~  215 (236)
T 1axi_B          140 TLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKM----MDPILTTSVPVYSLKVDKEYEVRVRSK  215 (236)
T ss_dssp             EECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEE----CCCBSSSEEEEEEEETTSCEEEEEEEE
T ss_pred             EEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEE----EeccCCCEEEEeccCCCCEEEEEEEEE
Confidence            56677554    488888776532    11478999999998654 321    223457899999999999999999998


Q ss_pred             cCCc-cCcce
Q 005110          399 NGTT-ELGRC  407 (714)
Q Consensus       399 ~~~~-elg~~  407 (714)
                      +..| .+|.|
T Consensus       216 ~~~gg~ws~W  225 (236)
T 1axi_B          216 QRNSGNYGEF  225 (236)
T ss_dssp             ETTSSCCCCC
T ss_pred             ECCCCCcCCC
Confidence            8764 45554

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}

Probab=93.83  E-value=0.15  Score=48.23  Aligned_cols=71  Identities=13%  Similarity=-0.004  Sum_probs=43.7

Q ss_pred             EEEEEe-eceeEEEEeCcCCCCCCCcceEEEEeeecCC-C-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          327 VKFEDV-RATSLTVVLGSEDPSPGNIISYTLWHRRAHE-G-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       327 ~rFE~v-t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~-~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      +.++.+ .+++|.|-...... ...+..|.|=||.... . +..  .-+......++.|.+|.|+|+|.|+|-+-+.
T Consensus       116 l~v~~~~~~~~l~l~W~~P~~-~~~~l~yev~y~~~~~~~~w~~--~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~  189 (206)
T 3v6o_A          116 VKAEITINIGLLKISWEKPVF-PENNLQFQIRYGLSGKEVQWKM--YEVYDAKSKSVSLPVPDLCAVYAVQVRCKRL  189 (206)
T ss_dssp             CEEEEETTTTEEEEEC---------CEEEEEEEEESSSSCCCEE--EEECC---CEEEECCSCTTSCEEEEEEEEET
T ss_pred             eEeEEecCCCeEEEEECCCCC-CCCcEEEEEEEEECCCCCceEE--EecccCcceeEEeecCCCCCEEEEEEEEecC
Confidence            555544 58899988876543 3356899999998753 1 211  1011223357999999999999999998774

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}

Probab=93.53  E-value=0.081  Score=53.32  Aligned_cols=84  Identities=12%  Similarity=0.203  Sum_probs=44.9

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceee-ecCCceeEeecCCcceeeeEEEEe
Q 005110          320 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTL-FAPNTRFVVTGLCPATEYQFKVVS  397 (714)
Q Consensus       320 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~-~~p~~r~~vs~L~P~TEY~fkvvs  397 (714)
                      .|+++--|++..+ .++++|-.+.......+|. |.+-|+..... ...-+.|.- ...+-.|...+|.|.+.|.|||.+
T Consensus         3 ~l~~P~nv~~~~~-n~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~A   80 (306)
T 3s98_A            3 PLKSPQKVEVDII-DDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRA   80 (306)
T ss_dssp             -----CCCEEEEE-TTEEEEECC--------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEEE
T ss_pred             CCCCCcEeEEEEE-CCeEEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEEE
Confidence            3566777888866 4556565655543346676 99999986543 332344432 222223444567899999999999


Q ss_pred             ccCCccCcce
Q 005110          398 SNGTTELGRC  407 (714)
Q Consensus       398 F~~~~elg~~  407 (714)
                      ++  +..|.|
T Consensus        81 ~n--~~~S~~   88 (306)
T 3s98_A           81 EK--ENTSSW   88 (306)
T ss_dssp             EC--SSCEEE
T ss_pred             Ee--CCcCCC
Confidence            99  446654

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}

Probab=93.38  E-value=0.28  Score=46.53  Aligned_cols=86  Identities=17%  Similarity=0.145  Sum_probs=62.1

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      ||++--|+|+-+.. ++++-.+......+++. |.+-|+.-+ .+.  |.|.-. ..++..|++|.|-+.|.|||.++++
T Consensus         2 lp~P~nv~~~s~n~-~~iL~W~pp~~~~~~v~-Y~V~y~~~~-~w~--~~c~~~-~~~~c~lt~l~~~~~Y~~rV~A~~~   75 (201)
T 3lqm_A            2 VPPPENVRMNSVNF-KNILQWESPAFAKGQLT-FTAQYLSYR-IFQ--DKCMQT-TLTECDFSSLSKYGDHTLRVRAEFA   75 (201)
T ss_dssp             CCCCEEEEEEEETT-EEEEEEECCCCSSSCCE-EEEEEEETT-EEE--EEEEEE-SSSEEECTTSCSSSCEEEEEEEEET
T ss_pred             CCCCcccEEEEECC-ceEEEECCCCCCCCCeE-EEEEEEECC-Ccc--cCcCcc-CCCEEECCCCccCCCEEEEEEEecC
Confidence            56777888886665 45566666654555776 999998752 233  455543 5789999999999999999999998


Q ss_pred             CccCcceeeEEe
Q 005110          401 TTELGRCEIWFS  412 (714)
Q Consensus       401 ~~elg~~E~k~~  412 (714)
                      .+.-.-.|.+|.
T Consensus        76 ~~~S~~s~~~f~   87 (201)
T 3lqm_A           76 DEHSDWVQITFS   87 (201)
T ss_dssp             TEECCCEEEEEC
T ss_pred             CCcCcceeeeee
Confidence            865444565543

>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A

Probab=93.21  E-value=0.045  Score=53.66  Aligned_cols=107  Identities=19%  Similarity=0.407  Sum_probs=62.6

Q ss_pred             eeeeeccccC-CCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccC-CCcc---CcceeEEeccCCCccchhHH
Q 005110          141 SCCICRKYDD-NKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKD-RCYS---GLDGSFYCISCRKVNDLLGC  215 (714)
Q Consensus       141 sC~IC~kfD~-nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~-g~~~---~lD~~f~C~~Cgk~sdLlg~  215 (714)
                      .|.||.+-.+ +....-||.|+        .|..|-|..|.      |+-.. ....   .-+..|+|..|-....-.  
T Consensus         4 ~CpiC~k~Y~~~~~~~~MIqCd--------~C~~W~H~~Cv------gi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~~--   67 (183)
T 3lqh_A            4 FCPLCDKCYDDDDYESKMMQCG--------KCDRWVHSKCE------NLSDEMYEILSNLPESVAYTCVNCTERHPAE--   67 (183)
T ss_dssp             BCTTTCCBCTTCCTTCCEEECT--------TTCCEEEGGGS------SCCHHHHHHHHHSHHHHCCCCTTTCCSSSCH--
T ss_pred             cCCCCcCccCCcccCCCeEECC--------CCCcccchhcc------ccCHHHHHHhhcCCCCCeeECcCCCCCCCHH--
Confidence            4889977544 43478899999        99999999997      22110 0000   012489999998887753  


Q ss_pred             HHHHHHHhhccccchhhhhhhh---------------------chhhhccccHHHHHHHHHHHHHHHHhhhc
Q 005110          216 WKKQLVVAKNTRRVDILCYRLS---------------------LGQKLVNATEKYKNLSKIVDDAVKMLEDE  266 (714)
Q Consensus       216 w~Kql~~ake~rrvD~Lc~rL~---------------------l~~kll~GS~~~k~L~~~ve~A~~KLe~e  266 (714)
                      |++-|. .+..+.+..|...|.                     +..||=.|  +|+.+.++++++...+.+-
T Consensus        68 ~~~~~~-~el~~~l~~vl~~L~~~~~s~~~~~y~~k~PmDL~~i~kKl~~~--~Y~s~~eF~~Dv~lIf~n~  136 (183)
T 3lqh_A           68 WRLALE-KELQISLKQVLTALLNSRTTSHLLRYRQQQPLDLEGVKRKMDQG--NYTSVLEFSDDIVKIIQAA  136 (183)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHTCHHHHHHHTCCC--CCSHHHHHHHHHTT--CCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHhccccHhhhhhhhcCCccHHHHHHHHhcC--CCCCHHHHHHHHHHHHHHH
Confidence            665432 121111222212111                     11112122  4888888888888888873

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A

Probab=93.10  E-value=0.18  Score=46.94  Aligned_cols=78  Identities=15%  Similarity=0.068  Sum_probs=52.3

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCcee-eecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCT-LFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~-~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      -|+...+..++|++-....... ...++|.|.||..... ...-|.++ .....-+|.+.+|.|-++|.|+|.+.+..|.
T Consensus         9 nl~c~~~~~~~~~c~W~p~~~~-~~~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~V~A~N~~G~   87 (210)
T 3n06_B            9 IFKCRSPNKETFTCWWRPGTDG-GLPTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMVNATNQMGS   87 (210)
T ss_dssp             EEEEEBSSSSCEEEEEECCSSS-CCCSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEEEEEEETTEE
T ss_pred             EeEEEeCCCCeEEEEECCCCCC-CCCceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEEEEEEcCCCC
Confidence            4777888899999988765422 2257999999986532 10001100 0112345667889999999999999988775


Q ss_pred             C
Q 005110          404 L  404 (714)
Q Consensus       404 l  404 (714)
                      -
T Consensus        88 ~   88 (210)
T 3n06_B           88 S   88 (210)
T ss_dssp             E
T ss_pred             e
Confidence            4

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1

Probab=92.93  E-value=0.54  Score=46.41  Aligned_cols=77  Identities=12%  Similarity=0.019  Sum_probs=50.1

Q ss_pred             eEEEEEe-eceeEEEEeCcCCCCCCCcceEEEEeeecCCC--CCCCC--ceeeecCCceeEe--ecCCcceeeeEEEEec
Q 005110          326 MVKFEDV-RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG--FPARP--TCTLFAPNTRFVV--TGLCPATEYQFKVVSS  398 (714)
Q Consensus       326 ~~rFE~v-t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~--y~~ep--t~~~~~p~~r~~v--s~L~P~TEY~fkvvsF  398 (714)
                      .+..+.. +++++++-....... ....+|.|+||.....  +....  .|......+...|  .+|.|.+.|.|+|.++
T Consensus       104 ~l~c~~~~~~~~~~~~W~~~~~~-~~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~  182 (313)
T 2d9q_B          104 NLSCLMNLTTSSLICQWEPGPET-HLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAE  182 (313)
T ss_dssp             EEEEEEETTTTEEEEEEECCSCC-SSCCEEEEEEEECCTTSCSCCCCEEEECCCTTCSEEEEEGGGCCSSSCEEEEEEEE
T ss_pred             cceeeECCCCccEEEEecCCCCC-CCceeEEEEEEecCCCcccCCcccccCCCCCCCcEEEECccccccceeEEEEEEEE
Confidence            4555666 578999988765432 2246799999987643  21111  1111122334444  5699999999999999


Q ss_pred             cCCcc
Q 005110          399 NGTTE  403 (714)
Q Consensus       399 ~~~~e  403 (714)
                      +..|.
T Consensus       183 N~~G~  187 (313)
T 2d9q_B          183 NALGT  187 (313)
T ss_dssp             ETTEE
T ss_pred             CCCCC
Confidence            98876

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}

Probab=92.76  E-value=0.048  Score=52.89  Aligned_cols=72  Identities=13%  Similarity=0.142  Sum_probs=33.9

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCC-----CC-----C--cceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeee
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPS-----PG-----N--IISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQ  392 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s-----~~-----~--i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~  392 (714)
                      ..|.++... .||.|.+......     .+     +  ...|+|.||+....  . -..++...++.+.|.||.|.|+|+
T Consensus       111 P~v~v~~~~-~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~--~-~~~~~~~~~~~~~i~~L~p~t~Yc  186 (211)
T 3g9v_A          111 PVMNITQVN-GSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLE--K-EQKVYEGAHRAVEIEALTPHSSYC  186 (211)
T ss_dssp             CEEECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC---------CEEEEEESSCCCC----------C
T ss_pred             CEEEEEEcC-CEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCc--c-EEEEEecCCcEEEEecCCCCCeEE
Confidence            357666554 4788877666531     11     1  35699999986442  1 122444678899999999999999


Q ss_pred             EEEEeccC
Q 005110          393 FKVVSSNG  400 (714)
Q Consensus       393 fkvvsF~~  400 (714)
                      |+|-+|..
T Consensus       187 v~V~a~~~  194 (211)
T 3g9v_A          187 VVAEIYQP  194 (211)
T ss_dssp             EEEEEEET
T ss_pred             EEEEEEeC
Confidence            99999864

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}

Probab=92.71  E-value=0.081  Score=58.31  Aligned_cols=81  Identities=14%  Similarity=0.148  Sum_probs=56.0

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeec---CCceeEeecCCcceeeeEEEEeccC
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFA---PNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~---p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      +..++++.+++++|.|-..........+.+|.|=||........ -+..+..   ....+.|.+|.|.|+|.|||-++ .
T Consensus       385 P~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~-~~vsv~~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~  462 (483)
T 3e0g_A          385 PTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQ-RNVTIQGVENSSYLVALDKLNPYTLYTFRIRCS-T  462 (483)
T ss_dssp             CEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCE-EECCCBCCSSSBCCCCCCSCCSSSSCEEEEECC-C
T ss_pred             CeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCce-EEEEEeccCCceeEEEEeccCCCcEEEEEEEEe-e
Confidence            34578888899999999887754455678999999987653100 0111211   12257899999999999999999 4


Q ss_pred             CccCcce
Q 005110          401 TTELGRC  407 (714)
Q Consensus       401 ~~elg~~  407 (714)
                      . .+|.|
T Consensus       463 ~-g~g~W  468 (483)
T 3e0g_A          463 E-TFWKW  468 (483)
T ss_dssp             S-SCCCC
T ss_pred             C-CCCCc
Confidence            3 34433

>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*

Probab=91.42  E-value=0.063  Score=44.69  Aligned_cols=46  Identities=30%  Similarity=0.640  Sum_probs=33.3

Q ss_pred             eeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccCcceeEEeccCC
Q 005110          142 CCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCR  207 (714)
Q Consensus       142 C~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cg  207 (714)
                      |.+|.+.++   +..||.||        .|..|-|+.|.      |+...   ...++.|+|..|-
T Consensus        21 C~~C~~~~~---~~~mi~CD--------~C~~wfH~~Cv------~~~~~---~~~~~~w~C~~C~   66 (75)
T 2k16_A           21 CPGCNKPDD---GSPMIGCD--------DCDDWYHWPCV------GIMAA---PPEEMQWFCPKCA   66 (75)
T ss_dssp             BTTTTBCCS---SCCEEECS--------SSSSEEEHHHH------TCSSC---CCSSSCCCCTTTH
T ss_pred             CCCCCCCCC---CCCEEEcC--------CCCcccccccC------CCCcc---CCCCCCEEChhcc
Confidence            557877763   56899999        89999999995      22211   1125789999994

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}

Probab=90.24  E-value=0.61  Score=45.14  Aligned_cols=92  Identities=11%  Similarity=0.022  Sum_probs=60.3

Q ss_pred             CCcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeec--CCcceeeeEEE
Q 005110          319 SNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTG--LCPATEYQFKV  395 (714)
Q Consensus       319 ~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~--L~P~TEY~fkv  395 (714)
                      ..|+++.-|+|+-+.... ++-.+....+..++..|.+.|+..... +...|.|.-.. .+..-|++  |.|-+.|.|||
T Consensus         6 ~~lp~P~nv~~~s~n~~~-iL~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~i~-~~~Cdlt~~~~~~~~~Y~~RV   83 (211)
T 3g9v_A            6 HESLKPQRVQFQSRNFHN-ILQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQ-ELSCDLTSETSDIQEPYYGRV   83 (211)
T ss_dssp             ---CCCEEEEEEEETTEE-EEEEECCCC---CCCEEEEEEEETTCSSCEEEEEEEEEC-CSEEECTGGGCSTTSCEEEEE
T ss_pred             ccCCCCceeEEEEEcCce-EEEECCCCCCCCCCeEEEEEEEECCCCceEECccCCCCC-CCEECCCCcccccCccEEEEE
Confidence            357788899997666655 477777665556689999999876543 44445665543 45666664  47999999999


Q ss_pred             EeccCCccCcceeeEEe
Q 005110          396 VSSNGTTELGRCEIWFS  412 (714)
Q Consensus       396 vsF~~~~elg~~E~k~~  412 (714)
                      .++++.+.-...|..-|
T Consensus        84 ~A~~~~~~S~ws~~~~f  100 (211)
T 3g9v_A           84 RAASAGSYSEWSMTPRF  100 (211)
T ss_dssp             EEEETTEECCCEECCCB
T ss_pred             EEECCCCcCCCEecCcc
Confidence            99997665444455433

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*

Probab=89.75  E-value=1.7  Score=40.86  Aligned_cols=71  Identities=10%  Similarity=0.134  Sum_probs=52.2

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      ..+.++.+....|.|-.+...  ......|.|=||..... ..    -+.+...+++.|.+|.|.|+|.|+|=+=...
T Consensus       103 ~~l~~~~~~~~~l~l~W~~p~--~~~~l~yev~y~~~~~~~w~----~~~~~~~~~~~l~~l~p~~~Y~vqVR~~~~~  174 (199)
T 2b5i_C          103 ENLTLHKLSESQLELNWNNRF--LNHCLEHLVQYRTDWDHSWT----EQSVDYRHKFSLPSVDGQKRYTFRVRSRFNP  174 (199)
T ss_dssp             EEEEEEEEETTEEEEEEECSS--CSTTCEEEEEEEETTCSSCE----EEEECSSCEEEECSCCTTSCEEEEEEEECCS
T ss_pred             cEEEEEECCCCCEEEEECCCC--CCCceEEEEEEeecCCcccE----EEeccCceEEEecCCCCCcEEEEEEEEeccC
Confidence            357888877778888877764  23445899999986553 21    1334456899999999999999999886643

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A

Probab=89.41  E-value=1.2  Score=46.42  Aligned_cols=73  Identities=10%  Similarity=0.173  Sum_probs=48.3

Q ss_pred             eEEEEEeeceeEEEEeCcCCCC------CCCcceEEEEeeecCCCCCCCCceeeecCCceeEee--cCCcceeeeEEEEe
Q 005110          326 MVKFEDVRATSLTVVLGSEDPS------PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT--GLCPATEYQFKVVS  397 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s------~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs--~L~P~TEY~fkvvs  397 (714)
                      -+.++... .+|.|-.....+.      ......|.|.||...+.+....+  +....+.+.+.  +|.|.|+|.|||.+
T Consensus       114 ~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~~~w~~~~~--~~~~~~~~~~~~~~L~p~~~Y~~rVra  190 (419)
T 2gys_A          114 DLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAI--LLSNTSQATLGPEHLMPSSTYVARVRT  190 (419)
T ss_dssp             EEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEE--EEESSSEEEECTTTCCTTCEEEEEEEE
T ss_pred             ceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCCCChhheee--ecccceEEEechhhcCCCCeEEEEEEE
Confidence            55666655 5777766665431      13468899999998633433322  33334555555  99999999999999


Q ss_pred             ccCC
Q 005110          398 SNGT  401 (714)
Q Consensus       398 F~~~  401 (714)
                      -+..
T Consensus       191 ~~~~  194 (419)
T 2gys_A          191 RLAP  194 (419)
T ss_dssp             EECT
T ss_pred             ecCC
Confidence            9864

>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2

Probab=87.79  E-value=0.12  Score=41.83  Aligned_cols=48  Identities=23%  Similarity=0.529  Sum_probs=32.5

Q ss_pred             eeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccCcceeEEeccCCCc
Q 005110          144 ICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKV  209 (714)
Q Consensus       144 IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk~  209 (714)
                      +|.+-+++  .-.||.|+        .|..|-|+.|+      |+...  ....-..|+|..|-.+
T Consensus        11 ~C~~~~~~--~~~mI~Cd--------~C~~WfH~~Cv------gl~~~--~~~~~~~~~C~~C~~k   58 (64)
T 1we9_A           11 ACGESYAA--DEFWICCD--------LCEMWFHGKCV------KITPA--RAEHIKQYKCPSCSNK   58 (64)
T ss_dssp             SSCCCCCS--SSCEEECS--------SSCCEEETTTT------TCCTT--GGGGCSSCCCHHHHTT
T ss_pred             CCCCccCC--CCCEEEcc--------CCCCCCCcccc------CcChh--HhcCCCcEECCCCcCc
Confidence            78776432  35899999        99999999997      33211  1112258999999543

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*

Probab=87.64  E-value=0.32  Score=50.74  Aligned_cols=70  Identities=11%  Similarity=0.107  Sum_probs=30.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeec-CCcceeeeEEEEecc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTG-LCPATEYQFKVVSSN  399 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~-L~P~TEY~fkvvsF~  399 (714)
                      +..++++.++++++.|-....... ...+.+|.|=||+....+....      ..+++.|.+ |.|.|.|.|||-+-.
T Consensus       241 P~~l~v~~~~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~w~~~~------~~~~~~l~~~L~p~t~Y~~qVRa~~  312 (380)
T 3lb6_C          241 PVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTAT------VENETYTLKTTNETRQLCFVVRSKV  312 (380)
T ss_dssp             CEEEEEC-------CEEEECCSSSCCSTTEEEEECC--------CCE------ESSSCC------------CCEEEEE
T ss_pred             CceEEEEEcCCCeEEEEECCCCCCCCcceEEEEEEEEeCCCCceEec------ccceEEEeCccCCCcEEEEEEEEEE
Confidence            346788888889999988876542 4578999999998532232211      134688999 999999999998864

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1

Probab=86.88  E-value=2.1  Score=42.35  Aligned_cols=71  Identities=10%  Similarity=0.134  Sum_probs=52.6

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      ..+.++.+....|.|-.+...+  .....|.|=||..... ..    .+.+...++|.|.+|.|.|+|.|||=+=...
T Consensus       141 ~nl~v~~~~~~~l~l~W~~P~~--~~~L~Yevry~~~~~~~W~----~~~~~~~~~~~l~~L~p~~~Y~vqVR~k~~~  212 (247)
T 2erj_C          141 ENLTLHKLSESQLELNWNNRFL--NHCLEHLVQYRTDWDHSWT----EQSVDYRHKFSLPSVDGQKRYTFRVRSRFNP  212 (247)
T ss_dssp             EEEEEEESSSSCEEEEEECSSC--CTTEEEEEEEECSSCSSCE----EEEECSSCEEEESCCCTTSCEEEEEEEEECS
T ss_pred             CeEEEEECCCCcEEEEECCCCC--CCcEEEEEEEeeCCCCCCE----EEecCCceEEEecCCCCCCEEEEEEEEEeCC
Confidence            3577888877888888877643  3456899999986553 21    1334557899999999999999999886643

>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*

Probab=85.87  E-value=0.26  Score=38.73  Aligned_cols=50  Identities=26%  Similarity=0.748  Sum_probs=36.0

Q ss_pred             CceeeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccCcceeEEeccC
Q 005110          139 RCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISC  206 (714)
Q Consensus       139 ~CsC~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~C  206 (714)
                      -|.|++|.+-++  +.-.||.|+     .  .|.-|-|+.|+      |+...   ...+..|+|..|
T Consensus         2 ~c~cc~C~~p~~--~~~~mI~Cd-----~--~C~~WfH~~Cv------gl~~~---~~~~~~~~C~~C   51 (52)
T 2kgg_A            2 VCAAQNCQRPCK--DKVDWVQCD-----G--GCDEWFHQVCV------GVSPE---MAENEDYICINC   51 (52)
T ss_dssp             CCSCTTCCCCCC--TTCCEEECT-----T--TTCCEEETTTT------TCCHH---HHHHSCCCCSCC
T ss_pred             cccCCCCcCccC--CCCcEEEeC-----C--CCCccCccccc------CCCcc---ccCCCCEECCCC
Confidence            489999988663  357899998     2  79999999996      22211   112367999888

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*

Probab=85.27  E-value=1.8  Score=42.81  Aligned_cols=83  Identities=7%  Similarity=-0.078  Sum_probs=51.5

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          320 NVIVPNMVKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       320 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      .|+++--|+++..++++|+|-....... ...+.||.+-++...        +... +...+.+.+|.|.+.|.|||.+-
T Consensus         3 ~~~pP~nl~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~~~--------~~~~-~~~~~~~~~~~~~~~y~~~V~a~   73 (314)
T 3bpo_C            3 TQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQ--------DKKI-APETRRSIEVPLNERICLQVGSQ   73 (314)
T ss_dssp             -CCCCEEEEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC--C--------CCEE-ESSSEEEEECCCSSCEEEEEEEC
T ss_pred             cCCCCcceEEEeCCceEEEEEEcCCCCCCCCceEEEEEEecccC--------ceEe-ccccEEEEEEcCCCcEEEEEEEE
Confidence            3466778999999999999998875432 355678887664321        1111 23456789999999999999997


Q ss_pred             cCCccCcceeeEE
Q 005110          399 NGTTELGRCEIWF  411 (714)
Q Consensus       399 ~~~~elg~~E~k~  411 (714)
                      .+.+.+|.+....
T Consensus        74 ~~~~~~g~~s~~~   86 (314)
T 3bpo_C           74 CSTNESEKPSILV   86 (314)
T ss_dssp             C---------CCE
T ss_pred             ecCCCCCCCCcCe
Confidence            7677777654433

>3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R*

Probab=83.78  E-value=4.1  Score=40.09  Aligned_cols=71  Identities=15%  Similarity=0.141  Sum_probs=46.7

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC-C-------------CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDP-S-------------PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPA  388 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~-s-------------~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~  388 (714)
                      .+..|.++. ...+|.|.+..... .             ..+ --|+|-||+....    -. +.--.++.+.|.+|.|.
T Consensus       105 gPP~v~l~~-~~~~l~V~i~~P~~~~~~~~g~~~sl~di~~~-l~Y~V~~~~~~s~----~k-~~~~~~~~~~l~~L~p~  177 (211)
T 3dlq_R          105 KPPDVTCIS-KVRSIQMIVHPTPTPIRAGDGHRLTLEDIFHD-LFYHLELQVNRTY----QM-HLGGKQREYEFFGLTPD  177 (211)
T ss_dssp             CCCCEEEEE-CSSEEEEEECCCBCSCCC----CCBHHHHCTT-CEEEEEEEC--------CE-EEEESSSEEEEESCCTT
T ss_pred             CCCEEEEEE-cCCEEEEEEECCCCccccCCCceeEHHHhcCC-cEEEEEEEECCCc----EE-EEecCCCEEEEccCCCC
Confidence            334577764 45588888765432 1             122 3799999887642    12 33345689999999999


Q ss_pred             eeeeEEEEeccC
Q 005110          389 TEYQFKVVSSNG  400 (714)
Q Consensus       389 TEY~fkvvsF~~  400 (714)
                      |+|+++|-+|..
T Consensus       178 t~YCv~v~~~~~  189 (211)
T 3dlq_R          178 TEFLGTIMILVP  189 (211)
T ss_dssp             CEEEEEEEEEEG
T ss_pred             CcEEEEEEEEEc
Confidence            999999999865

>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2

Probab=83.70  E-value=0.25  Score=41.03  Aligned_cols=46  Identities=33%  Similarity=0.694  Sum_probs=31.3

Q ss_pred             eeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccCcceeEEeccCCC
Q 005110          144 ICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRK  208 (714)
Q Consensus       144 IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk  208 (714)
                      ||.+-++  ++-.||.|+        .|..|-|+.|.=-...         ..+...|+|..|-.
T Consensus        20 ~C~~~~~--~g~~mI~Cd--------~C~~W~H~~Cvg~~~~---------~~~~~~~~C~~C~~   65 (72)
T 1wee_A           20 KCGTKDD--DGERMLACD--------GCGVWHHTRCIGINNA---------DALPSKFLCFRCIE   65 (72)
T ss_dssp             TTCCCSC--CSSCEEECS--------SSCEEEETTTTTCCTT---------SCCCSCCCCHHHHH
T ss_pred             eCCCccC--CCCcEEECC--------CCCCccCCeeeccCcc---------ccCCCcEECCCccC
Confidence            4655432  356799999        8999999999732211         12346899998853

>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2

Probab=82.23  E-value=0.49  Score=39.95  Aligned_cols=51  Identities=24%  Similarity=0.548  Sum_probs=33.8

Q ss_pred             eeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhcc-ccccccCCCccCcceeEEeccCCC
Q 005110          144 ICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNE-RSGIGKDRCYSGLDGSFYCISCRK  208 (714)
Q Consensus       144 IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~-~~G~~~~g~~~~lD~~f~C~~Cgk  208 (714)
                      ||.+.|++   -.||.|+      +..|..|-|+.|.=-.. .++     ........|+|..|-.
T Consensus        20 iC~~~~~~---g~MI~CD------~~~C~~W~H~~CVgi~~~~~~-----~~~~~~~~~~C~~C~~   71 (78)
T 1wew_A           20 VCGNSLET---DSMIQCE------DPRCHVWQHVGCVILPDKPMD-----GNPPLPESFYCEICRL   71 (78)
T ss_dssp             SSCCCCCC---SCEEECS------STTTCCEEEHHHHSCCCTTTC-----SCSCSCSSCCCHHHHH
T ss_pred             ECCCcCCC---CCEEEEC------CccCCccccCEEEcccccccc-----ccccCCCCEECCCCCc
Confidence            67777532   3899998      23899999999973222 121     1124567899998843

>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}

Probab=82.12  E-value=0.28  Score=40.80  Aligned_cols=44  Identities=32%  Similarity=0.630  Sum_probs=31.6

Q ss_pred             eeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccCcceeEEeccCCC
Q 005110          144 ICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRK  208 (714)
Q Consensus       144 IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk  208 (714)
                      ||.+-++   +-.||.|+        .|..|-|+.|.      |+...    .+...|+|..|.+
T Consensus        23 iC~~~~~---~~~MIqCd--------~C~~WfH~~Cv------gi~~~----~~~~~~~C~~C~~   66 (68)
T 3o70_A           23 FCMKPFA---GRPMIECN--------ECHTWIHLSCA------KIRKS----NVPEVFVCQKCRD   66 (68)
T ss_dssp             TTCCCCT---TCCEEECT--------TTCCEEETTTT------TCCTT----SCCSSCCCHHHHT
T ss_pred             ECCCcCC---CCCEEECC--------CCCcccccccc------CcCcc----cCCCcEECCCCCC
Confidence            6766543   67899999        89999999997      33221    1235899998854

>2hft_A Human tissue factor; coagulation factor; 1.69A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1jps_T 1ahw_C 1boy_A 1tfh_A 1wtg_T* 1wss_T* 1wqv_T* 1wun_T* 1wv7_T* 2zp0_T* 2zwl_T* 2zzu_T* 1z6j_T* 2aei_T* 2flb_T* 2b7d_T* 2f9b_T* 1o5d_T* 2flr_T* 1w0y_T* ...

Probab=80.43  E-value=4.2  Score=40.11  Aligned_cols=90  Identities=13%  Similarity=0.141  Sum_probs=54.9

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCC---------CCC----cceEEEEeeecCCC----CC-CCCceeeecCCceeEe
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPS---------PGN----IISYTLWHRRAHEG----FP-ARPTCTLFAPNTRFVV  382 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s---------~~~----i~Gy~LWhrks~~~----y~-~ept~~~~~p~~r~~v  382 (714)
                      .+.+..|.++....++|.|.+......         ..+    -.-|+|-||+....    +. .+-+ .+. ...-+ +
T Consensus       107 ~igPP~v~l~~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~l~Y~v~~w~~~s~~~~~~~~~~k~-~~~-~~~~~-~  183 (218)
T 2hft_A          107 NLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSQEKGEFRSGKKT-AKT-NTNEF-L  183 (218)
T ss_dssp             BCCCCCEEEEEEETTEEEEEECCCEEEEEETTEEEEHHHHHGGGCEEEEEEECCC---------CCEE-EEE-SSSEE-E
T ss_pred             EECCCEEEEEECCCCEEEEEEECCCCccccCCcccchhHhcCCCeEEEEEEEECCCCcccccccceEE-Eec-CCceE-E
Confidence            344455888877777999888664311         122    34599999988642    11 0112 222 23444 4


Q ss_pred             ecCCcceeeeEEEEeccCC----ccCcceeeEEec
Q 005110          383 TGLCPATEYQFKVVSSNGT----TELGRCEIWFST  413 (714)
Q Consensus       383 s~L~P~TEY~fkvvsF~~~----~elg~~E~k~~T  413 (714)
                      .+|.|.|+|+|+|-++-..    +.-|.++.+|.|
T Consensus       184 ~~L~p~t~YCv~v~~~~~~~~~~~~s~~S~~~C~~  218 (218)
T 2hft_A          184 IDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECMG  218 (218)
T ss_dssp             EECCTTCCCEEEEEEECTTCSSSCBCCCCCCEECC
T ss_pred             ecCCCCCCEeEEEEEEEecccCCCcCCCCcCEeeC
Confidence            5699999999999887432    345667877764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	714
d2cuma1	93	b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens)	1e-07
d1tdqa2	92	b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicu	2e-07
d1fnfa3	89	b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 m	3e-07
d1qr4a2	88	b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallu	8e-07
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	9e-07
d1fnaa_	91	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	2e-06
d1tdqa1	93	b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus)	2e-06
d1wfoa1	117	b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens)	5e-06
d1x5za1	102	b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p	5e-06
d1x5xa1	96	b.1.2.1 (A:8-103) Fibronectin type-III domain cont	1e-05
d1j8ka_	94	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	1e-05
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	2e-05
d1fnha3	89	b.1.2.1 (A:183-271) Fibronectin, different Fn3 mod	2e-05
d1qr4a1	87	b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus)	3e-05
d1va9a1	109	b.1.2.1 (A:8-116) Down syndrome cell adhesion mole	3e-05
d1tdqa3	86	b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegic	4e-05
d1x4za1	108	b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {	4e-05
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	5e-05
d1x5fa1	107	b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [	5e-05
d1fnfa1	94	b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 m	6e-05
d1x5ga1	103	b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [	6e-05
d1ueya_	127	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	8e-05
d1x4ya1	101	b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {	9e-05
d1x5ha1	119	b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [	1e-04
d1bpva_	104	b.1.2.1 (A:) Type I titin module {Human (Homo sapi	1e-04
d2dn7a1	94	b.1.2.1 (A:8-101) Receptor-type tyrosine-protein p	2e-04
d1fnfa2	91	b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 m	2e-04
d1cfba2	105	b.1.2.1 (A:710-814) Neuroglian, two amino proximal	2e-04
d1wisa1	111	b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens)	3e-04
d1fnha1	90	b.1.2.1 (A:3-92) Fibronectin, different Fn3 module	4e-04
d2ibga1	95	b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit	4e-04
d1wfna1	106	b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens)	4e-04
d1fnha2	90	b.1.2.1 (A:93-182) Fibronectin, different Fn3 modu	6e-04
d1cfba1	100	b.1.2.1 (A:610-709) Neuroglian, two amino proximal	7e-04
d1x5ja1	100	b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [	7e-04
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	9e-04
d1iarb2	101	b.1.2.1 (B:97-197) Interleukin-4 receptor alpha ch	0.001
d1tena_	90	b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId	0.001
d1wf5a1	108	b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens)	0.001
d3d48r2	104	b.1.2.1 (R:101-204) Prolactin receptor {Human (Hom	0.001
d1x5ya1	98	b.1.2.1 (A:8-105) Myosin binding protein C, fast-t	0.002
d1uema_	117	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	0.002
d1uc6a_	109	b.1.2.1 (A:) Ciliary neurotrophic factor receptor	0.002
d1owwa_	93	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	0.003
d2ic2a1	107	b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit	0.004
d1k85a_	88	b.1.2.1 (A:) Fibronectin type III domain from chit	0.004

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 6/94 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  ++ ++V   +  +        P     Y L                L    T   + 
Sbjct: 5   PRDLEAKEVTPRTALLTW---TEPPVRPAGYLLSFHTPGGQTQ---EILLPGGITSHQLL 58

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSR 417
           GL P+T Y  ++ +  G + L      F+TG  R
Sbjct: 59  GLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGLR 92

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.8 bits (110), Expect = 2e-07
 Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 4/78 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPN-TRFVV 382
           P  ++     ATSL +     D S      Y + +                    T+  +
Sbjct: 4   PKNLRVGSRTATSLDL---EWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTL 60

Query: 383 TGLCPATEYQFKVVSSNG 400
           T L P TEY   + +   
Sbjct: 61  TDLVPGTEYGVGISAVMN 78

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 3e-07
 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 4/77 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  + F D+ A S TV           I  Y + H   H     R    +        +T
Sbjct: 4   PTGIDFSDITANSFTV---HWIAPRATITGYRIRHHPEHFSGRPR-EDRVPHSRNSITLT 59

Query: 384 GLCPATEYQFKVVSSNG 400
            L P TEY   +V+ NG
Sbjct: 60  NLTPGTEYVVSIVALNG 76

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 45.3 bits (106), Expect = 8e-07
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  + F D+   S TV   S  P    + SY + +     G       T+    TR  + 
Sbjct: 4   PKGISFSDITENSATV---SWTPPRSRVDSYRVSYVPITGG--TPNVVTVDGSKTRTKLV 58

Query: 384 GLCPATEYQFKVVSSNGTTE 403
            L P  +Y   ++S  G  E
Sbjct: 59  KLVPGVDYNVNIISVKGFEE 78

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 9e-07
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
             +++ E    TS++++    +   G I+ Y + +         +   TL A  TR  V+
Sbjct: 7   VVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKD--KEMQSYSTLKAVTTRATVS 64

Query: 384 GLCPATEYQFKVVSSN 399
           GL P T Y F+V +  
Sbjct: 65  GLKPGTRYVFQVRART 80

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 2e-06
 Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 327 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLC 386
           ++      TSL +   S D     +  Y + +       P +   T+    +   ++GL 
Sbjct: 3   LEVVAATPTSLLI---SWDAPAVTVRYYRITYGETGGNSPVQEF-TVPGSKSTATISGLK 58

Query: 387 PATEYQFKVVSSNG 400
           P  +Y   V +  G
Sbjct: 59  PGVDYTITVYAVTG 72

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.2 bits (103), Expect = 2e-06
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 4/90 (4%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +   DV  T   V      P    +    L +     G   + T  L  P +++ V 
Sbjct: 7   PTQILVRDVSDTVAFVEW---TPPRAKVDFILLKYGL-VGGEGGKTTFRLQPPLSQYSVQ 62

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFST 413
            L P + Y+  + +  GT E       F+T
Sbjct: 63  ALRPGSRYEVSISAVRGTNESDASSTQFTT 92

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 5e-06
 Identities = 18/76 (23%), Positives = 32/76 (42%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  + F +VR TS+ ++        G I++Y + HR             L     ++  T
Sbjct: 24  PMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQYTAT 83

Query: 384 GLCPATEYQFKVVSSN 399
           GL P + Y F++ +  
Sbjct: 84  GLKPESVYLFRITAQT 99

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 5e-06
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P   K E    TS+ +      P    I +Y L ++    G   R T     P T + + 
Sbjct: 14  PLNFKAEPESETSILLSW--TPPRSDTIANYELVYKDGEHGEEQRIT---IEPGTSYRLQ 68

Query: 384 GLCPATEYQFKVVSSN 399
           GL P + Y F++ + +
Sbjct: 69  GLKPNSLYYFRLAARS 84

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 1e-05
 Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 1/78 (1%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
           +P          T L++       +P +     +      E             +  + V
Sbjct: 3   MPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEME-EETSGYGFKPKYDGEDLAYTV 61

Query: 383 TGLCPATEYQFKVVSSNG 400
             L  +T+Y+FKV++ N 
Sbjct: 62  KNLRRSTKYKFKVIAYNS 79

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 1e-05
 Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 4/95 (4%)

Query: 320 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTR 379
           N+  P  + F DV   S+ +   + +   G +  Y + +    +G               
Sbjct: 1   NIDRPKGLAFTDVDVDSIKI---AWESPQGQVSRYRVTYSSPEDGIH-ELFPAPDGEEDT 56

Query: 380 FVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTG 414
             + GL P +EY   VV+ +   E        ST 
Sbjct: 57  AELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTA 91

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 2e-05
 Identities = 15/85 (17%), Positives = 25/85 (29%), Gaps = 8/85 (9%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTC------TLFA 375
           P  V+   V +T   V             +  Y +++ +                 T   
Sbjct: 18  PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQG 77

Query: 376 PNTRFVVTGLCPATEYQFKVVSSNG 400
             T  ++ GL P + Y   V   NG
Sbjct: 78  SKTHGMLPGLEPFSHYTLNVRVVNG 102

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 4/77 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P+ ++F      SL V   S  P    I  Y + + +     P           T   +T
Sbjct: 4   PSNLRFLATTPNSLLV---SWQPPRARITGYIIKYEKPGSP-PREVVPRPRPGVTEATIT 59

Query: 384 GLCPATEYQFKVVSSNG 400
           GL P TEY   V++   
Sbjct: 60  GLEPGTEYTIYVIALKN 76

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 87

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 41.0 bits (95), Expect = 3e-05
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 6/90 (6%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  ++  D   T+L++              Y L +              +   +T F++ 
Sbjct: 3   PKDLEVSDPTETTLSL---RWRRPVAKFDRYRLTYVSPSGKKN---EMEIPVDSTSFILR 56

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFST 413
           GL   TEY   +V+  G  +     I  ST
Sbjct: 57  GLDAGTEYTISLVAEKGRHKSKPTTIKGST 86

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 3e-05
 Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 5/82 (6%)

Query: 324 PNMVKFEDVRATSLTVVLG--SEDPSPGNIISYTLWHRRAHEGFPARPTCTLF---APNT 378
           P  V  + V + S+ V      ++   G I  Y + +R    G   + +         + 
Sbjct: 12  PMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSE 71

Query: 379 RFVVTGLCPATEYQFKVVSSNG 400
            + +  L    +Y   V + N 
Sbjct: 72  VYTLDNLKKFAQYGVVVQAFNR 93

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.3 bits (93), Expect = 4e-05
 Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 6/80 (7%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +       TS+++       + G I  Y +    +          T+    T + +T
Sbjct: 4   PRDLMVTASSETSISL---IWTKASGPIDHYRITFTPSSGI---SSEVTVPRDRTSYTLT 57

Query: 384 GLCPATEYQFKVVSSNGTTE 403
            L P  EY   + +  G  +
Sbjct: 58  DLEPGAEYIISITAERGRQQ 77

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (95), Expect = 4e-05
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHE-GFPARPTCTLFAPNTRFVV 382
           P+         TS+ V           I S+ + +++  + G     T  +        +
Sbjct: 14  PDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEI 73

Query: 383 TGLCPATEYQFKVVSSN 399
           TGL     Y+F+V + N
Sbjct: 74  TGLEKGISYKFRVRALN 90

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 5e-05
 Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 1/74 (1%)

Query: 327 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGL 385
           V  ++ +  ++ V       + G I  Y +++               +        +  L
Sbjct: 20  VVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQEL 79

Query: 386 CPATEYQFKVVSSN 399
              T Y FK+ + N
Sbjct: 80  TLDTPYYFKIQARN 93

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 5e-05
 Identities = 14/76 (18%), Positives = 22/76 (28%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  V    V    + +   +    P                   R   T      +  + 
Sbjct: 14  PRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQ 73

Query: 384 GLCPATEYQFKVVSSN 399
            L PAT Y F+V++ N
Sbjct: 74  NLMPATVYIFRVMAQN 89

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 6e-05
 Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 1/80 (1%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +  E    T   + +  E  +  +I  Y +     +          + A  +     
Sbjct: 5   PTNLHLEANPDTG-VLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFD 63

Query: 384 GLCPATEYQFKVVSSNGTTE 403
            L P  EY   V +     E
Sbjct: 64  NLSPGLEYNVSVYTVKDDKE 83

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 6e-05
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 4/76 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
              ++      TS+TV   +     G I +Y L++              +   +  + + 
Sbjct: 14  APNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGT----DKEQDVDVSSHSYTIN 69

Query: 384 GLCPATEYQFKVVSSN 399
           GL   TEY F+VV+ N
Sbjct: 70  GLKKYTEYSFRVVAYN 85

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 127

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 8e-05
 Identities = 13/77 (16%), Positives = 25/77 (32%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  ++  D    S+ +     D +   I  + + +  A          T  +        
Sbjct: 20  PFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQL 79

Query: 384 GLCPATEYQFKVVSSNG 400
            L P   Y F+V++ N 
Sbjct: 80  NLSPYVNYSFRVMAVNS 96

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.0 bits (92), Expect = 9e-05
 Identities = 12/80 (15%), Positives = 23/80 (28%), Gaps = 3/80 (3%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGN---IISYTLWHRRAHEGFPARPTCTLFAPNTRF 380
           P +   + V  T++ +       S  N      Y  +     +         +       
Sbjct: 5   PYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWH 64

Query: 381 VVTGLCPATEYQFKVVSSNG 400
            ++ L P T Y  K+   N 
Sbjct: 65  SISHLQPETSYDIKMQCFNE 84

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 119

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 1e-04
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 3/78 (3%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRFV 381
           P  +  E   + S+ +      P+  N  I  Y + +R+A        T          +
Sbjct: 15  PQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVS-GTQLSQL 73

Query: 382 VTGLCPATEYQFKVVSSN 399
           + GL   TEY F+V +  
Sbjct: 74  IEGLDRGTEYNFRVAALT 91

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (91), Expect = 1e-04
 Identities = 13/76 (17%), Positives = 28/76 (36%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P      ++   ++T+     + + G  I+  +  +R                   F V+
Sbjct: 6   PGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVS 65

Query: 384 GLCPATEYQFKVVSSN 399
           GL     Y+F+V++ N
Sbjct: 66  GLTEDAAYEFRVIAKN 81

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 2e-04
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 331 DVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATE 390
                +  +        PG ++ Y L + RA E  P   T      +  F VTGL   T 
Sbjct: 10  TTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPN--TIDFGKDDQHFTVTGLHKGTT 67

Query: 391 YQFKVVSSN 399
           Y F++ + N
Sbjct: 68  YIFRLAAKN 76

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 2e-04
 Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 3/91 (3%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  ++F ++   ++ V   +  P P   ++  L      +        ++   +   V+T
Sbjct: 4   PTDLRFTNIGPDTMRV---TWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLT 60

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFSTG 414
            L P TEY   V S     E         TG
Sbjct: 61  NLLPGTEYVVSVSSVYEQHESTPLRGRQKTG 91

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 12/78 (15%), Positives = 21/78 (26%), Gaps = 2/78 (2%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRFV 381
           P+ V  +     +L +          N     Y +  +R                    V
Sbjct: 8   PDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIV 67

Query: 382 VTGLCPATEYQFKVVSSN 399
           +       +Y  KVV+ N
Sbjct: 68  IADQPTFVKYLIKVVAIN 85

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 3e-04
 Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 4/81 (4%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG----FPARPTCTLFAPNTR 379
           P  +   ++   S+T+          +I  + +  +    G    +      +       
Sbjct: 14  PTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARS 73

Query: 380 FVVTGLCPATEYQFKVVSSNG 400
             V  L P T Y F++   N 
Sbjct: 74  MEVPDLNPFTCYSFRMRQVNI 94

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 4e-04
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 4/90 (4%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +KF  V  TSL+       P    +  Y +      +  P +        ++  VV+
Sbjct: 3   PTDLKFTQVTPTSLSA---QWTPPNVQLTGYRVRVTPKEKTGPMKEINLA-PDSSSVVVS 58

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFST 413
           GL  AT+Y+  V +   T      +   +T
Sbjct: 59  GLMVATKYEVSVYALKDTLTSRPAQGVVTT 88

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 37.8 bits (86), Expect = 4e-04
 Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPG-NIISYTLWHRRAHEGFPARPTCTLFAPNTRFV 381
           VP +++ E+   T++ +       +    I  Y  ++R +             A    F 
Sbjct: 9   VPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFK 68

Query: 382 VTGLCPATEYQFKVVSSNG 400
           +  L  AT Y+FK+ S + 
Sbjct: 69  IAPLETATMYEFKLQSFSA 87

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 4e-04
 Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 1/76 (1%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
              + F ++  TSL V         G +  Y +     +                 + VT
Sbjct: 14  VGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYLP-NVTLEYRVT 72

Query: 384 GLCPATEYQFKVVSSN 399
           GL   T Y  +V +  
Sbjct: 73  GLTALTTYTIEVAAMT 88

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 6e-04
 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 320 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTR 379
           NV  P   +  D   T++T+   S       I  + +    A+   P + T         
Sbjct: 1   NVSPPRRARVTDATETTITI---SWRTKTETITGFQVDAVPANGQTPIQRTIK--PDVRS 55

Query: 380 FVVTGLCPATEYQFKVVSSNG 400
           + +TGL P T+Y+  + + N 
Sbjct: 56  YTITGLQPGTDYKIYLYTLND 76

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 37.3 bits (85), Expect = 7e-04
 Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 2/79 (2%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRF 380
           VPN  K   +   +    +  E        I+ YT+    +                   
Sbjct: 5   VPNAPKLTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSS 64

Query: 381 VVTGLCPATEYQFKVVSSN 399
            V  + P   Y F+V++ N
Sbjct: 65  FVVQMSPWANYTFRVIAFN 83

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 7e-04
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 324 PNMVKFEDVRATSLTVVLG--SEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFV 381
           P  V+   +   ++ +     S         S     R               A    ++
Sbjct: 5   PVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYL 64

Query: 382 VTGLCPATEYQFKVVSSNG 400
           VTGL P T Y+F V+ + G
Sbjct: 65  VTGLKPNTLYEFSVMVTKG 83

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (89), Expect = 9e-04
 Identities = 13/103 (12%), Positives = 30/103 (29%)

Query: 307 SNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFP 366
            ++     S   ++  +   ++    R T    +         +    +L          
Sbjct: 84  EDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNE 143

Query: 367 ARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEI 409
                         V++GL   T Y+ ++ + N  T   RC +
Sbjct: 144 EHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSV 186

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 8/80 (10%), Positives = 22/80 (27%), Gaps = 4/80 (5%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLF----APNTR 379
           P  +      + +L +   +  P    + ++  +                      P+ R
Sbjct: 5   PGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLR 64

Query: 380 FVVTGLCPATEYQFKVVSSN 399
              + L     Y+ +V +  
Sbjct: 65  IAASTLKSGISYRARVRAWA 84

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (83), Expect = 0.001
 Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 4/90 (4%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P+ ++ +DV  T+  +   +       I    L +           T  L     ++ + 
Sbjct: 5   PSQIEVKDVTDTTALI---TWFKPLAEIDGIELTYGIKDVPGDRT-TIDLTEDENQYSIG 60

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFST 413
            L P TEY+  ++S  G       +  F+T
Sbjct: 61  NLKPDTEYEVSLISRRGDMSSNPAKETFTT 90

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 0.001
 Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 1/73 (1%)

Query: 327 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLC 386
                V   ++ +           +I Y L     +  +            T   V GL 
Sbjct: 19  ATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASV-DPKATSVTVKGLV 77

Query: 387 PATEYQFKVVSSN 399
           PA  YQF++ + N
Sbjct: 78  PARSYQFRLCAVN 90

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 14/75 (18%), Positives = 21/75 (28%), Gaps = 1/75 (1%)

Query: 327 VKFEDVRATSLTVVLGSEDPSPGNIISYTL-WHRRAHEGFPARPTCTLFAPNTRFVVTGL 385
           VK  + R   L +              +TL +  R      A          T F +  L
Sbjct: 13  VKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFAGQQTEFKILSL 72

Query: 386 CPATEYQFKVVSSNG 400
            P  +Y  +V     
Sbjct: 73  HPGQKYLVQVRCKPD 87

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 17/76 (22%), Positives = 21/76 (27%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  +  EDV  T+ T+     D      I   L            P          F V 
Sbjct: 5   PQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVK 64

Query: 384 GLCPATEYQFKVVSSN 399
            L       F+VV  N
Sbjct: 65  DLPTGARILFRVVGVN 80

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.002
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P+  +  DV   S+T+      P      +Y +           +         T + V 
Sbjct: 19  PSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVAN-HVKTTLYTVR 77

Query: 384 GLCPATEYQFKVVSSN 399
           GL P T Y F V + N
Sbjct: 78  GLRPNTIYLFMVRAIN 93

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (82), Expect = 0.002
 Identities = 11/78 (14%), Positives = 22/78 (28%), Gaps = 2/78 (2%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFV 381
           P  V    V +    + +  + P   P        +  R       +      +  T   
Sbjct: 11  PENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSNGTAHT 70

Query: 382 VTGLCPATEYQFKVVSSN 399
           +T      EY  +V + +
Sbjct: 71  ITDAYAGKEYIIQVAAKD 88

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.003
 Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 383
           P  V   +  +   +  +    P P +I  Y L  R  +     +   T+      + + 
Sbjct: 3   PVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE-ATIPGHLNSYTIK 61

Query: 384 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGS 415
           GL P   Y+ +++S             F+T S
Sbjct: 62  GLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 93

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 35.4 bits (80), Expect = 0.004
 Identities = 10/87 (11%), Positives = 26/87 (29%), Gaps = 11/87 (12%)

Query: 324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-----------FPARPTCT 372
           P       +   S+ +           I+ + + +R   +            +      +
Sbjct: 3   PTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNS 62

Query: 373 LFAPNTRFVVTGLCPATEYQFKVVSSN 399
               +    VT L P   Y+F++++  
Sbjct: 63  ELGKSFTASVTDLKPQHTYRFRILAVY 89

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

 Score = 34.8 bits (79), Expect = 0.004
 Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 10/78 (12%)

Query: 323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 382
            P  +       +S+T+       +    ++    +                   T   +
Sbjct: 6   APTNLASTAQTTSSITLSW--TASTDNVGVTGYDVYNGTALATTV--------TGTTATI 55

Query: 383 TGLCPATEYQFKVVSSNG 400
           +GL   T Y F V + + 
Sbjct: 56  SGLAADTSYTFTVKAKDA 73

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	714
d2ibga1	95	Hedgehog receptor iHog {Fruit fly (Drosophila mela	98.92
d2fnba_	95	Fibronectin, different Fn3 modules {Human (Homo sa	98.91
d1fnha3	89	Fibronectin, different Fn3 modules {Human (Homo sa	98.86
d1tdqa2	92	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	98.85
d1qr4a2	88	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	98.84
d1tena_	90	Tenascin {Human (Homo sapiens) [TaxId: 9606]}	98.83
d1fnfa3	89	Fibronectin, different Fn3 modules {Human (Homo sa	98.8
d1fnfa2	91	Fibronectin, different Fn3 modules {Human (Homo sa	98.79
d1qr4a1	87	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	98.78
d1j8ka_	94	Fibronectin, different Fn3 modules {Human (Homo sa	98.77
d2cuma1	93	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	98.76
d1fnha2	90	Fibronectin, different Fn3 modules {Human (Homo sa	98.73
d1fnha1	90	Fibronectin, different Fn3 modules {Human (Homo sa	98.7
d2dn7a1	94	Receptor-type tyrosine-protein phosphatase F, PTPR	98.69
d2djsa1	95	Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta	98.66
d2vkwa2	93	Neural cell adhesion molecule 1, NCAM {Human (Homo	98.63
d1fnaa_	91	Fibronectin, different Fn3 modules {Human (Homo sa	98.62
d1x5ga1	103	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.61
d1fnfa1	94	Fibronectin, different Fn3 modules {Human (Homo sa	98.61
d1wfoa1	117	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	98.6
d1ujta_	120	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	98.55
d1x5la1	98	Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta	98.55
d1qg3a1	92	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	98.55
d1x5za1	102	Receptor-type tyrosine-protein phosphatase delta,	98.53
d1x5fa1	107	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.52
d1wfna1	106	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	98.52
d1x4ya1	101	Brother of CDO precursor (BOC) {Mouse (Mus musculu	98.52
d2cuha1	102	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	98.47
d1tdqa1	93	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	98.46
d1tdqa3	86	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	98.44
d1x5ka1	111	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.41
d1x5xa1	96	Fibronectin type-III domain containing protein 3a,	98.41
d1uema_	117	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	98.4
d2b5ib2	104	Interleukin-2 receptor beta chain {Human (Homo sap	98.39
d1qg3a2	103	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	98.37
d1x5aa1	94	Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta	98.36
d1x5ja1	100	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.35
d1cfba1	100	Neuroglian, two amino proximal Fn3 repeats {Drosop	98.33
d1x4za1	108	Brother of CDO precursor (BOC) {Mouse (Mus musculu	98.33
d1x5ha1	119	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.33
d2haza1	101	Neural cell adhesion molecule 1, NCAM {Human (Homo	98.3
d1wf5a1	108	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	98.3
d1bpva_	104	Type I titin module {Human (Homo sapiens) [TaxId:	98.28
d1x3da1	105	Fibronectin type-III domain containing protein 3a,	98.27
d1wfta_	123	Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T	98.27
d2dtge3	125	Insulin receptor {Human (Homo sapiens) [TaxId: 960	98.26
d1x4xa1	93	Fibronectin type-III domain containing protein 3a,	98.25
d1x5ya1	98	Myosin binding protein C, fast-type {Mouse (Mus mu	98.23
d1wfua_	120	Fibronectin type 3 and ankyrin repeat domains 1 pr	98.22
d2cuia1	101	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	98.21
d1va9a1	109	Down syndrome cell adhesion molecule-like protein	98.21
d1v5ja_	108	KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}	98.19
d1cfba2	105	Neuroglian, two amino proximal Fn3 repeats {Drosop	98.19
d1wisa1	111	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	98.15
d1ueya_	127	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	98.15
d2crza1	97	Fibronectin type-III domain containing protein 3a,	98.11
d1k85a_	88	Fibronectin type III domain from chitinase A1. {Ba	98.1
d1owwa_	93	Fibronectin, different Fn3 modules {Human (Homo sa	98.08
d2ic2a1	107	Hedgehog receptor iHog {Fruit fly (Drosophila mela	98.07
d1x5ia1	113	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.06
d2crma1	107	Fibronectin type-III domain containing protein 3a,	98.03
d1bqua2	115	Cytokine receptor gp130 cytokine-binding domains {	97.99
d2d9qb2	105	Granulocyte colony-stimulating factor (GC-SF) rece	97.98
d1uena_	125	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	97.89
d1wk0a_	137	Fibronectin type-III domain containing protein 3a,	97.88
d1cd9b2	106	Granulocyte colony-stimulating factor (GC-SF) rece	97.79
d1wj3a_	117	Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI	97.79
d3d48r2	104	Prolactin receptor {Human (Homo sapiens) [TaxId: 9	97.78
d1iarb2	101	Interleukin-4 receptor alpha chain {Human (Homo sa	97.74
d1bqua1	95	Cytokine receptor gp130 cytokine-binding domains {	97.7
d2dtge1	102	Insulin receptor {Human (Homo sapiens) [TaxId: 960	97.67
d1cd9b1	107	Granulocyte colony-stimulating factor (GC-SF) rece	97.55
d1n26a3	104	Interleukin-6 receptor alpha chain, domains 2 and	97.54
d1f6fb2	103	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	97.42
d2gysa4	100	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	97.41
d2b5ic1	95	Cytokine receptor common gamma chain {Human (Homo	97.27
d1erna2	105	Erythropoietin (EPO) receptor {Human (Homo sapiens	97.11
d1axib2	106	Growth hormone receptor {Human (Homo sapiens) [Tax	96.87
d1uc6a_	109	Ciliary neurotrophic factor receptor alpha {Human	96.87
d2gysa2	114	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	96.76
d2cspa1	117	Rim binding protein 2 {Human (Homo sapiens) [TaxId	96.14
d1fyhb1	98	Interferon-gamma receptor alpha chain {Human (Homo	96.11
d2dtge2	196	Insulin receptor {Human (Homo sapiens) [TaxId: 960	95.77
d1wepa_	79	PHD finger protein 8 {Mouse (Mus musculus) [TaxId:	93.91
d1we9a_	64	PHD finger protein At5g26210 {Thale cress (Arabido	93.84
d2dtge2	196	Insulin receptor {Human (Homo sapiens) [TaxId: 960	93.73
d1y6kr1	99	Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa	93.28
d2c4fu1	116	Extracellular region of human tissue factor {Human	92.44
d1weea_	72	PHD finger protein At1g33420 {Thale cress (Arabido	88.86
d1weva_	88	PHD finger protein 22 {Mouse (Mus musculus) [TaxId	87.4
d1f62a_	51	Williams-Beuren syndrome transcription factor, WST	82.39
d1xzwa1	119	Purple acid phosphatase, N-terminal domain {Sweet	81.69
d1wewa_	78	Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop	81.33

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.92  E-value=6.7e-10  Score=91.55  Aligned_cols=84  Identities=19%  Similarity=0.202  Sum_probs=64.4

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          320 NVIVPNMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       320 ~l~~~~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      .++++..++++.++++||.|.++.... ....|.||+|+||.....-...-..+.....+.+.|+||.|.|.|.|||.+|
T Consensus         6 P~~~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~   85 (95)
T d2ibga1           6 PMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSF   85 (95)
T ss_dssp             CCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEE
T ss_pred             CCCCCcCeEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeeeeccCCceeEEEEeeccCCeEEEEEEEEE
Confidence            345666789999999999999986543 4566999999999876541111112334567889999999999999999999


Q ss_pred             cCCcc
Q 005110          399 NGTTE  403 (714)
Q Consensus       399 ~~~~e  403 (714)
                      ++.|+
T Consensus        86 n~~G~   90 (95)
T d2ibga1          86 SAASA   90 (95)
T ss_dssp             CSSCB
T ss_pred             eCCcc
Confidence            99874

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=1.3e-09  Score=89.53  Aligned_cols=89  Identities=22%  Similarity=0.260  Sum_probs=69.2

Q ss_pred             CCCCcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEE
Q 005110          317 QGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKV  395 (714)
Q Consensus       317 q~~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkv  395 (714)
                      ++..+|++..+++.+|+++||+|-++..+  ...|.||+|+|+..... ...  ...+....+.+.|+||.|.|+|.|+|
T Consensus         2 ~~~~vp~P~~l~v~~~t~~si~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~t~~~i~~L~p~t~Y~~~V   77 (95)
T d2fnba_           2 RGSEVPQLTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIF--EDFVDSSVGYYTVTGLEPGIDYDISV   77 (95)
T ss_dssp             CSCCSCCCTTCEEECCCSSCEEEECCCCC--CSSCCEEEEEEEEETSCCEEE--EEECCSSCSEEEECCCCTTSEEEEEE
T ss_pred             CcCCcCcCCCeEEEEEcCCEEEEEEEecC--CceEEeEEEEEEEeeccceEE--EEEeCCCCeEEEEecccCCEEEEEEE
Confidence            45667888899999999999999997543  45699999999988664 211  12345667899999999999999999


Q ss_pred             EeccCCccCcceee
Q 005110          396 VSSNGTTELGRCEI  409 (714)
Q Consensus       396 vsF~~~~elg~~E~  409 (714)
                      .++++.|+=....+
T Consensus        78 ~a~~~~g~s~p~~~   91 (95)
T d2fnba_          78 ITLINGGESAPTTL   91 (95)
T ss_dssp             EEEETTEECCCCEE
T ss_pred             EEEeCCcEeCCEEE
Confidence            99998775333333

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=5.2e-09  Score=84.95  Aligned_cols=88  Identities=20%  Similarity=0.181  Sum_probs=68.5

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      .++--+++.+++++|++|..+..   ..+|.||.|.|+..... .......+....+.+.|.||.|.|+|.|+|.++++.
T Consensus         2 daP~nl~v~~~~~~s~~l~W~~p---~~~i~~Y~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~n~~   77 (89)
T d1fnha3           2 DAPSNLRFLATTPNSLLVSWQPP---RARITGYIIKYEKPGSP-PREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNN   77 (89)
T ss_dssp             CCCEEEEEEEEETTEEEEEEECC---SSCCSEEEEEEECTTSC-CEECTTCCCTTCCEEEEESCCTTCEEEEEEEEESSS
T ss_pred             ccCcCCEEEEecCCEEEEEEeCC---CcCCceEEEEEeeccCC-ccEEEEEcCCCccEEEEEeeeCCCEEEEEEEEEcCC
Confidence            45667999999999999999854   25699999999987654 111222345668899999999999999999999998


Q ss_pred             ccCcceeeEEec
Q 005110          402 TELGRCEIWFST  413 (714)
Q Consensus       402 ~elg~~E~k~~T  413 (714)
                      |+-....++..|
T Consensus        78 g~S~p~~~~~~T   89 (89)
T d1fnha3          78 QKSEPLIGRKKT   89 (89)
T ss_dssp             CEEEEEEEEEEC
T ss_pred             CEeCCEEEEEEC
Confidence            875555555554

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.85  E-value=3.7e-09  Score=85.48  Aligned_cols=89  Identities=17%  Similarity=0.137  Sum_probs=69.0

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCC-CceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPAR-PTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~e-pt~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      .++..+++.+++++||+|-.+..   ..+|.||.|.|+......... ........++.+.|.||.|.|+|.|+|.++++
T Consensus         2 daP~~l~v~~~~~~sv~v~W~~p---~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   78 (92)
T d1tdqa2           2 DAPKNLRVGSRTATSLDLEWDNS---EAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMN   78 (92)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECC---SSCCSEEEEEEEETTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEET
T ss_pred             ccCcCCEEEEecCCEEEEEEEec---CCcccceEEEEEEcCCCcceeeEEEecCCCeeEEEECCccCCCEEEEEEEEEeC
Confidence            45667999999999999998654   356999999999876542111 12233456788999999999999999999999


Q ss_pred             CccCcceeeEEec
Q 005110          401 TTELGRCEIWFST  413 (714)
Q Consensus       401 ~~elg~~E~k~~T  413 (714)
                      .|+=....+.+.|
T Consensus        79 ~g~s~p~~~~~~T   91 (92)
T d1tdqa2          79 SKQSIPATMNART   91 (92)
T ss_dssp             TEECCCEEEEEEC
T ss_pred             CCEecCEEEEEEC
Confidence            9876666777666

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.84  E-value=7.2e-09  Score=84.69  Aligned_cols=82  Identities=22%  Similarity=0.281  Sum_probs=66.7

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      .++-.++|.+|+++|++|-++..   ..++.||.|+|+.....  ..-+..+....+++.|.||.|.|+|.|+|.++++.
T Consensus         2 ~~P~~l~v~~v~~~s~~l~W~~~---~~~~~~Y~i~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~   76 (88)
T d1qr4a2           2 GSPKGISFSDITENSATVSWTPP---RSRVDSYRVSYVPITGG--TPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGF   76 (88)
T ss_dssp             CCCSCEEEESCCSSCEEEEECCC---SSCCSEEEEEEEETTCC--CCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETT
T ss_pred             cCCcceEEEEecCCEEEEEEEcc---cEeeceEEEEEEeccCC--ceEEEEecCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            45567999999999999999754   35799999999998764  22345668889999999999999999999999998


Q ss_pred             ccCccee
Q 005110          402 TELGRCE  408 (714)
Q Consensus       402 ~elg~~E  408 (714)
                      |+=-...
T Consensus        77 g~s~p~~   83 (88)
T d1qr4a2          77 EESEPIS   83 (88)
T ss_dssp             EECCCEE
T ss_pred             CCcCCEE
Confidence            7533333

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=8.2e-09  Score=84.09  Aligned_cols=89  Identities=20%  Similarity=0.241  Sum_probs=71.2

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      |.++-.+++.+|+++||+|-....   ..++.||.|.|+..... ...-...+....+.+.|.||.|.|+|.|+|.++++
T Consensus         2 ld~P~~l~v~~~s~~s~~l~W~~p---~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   77 (90)
T d1tena_           2 LDAPSQIEVKDVTDTTALITWFKP---LAEIDGIELTYGIKDVP-GDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG   77 (90)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECC---SSCCSEEEEEEEETTCT-TCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCCCcEEEEecCCEEEEEEEeC---ceEeccEEEEEEEcCCC-ceeEEEEecCCcceeeEeeecCCCEEEEEEEEEeC
Confidence            345668999999999999999743   35799999999987653 11123356778899999999999999999999999


Q ss_pred             CccCcceeeEEec
Q 005110          401 TTELGRCEIWFST  413 (714)
Q Consensus       401 ~~elg~~E~k~~T  413 (714)
                      .|+-...+..+.|
T Consensus        78 ~g~s~~~~~~~~T   90 (90)
T d1tena_          78 DMSSNPAKETFTT   90 (90)
T ss_dssp             TEECCCEEEEEEC
T ss_pred             CCEeCCEEEEEEC
Confidence            9987777766655

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1e-08  Score=83.41  Aligned_cols=87  Identities=25%  Similarity=0.246  Sum_probs=67.6

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      .++-.+++.+|+++||+|..+..   ...+.||+|.|+....... .-...+...++.+.|.||.|.|+|.|+|.++++.
T Consensus         2 d~P~~l~v~~vt~~sv~l~W~~p---~~~~~~Y~i~~~~~~~~~~-~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~a~~~~   77 (89)
T d1fnfa3           2 DSPTGIDFSDITANSFTVHWIAP---RATITGYRIRHHPEHFSGR-PREDRVPHSRNSITLTNLTPGTEYVVSIVALNGR   77 (89)
T ss_dssp             CCCEEEEEESCCSSEEEEEEECC---SSCCSEEEEEEECSCCSSC-CEEEEEETTCCEEEEESCCTTCEEEEEEEEEETT
T ss_pred             ccCcCCEEEEecCCEEEEEEEeC---CCEEeeEEEEEEECCCCCc-eEEEEECCCccEEEECCCcccCEEEEEEEEEcCC
Confidence            35567999999999999999764   2569999999998765422 1233567788999999999999999999999988


Q ss_pred             ccCcceeeEEe
Q 005110          402 TELGRCEIWFS  412 (714)
Q Consensus       402 ~elg~~E~k~~  412 (714)
                      |+=....++..
T Consensus        78 g~s~p~~~~~~   88 (89)
T d1fnfa3          78 EESPLLIGQQS   88 (89)
T ss_dssp             EECCCEEEEEE
T ss_pred             cCcCCEEEEEE
Confidence            76444444443

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.1e-08  Score=83.03  Aligned_cols=90  Identities=17%  Similarity=0.197  Sum_probs=69.1

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      +|++--+++.+++++||+|.++...  ...|.||.|.|+........ -...+....+.+.|.||.|.|+|.|+|.++++
T Consensus         1 vPpP~~l~~~~~~~~sv~l~W~~p~--~~~~~~y~v~y~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   77 (91)
T d1fnfa2           1 VPPPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDV-AELSISPSDNAVVLTNLLPGTEYVVSVSSVYE   77 (91)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECCT--TCCCSEEEEEEEETTCTTCC-EEEEECTTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred             CccCCceEEEEeCCCEEEEEEEecC--CCCcceeEEEEEECCCCccE-EEEEeCCCceEEEEeceeCCCEEEEEEEEEcC
Confidence            3566789999999999999997543  35699999999988765211 12345667889999999999999999999998


Q ss_pred             CccCcceeeEEec
Q 005110          401 TTELGRCEIWFST  413 (714)
Q Consensus       401 ~~elg~~E~k~~T  413 (714)
                      .|+=-..-++..|
T Consensus        78 ~g~S~p~~~~~~T   90 (91)
T d1fnfa2          78 QHESTPLRGRQKT   90 (91)
T ss_dssp             TEECCCEEEEEEC
T ss_pred             CCCCCCEEEEEEC
Confidence            8864444444444

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.78  E-value=1.4e-08  Score=82.40  Aligned_cols=85  Identities=21%  Similarity=0.239  Sum_probs=68.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++-.+++.+++++||+|-.+...   ..+.||.|+|+.....   .....+....+.+.|.||.|.|+|.|+|.+|++.+
T Consensus         2 aP~~l~v~~~t~~sv~v~W~~p~---~~~~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~   75 (87)
T d1qr4a1           2 NPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPSGK---KNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGRH   75 (87)
T ss_dssp             CCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECTTCC---EEEEEECTTCSEEEEESCCSSCEEEEEEEEESSSC
T ss_pred             cCcCcEEEEecCCEEEEEEECCC---CCcceeEEEeecCCcc---eeEEeCCCCcCEEEECCCCcCCEEEEEEEEEcCCC
Confidence            34578999999999999998643   5699999999987653   23345678899999999999999999999999998


Q ss_pred             cCcceeeEEec
Q 005110          403 ELGRCEIWFST  413 (714)
Q Consensus       403 elg~~E~k~~T  413 (714)
                      +=....+.+.|
T Consensus        76 ~s~~~~~~~~T   86 (87)
T d1qr4a1          76 KSKPTTIKGST   86 (87)
T ss_dssp             BCCCEEEEEEC
T ss_pred             CccCEEEEEEc
Confidence            75555666555

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.5e-08  Score=82.80  Aligned_cols=88  Identities=22%  Similarity=0.229  Sum_probs=69.9

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      |.++-.++|.+|+++||+|-.+...   .++.||.++|+..... ...  ..++...++.+.|+||.|.|+|.|+|.+++
T Consensus         2 ~d~P~~l~v~~vt~~sv~l~W~~p~---~~~~~y~i~~~~~~~~~~~~--~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~   76 (94)
T d1j8ka_           2 IDRPKGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGIHEL--FPAPDGEEDTAELQGLRPGSEYTVSVVALH   76 (94)
T ss_dssp             CCCCCCCEEEEEETTEEEEECCCCS---SCCSCEEEEEEETTTEEEEE--CCCCCSSCCEEEECSCCCCSEEEEEEEECS
T ss_pred             CCCCCCCEEEEecCCEEEEEEeCCC---ccccceEEEEEeecCCCceE--EEecCCCccEEEECCCCCCCEEEEEEEEEe
Confidence            4566789999999999999997542   4699999999987664 221  223456788999999999999999999999


Q ss_pred             CCccCcceeeEEec
Q 005110          400 GTTELGRCEIWFST  413 (714)
Q Consensus       400 ~~~elg~~E~k~~T  413 (714)
                      +.|+-......+.|
T Consensus        77 ~~g~S~p~~~~~~T   90 (94)
T d1j8ka_          77 DDMESQPLIGTQST   90 (94)
T ss_dssp             SSCCCCCEEEEEEC
T ss_pred             CCCCcCCEEEEEEE
Confidence            98876666666665

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=2.4e-08  Score=81.75  Aligned_cols=91  Identities=20%  Similarity=0.220  Sum_probs=73.6

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      |.++-.+++.+++++||+|-++..   ...+.||.|+|+......   -.-.+....+.+.|.||.|.|+|.|+|.++++
T Consensus         2 l~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~---~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   75 (93)
T d2cuma1           2 LEAPRDLEAKEVTPRTALLTWTEP---PVRPAGYLLSFHTPGGQT---QEILLPGGITSHQLLGLFPSTSYNARLQAMWG   75 (93)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECC---SSCCSEEEEEEECTTSCE---EEEEECSSCSEEEECSCCTTCEEEEEEEEEBT
T ss_pred             cCcCCCCEEEEeCCCEEEEEEEcc---ccccccEEEEEEcccccc---EEEEECCCccEEEEeCccCCCEEEEEEEEEeC
Confidence            456667999999999999999754   246999999998865431   12244667788999999999999999999999


Q ss_pred             CccCcceeeEEecCccc
Q 005110          401 TTELGRCEIWFSTGSSR  417 (714)
Q Consensus       401 ~~elg~~E~k~~T~s~e  417 (714)
                      .|.-....+.+.|..+.
T Consensus        76 ~g~s~~~~~~~tT~g~~   92 (93)
T d2cuma1          76 QSLLPPVSTSFTTGGLR   92 (93)
T ss_dssp             TBCCCCEEEEEECCCSC
T ss_pred             CCCCCCEEEEEEeCCee
Confidence            99888888888887654

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=3.5e-08  Score=80.64  Aligned_cols=88  Identities=22%  Similarity=0.279  Sum_probs=68.8

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      +.++-.+++.+++++|++|.+...   ..++.||.|+|+........  ..++...++.+.|.||+|.|+|.|+|.++++
T Consensus         2 ~spP~~l~v~~~~~~si~v~W~~p---~~~~~~Y~i~~~~~~~~~~~--~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   76 (90)
T d1fnha2           2 VSPPRRARVTDATETTITISWRTK---TETITGFQVDAVPANGQTPI--QRTIKPDVRSYTITGLQPGTDYKIYLYTLND   76 (90)
T ss_dssp             CCCCEEEEEEEECSSEEEEEEECC---SSCCCCEEEEEEESSSSCCE--EEECCTTCSEEEEESCCTTCEEEEEEEEEET
T ss_pred             cCcCCCCEEEEecCCEEEEEEECC---CCCCceeEEEEEEccCCceE--EEecCCCccEEEeCCCCCCcEEEEEEEEEeC
Confidence            345667999999999999999754   25799999999987553221  3345677999999999999999999999999


Q ss_pred             CccCcceeeEEec
Q 005110          401 TTELGRCEIWFST  413 (714)
Q Consensus       401 ~~elg~~E~k~~T  413 (714)
                      .|+--...+...|
T Consensus        77 ~g~s~p~~~~~~T   89 (90)
T d1fnha2          77 NARSSPVVIDAST   89 (90)
T ss_dssp             TEECCCEEEEEEC
T ss_pred             CCCcCCEEEEEEC
Confidence            8875554444444

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=5.4e-08  Score=78.73  Aligned_cols=88  Identities=22%  Similarity=0.227  Sum_probs=72.7

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      |++-.+++.+|+++||+|-....   ...+.||.+.|+..... .......+....+++.|+||.|.|+|.|||.++++.
T Consensus         1 PpP~~l~~~~v~~~si~l~W~~p---~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~   76 (90)
T d1fnha1           1 PAPTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKT-GPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDT   76 (90)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECC---SSCCSEEEEEEEESSSC-SCCCEEEECTTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCCCEEEEEecCCEEEEEEEcc---ceeccceEEEEEeeeCC-CceEEEEeCCCCeEEEEecccCceEEEEEEEEEeCC
Confidence            45667999999999999999653   35799999999877654 233345678899999999999999999999999999


Q ss_pred             ccCcceeeEEec
Q 005110          402 TELGRCEIWFST  413 (714)
Q Consensus       402 ~elg~~E~k~~T  413 (714)
                      |+=-..++.+.|
T Consensus        77 g~s~~~~~~~~T   88 (90)
T d1fnha1          77 LTSRPAQGVVTT   88 (90)
T ss_dssp             EECCCEEEEEEC
T ss_pred             CCcCCEeEEEEc
Confidence            887777877766

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=4.8e-08  Score=79.83  Aligned_cols=88  Identities=22%  Similarity=0.250  Sum_probs=69.6

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +..+....+++++++|.+.........|.||.|.||.....  ......+....+.+.|.||.|.|.|.|||.+|+..|.
T Consensus         3 ~P~~~~~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   80 (94)
T d2dn7a1           3 RPTMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEA--RPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGL   80 (94)
T ss_dssp             CCEEEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCS--SCEEEEEETTCCEEEEECCCTTCEEEEEEEEEETTEE
T ss_pred             CCcEeEEEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCC--CcEEEEcCCCccEEEEEccCCeeEEEEEEEEEcCCcC
Confidence            34567788999999999886654566899999999987653  2234456777889999999999999999999999996


Q ss_pred             CcceeeEEec
Q 005110          404 LGRCEIWFST  413 (714)
Q Consensus       404 lg~~E~k~~T  413 (714)
                      =-.+|..+.|
T Consensus        81 g~~s~~~~~T   90 (94)
T d2dn7a1          81 GEEFEKEIRT   90 (94)
T ss_dssp             EEEEEEEEEC
T ss_pred             CCCccEEEee
Confidence            4456666665

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=7.5e-08  Score=78.20  Aligned_cols=87  Identities=15%  Similarity=0.199  Sum_probs=68.7

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  404 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  404 (714)
                      ..+++.+++++||+|-....+.....|.||.+.||.....  .....+.....+.+.|.||.|.|.|.|||.+++..|. 
T Consensus         5 ~~l~~~~~t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~-   81 (95)
T d2djsa1           5 PIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHN--EFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGY-   81 (95)
T ss_dssp             SCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSC--STTCEEEEESSSEEEEESCCTTCEEEEEEEEEESSCE-
T ss_pred             CccEEEeecCCEEEEEEEECCCCCcceEEeeeeeeeeccC--cceeEeecCCccEEEEeecCCccEEEEEEEEEcCCCC-
Confidence            3688999999999999988765556899999999987654  2233455667889999999999999999999999883 


Q ss_pred             cce--eeEEecC
Q 005110          405 GRC--EIWFSTG  414 (714)
Q Consensus       405 g~~--E~k~~T~  414 (714)
                      |.+  .+.+.|.
T Consensus        82 g~~S~~~~~~T~   93 (95)
T d2djsa1          82 GKFSGKMCFQTL   93 (95)
T ss_dssp             EEECCCEEEECC
T ss_pred             CCCCCCEEEEeC
Confidence            543  3445553

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=9.3e-08  Score=78.49  Aligned_cols=89  Identities=20%  Similarity=0.233  Sum_probs=71.5

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +..+++.+++.+||+|.+...+.....|.||.|.||......  .....+...++.+.|.||.|.|.|.|||.+++..|.
T Consensus         4 P~~~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~N~~G~   81 (93)
T d2vkwa2           4 PKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEW--KPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGK   81 (93)
T ss_dssp             CEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCC--CCCEEECTTCCEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred             CccCEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcce--eeeeeccCCceEEEEeccccceEEEEEEEEEcCCCC
Confidence            346789999999999999887655567999999999876642  234456778899999999999999999999999885


Q ss_pred             CcceeeEEecC
Q 005110          404 LGRCEIWFSTG  414 (714)
Q Consensus       404 lg~~E~k~~T~  414 (714)
                      =-.+++.+.|.
T Consensus        82 s~ps~~~~~T~   92 (93)
T d2vkwa2          82 SKAAHFVFRTA   92 (93)
T ss_dssp             CCCEEEEEECC
T ss_pred             cCCEeEEEEec
Confidence            44456666664

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=7.2e-08  Score=78.67  Aligned_cols=77  Identities=16%  Similarity=0.222  Sum_probs=61.5

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCcc
Q 005110          327 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGR  406 (714)
Q Consensus       327 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg~  406 (714)
                      +++.+|+++|++|-.+...   .++.||+|+|+.....-. .-...+..+.+.+.|.||.|.|+|.|+|.+++..|+-..
T Consensus         3 l~v~~~t~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~~-~~~~~~~~~~t~~~l~~L~p~t~Y~~~V~a~~~~g~s~~   78 (91)
T d1fnaa_           3 LEVVAATPTSLLISWDAPA---VTVRYYRITYGETGGNSP-VQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPA   78 (91)
T ss_dssp             CEEEEECSSCEEEECCCCS---SCCSEEEEEEEETTCCSC-CEEEEEETTCCEEEECSCCTTCEEEEEEEEECTTCCSSC
T ss_pred             CEEEEeCCCEEEEEEEccc---eEecEEEEEEEcCCCCce-eEEEEeCCCccEEEeCCCCCCCEEEEEEEEEeCCccCCC
Confidence            6788999999999997542   468999999998765411 112346788999999999999999999999999887443


Q ss_pred             e
Q 005110          407 C  407 (714)
Q Consensus       407 ~  407 (714)
                      .
T Consensus        79 ~   79 (91)
T d1fnaa_          79 S   79 (91)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.1e-07  Score=79.12  Aligned_cols=87  Identities=22%  Similarity=0.268  Sum_probs=67.1

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++..++++||+|..+........|.||+|+||.....    ....+....+.+.|+||.|.|+|.|+|.+++..|
T Consensus        13 ~P~~l~v~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~----~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   88 (103)
T d1x5ga1          13 PAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTD----KEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHG   88 (103)
T ss_dssp             CCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCC----CCCCEEECSSEEEECSCCTTCEEEEEEEEECSSC
T ss_pred             cCCCcEEEEccCCEEEEEEECCcCCCccEEEEEEEEEeCCCc----eeEEEeccccEEecCCCCCCCEEEEEEEEEcCCc
Confidence            344689999999999999986544445799999999987654    1223456788999999999999999999999987


Q ss_pred             cCcc-e-eeEEecC
Q 005110          403 ELGR-C-EIWFSTG  414 (714)
Q Consensus       403 elg~-~-E~k~~T~  414 (714)
                      . |. + .+.+.|.
T Consensus        89 ~-g~~S~~v~v~T~  101 (103)
T d1x5ga1          89 P-GVSTPDVAVRTL  101 (103)
T ss_dssp             C-CCBCCCCCEECC
T ss_pred             C-cCCCCCEEEEcC
Confidence            4 43 2 3555553

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=8.8e-08  Score=79.47  Aligned_cols=87  Identities=17%  Similarity=0.153  Sum_probs=64.4

Q ss_pred             ccCceEEEEEeecee-EEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          322 IVPNMVKFEDVRATS-LTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       322 ~~~~~~rFE~vt~tS-v~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      .++..++|.+++.+| |+|-++..  ...+|.||+|.|+.........-+..+...++.+.|.||.|.|+|.|+|.++++
T Consensus         3 ~PP~~l~v~~~~~ts~i~v~W~~p--~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~   80 (94)
T d1fnfa1           3 SPPTNLHLEANPDTGVLTVSWERS--TTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKD   80 (94)
T ss_dssp             CCCEEEEEEECSSSSCEEEEEECC--SCSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEEEEET
T ss_pred             CcCcCcEEEEecCCCEEEEEeeCC--CCCCeeEEEEEEEEecccCceEEEEEeCCCccEEEECCCCCCCEEEEEEEEEcC
Confidence            356679999998765 88988654  455699999999976543211222345667889999999999999999999998


Q ss_pred             CccCcceeeE
Q 005110          401 TTELGRCEIW  410 (714)
Q Consensus       401 ~~elg~~E~k  410 (714)
                      .|+-......
T Consensus        81 ~g~s~p~s~t   90 (94)
T d1fnfa1          81 DKESVPISDT   90 (94)
T ss_dssp             TEECCCEEEE
T ss_pred             CCEeCCEEEE
Confidence            8865444443

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.7e-07  Score=79.54  Aligned_cols=90  Identities=22%  Similarity=0.328  Sum_probs=67.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +-.+++..++++||.|.++........|.||.|+||.....-...-.-++....+.+.|.||.|.|.|.|||.++|..|.
T Consensus        24 P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~  103 (117)
T d1wfoa1          24 PMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGW  103 (117)
T ss_dssp             CCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEEECTTCCEEEEESCCSSSEEEEEEEEECSSCE
T ss_pred             CCCcEEEEecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeEEecCCceEEEEECCCCCCCEEEEEEEEECCCcC
Confidence            34589999999999999986654455799999999987665222333345566788999999999999999999998773


Q ss_pred             CcceeeEEec
Q 005110          404 LGRCEIWFST  413 (714)
Q Consensus       404 lg~~E~k~~T  413 (714)
                      =-.+|...+|
T Consensus       104 g~~S~~~~~t  113 (117)
T d1wfoa1         104 GEAAEALVVT  113 (117)
T ss_dssp             EEEEEEEEEC
T ss_pred             CCCcCCEEEE
Confidence            2234544443

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.4e-07  Score=81.96  Aligned_cols=81  Identities=16%  Similarity=0.082  Sum_probs=61.8

Q ss_pred             eeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceee--ecCCceeEeecCCcceeeeEEEEeccCCccCccee
Q 005110          332 VRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTL--FAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCE  408 (714)
Q Consensus       332 vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~--~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg~~E  408 (714)
                      |+++||.|-.+... ..+.|.||+|+||..... -..++..+-  ....+.++|.||.|.|+|.|||.+|+..|+=-.++
T Consensus        27 ~s~tsi~v~W~~p~-~~~~i~gY~v~y~~~~~~~~~~~~~~~~v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~~S~  105 (120)
T d1ujta_          27 LTPTTVQVTWTVDR-QPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSE  105 (120)
T ss_dssp             CBTTEEEEEEEESS-CCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCCCCC
T ss_pred             eCCCeEEEEecCCC-CCCcEEEEEEEeeecccCCCCcceEEEEeccCceeEEEECCCCCCCEEEEEEEEEeCCcCcCCCC
Confidence            78999999998664 346799999999998766 444554432  23477899999999999999999999988633455


Q ss_pred             eE-Eec
Q 005110          409 IW-FST  413 (714)
Q Consensus       409 ~k-~~T  413 (714)
                      .. +.|
T Consensus       106 ~~~~~T  111 (120)
T d1ujta_         106 SKTVRT  111 (120)
T ss_dssp             CEEEEE
T ss_pred             CEEEEe
Confidence            43 444

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.1e-07  Score=79.00  Aligned_cols=88  Identities=26%  Similarity=0.360  Sum_probs=68.1

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +..+++..++++||+|...........|.||.|+|+.......  -..++..+.+.+.|+||.|.|.|.|||.++++.| 
T Consensus         7 p~~~~~~~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~G-   83 (98)
T d1x5la1           7 VVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQ--SYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAG-   83 (98)
T ss_dssp             CCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCS--SCEEEEESSSEEEECSCCTTCEEEECEEEEETTE-
T ss_pred             CCceEEEeccCCEEEEEEECCCCCCCCEEEEEEEeecccccce--eeEEecCCceEEEECCCCCCCEEEEEEEEEcCCC-
Confidence            4468899999999999998765445679999999998765411  1224566789999999999999999999999988 


Q ss_pred             Ccc--eeeEEecC
Q 005110          404 LGR--CEIWFSTG  414 (714)
Q Consensus       404 lg~--~E~k~~T~  414 (714)
                      +|.  -++.+.|.
T Consensus        84 ~g~~S~~v~~~T~   96 (98)
T d1x5la1          84 CGRFSQAMEVETG   96 (98)
T ss_dssp             ECCCCCCEEEECC
T ss_pred             CcCCCCCEEEEcC
Confidence            353  34555553

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.9e-07  Score=75.68  Aligned_cols=88  Identities=14%  Similarity=0.100  Sum_probs=68.4

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      |.++.-++++.++++||.|-.+..   ..++.||.|.|+.....  ..-...+....+.+.|.||.|.|+|.|||.+++.
T Consensus         2 l~aP~n~~~~~~s~~si~l~W~~p---~~~~~~Y~i~y~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   76 (92)
T d1qg3a1           2 LGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDS--ESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGA   76 (92)
T ss_dssp             CCCCEEEEEEECSTTCEEEEEECC---SSCCCEEEEEEEETTSC--GGGCEEEEESSSEEEECSCCTTCEEEEEEEEECS
T ss_pred             CCcCCCCEEEEccCCEEEEEEEec---CCCccceEEeeeecccc--ccEEEEecCCccEEEECCCCCCcEEEEEEEEEeC
Confidence            556778999999999999999754   35689999999987654  2223456678889999999999999999999999


Q ss_pred             CccCcce-eeEEec
Q 005110          401 TTELGRC-EIWFST  413 (714)
Q Consensus       401 ~~elg~~-E~k~~T  413 (714)
                      .|.=-.+ .+.+.|
T Consensus        77 ~G~g~~S~~~~~~T   90 (92)
T d1qg3a1          77 QGEGPYSSLVSCRT   90 (92)
T ss_dssp             SCBCCCCCCEEEEC
T ss_pred             CcCcCCCCCEEEEc
Confidence            8752222 344544

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2e-07  Score=77.27  Aligned_cols=84  Identities=24%  Similarity=0.325  Sum_probs=65.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +..|+...++++||+|-....  ..+.|.||.|.||.....   ....+...+.+.+.|+||.|.|+|.|||.+++..|.
T Consensus        14 P~~~~~~~~~~~si~l~W~~p--~~~~i~~Y~i~y~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   88 (102)
T d1x5za1          14 PLNFKAEPESETSILLSWTPP--RSDTIANYELVYKDGEHG---EEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGL   88 (102)
T ss_dssp             CEEEEEECSSSSEEEEEEECC--SCCCCCEEEECBEESSSC---CCBCCEECSSSEEEEECCCTTCEEEECEEEECSSCE
T ss_pred             CCCeEEEEccCCEEEEEEECC--CCCCccceEEEEEeCCCC---ceEEEEcCCcCEEEECCCCCCCEEEEEEEEEcCCCE
Confidence            456999999999999998753  345799999999987554   223345567889999999999999999999999885


Q ss_pred             Ccce--eeEEec
Q 005110          404 LGRC--EIWFST  413 (714)
Q Consensus       404 lg~~--E~k~~T  413 (714)
                       |.+  ++.+.|
T Consensus        89 -g~~S~~v~~~T   99 (102)
T d1x5za1          89 -GASTAEISART   99 (102)
T ss_dssp             -EEECCCEEEEC
T ss_pred             -eCCCCCEEEEc
Confidence             433  345555

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2.8e-07  Score=77.75  Aligned_cols=90  Identities=18%  Similarity=0.241  Sum_probs=66.8

Q ss_pred             CceEEEEEeeceeEEEEeCcCC-CCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          324 PNMVKFEDVRATSLTVVLGSED-PSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      +--|++.+++++||+|-..... .....|.||.++||..... ......+.....+.++|.||.|.|.|.|||.+++..|
T Consensus        14 P~~l~~~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~p~t~Y~~rV~A~n~~G   92 (107)
T d1x5fa1          14 PRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIA-RERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHG   92 (107)
T ss_dssp             CEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCC-CCEEEECSSTTCSEEEECSCCTTCEEEEEEEEECSSC
T ss_pred             CCccEEEEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCC-ceEEEEEeCCCccEEEecCCCCCCEEEEEEEEEeCCC
Confidence            3459999999999999997643 2355799999999976553 2222334455678999999999999999999999988


Q ss_pred             cCc-ceeeEEecC
Q 005110          403 ELG-RCEIWFSTG  414 (714)
Q Consensus       403 elg-~~E~k~~T~  414 (714)
                      .-- .-++.+.|.
T Consensus        93 ~g~~S~~i~v~T~  105 (107)
T d1x5fa1          93 SGESSAPLRVETQ  105 (107)
T ss_dssp             EEEECCCEEEECC
T ss_pred             CcCCCCCEEEECC
Confidence            422 234666664

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2.1e-07  Score=77.65  Aligned_cols=87  Identities=20%  Similarity=0.194  Sum_probs=66.0

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..+++.+++++||+|.+.........|.||+|.|+..... .......+....+.+.|+||.|.|.|.|||.+++..|
T Consensus        13 ~p~~l~~~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   91 (106)
T d1wfna1          13 PVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRT-NTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKG   91 (106)
T ss_dssp             CCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCG-GGCCCEEECSSCCEEEEESCCTTCEEEEEEEEECSSC
T ss_pred             CCCCcEEEEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCC-cceEEEecCCCeeEEEEccCCCCCEEEEEEEEECCCC
Confidence            345689999999999999986544455699999999887653 1123335566678999999999999999999999987


Q ss_pred             cCcceeeE
Q 005110          403 ELGRCEIW  410 (714)
Q Consensus       403 elg~~E~k  410 (714)
                      .=-.++..
T Consensus        92 ~g~~s~~~   99 (106)
T d1wfna1          92 QGQVSAST   99 (106)
T ss_dssp             EEEEEEEE
T ss_pred             CcCCcCCE
Confidence            53233433

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=2.3e-07  Score=76.38  Aligned_cols=93  Identities=14%  Similarity=0.090  Sum_probs=72.4

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      .++--++.+.|++++|+|.+....+  ....|.||.|.||..... ....-+.++..+...+.|.||.|.|.|.|||.+|
T Consensus         3 ~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~   82 (101)
T d1x4ya1           3 AGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQCF   82 (101)
T ss_dssp             SCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred             CCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEEEcCCeeEEEEcCCCCCCEEEEEEEEE
Confidence            4566788999999999999987653  457899999999988765 4444444567788899999999999999999999


Q ss_pred             cCCccCccee-eEEecC
Q 005110          399 NGTTELGRCE-IWFSTG  414 (714)
Q Consensus       399 ~~~~elg~~E-~k~~T~  414 (714)
                      +..|+=--++ +.+.|+
T Consensus        83 n~~G~s~~S~~~~~~T~   99 (101)
T d1x4ya1          83 NEGGESEFSNVMICETK   99 (101)
T ss_dssp             CTTCCCCCCCCEEEECC
T ss_pred             cCCCCCCCCCcEEEEcc
Confidence            9988733333 344443

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=2.1e-07  Score=77.20  Aligned_cols=85  Identities=13%  Similarity=0.141  Sum_probs=69.1

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +-.+++.+|+++|+.|-+....   ..|.||.|.|+.....   .-+..+....+.+.|.||.|.|+|.|+|.++++.+.
T Consensus         4 P~~l~~~~~t~~si~l~W~~p~---~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~~~   77 (102)
T d2cuha1           4 PTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGAP---PLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNL   77 (102)
T ss_dssp             CEEEECCCCSSSCEEEEEECCS---SCCSEEEEEEECSSSC---CEEEEEETTCSEEEECSCCSSSEEEEEEEEEETTEE
T ss_pred             CCccEEEEeCCCEEEEEEEeee---ccceeeEEEEEecccc---ceeeeeeeeeeeEEEccEEeeEEEEEEEEEEeCCCC
Confidence            3468999999999999997542   4699999999876542   223456778899999999999999999999999887


Q ss_pred             CcceeeEEecC
Q 005110          404 LGRCEIWFSTG  414 (714)
Q Consensus       404 lg~~E~k~~T~  414 (714)
                      -...++.+.|.
T Consensus        78 s~~~~~~~~T~   88 (102)
T d2cuha1          78 TSPASITFTTG   88 (102)
T ss_dssp             CCCEEEEEESC
T ss_pred             cCCEEEEEECC
Confidence            77777777774

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.46  E-value=5.4e-07  Score=73.78  Aligned_cols=88  Identities=20%  Similarity=0.196  Sum_probs=70.7

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      .++-.+++.+|+++|++|-.+..   ...+.||++=|+....... .-..++..+.+++.|.||.|.|+|.|+|.++++.
T Consensus         5 ~~P~~l~v~~v~~~si~v~W~~p---~~~~~~y~i~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~   80 (93)
T d1tdqa1           5 DGPTQILVRDVSDTVAFVEWTPP---RAKVDFILLKYGLVGGEGG-KTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGT   80 (93)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECC---SSCCSEEEEEEEESSSSCC-CEEEEECTTCSEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CcCCCCEEEEeCCCEEEEEEEcc---ccCCCceEEEEEeccCcce-eeEEEeCCCceEEEEeCcccceEEEEEEEEEeCC
Confidence            35567999999999999999643   3579999998887766411 1234566778899999999999999999999999


Q ss_pred             ccCcceeeEEec
Q 005110          402 TELGRCEIWFST  413 (714)
Q Consensus       402 ~elg~~E~k~~T  413 (714)
                      |+=...+..+.|
T Consensus        81 g~s~~~~~~~tT   92 (93)
T d1tdqa1          81 NESDASSTQFTT   92 (93)
T ss_dssp             EECCCEEEEEEC
T ss_pred             CCcCCEEEEEEC
Confidence            987777777766

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.44  E-value=5.4e-07  Score=72.97  Aligned_cols=83  Identities=17%  Similarity=0.265  Sum_probs=67.0

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      |.++--+++.+++++|++|.....   ...+.||.|=|+....   .+....+....+++.|.||.|.|.|.|+|.++++
T Consensus         1 l~~P~nl~v~~~~~~s~~l~W~~p---~~~~~~Y~v~~~~~~~---~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~   74 (86)
T d1tdqa3           1 LDSPRDLMVTASSETSISLIWTKA---SGPIDHYRITFTPSSG---ISSEVTVPRDRTSYTLTDLEPGAEYIISITAERG   74 (86)
T ss_dssp             CCCCEEEEEEEECSSCEEEEEECC---CSCCSEEEEEEECSSS---CCEEEEEESSCSEEEECCCCTTCCEEEEEEEEET
T ss_pred             CccCCCCEEEEecCCEEEEEEeCC---CCCccceEEEEecccc---cceEEEeCCCccEEEECCCccccEEEEEEEEEcC
Confidence            345667999999999999999764   3579999998886654   2334566788999999999999999999999998


Q ss_pred             CccCcceee
Q 005110          401 TTELGRCEI  409 (714)
Q Consensus       401 ~~elg~~E~  409 (714)
                      .++-..+++
T Consensus        75 ~~~s~p~~~   83 (86)
T d1tdqa3          75 RQQSLESTV   83 (86)
T ss_dssp             TEECCCEEE
T ss_pred             CCEECCEEe
Confidence            886555444

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=4.7e-07  Score=74.79  Aligned_cols=89  Identities=16%  Similarity=0.181  Sum_probs=66.7

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  404 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  404 (714)
                      .+...++++++|+|-.+........|.||.+.|+..... ....-...+....+.+.|.||.|.|+|.|||.+++..|.=
T Consensus        19 ~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g   98 (111)
T d1x5ka1          19 TVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMG   98 (111)
T ss_dssp             EEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEEEESTTCSEEEECSCCSSSEEEEEEEEECSSCBC
T ss_pred             EEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEEEeCCCeeEEEECCCCCCCEEEEEEEEEcCCCCc
Confidence            344556788999999987655567899999999987766 4444445566677889999999999999999999988732


Q ss_pred             ccee-eEEecC
Q 005110          405 GRCE-IWFSTG  414 (714)
Q Consensus       405 g~~E-~k~~T~  414 (714)
                      -.+| +.+.|.
T Consensus        99 ~~S~~v~~~T~  109 (111)
T d1x5ka1          99 PMSEAVQFRTP  109 (111)
T ss_dssp             CCCCCEEEECC
T ss_pred             CCCCCEEEECC
Confidence            2334 444453

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=8.5e-07  Score=71.55  Aligned_cols=85  Identities=20%  Similarity=0.201  Sum_probs=65.6

Q ss_pred             eEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 005110          326 MVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  404 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  404 (714)
                      .+++.+++++||+|-...... ....|.+|.+++|.....  ..-..+.....+.+.|+||.|.|+|.|||.+++..|. 
T Consensus         6 ~~~v~~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~--~~~~~~~~~~~~~~~v~~L~p~t~Y~~rV~A~n~~G~-   82 (96)
T d1x5xa1           6 SPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSG--YGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGK-   82 (96)
T ss_dssp             CCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSS--CCCEEEEEESCSEEEEESCCSSCEEEEEEEEECSSCE-
T ss_pred             CCEEEEecCCEEEEEEEeecccCcceEeeeEEEeeeccce--eeeEEeecCCCCEEEECCCCCCCEEEEEEEEEcCCcE-
Confidence            467889999999999987543 456799999999876554  2233455677889999999999999999999999875 


Q ss_pred             cce--eeEEec
Q 005110          405 GRC--EIWFST  413 (714)
Q Consensus       405 g~~--E~k~~T  413 (714)
                      |.+  .+.+.|
T Consensus        83 s~~S~~~~~~T   93 (96)
T d1x5xa1          83 SNPSEVVEFTT   93 (96)
T ss_dssp             EEECCCEEEEC
T ss_pred             eCCCCCEEEEe
Confidence            432  345554

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=4.3e-07  Score=77.53  Aligned_cols=83  Identities=22%  Similarity=0.206  Sum_probs=60.8

Q ss_pred             Ccc-cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          320 NVI-VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       320 ~l~-~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      .+| ++-.+++.+|+++||+|-+.........|.||.|+||.....-. -.+.....+.+++.|.||.|.|.|.|||.++
T Consensus        14 ~~P~pP~~~~v~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~   92 (117)
T d1uema_          14 DLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNS-WQTVANHVKTTLYTVRGLRPNTIYLFMVRAI   92 (117)
T ss_dssp             CSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEE-EEEEEEEECSSEEEECSCCTTCEEEEEEEEE
T ss_pred             ccCcCCCCCEEEEccCCEEEEEEECCCcCCCCeEEEEEEEeccCCcee-eEEeccccccccceECCCCCCCEEEEEEEEE
Confidence            344 44578999999999999997544345579999998876543200 0111123467899999999999999999999


Q ss_pred             cCCcc
Q 005110          399 NGTTE  403 (714)
Q Consensus       399 ~~~~e  403 (714)
                      |..|.
T Consensus        93 N~~G~   97 (117)
T d1uema_          93 NPQGL   97 (117)
T ss_dssp             ETTEE
T ss_pred             eCCcC
Confidence            98764

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=1e-06  Score=72.12  Aligned_cols=87  Identities=15%  Similarity=0.193  Sum_probs=72.2

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCC--CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPS--PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s--~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      |.++-.++..+|+++||+|-.......  ...+.+|.+-|+.................++.+.|.||.|.|.|.|||-+.
T Consensus         3 l~pP~~l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra~   82 (104)
T d2b5ib2           3 LMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVK   82 (104)
T ss_dssp             CCCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECSCCTTCEEEEEEEEE
T ss_pred             cCCCCCcEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccceeeeEEecCCCcEEEEECCCCCCCEEEEEEEEE
Confidence            456778999999999999999777643  466789999998887665555566677788999999999999999999999


Q ss_pred             cCCccCcce
Q 005110          399 NGTTELGRC  407 (714)
Q Consensus       399 ~~~~elg~~  407 (714)
                      ++.|..|.|
T Consensus        83 ~~~g~~g~w   91 (104)
T d2b5ib2          83 PLQGEFTTW   91 (104)
T ss_dssp             ESCCSSCCC
T ss_pred             ECCCCCCCC
Confidence            988877764

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.3e-06  Score=71.80  Aligned_cols=89  Identities=19%  Similarity=0.304  Sum_probs=67.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCc---eeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPT---CTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept---~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      +-.+++..++++||+|.++........|.||.|.|+..... -...+.   .+....++.+.|.||.|.|+|.|||.+++
T Consensus         6 P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n   85 (103)
T d1qg3a2           6 PGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARN   85 (103)
T ss_dssp             CCCCEEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEECCTTCCEEEECCCCTTCCEEEEEEEEE
T ss_pred             CCCcEEEEecCCEEEEEEEECccCCCCceEEEEEeeccccccccccceEEEEecCCCceEEEEeecCCCCEEEEEEEEEc
Confidence            44689999999999999997665567899999999988665 222222   22356678899999999999999999999


Q ss_pred             CCccCc-ceeeEEec
Q 005110          400 GTTELG-RCEIWFST  413 (714)
Q Consensus       400 ~~~elg-~~E~k~~T  413 (714)
                      ..| .| ..|+.+.+
T Consensus        86 ~~G-~g~~s~~~v~~   99 (103)
T d1qg3a2          86 GAG-WGPEREAIINL   99 (103)
T ss_dssp             TTE-ECCCEEEEECG
T ss_pred             CCc-cCCCcccccEE
Confidence            877 44 34444443

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=1.2e-06  Score=72.86  Aligned_cols=73  Identities=22%  Similarity=0.300  Sum_probs=60.6

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      --+++++++++||+|-.+.... ....+.+|.+.|+...+.      .......++++|+||.|.|.|.|||.+|+..|+
T Consensus         7 ~~L~~~~~~~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~------~~~~~~~t~~~i~~L~p~t~Y~~rV~A~n~~G~   80 (94)
T d1x5aa1           7 LSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEE------WHQMVLEPRVLLTKLQPDTTYIVRVRTLTPLGP   80 (94)
T ss_dssp             CCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSCE------EEEEESSSEEEEESCCSSCEEEEEEEEECSSSC
T ss_pred             CceEEEEcCCCEEEEEEecccCCCCCcEEEEEEEEecCCce------EEEeeccCEEEECCCCCCCEEEEEEEEEcCCcC
Confidence            3578999999999999987653 566778999999987653      222345789999999999999999999999985

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.2e-06  Score=71.45  Aligned_cols=89  Identities=19%  Similarity=0.210  Sum_probs=65.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCC-C---CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          323 VPNMVKFEDVRATSLTVVLGSED-P---SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~-~---s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      ++-.+++.+++++||.|..+... +   ....+.+|.+.|+........  ..++....+.+.|.||.|.|+|.|||.+|
T Consensus         4 pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~   81 (100)
T d1x5ja1           4 PPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK--YKNANATTLSYLVTGLKPNTLYEFSVMVT   81 (100)
T ss_dssp             CCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCC--CEECCBCSSEEEEESCCTTCEECCEEEEE
T ss_pred             CCcCeEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcce--eEecCCCccEEEECCCCCCCEEEEEEEEE
Confidence            44569999999999999997643 1   235678899888877654222  22345567899999999999999999999


Q ss_pred             cCCccCccee-eEEec
Q 005110          399 NGTTELGRCE-IWFST  413 (714)
Q Consensus       399 ~~~~elg~~E-~k~~T  413 (714)
                      ++.|+=.-++ +.+.|
T Consensus        82 n~~g~s~~S~~~~~~T   97 (100)
T d1x5ja1          82 KGRRSSTWSMTAHGTT   97 (100)
T ss_dssp             CSSCBCCCCCCCCEEC
T ss_pred             eCCcCcCCCCeEEEEe
Confidence            9887633333 44444

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=98.33  E-value=1.1e-06  Score=72.56  Aligned_cols=78  Identities=13%  Similarity=0.201  Sum_probs=58.4

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      ..+++ .+++++++|-+.........|.||.+.||..................+.+.|.||.|.|.|.|||.++++.|.
T Consensus        10 ~~~~v-~~~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~frV~A~n~~G~   87 (100)
T d1cfba1          10 KLTGI-TCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGA   87 (100)
T ss_dssp             EEEEE-EECSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEEECCSSEEEEEEEEEEETTEE
T ss_pred             cCcEE-EEcCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeeecCCceEEEEecCCCCCEEEEEEEEEeCCcC
Confidence            34666 4688999998865543456799999999977654222333334556788999999999999999999998774

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.33  E-value=1e-06  Score=74.56  Aligned_cols=79  Identities=18%  Similarity=0.103  Sum_probs=59.0

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      ..+++.+++++||+|-+.-.......|.||.|-||..... --..-+..+...++.+.|.||.|.|+|.|||.+++..|.
T Consensus        15 ~~~~v~~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~   94 (108)
T d1x4za1          15 DRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGE   94 (108)
T ss_dssp             CCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEEEEEEEETTEE
T ss_pred             CCCEEEEccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEEeecCCccEEEECCCCCCCEEEEEEEEECCCcC
Confidence            3577899999999999953333345699999988876553 111122234556778999999999999999999987764

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=4.7e-07  Score=76.98  Aligned_cols=88  Identities=20%  Similarity=0.259  Sum_probs=67.6

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCC--CCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPS--PGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s--~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      +-.|++..++++||.|-++.....  ...|.||+|.||..... ...+  .++...++.++|+||.|.|.|.|||.+|+.
T Consensus        15 P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~~~~~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   92 (119)
T d1x5ha1          15 PQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTE--TLVSGTQLSQLIEGLDRGTEYNFRVAALTI   92 (119)
T ss_dssp             CEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEEC--CBCCTTCCEEEEECCCSSCEEEEECEEEET
T ss_pred             CcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeecccccceee--eecCCCccEEEeCCCCCCCEEEEEEEEEcC
Confidence            457999999999999999876532  34799999999987654 2211  134556788999999999999999999999


Q ss_pred             CccCcce--eeEEecC
Q 005110          401 TTELGRC--EIWFSTG  414 (714)
Q Consensus       401 ~~elg~~--E~k~~T~  414 (714)
                      .|. |.+  .+.+.|.
T Consensus        93 ~G~-G~~S~~~~~~T~  107 (119)
T d1x5ha1          93 NGT-GPATDWLSAETF  107 (119)
T ss_dssp             TEE-EEECCCEEEECC
T ss_pred             CcC-CCCCCCEEEEeC
Confidence            885 533  3566663

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=3.4e-07  Score=76.08  Aligned_cols=82  Identities=15%  Similarity=0.160  Sum_probs=59.2

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCC-CCCCCcee-eecCCceeEeecCCcceeeeEEEEec
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEG-FPARPTCT-LFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~-y~~ept~~-~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      |.+..+..-+++++||+|-+...... ...|.||.|.||..... ....-..+ ....++.+.|+||.|.|.|.|||.++
T Consensus         3 P~~P~~~~~~~~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~   82 (101)
T d2haza1           3 PSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAAL   82 (101)
T ss_dssp             CCCCEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEEEEE
T ss_pred             CcCCccCEEEeeCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeeeecccceeEEEecCCCCCeEEEEEEEEE
Confidence            34445666678999999998876543 34599999999987654 21111111 12345789999999999999999999


Q ss_pred             cCCcc
Q 005110          399 NGTTE  403 (714)
Q Consensus       399 ~~~~e  403 (714)
                      +..|.
T Consensus        83 N~~G~   87 (101)
T d2haza1          83 NGKGL   87 (101)
T ss_dssp             ETTEE
T ss_pred             eCCcC
Confidence            98774

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=5e-07  Score=76.24  Aligned_cols=81  Identities=17%  Similarity=0.246  Sum_probs=60.2

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      |.+..+.+.+++++||+|-......-...|.||.|.||.....+. .....+....+.+.|+||.|.|.|.|||.+++..
T Consensus        14 P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~N~~   92 (108)
T d1wf5a1          14 PEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWT-VLLASVDPKATSVTVKGLVPARSYQFRLCAVNDV   92 (108)
T ss_dssp             CSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCE-EEESSCCTTCCEEEEESCCTTCEEEEEEEEEESS
T ss_pred             CCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCce-EEeeeecCCccEEEECCCCCCCEEEEEEEEEcCC
Confidence            334467888999999999987654334569999999998755311 1111234456789999999999999999999987


Q ss_pred             cc
Q 005110          402 TE  403 (714)
Q Consensus       402 ~e  403 (714)
                      |.
T Consensus        93 G~   94 (108)
T d1wf5a1          93 GK   94 (108)
T ss_dssp             CE
T ss_pred             cC
Confidence            73

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1e-06  Score=72.81  Aligned_cols=79  Identities=18%  Similarity=0.247  Sum_probs=61.7

Q ss_pred             eEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          326 MVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      .+++.+|+++||+|-...... -...|.+|.+.++..... ..  .......+...+.|+||.|.|+|.|||.+++..|+
T Consensus         8 ~p~~~~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~G~   85 (104)
T d1bpva_           8 KPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWL--KANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGA   85 (104)
T ss_dssp             CCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCE--ECCCSCCCSSEEEECSCCSSCCEEEEEEEECTTSC
T ss_pred             CCEEEEecCCEEEEEEEeccccCcceEEEEEEEeeccccccee--EEEeeccceeEEEEcCCCCCCEEEEEEEEEECCCC
Confidence            456789999999999986432 345699999999987665 21  11123456788999999999999999999999998


Q ss_pred             Ccc
Q 005110          404 LGR  406 (714)
Q Consensus       404 lg~  406 (714)
                      .|.
T Consensus        86 ~s~   88 (104)
T d1bpva_          86 ISP   88 (104)
T ss_dssp             EEE
T ss_pred             CCC
Confidence            774

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=1.8e-06  Score=71.95  Aligned_cols=90  Identities=19%  Similarity=0.289  Sum_probs=68.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ++..++..++++++|+|.+.........|.+|.|.+|.....  .....+...+++.+.|.+|.|.|+|.|||.++++.|
T Consensus        13 ~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~--~~~~~~~~~~~~~~~~~~L~p~t~Y~frV~A~N~~G   90 (105)
T d1x3da1          13 IPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN--GEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYG   90 (105)
T ss_dssp             CCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSS--SCCEEEEEESCSEEEEESCCTTCEEEEECCEEESSC
T ss_pred             CCCCCEEEEccCCEEEEEEECCCCCcCccEEEEEEEecCCCc--ceeEEEecCCccEEEecCCcCCcEEEEEEEEECCCe
Confidence            345678899999999999987654556799999999866543  344555677899999999999999999999999988


Q ss_pred             cCcce-eeEEecC
Q 005110          403 ELGRC-EIWFSTG  414 (714)
Q Consensus       403 elg~~-E~k~~T~  414 (714)
                      .=..+ .+.+.|.
T Consensus        91 ~s~~S~~~~~~T~  103 (105)
T d1x3da1          91 TSGFSEEVLYYTS  103 (105)
T ss_dssp             BCCCCCCEEEECS
T ss_pred             EcCCCCcEEEECC
Confidence            42222 4455553

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.27  E-value=2e-06  Score=73.70  Aligned_cols=91  Identities=14%  Similarity=0.228  Sum_probs=67.7

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCC---CC-----------ceeeecCCceeEeecCCccee
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPA---RP-----------TCTLFAPNTRFVVTGLCPATE  390 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~---ep-----------t~~~~~p~~r~~vs~L~P~TE  390 (714)
                      -.|+++. +++||+|..+........|+||.|+||........   .+           ...+..+.+++.|.+|.|.|.
T Consensus        12 ~~v~v~~-~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~   90 (123)
T d1wfta_          12 STVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDYTSRPA   90 (123)
T ss_dssp             EEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCBCSSSCE
T ss_pred             cccEEEe-CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcCCCCCCE
Confidence            3577765 78999999997664455799999999887665211   11           133455678889999999999


Q ss_pred             eeEEEEeccCCccCcceeeEEecCcc
Q 005110          391 YQFKVVSSNGTTELGRCEIWFSTGSS  416 (714)
Q Consensus       391 Y~fkvvsF~~~~elg~~E~k~~T~s~  416 (714)
                      |.|||.++|..|.=-.+|++.++-..
T Consensus        91 Y~frV~A~N~~G~Gp~S~~~~~~t~~  116 (123)
T d1wfta_          91 IVFRISAKNEKGYGPATQIRWLQGNS  116 (123)
T ss_dssp             EEEEEEEBSSSSBCCCEEEEEECCSC
T ss_pred             EEEEEEEecCCcCCCCCCcEEEEecC
Confidence            99999999998844456888776533

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=4.9e-07  Score=77.31  Aligned_cols=78  Identities=12%  Similarity=0.146  Sum_probs=60.9

Q ss_pred             eEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCC---CCc------------------eeeecCCceeEe
Q 005110          326 MVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPA---RPT------------------CTLFAPNTRFVV  382 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~---ept------------------~~~~~p~~r~~v  382 (714)
                      .|...+++++||+|-.+.... ....|.||.|.||..... -..   .+.                  .......+.+.|
T Consensus         7 nl~~~~~sstsv~lsW~pP~~~~~~~i~gY~I~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (125)
T d2dtge3           7 KFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLM   86 (125)
T ss_dssp             CCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEE
T ss_pred             EEEEEEecCCEEEEEEeCCCccCCCcEEEEEEEEEECCCCceEEEeeccccCCcccceecccCcceeeeecCCccCEEEE
Confidence            577889999999999986553 357899999999987654 221   111                  122346788999


Q ss_pred             ecCCcceeeeEEEEeccCCcc
Q 005110          383 TGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       383 s~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +||.|.|.|.|+|.+|+..|+
T Consensus        87 ~~L~p~T~Y~~~V~A~n~~G~  107 (125)
T d2dtge3          87 RGLKPWTQYAIFVKTLVTFSD  107 (125)
T ss_dssp             CSCCSSCBCCBEEEECCCCCS
T ss_pred             CCCccCCEEEEEEEEEeCCCc
Confidence            999999999999999999997

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2.7e-06  Score=69.19  Aligned_cols=73  Identities=18%  Similarity=0.191  Sum_probs=60.0

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          327 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       327 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +++..++++||+|-.+........|.||.|.++.....+    ..++....+.+.|+||.|.|+|.|||.+++..|.
T Consensus         7 ~~v~~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~----~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   79 (93)
T d1x4xa1           7 PQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSM----QICYCGPGLSYEIKGLSPATTYYCRVQALSVVGA   79 (93)
T ss_dssp             CCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSC----CEEEEESCSEEEEESCCSSCEEEEEEEEECSSCC
T ss_pred             CEEEEeCCCeEEEEEEecccCCCeeEEEEEEEccCCCcc----eEeecCCccEEEEcccceeeEEEEEEEEEECCcC
Confidence            456789999999999866544567999999998765532    2356778999999999999999999999998874

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.23  E-value=1.5e-06  Score=72.34  Aligned_cols=78  Identities=22%  Similarity=0.206  Sum_probs=59.5

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      +..+.+.+++++||+|-+.-.... ...|.||.|=||..... +..  ........+.|.|+||.|.|+|.|||.+++..
T Consensus         5 P~~~~v~~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~--~~~~~~~~~~~~v~~L~~~~~Y~frV~A~n~~   82 (98)
T d1x5ya1           5 PQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVP--ANKEPVERCGFTVKDLPTGARILFRVVGVNIA   82 (98)
T ss_dssp             CEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEE--SSSSCBSSSEEEEECCCTTCCEEEEEEEEETT
T ss_pred             CcCcEEEEccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEE--eeeecCceeEEEECCCcCCeEEEEEEEEECCC
Confidence            446889999999999999754332 45699999988776554 211  11234567899999999999999999999877


Q ss_pred             cc
Q 005110          402 TE  403 (714)
Q Consensus       402 ~e  403 (714)
                      |.
T Consensus        83 G~   84 (98)
T d1x5ya1          83 GR   84 (98)
T ss_dssp             EE
T ss_pred             cC
Confidence            63

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.22  E-value=1.5e-06  Score=74.15  Aligned_cols=88  Identities=19%  Similarity=0.110  Sum_probs=64.6

Q ss_pred             eEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          326 MVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      .+++.+|+++||+|.++.... -...|.||.|.||..... -...-.-+.....+.++|.||+|.|+|.|||.+++..|.
T Consensus        21 ~p~v~~vt~~sv~l~W~~P~~~~g~~i~~y~i~y~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~  100 (120)
T d1wfua_          21 PPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGE  100 (120)
T ss_dssp             CCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCEEEEEEEEECSSSC
T ss_pred             CCEEeEecCCEEEEEEECCcccCcccccceeeeeeeecccccccceeeeccccccEEeCCCCCCCcEeeEEEEEEeCCcE
Confidence            345678999999999987543 356799999999864333 222223344566789999999999999999999999985


Q ss_pred             Ccc-ee-eEEecC
Q 005110          404 LGR-CE-IWFSTG  414 (714)
Q Consensus       404 lg~-~E-~k~~T~  414 (714)
                       |. +| +.+.|.
T Consensus       101 -s~~S~~~~~~T~  112 (120)
T d1wfua_         101 -YEYSPVVSVATT  112 (120)
T ss_dssp             -EEECCCEEEECC
T ss_pred             -eCCCCCEEEEeC
Confidence             43 34 455554

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=3.8e-06  Score=68.77  Aligned_cols=88  Identities=17%  Similarity=0.188  Sum_probs=65.0

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCC------ceeeecCCceeEeecCCcceeeeEEE
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARP------TCTLFAPNTRFVVTGLCPATEYQFKV  395 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ep------t~~~~~p~~r~~vs~L~P~TEY~fkv  395 (714)
                      ..-.+++.+|+++||+|-++-   ...++.+|.|-|+..... ....+      ...+......+.|.||+|.|.|.|+|
T Consensus         6 ~~~~l~v~~~t~~sv~v~W~p---p~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~~~V   82 (101)
T d2cuia1           6 RLSQLSVTDVTTSSLRLNWEA---PPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSLTL   82 (101)
T ss_dssp             CCCCCEEESCCSSCEEEECCC---CTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEEEE
T ss_pred             CCCCcEEEEECCCEEEEEEEe---ccccccceEEEEEecCCCceeeccCCcceeEeecccceeEEEeCCCCcCCEEEEEE
Confidence            335689999999999999963   236799999988877544 21111      12345677899999999999999999


Q ss_pred             EeccCCccCcceeeEEec
Q 005110          396 VSSNGTTELGRCEIWFST  413 (714)
Q Consensus       396 vsF~~~~elg~~E~k~~T  413 (714)
                      -+|++.|.=...++...|
T Consensus        83 ~a~~~~g~g~~~~~~~~T  100 (101)
T d2cuia1          83 YGLRGPHKADSIQGTART  100 (101)
T ss_dssp             EEECSSSEEEEEEEEEEC
T ss_pred             EEEeCCcEeCCeEEEeEE
Confidence            999998864444444443

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=3.6e-06  Score=69.28  Aligned_cols=84  Identities=18%  Similarity=0.196  Sum_probs=64.7

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCcee--eecCCceeEeecCCcceeeeEEEEe
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCT--LFAPNTRFVVTGLCPATEYQFKVVS  397 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~--~~~p~~r~~vs~L~P~TEY~fkvvs  397 (714)
                      ++-.|+.+.++++||+|-......  ....|.||.+.||..... ........  .....+.+.|+||.|.|.|.|||.+
T Consensus        11 pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a   90 (109)
T d1va9a1          11 PPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQA   90 (109)
T ss_dssp             CCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSSCCEEEEEEE
T ss_pred             CCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeeeEEecCCCeeEEEECCCCcceEEEEEEEE
Confidence            344689999999999999987653  346899999999988766 32222222  2345689999999999999999999


Q ss_pred             ccCCccCcce
Q 005110          398 SNGTTELGRC  407 (714)
Q Consensus       398 F~~~~elg~~  407 (714)
                      ++..|. |.+
T Consensus        91 ~n~~G~-g~~   99 (109)
T d1va9a1          91 FNRAGT-GPS   99 (109)
T ss_dssp             EETTEE-CCC
T ss_pred             EcCCcC-CCC
Confidence            999885 543

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=9.8e-07  Score=74.26  Aligned_cols=77  Identities=17%  Similarity=0.252  Sum_probs=57.9

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      --+.+ ..++++|+|-.+........|.||.|.||........ -.-.+....+.+.|.||.|.|+|.|||.+|++.|.
T Consensus        12 ~~~~~-~~t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~g~   88 (108)
T d1v5ja_          12 RGLVA-VRTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEV-LDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSFV   88 (108)
T ss_dssp             EEEEE-EECSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCEE-EEEEECSSCCEEECCCCCTTSCEECCBEEEETTEE
T ss_pred             CCeEE-EEcCCEEEEEEEecccCCCceeEEEEEeeeeeeeeee-ccccccceeeeEEEEeccCCcEEEEEEEEEeCCCE
Confidence            33444 6799999999987654455799999999987543111 01134557889999999999999999999998875

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=98.19  E-value=2e-06  Score=71.85  Aligned_cols=81  Identities=15%  Similarity=0.101  Sum_probs=60.2

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      +-.|+.+.++++||+|-.....+  ....|.||+|-||.....-.....-+.....+.+.|.||.|.|+|.|||.+||..
T Consensus         8 P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~N~~   87 (105)
T d1cfba2           8 PDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDR   87 (105)
T ss_dssp             CSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEECCTTCCEEEECSCCSSCEEEEEEEEEETT
T ss_pred             CcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEEEecCCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            44688999999999999976543  2357999999998775431111111123446789999999999999999999987


Q ss_pred             ccC
Q 005110          402 TEL  404 (714)
Q Consensus       402 ~el  404 (714)
                      |+=
T Consensus        88 G~g   90 (105)
T d1cfba2          88 GES   90 (105)
T ss_dssp             EEC
T ss_pred             cCC
Confidence            763

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=2.4e-06  Score=70.97  Aligned_cols=80  Identities=15%  Similarity=0.108  Sum_probs=61.0

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCc----eeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPT----CTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept----~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      +..+++.+++++||+|-..........|.+|.+.|+...........    .......+.+.|.||.|.|.|.|||.+++
T Consensus        14 P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N   93 (111)
T d1wisa1          14 PTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVN   93 (111)
T ss_dssp             CEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCEEEC
T ss_pred             CCCCEEEEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeeecccceeEEEeCCCCCCCEEEEEEEEEc
Confidence            44789999999999999975544457799999999876654222211    12244567899999999999999999999


Q ss_pred             CCcc
Q 005110          400 GTTE  403 (714)
Q Consensus       400 ~~~e  403 (714)
                      ..|.
T Consensus        94 ~~G~   97 (111)
T d1wisa1          94 IVGT   97 (111)
T ss_dssp             SSCB
T ss_pred             CCcC
Confidence            8763

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=2.3e-06  Score=73.02  Aligned_cols=85  Identities=16%  Similarity=0.137  Sum_probs=67.3

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +..|++.+++.+||+|.+.........|.+|.+=|+.........-+.......+.+.|.||+|.|+|.|||.+|+..|+
T Consensus        20 P~~~~v~~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~G~   99 (127)
T d1ueya_          20 PFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGK   99 (127)
T ss_dssp             CEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCEEEECCCTTCEECCEEEEEESSCB
T ss_pred             CCCcEEEEecCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEeecCCceEEEECCCccCCEEEEEEEEEcCCcC
Confidence            44689999999999999976555566789999988766554444445666778899999999999999999999999875


Q ss_pred             Cccee
Q 005110          404 LGRCE  408 (714)
Q Consensus       404 lg~~E  408 (714)
                      =..++
T Consensus       100 s~~S~  104 (127)
T d1ueya_         100 SLPSE  104 (127)
T ss_dssp             CCCCS
T ss_pred             cCCcC
Confidence            33344

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=4.2e-06  Score=69.77  Aligned_cols=70  Identities=16%  Similarity=0.229  Sum_probs=56.9

Q ss_pred             EeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          331 DVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       331 ~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      .++++||+|-....... ...|.+|.|.+|....   .+...+.....+.++|.||.|.|+|.|||.+++..|.
T Consensus        13 ~~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~   83 (97)
T d2crza1          13 RPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEK---DEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGF   83 (97)
T ss_dssp             CCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTS---CCCEEEEEESCSEEEEESCCTTCEEEECCEEECSSCB
T ss_pred             eeeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcC---CceeEeecCCceEEEEcCCCCCEEEEEEEEEecCCeE
Confidence            57789999999865433 3469999999998765   3445566777889999999999999999999999874

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

Probab=98.10  E-value=5.5e-06  Score=67.56  Aligned_cols=73  Identities=16%  Similarity=0.299  Sum_probs=57.2

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +-.+++.+|+++||+|-..... ....|.||.+++...         .+.....+.|.|.||.|.|+|.|+|.+++..|.
T Consensus         7 P~~l~~~~~~~~sv~lsW~~p~-~~~~i~~Y~i~~~~~---------~~~~~~~t~~~~~~L~p~t~Y~~~V~A~n~~G~   76 (88)
T d1k85a_           7 PTNLASTAQTTSSITLSWTAST-DNVGVTGYDVYNGTA---------LATTVTGTTATISGLAADTSYTFTVKAKDAAGN   76 (88)
T ss_dssp             CEEEEEEEECSSCEEEEEECCS-CCSSEEEEEEEESSS---------EEEEESSSEEEECCCCSSCEEEEEEEEEETTTE
T ss_pred             CCCcEEEEecCCEEEEEEeCCC-CCCCEEEEEEEccce---------EEEecCCCEEEECCCCCCCEEEEEEEEEECCCC
Confidence            4468999999999999996432 234699999975322         234456789999999999999999999999885


Q ss_pred             Ccc
Q 005110          404 LGR  406 (714)
Q Consensus       404 lg~  406 (714)
                      .|.
T Consensus        77 ~s~   79 (88)
T d1k85a_          77 VSA   79 (88)
T ss_dssp             ECC
T ss_pred             cCC
Confidence            553

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=4.6e-06  Score=70.02  Aligned_cols=86  Identities=17%  Similarity=0.205  Sum_probs=63.7

Q ss_pred             eEEEEEe--eceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          326 MVKFEDV--RATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rFE~v--t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      .+.+-++  +++|++|-++..+  ...|.||.|=||.....-+.. ...+....+.+.|.||.|.|+|.|+|.+++..|.
T Consensus         5 ~~~vt~~~~~~~s~~vsW~~P~--~~~i~~Y~i~y~~~~~~~~~~-~~~v~~~~~~~~l~gL~P~t~Y~v~v~av~~~G~   81 (93)
T d1owwa_           5 EVFITETPSQPNSHPIQWNAPQ--PSHISKYILRWRPKNSVGRWK-EATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGH   81 (93)
T ss_dssp             EEECCCCSSCTTCEEEEEECCS--SSCEEEEEEEEEETTCSSCCE-EEEECSSCCEEEECSCCSSEEEEEEEEEEESSSC
T ss_pred             ccEEEEccCCCCEEEEEeeccc--ccceeEEEEEEeeccccceee-eeccCCCccEEEECCcccCcEEEEEEEEEeCCCc
Confidence            4444555  4579999998754  346999999998765431111 2345667788999999999999999999999887


Q ss_pred             CcceeeEEecC
Q 005110          404 LGRCEIWFSTG  414 (714)
Q Consensus       404 lg~~E~k~~T~  414 (714)
                      =-..+..+.|.
T Consensus        82 s~~~~~~~tT~   92 (93)
T d1owwa_          82 QEVTRFDFTTT   92 (93)
T ss_dssp             EEEEEEEEEEC
T ss_pred             cCcEEEEEEec
Confidence            66666666664

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.07  E-value=3.5e-06  Score=70.47  Aligned_cols=77  Identities=12%  Similarity=0.141  Sum_probs=52.9

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC--CC---------CCCceeeecCCceeEeecCCcceeeeEEE
Q 005110          327 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG--FP---------ARPTCTLFAPNTRFVVTGLCPATEYQFKV  395 (714)
Q Consensus       327 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~--y~---------~ept~~~~~p~~r~~vs~L~P~TEY~fkv  395 (714)
                      .++.+|+++||+|...........|+||.|=||.....  +.         ...........+.+.|+||.|.|.|.|||
T Consensus         6 p~v~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV   85 (107)
T d2ic2a1           6 PNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRI   85 (107)
T ss_dssp             CEEEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEE
T ss_pred             CEEEEEECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEE
Confidence            46889999999999987654456799999977754332  10         11111223445679999999999999999


Q ss_pred             EeccCCcc
Q 005110          396 VSSNGTTE  403 (714)
Q Consensus       396 vsF~~~~e  403 (714)
                      .+++..|+
T Consensus        86 ~A~N~~G~   93 (107)
T d2ic2a1          86 LAVYSNND   93 (107)
T ss_dssp             EEEETTSC
T ss_pred             EEEcCCCC
Confidence            99997765

>d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.1e-05  Score=68.10  Aligned_cols=87  Identities=14%  Similarity=0.056  Sum_probs=64.1

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +..+++. .+.++|+|-+.........|.||.|-|+.....   .-+.++....++|.|.+|.|.|.|.|||.++++.|.
T Consensus        24 P~~~~~~-~~~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   99 (113)
T d1x5ia1          24 PSSLHVR-PLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPH---AQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGE   99 (113)
T ss_dssp             CSEEEEE-EETTEEEEEEECCSCTTBCCCEEEEEECSSCGG---GEEEECCTTCCEEEECSCCSSCEECCEEEEECSSCB
T ss_pred             CEeeeee-eCCCEEEEEEEccccCCccEEEEEEEeeecccc---ceeeeeeCCccEEEEeccccCcEEEEEEEEECCCcC
Confidence            3457775 467899999886544455799999998877554   113345667889999999999999999999999885


Q ss_pred             CcceeeEEecC
Q 005110          404 LGRCEIWFSTG  414 (714)
Q Consensus       404 lg~~E~k~~T~  414 (714)
                      =-...+.+.|+
T Consensus       100 g~~~~~~~~T~  110 (113)
T d1x5ia1         100 GIPLYESAVTR  110 (113)
T ss_dssp             CCCCCCCEECC
T ss_pred             CCCeeeEEEeC
Confidence            33345555554

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.7e-05  Score=65.76  Aligned_cols=75  Identities=11%  Similarity=0.151  Sum_probs=59.3

Q ss_pred             EEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          327 VKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       327 ~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      +.+..+++++|+|-...... ....+.+|.+.++.....  ..-..+....++.+.|.||+|.|+|.|||.+++..|.
T Consensus        18 ~~~~~~~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~   93 (107)
T d2crma1          18 SVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNG--NKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQ   93 (107)
T ss_dssp             EEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSS--CCCEEEECSSCSEEEECSCCTTSCEEEEEEEEETTEE
T ss_pred             EEEeeecCCEEEEEEEECccCCcceEEEEEEEEEeecCC--CcEEEeecCCccEEEEeccCCCCEEEEEEEEECCCcC
Confidence            66789999999999986442 345699999998876553  2223345667889999999999999999999998885

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=3.4e-06  Score=70.62  Aligned_cols=78  Identities=18%  Similarity=0.239  Sum_probs=58.2

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      .+...+++++||+|-..........+.+|.|-||..... ...........+++.+.|+||.|.|.|.|||.+++..|.
T Consensus        12 ~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~a~~~~G~   90 (115)
T d1bqua2          12 SVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGK   90 (115)
T ss_dssp             EEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETTSC
T ss_pred             EEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeeccccccccccccEEeeCCCccCcEEEEEEEEEeCCCc
Confidence            345557889999999876443345689999999987665 333334445667789999999999999999999998774

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=5.6e-06  Score=68.83  Aligned_cols=78  Identities=15%  Similarity=0.093  Sum_probs=55.6

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      ...+..+++++|+|-..........+.+|.|=||.....-.-.....+..+.+.+.|+||.|.|.|.|||.+++..|.
T Consensus        12 ~p~~~~~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frVra~n~~g~   89 (105)
T d2d9qb2          12 SPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLP   89 (105)
T ss_dssp             -------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSC
T ss_pred             CCEeecCCCCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeecccCCcceeEEecccCCeEEEEEEEEEeCCCC
Confidence            456678899999999986654556799999999987654211222235667889999999999999999999887764

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=2.6e-05  Score=65.49  Aligned_cols=91  Identities=23%  Similarity=0.307  Sum_probs=67.1

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC--CCCCCce----eeecCCceeEeecCCcceeeeEE
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG--FPARPTC----TLFAPNTRFVVTGLCPATEYQFK  394 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~--y~~ept~----~~~~p~~r~~vs~L~P~TEY~fk  394 (714)
                      ++..|+++.+++++|+|-.+....  ....|.+|.+=|+.....  .....+.    ++....+.+.|.||.|.|.|.||
T Consensus        17 ~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~   96 (125)
T d1uena_          17 APGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLN   96 (125)
T ss_dssp             CCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEESCCSSCEEEEE
T ss_pred             CCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEeCCCccEEEECCCCCCCEEEEE
Confidence            355799999999999999977642  346789999888766444  3332222    34557789999999999999999


Q ss_pred             EEeccCCccCcce--eeEEecC
Q 005110          395 VVSSNGTTELGRC--EIWFSTG  414 (714)
Q Consensus       395 vvsF~~~~elg~~--E~k~~T~  414 (714)
                      |.+++..|+ |.+  .+.+.|.
T Consensus        97 V~A~n~~G~-g~~S~~~~~~T~  117 (125)
T d1uena_          97 VRVVNGKGE-GPASPDRVFNTP  117 (125)
T ss_dssp             EEEEESSCE-EEECCCEEEECC
T ss_pred             EEEEeCCcc-cCCCCCEEEECC
Confidence            999999986 433  3555553

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=1.7e-05  Score=68.70  Aligned_cols=85  Identities=15%  Similarity=0.207  Sum_probs=61.0

Q ss_pred             EEEEeeceeEEEEeCcCCCC---------CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          328 KFEDVRATSLTVVLGSEDPS---------PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       328 rFE~vt~tSv~vvL~~~~~s---------~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      .+.+|+++||+|-++.....         ...+.+|.+.++.....  ..-..++....+++.|+||+|.|+|.|+|.++
T Consensus        25 ~V~~v~~~sv~l~W~~P~~~~~~~~~~~~~~~~~~y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~P~t~Y~f~V~A~  102 (137)
T d1wk0a_          25 VASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKD--GKYKSVYVGEETNITLNDLKPAMDYHAKVQAE  102 (137)
T ss_dssp             EEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTT--SCCEEEEEESCSEEEECSCCTTCEECEEEEEE
T ss_pred             EEEEeEcCEEEEEEeCcCcCCCceeeccccceEEeeEEEEeeCCCC--ccEEEEEecCccEEEECCCCCCcEEEEEEEEE
Confidence            45689999999998764321         24678899988765442  22233556688899999999999999999999


Q ss_pred             cCCccCccee-eEEecC
Q 005110          399 NGTTELGRCE-IWFSTG  414 (714)
Q Consensus       399 ~~~~elg~~E-~k~~T~  414 (714)
                      ++.|+=-.++ +.+.|.
T Consensus       103 n~~G~g~~S~~~~~~T~  119 (137)
T d1wk0a_         103 YNSIKGTPSEAEIFTTL  119 (137)
T ss_dssp             ETTEECCCCCCCCEECC
T ss_pred             cCCcccCCCCCEEEECC
Confidence            9987522234 335554

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=1.8e-05  Score=66.25  Aligned_cols=78  Identities=14%  Similarity=0.057  Sum_probs=55.2

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          326 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       326 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      .......++++|+|..+........+.+|.|=||.....-.-+....+..+.+.|.|+||.|.|+|.|||-+.+..|.
T Consensus        13 ~p~~~~~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~~~~~~~~~~l~~L~p~t~Y~frVra~~~~g~   90 (106)
T d1cd9b2          13 GPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLP   90 (106)
T ss_dssp             -------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSC
T ss_pred             CCeEecCCCCEEEEEEcCcccCCccceEEEEEEeeccccccceeeecccCCceEEEEeccCCCeEEEEEEEEEeCCCC
Confidence            445667889999999976554566689999999875443122223345667899999999999999999999888664

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=2.6e-05  Score=65.98  Aligned_cols=83  Identities=11%  Similarity=0.111  Sum_probs=62.0

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      ..+....+++++|+|-++...+  ....|.||+|+||.....     .-.+...++.+.+.+|+|.|+|.|||.++|..|
T Consensus        22 p~~~~~~~~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~-----~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G   96 (117)
T d1wj3a_          22 PGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQN-----NVQVLNTNKTSAELVLPIKEDYIIEVKATTDGG   96 (117)
T ss_dssp             CCSCBCCEETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCS-----SCEEEEESSSEEEEECCCSSCEEEEEEEEESSC
T ss_pred             CcceEEeecCCEEEEEEeecccccCCCceeEEEEEEEecCCC-----ceeeeeceeeEEEeeccCCcEEEEEEEEEcCCc
Confidence            3445667999999999987554  345799999999987653     113445577889999999999999999999988


Q ss_pred             cCccee-eEEe
Q 005110          403 ELGRCE-IWFS  412 (714)
Q Consensus       403 elg~~E-~k~~  412 (714)
                      +=-.+| +.+.
T Consensus        97 ~G~~S~~v~v~  107 (117)
T d1wj3a_          97 DGTSSEQIRIP  107 (117)
T ss_dssp             CCCBCCCEEEC
T ss_pred             cCCCCCCEEEe
Confidence            733444 3443

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=2.4e-05  Score=63.63  Aligned_cols=75  Identities=12%  Similarity=0.106  Sum_probs=52.4

Q ss_pred             EEeeceeEEEEeCcCCC----CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 005110          330 EDVRATSLTVVLGSEDP----SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  405 (714)
Q Consensus       330 E~vt~tSv~vvL~~~~~----s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  405 (714)
                      .++++++|+|-......    ...-+.+|.+.|+.....   .-........+.+.|.||.|.|+|.|||-++++.|..|
T Consensus        16 ~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~rVrA~n~~G~ws   92 (104)
T d3d48r2          16 PEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAA---EWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWS   92 (104)
T ss_dssp             -----CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCS---SCEEEEEETCSEEEECC--CCCEEEEEEEEEESSSCCC
T ss_pred             ccCCCCeEEEEEeCCccccCCCCcEEEEEeecccccccc---ceeeeccccccEEEECCCCCCCEEEEEEEEEeCCCCCC
Confidence            47788999999886642    123467899988887654   22345667788999999999999999999999988767


Q ss_pred             ce
Q 005110          406 RC  407 (714)
Q Consensus       406 ~~  407 (714)
                      .|
T Consensus        93 ~w   94 (104)
T d3d48r2          93 AW   94 (104)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.4e-05  Score=65.19  Aligned_cols=80  Identities=14%  Similarity=0.152  Sum_probs=49.5

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC---CCCCcceEEEEeeecCCCCC-CCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDP---SPGNIISYTLWHRRAHEGFP-ARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~---s~~~i~Gy~LWhrks~~~y~-~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      ++.-+.++++++++++|-......   .......|.+-||...+... ..-......+.+.+.|.+|.|.|+|.|||-+.
T Consensus         4 ~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVrA~   83 (101)
T d1iarb2           4 APGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAW   83 (101)
T ss_dssp             CCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEECSSCCEEEECC-----CCCEEEEEEEE
T ss_pred             cCCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeeeccCccceEEEECCCCCCCEEEEEEEEE
Confidence            344688899999999999876543   23345579999988766422 11222334556789999999999999999998


Q ss_pred             cCCc
Q 005110          399 NGTT  402 (714)
Q Consensus       399 ~~~~  402 (714)
                      ++.|
T Consensus        84 ~~~g   87 (101)
T d1iarb2          84 AQAY   87 (101)
T ss_dssp             CGGG
T ss_pred             cCCC
Confidence            8755

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=3.1e-05  Score=63.35  Aligned_cols=76  Identities=9%  Similarity=-0.066  Sum_probs=59.9

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          325 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       325 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      -.++...++.+|+++-..... .....++|.|+||..... +.  .......+..-+++.+|.|.|.|.|+|.++|..|.
T Consensus         8 ~n~~~~~~~~~si~~~W~p~~-~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~   84 (95)
T d1bqua1           8 KNLSCIVNEGKKMRCEWDGGR-ETHLETNFTLKSEWATHKFAD--CKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGK   84 (95)
T ss_dssp             EEEEEEEETTSCCEEEEECCS-CCSSCCEEEEEEEETTEECCC--EECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEE
T ss_pred             eeeEEEEccCCEEEEEEeCcc-cCCCceEEEEEEEEcccceeE--eecccccceeeeeeeecCCCcEEEEEEEEEeCCcc
Confidence            358899999999999987653 334468999999998765 32  22334566777899999999999999999998874

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=2.9e-06  Score=70.91  Aligned_cols=76  Identities=18%  Similarity=0.253  Sum_probs=58.3

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 005110          327 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  403 (714)
Q Consensus       327 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  403 (714)
                      |+++.|+++||+|-..........|.||+|.||..... -...-+.......+.+.|.+|.|.| |.|||.++|..|+
T Consensus        11 v~~~~~~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~t-Y~~rV~A~n~~G~   87 (102)
T d2dtge1          11 VTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPGN-YSVRIRATSLAGN   87 (102)
T ss_dssp             CCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSSE-ECCCCCEEETTBC
T ss_pred             CEEEEECCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeeeeeecccceEEEEEeccceee-EEEEEEEEcCCcc
Confidence            77888999999999876544455699999999887654 2222223345566779999999986 9999999999884

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=0.00015  Score=59.94  Aligned_cols=77  Identities=14%  Similarity=-0.001  Sum_probs=54.7

Q ss_pred             EE-EEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCcee---e--ecCCceeEeecCCcceeeeEEEEecc
Q 005110          327 VK-FEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCT---L--FAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       327 ~r-FE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~---~--~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      ++ +.++++++|++-..-. ......+.|.++|+..... -.......   .  ....+.|.|++|.|.|+|.|||.+.+
T Consensus        11 v~~i~~~~~~sv~~sW~p~-~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~t~Y~frV~A~N   89 (107)
T d1cd9b1          11 LSCLMHLTTNSLVCQWEPG-PETHLPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYMAIWVQAEN   89 (107)
T ss_dssp             EEEEEETTTTEEEEEEECC-SCCSSCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCEEEEEEEEE
T ss_pred             CEEEEecCCCEEEEEEcCC-CCCCCCcceeEEEEEeecccceeeeeeeeeccccCccccEEEcCCCCcCceEEEEEEEEe
Confidence            65 6789999999999633 3333346788888877654 22222211   1  23457899999999999999999999


Q ss_pred             CCccC
Q 005110          400 GTTEL  404 (714)
Q Consensus       400 ~~~el  404 (714)
                      ..|+-
T Consensus        90 ~~G~s   94 (107)
T d1cd9b1          90 MLGSS   94 (107)
T ss_dssp             TTEEE
T ss_pred             CCccc
Confidence            87753

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=0.00016  Score=59.50  Aligned_cols=76  Identities=11%  Similarity=0.044  Sum_probs=57.4

Q ss_pred             eEEEEEee--ceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 005110          326 MVKFEDVR--ATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  401 (714)
Q Consensus       326 ~~rFE~vt--~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  401 (714)
                      .+.+..|+  +++|.|-.+....  ....+..|.+.||.....  ..-+..+...++.++|.+|.|.|.|.|||-+++..
T Consensus         7 ~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra~n~~   84 (104)
T d1n26a3           7 NITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSK--TFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEF   84 (104)
T ss_dssp             EEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCS--CCEEEECGGGCSEEEESSCCTTCCEEEEEEEEETT
T ss_pred             CCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCC--ceeeeccccceEEEEECCCCCCCEEEEEEEEEeCC
Confidence            46667764  5679998887642  467799999999977654  22233456677899999999999999999998875


Q ss_pred             cc
Q 005110          402 TE  403 (714)
Q Consensus       402 ~e  403 (714)
                      |.
T Consensus        85 g~   86 (104)
T d1n26a3          85 GQ   86 (104)
T ss_dssp             TB
T ss_pred             Cc
Confidence            43

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.42  E-value=0.00027  Score=57.83  Aligned_cols=75  Identities=15%  Similarity=0.100  Sum_probs=56.3

Q ss_pred             EEeeceeEEEEeCcCCCC----CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 005110          330 EDVRATSLTVVLGSEDPS----PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  405 (714)
Q Consensus       330 E~vt~tSv~vvL~~~~~s----~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  405 (714)
                      .+.++++|+|-.+.....    ...+.+|.|-||.....   .-..+.....+.+.|+||.|+|+|.|||-+-++.|..|
T Consensus        16 ~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS   92 (103)
T d1f6fb2          16 LKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAE---EWEIHFTGHQTQFKVFDLYPGQKYLVQTRCKPDHGYWS   92 (103)
T ss_dssp             ---CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCS---CCEEEEEETCSEEEECCCCTTCEEEEEEEEEESSSCCC
T ss_pred             cccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCc---ceeeecccceeEEEeCCCCcceEEEEEEEEEeCCCCCC
Confidence            466788999999876432    23568999999988764   22335566789999999999999999999988877656


Q ss_pred             ce
Q 005110          406 RC  407 (714)
Q Consensus       406 ~~  407 (714)
                      .|
T Consensus        93 ~w   94 (103)
T d1f6fb2          93 RW   94 (103)
T ss_dssp             CC
T ss_pred             CC
Confidence            55

>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=0.00021  Score=58.35  Aligned_cols=76  Identities=12%  Similarity=0.129  Sum_probs=49.0

Q ss_pred             EEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 005110          327 VKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  404 (714)
Q Consensus       327 ~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  404 (714)
                      +.... +..+++|-...... -...+.+|.+.||+....-....+ ....+.+.+.|.+|.|+|.|.|||-+.++.|.+
T Consensus        11 l~v~~-~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~-~~~~~~~~~~l~~L~p~t~Y~~rVRa~~~~g~~   87 (100)
T d2gysa4          11 LQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKT-ETLQNAHSMALPALEPSTRYWARVRVRTSRTGY   87 (100)
T ss_dssp             EEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCE-EEEESCSEEECCCCCSSCCCEEEEEEEECCTTC
T ss_pred             cEEEE-CCCEEEEEEecCcccCCccceEEEEEEeecccceeceee-cccCCceEEEeCCCCCCCeEEEEEEEEECCCCC
Confidence            44433 55688887776654 344567999999987654222222 234578899999999999999999998877654

>d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor common gamma chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.00095  Score=54.69  Aligned_cols=70  Identities=13%  Similarity=0.153  Sum_probs=55.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      +--+..++++.++|+|-.+...+  ..+.+|.|.|+.....   +-+-+.....+.+.|.+|.|.|+|.|||-+=
T Consensus         6 P~nl~v~~~~~~~v~l~W~~p~~--~~~~~y~v~y~~~~~~---~~~~~~~~~~~~~~~~~L~p~t~Y~frVRa~   75 (95)
T d2b5ic1           6 PENLTLHKLSESQLELNWNNRFL--NHCLEHLVQYRTDWDH---SWTEQSVDYRHKFSLPSVDGQKRYTFRVRSR   75 (95)
T ss_dssp             CEEEEEEEEETTEEEEEEECSSC--STTCEEEEEEEETTCS---SCEEEEECSSCEEEECSCCTTSCEEEEEEEE
T ss_pred             CCCCEEEEEeCCEEEEEECCCCC--ceeEEEEEEEEcCCCc---eeeEeeecccceeEcCCCCCCCEEEEEEEEe
Confidence            34688899999999999876543  4578999999988664   2233455677899999999999999999873

>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Erythropoietin (EPO) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00084  Score=55.10  Aligned_cols=78  Identities=13%  Similarity=0.095  Sum_probs=54.4

Q ss_pred             cCceEEEEEe-eceeEEEEeCcCC-CCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 005110          323 VPNMVKFEDV-RATSLTVVLGSED-PSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  400 (714)
Q Consensus       323 ~~~~~rFE~v-t~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  400 (714)
                      ++..+..+.. .+++|+|-..... .....+.+|.+-||..... .......+....+.++|.+|.|.|.|.|||-+-++
T Consensus         7 PP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~-~~~~~~~~~~~~t~~~i~~L~p~t~Y~~rVRar~~   85 (105)
T d1erna2           7 APVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGA-GSVQRVEILEGRTECVLSNLRGRTRYTFAVRARMA   85 (105)
T ss_dssp             CCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CC-CEEEEEEECTTCCEEEECSCCSSCEEEEEEEEEEC
T ss_pred             CCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCC-CceEEEeecCCccEEEEeCCCCCcEEEEEEEEEEC
Confidence            3445666665 4556777776554 3467788999999987653 22234455666788999999999999999999765


Q ss_pred             C
Q 005110          401 T  401 (714)
Q Consensus       401 ~  401 (714)
                      .
T Consensus        86 ~   86 (105)
T d1erna2          86 E   86 (105)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.0013  Score=54.85  Aligned_cols=71  Identities=17%  Similarity=0.137  Sum_probs=51.1

Q ss_pred             ceeEEEEeCcCCC----CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc-Ccce
Q 005110          334 ATSLTVVLGSEDP----SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE-LGRC  407 (714)
Q Consensus       334 ~tSv~vvL~~~~~----s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e-lg~~  407 (714)
                      ..+|+|-......    ....+..|.|.||.....   .-+.+....++.+.|+||.|+|+|.|||-+.+..+. .|.|
T Consensus        20 ~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~---~w~~~~~~~~~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~w   95 (106)
T d1axib2          20 HADIQVRWEAPRNADIQKGWMVLEYELQYKEVNET---KWKMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEF   95 (106)
T ss_dssp             EEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCS---SCEECCCBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCC
T ss_pred             cCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCc---cceeeeecccceEEECCCCCCCEEEEEEEEEECCCCCCCCC
Confidence            3478888875532    234578899999987664   223344567899999999999999999999775432 4543

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.005  Score=50.32  Aligned_cols=88  Identities=14%  Similarity=0.068  Sum_probs=59.5

Q ss_pred             ceEEEEEe--eceeEEEEeCcCCC---CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 005110          325 NMVKFEDV--RATSLTVVLGSEDP---SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  399 (714)
Q Consensus       325 ~~~rFE~v--t~tSv~vvL~~~~~---s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  399 (714)
                      -.++++.|  ++++|+|-......   ...-+..|.+=|+.....   +-..+.....+.+.|.+|.|.|+|.|||-+.+
T Consensus        12 ~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~---~~~~~~~~~~~~~~i~~L~~~t~Y~~rVrA~~   88 (109)
T d1uc6a_          12 ENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILD---QWQHVELSNGTAHTITDAYAGKEYIIQVAAKD   88 (109)
T ss_dssp             EEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSC---CCCCEEESSCSEEEETTCCSSSCEEEEEECCB
T ss_pred             CCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCC---ceEEeccCCceeEEeCCCCCCCEEEEEEEEEE
Confidence            35677766  67889998876542   223456788877776554   11235567788999999999999999999966


Q ss_pred             CC-ccCcce-eeEEecCc
Q 005110          400 GT-TELGRC-EIWFSTGS  415 (714)
Q Consensus       400 ~~-~elg~~-E~k~~T~s  415 (714)
                      .. |..+.| +.-..|.+
T Consensus        89 ~~~g~wS~WS~~~~~tt~  106 (109)
T d1uc6a_          89 NEIGTWSDWSVAAHATPW  106 (109)
T ss_dssp             SSSCCCCCCCEEEEECCC
T ss_pred             CCCCCcCCCCCCEEeECC
Confidence            42 344543 44444443

>d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.0034  Score=51.81  Aligned_cols=79  Identities=8%  Similarity=0.071  Sum_probs=54.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC------CCCCcceEEEEeeecCCCCCCCCce-eeecCCceeEeecCCcceeeeEEE
Q 005110          323 VPNMVKFEDVRATSLTVVLGSEDP------SPGNIISYTLWHRRAHEGFPARPTC-TLFAPNTRFVVTGLCPATEYQFKV  395 (714)
Q Consensus       323 ~~~~~rFE~vt~tSv~vvL~~~~~------s~~~i~Gy~LWhrks~~~y~~ept~-~~~~p~~r~~vs~L~P~TEY~fkv  395 (714)
                      ++..+.+ .++.++|+|-......      ....+..|.|-||+.... ..+-.. ..-.+...+.|.+|.|.|+|.|||
T Consensus         8 pP~nl~v-~~~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~rV   85 (114)
T d2gysa2           8 EPRDLQI-STDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDS-WEDAAILLSNTSQATLGPEHLMPSSTYVARV   85 (114)
T ss_dssp             CCEEEEE-EEETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSC-STTCEEEEESSSEEEECTTTCCTTCEEEEEE
T ss_pred             cCCCeEE-EEeCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCc-eEEEEEeeccCceEEEEeCCCCCCcEEEEEE
Confidence            3345666 4788898887766532      133456799999987653 222222 234566789999999999999999


Q ss_pred             EeccCCcc
Q 005110          396 VSSNGTTE  403 (714)
Q Consensus       396 vsF~~~~e  403 (714)
                      -+++..|.
T Consensus        86 Ra~~~~g~   93 (114)
T d2gysa2          86 RTRLAPGS   93 (114)
T ss_dssp             EEEECTTS
T ss_pred             EEEeCCCC
Confidence            99987654

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.00079  Score=57.09  Aligned_cols=74  Identities=14%  Similarity=0.095  Sum_probs=51.3

Q ss_pred             eEEEE-EeeceeEEEEeCcCC------CCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 005110          326 MVKFE-DVRATSLTVVLGSED------PSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       326 ~~rFE-~vt~tSv~vvL~~~~------~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      .+++. .++++||.|-++-..      .....|.||++++......-..    ......+.+.|+||.|.|.|.|+|.++
T Consensus        16 ~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~----~~~~~~~~~~i~~L~~~t~Y~v~V~A~   91 (117)
T d2cspa1          16 DVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAEVI----FPTADSTAVELVRLRSLEAKGVTVRTL   91 (117)
T ss_dssp             EEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEEEEEC----CTTCSEEEEESHHHHHHTCSCBEEEEE
T ss_pred             ccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeecccceeee----eeccceeeeeccCCCCCcEEEEEEEEE
Confidence            45554 367789999886431      1245688898887544332111    123446688999999999999999999


Q ss_pred             cCCcc
Q 005110          399 NGTTE  403 (714)
Q Consensus       399 ~~~~e  403 (714)
                      |..|+
T Consensus        92 n~~G~   96 (117)
T d2cspa1          92 SAQGE   96 (117)
T ss_dssp             ESSCC
T ss_pred             cCCCc
Confidence            99886

>d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-gamma receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.0042  Score=50.01  Aligned_cols=81  Identities=14%  Similarity=0.040  Sum_probs=54.6

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCcee-eecCCceeEeecCCcceeeeEEEEec
Q 005110          321 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCT-LFAPNTRFVVTGLCPATEYQFKVVSS  398 (714)
Q Consensus       321 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~-~~~p~~r~~vs~L~P~TEY~fkvvsF  398 (714)
                      +|++.-++++.++... +|-.+........+  |...++..... ....+.|. +......+.+.+|.|.+.|.|||-++
T Consensus         1 vP~P~nv~v~s~n~~~-~L~W~pP~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~fRV~A~   77 (98)
T d1fyhb1           1 VPTPTNVTIESYNMNP-IVYWEYQIMPQVPV--FTVEVKNYGVKNSEWIDACINISHHYCNISDHVGDPSNSLWVRVKAR   77 (98)
T ss_dssp             CCCCEEEEEECBSSCC-EEEEECCCCSSCCE--EEEEEEETTCSSSCCEEEEEEESSSEEECGGGCCSTTSCEEEEEEEE
T ss_pred             CccCCceEEEEeCCcE-EEEECCCCCCCCCc--eeEEEEEeccccceeEEeeeecccceeeeEecccCCCCEEEEEEEEE
Confidence            4677789999887654 57777654433333  44444444333 33333333 45677789999999999999999999


Q ss_pred             cCCccC
Q 005110          399 NGTTEL  404 (714)
Q Consensus       399 ~~~~el  404 (714)
                      ++.|.=
T Consensus        78 n~~g~S   83 (98)
T d1fyhb1          78 VGQKES   83 (98)
T ss_dssp             ETTEEC
T ss_pred             cCCccc
Confidence            988653

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.003  Score=53.48  Aligned_cols=37  Identities=19%  Similarity=0.244  Sum_probs=31.1

Q ss_pred             CceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 005110          369 PTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  405 (714)
Q Consensus       369 pt~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  405 (714)
                      ....+....+++.|.||.|.|.|.|||.+|+..|.-+
T Consensus       146 ~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~~~  182 (196)
T d2dtge2         146 RPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEE  182 (196)
T ss_dssp             SCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSC
T ss_pred             EEEEeccceEEEEECCCCCCCEEEEEEEEEECCCCCC
Confidence            3445567788999999999999999999999887654

>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein 8
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.91  E-value=0.0059  Score=49.82  Aligned_cols=50  Identities=24%  Similarity=0.545  Sum_probs=33.2

Q ss_pred             eeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccCcceeEEeccCCCcc
Q 005110          143 CICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVN  210 (714)
Q Consensus       143 ~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk~s  210 (714)
                      |||.+-++..  -.||.|+        .|.-|-|..|.      |+...  ....+..|+|..|...+
T Consensus        15 CiC~~~~~~~--~~mI~Cd--------~C~~W~H~~C~------g~~~~--~~~~~~~~~C~~C~~~~   64 (79)
T d1wepa_          15 CLCRQPYNVN--HFMIECG--------LCQDWFHGSCV------GIEEE--NAVDIDIYHCPDCEAVF   64 (79)
T ss_dssp             STTSCSCCSS--SCEEEBT--------TTCCEEEHHHH------TCCHH--HHTTCSBBCCTTTTTTS
T ss_pred             eECCCccCCC--CcEEECC--------CCCCcEecccc------Ccchh--cCCCCCEEECccCcCCc
Confidence            4787754322  2699999        99999999996      22110  11233479999997643

>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein At5g26210
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.84  E-value=0.0059  Score=47.62  Aligned_cols=52  Identities=21%  Similarity=0.501  Sum_probs=34.6

Q ss_pred             ceeeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccCcceeEEeccCCCc
Q 005110          140 CSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKV  209 (714)
Q Consensus       140 CsC~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk~  209 (714)
                      .-|.+|.+-++.  .-.||.|+        .|+.|-|+.|.=-...        .......|+|..|-..
T Consensus         7 ~~C~~C~~~~~~--~~~~I~Cd--------~C~~w~H~~C~~~~~~--------~~~~~~~w~C~~C~~~   58 (64)
T d1we9a_           7 GQCGACGESYAA--DEFWICCD--------LCEMWFHGKCVKITPA--------RAEHIKQYKCPSCSNK   58 (64)
T ss_dssp             CCCSSSCCCCCS--SSCEEECS--------SSCCEEETTTTTCCTT--------GGGGCSSCCCHHHHTT
T ss_pred             CcCcCcCCCCCC--CCCEEEcC--------CCCccCCcccCCcChH--------HCCCCCeEECcCCcCc
Confidence            457788875433  23699999        9999999999721111        1112246999998654

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.73  E-value=0.038  Score=46.41  Aligned_cols=71  Identities=13%  Similarity=0.073  Sum_probs=39.6

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 005110          324 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  402 (714)
Q Consensus       324 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  402 (714)
                      +--++...++++||+|-.+......+.|.||.|+|+..... ....        .......+|.|.+.|.|+|.+++..+
T Consensus         6 P~~~~~~~~s~~si~vsW~pP~~~ng~i~~Y~V~~~~~~~~~~~~~--------~~~~~~~~~~~~~~y~~~v~~~~~~~   77 (196)
T d2dtge2           6 PLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFE--------LDYCLKGLKLPSRTWSPPFESEDSQK   77 (196)
T ss_dssp             CEEEEEEECSSSCEEEEEECCCCSSSSCSEEECCEEEECCCCSCTT--------CSSSCSCCCCCC--------------
T ss_pred             CcCCEEEeccCCEEEEEEECCCCCCCcEEEEEEEEEcCCCCCceeE--------EeeEEeccccceeEEEEEEEEEcCCc
Confidence            34688999999999999986543335799999999887664 2222        12233345678899999998876654

>d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-10 receptor 1, IL-10R1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.28  E-value=0.062  Score=44.04  Aligned_cols=82  Identities=15%  Similarity=0.156  Sum_probs=58.3

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCcee-eecCCceeEeecCCcceeeeEEEEe
Q 005110          320 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCT-LFAPNTRFVVTGLCPATEYQFKVVS  397 (714)
Q Consensus       320 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~-~~~p~~r~~vs~L~P~TEY~fkvvs  397 (714)
                      .||++.-|+|+.. .+..+|..+-.... ....+|.+=|++.... ....+.|+ +......+.+.+|.+..+|.|||-+
T Consensus         3 ~lP~P~nv~~~s~-n~~~~L~W~pp~~~-g~~~~Y~Ve~~~~~~~~W~~v~~c~~~t~~~~~~~~~~l~~~~~Y~fRVrA   80 (99)
T d1y6kr1           3 ELPSPPSVWFEAE-FFHHILHWTPIPQQ-SESTCYEVALLRYGIESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARVRA   80 (99)
T ss_dssp             CCCCCSCEEEEEE-TTEEEEEECCCTTC-CTTCEEEEEEEETTSCCCEEEEEEESSSEEECGGGGTTGGGSSCEEEEEEE
T ss_pred             cCCCCCcceEEEE-CCEEEEEEcCCCCc-CCCCEEEEEEEECCCcceEEEEeeccccccceeeeeeecCCCCEEEEEEEE
Confidence            4677778888544 45666777533222 3346799999887665 55555555 3445667889999999999999999


Q ss_pred             ccCCcc
Q 005110          398 SNGTTE  403 (714)
Q Consensus       398 F~~~~e  403 (714)
                      .++.|.
T Consensus        81 ~n~~g~   86 (99)
T d1y6kr1          81 VDGSRH   86 (99)
T ss_dssp             EETTEE
T ss_pred             EcCCCc
Confidence            988764

>d2c4fu1 b.1.2.1 (U:91-210) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.44  E-value=0.036  Score=48.01  Aligned_cols=71  Identities=17%  Similarity=0.191  Sum_probs=50.6

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCC---------CCCCc----ceEEEEeeecCCCCCCCCceeeecCCceeEeecCC
Q 005110          320 NVIVPNMVKFEDVRATSLTVVLGSEDP---------SPGNI----ISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLC  386 (714)
Q Consensus       320 ~l~~~~~~rFE~vt~tSv~vvL~~~~~---------s~~~i----~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~  386 (714)
                      +.+.+..|........||.|.+.....         +..+|    --|+|-||+....         -.-+..+.|.||.
T Consensus        16 T~IGPP~v~~~~~~~~sl~V~i~~P~t~~~~~~~~~~~~d~~~~~l~Y~V~~w~~~s~---------~~~~~~~~l~~L~   86 (116)
T d2c4fu1          16 TNLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWSGKKT---------AKTNTNEFLIDVD   86 (116)
T ss_dssp             SBCCCCCEEEEEEETTEEEEEECCCEEEEESSSCEEEHHHHHGGGCEEEEEECCCCEE---------EEESSSEEEEECC
T ss_pred             CEeCCceEEEEecCCCEEEEEEeCCCCcccCCCceeehhhhccCCcEEEEEEEECCce---------EEEeeeEEEeCCC
Confidence            445556788777777899998766531         11222    3599999987553         1236778999999


Q ss_pred             cceeeeEEEEecc
Q 005110          387 PATEYQFKVVSSN  399 (714)
Q Consensus       387 P~TEY~fkvvsF~  399 (714)
                      |.|+|+|+|=+|-
T Consensus        87 p~t~YCv~Vqa~i   99 (116)
T d2c4fu1          87 KGENYCFSVQAVI   99 (116)
T ss_dssp             TTCCCEEEEEEEC
T ss_pred             CCCcEEEEEEEEe
Confidence            9999999998873

>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein At1g33420
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.86  E-value=0.043  Score=43.46  Aligned_cols=46  Identities=33%  Similarity=0.777  Sum_probs=32.2

Q ss_pred             eeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccCcceeEEeccCCC
Q 005110          144 ICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRK  208 (714)
Q Consensus       144 IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk  208 (714)
                      ||++-+++  .-.||.|+        .|..|-|+.|.      |+-..   ...+..|+|..|-.
T Consensus        20 ~C~~~~~~--~~~mv~Cd--------~C~~w~H~~C~------g~~~~---~~~~~~~~C~~C~~   65 (72)
T d1weea_          20 KCGTKDDD--GERMLACD--------GCGVWHHTRCI------GINNA---DALPSKFLCFRCIE   65 (72)
T ss_dssp             TTCCCSCC--SSCEEECS--------SSCEEEETTTT------TCCTT---SCCCSCCCCHHHHH
T ss_pred             eCCCCcCC--CCeEEEeC--------CCCCcCchhhc------CCccc---cCCCCcEECcCCcC
Confidence            67764433  45799999        99999999996      22111   23456899998843

>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein 22
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.40  E-value=0.043  Score=44.88  Aligned_cols=52  Identities=19%  Similarity=0.504  Sum_probs=33.4

Q ss_pred             eeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccCcceeEEeccCC
Q 005110          142 CCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCR  207 (714)
Q Consensus       142 C~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cg  207 (714)
                      |+||.+... .+.-.||.|+        .|..|.|+.|.=-.......     ...+..|+|..|-
T Consensus        19 C~iC~~~~~-~~~~~~v~Cd--------~C~~~~H~~C~~p~~~~~~~-----~~~~~~W~C~~C~   70 (88)
T d1weva_          19 CVVCRQMTV-ASGNQLVECQ--------ECHNLYHQDCHKPQVTDKEV-----NDPRLVWYCARCT   70 (88)
T ss_dssp             CSSSCCCCC-CTTCCEEECS--------SSCCEEETTTSSSCCCHHHH-----HCTTCCCCCHHHH
T ss_pred             ccCCCCccC-CCCCeEEEcC--------CCCCccccccCCCccccccc-----ccCCCeEECcccC
Confidence            778876543 2345699999        89999999993111111111     1246689999994

>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Williams-Beuren syndrome transcription factor, WSTF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.39  E-value=0.23  Score=36.64  Aligned_cols=49  Identities=27%  Similarity=0.637  Sum_probs=34.9

Q ss_pred             eeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccCcceeEEeccCCCcc
Q 005110          142 CCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVN  210 (714)
Q Consensus       142 C~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk~s  210 (714)
                      |.||++-+   ++..+|.|+        .|..|-|+.|.--. +.        ...++.|+|..|...|
T Consensus         3 C~vC~~~~---~~~~~i~Cd--------~C~~~~H~~C~~p~-~~--------~~p~~~W~C~~C~~~t   51 (51)
T d1f62a_           3 CKVCRKKG---EDDKLILCD--------ECNKAFHLFCLRPA-LY--------EVPDGEWQCPACQPAT   51 (51)
T ss_dssp             CTTTCCSS---CCSCCEECT--------TTCCEECHHHHCTT-CC--------SCCSSCCSCTTTSCCC
T ss_pred             CcCcCCCC---CCCCEEEcC--------CCCCCCCCCCCCCC-CC--------cCCCCCEECcCCcCcC
Confidence            67888765   356789999        99999999996321 11        1235679999997543

>d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Sweet potato (Ipomoea batatas) [TaxId: 4120]

Probab=81.69  E-value=0.84  Score=39.07  Aligned_cols=71  Identities=8%  Similarity=0.061  Sum_probs=38.9

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCC-CCCCCcceEEEEeeecCCCCCCCCce--ee--ecC-----CceeEeecCCcceee
Q 005110          322 IVPNMVKFEDVRATSLTVVLGSED-PSPGNIISYTLWHRRAHEGFPARPTC--TL--FAP-----NTRFVVTGLCPATEY  391 (714)
Q Consensus       322 ~~~~~~rFE~vt~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~y~~ept~--~~--~~p-----~~r~~vs~L~P~TEY  391 (714)
                      |.+-.+-|-+..+||++|-.-... .....+    +.|..+...+...-+.  ..  ...     .-+..++||.|.|.|
T Consensus        25 P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~----V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~v~LtgL~P~T~Y  100 (119)
T d1xzwa1          25 PQQVHITQGDYEGRGVIISWTTPYDKAGANK----VFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKY  100 (119)
T ss_dssp             CEEEEEEECSSSSSCEEEEEEESSCCTTTTE----EEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCEE
T ss_pred             CCEEEEEecCCCCCEEEEEEECCCCCCCCCE----EEEcCCCCCCccEEEEEEEEeecccccCCeEEEEEECCCCCCCEE
Confidence            333445556667899999877532 222223    3343333221111111  11  001     136899999999999


Q ss_pred             eEEEE
Q 005110          392 QFKVV  396 (714)
Q Consensus       392 ~fkvv  396 (714)
                      .|||-
T Consensus       101 ~YrVG  105 (119)
T d1xzwa1         101 YYRLG  105 (119)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            99984

>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Sumoylation ligase E3, SIZ1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.33  E-value=0.14  Score=41.08  Aligned_cols=52  Identities=27%  Similarity=0.546  Sum_probs=30.7

Q ss_pred             eeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhh-hhccccccccCCCccCcceeEEeccCCC
Q 005110          143 CICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA-LKNERSGIGKDRCYSGLDGSFYCISCRK  208 (714)
Q Consensus       143 ~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCA-Lr~~~~G~~~~g~~~~lD~~f~C~~Cgk  208 (714)
                      |||.+.+++ +.-+|+-|+        .|..|.|+.|. |.....+-     .......|+|..|-.
T Consensus        19 C~C~~~~~~-~~~i~c~c~--------~C~~W~H~~Cvgi~~~~~~~-----~~~~~~~~~C~~C~~   71 (78)
T d1wewa_          19 CVCGNSLET-DSMIQCEDP--------RCHVWQHVGCVILPDKPMDG-----NPPLPESFYCEICRL   71 (78)
T ss_dssp             CSSCCCCCC-SCEEECSST--------TTCCEEEHHHHSCCCTTTCS-----CSCSCSSCCCHHHHH
T ss_pred             eECCCccCC-CcEEEEeCC--------CCCcCCCccccCcccccccc-----ccCCCCEEECCCCcC
Confidence            367765542 333455555        89999999996 32222211     122344799999843