Query 005113
Match_columns 714
No_of_seqs 139 out of 229
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 15:44:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005113.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005113hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r17_C Vacuolar protein sortin 100.0 2.8E-72 9.5E-77 589.9 17.1 230 477-708 1-249 (298)
2 1bl1_A Parathyroid hormone rec 47.1 6.2 0.00021 27.4 0.9 12 101-112 16-27 (31)
3 2rg8_A Programmed cell death p 24.8 2.4E+02 0.0082 26.4 8.4 45 28-74 51-95 (165)
4 1ug3_A EIF4GI, eukaryotic prot 18.7 3.8E+02 0.013 27.8 9.3 123 25-156 16-158 (339)
5 3ro3_A PINS homolog, G-protein 18.5 4E+02 0.014 21.8 11.7 129 555-691 27-155 (164)
6 4b4t_O 26S proteasome regulato 18.2 5.6E+02 0.019 27.1 10.7 129 494-630 89-224 (393)
7 3q15_A PSP28, response regulat 16.8 7.8E+02 0.027 24.6 11.2 69 99-180 216-285 (378)
8 3ut4_A CTHE_2751, putative unc 16.2 3.4E+02 0.012 24.8 7.1 37 233-270 57-93 (134)
9 4hat_C Exportin-1; heat repeat 15.4 1.5E+03 0.051 27.2 18.1 22 572-593 842-863 (1023)
10 3pk1_B Apoptosis regulator BAX 14.4 62 0.0021 22.7 1.2 12 680-691 8-19 (34)
No 1
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-72 Score=589.90 Aligned_cols=230 Identities=41% Similarity=0.648 Sum_probs=212.3
Q ss_pred hHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHhcCCCccccccchHHHHHHHHHHHHhcCCCCCCCCCCCCCChhHH
Q 005113 477 DFKEEQNSVARLIQMLQNDDTEEMFKIICTVRKHILTGGPKRLPFTVPPLVFSSLKLVRQLQGPEENPFGEEGSTTPKKV 556 (714)
Q Consensus 477 e~~~eq~lv~r~ihli~~~D~e~q~~~l~~~R~~f~~gg~~ri~~tlp~LV~~~~~L~~~~~~~~~~~~~~~~~~~~kk~ 556 (714)
||.+||++|||+||+++++||++||++|..+|++|++||++|++||+|||||++++|+|+++..+..+..|. ..++|+
T Consensus 1 ef~eeQ~~varliHli~~~d~d~~f~il~~~rk~~~~gg~~Ri~~TlPpLvf~~l~L~r~~~~~~~~d~~~~--~~~~ki 78 (298)
T 2r17_C 1 DFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKENSKVDDKWE--KKCQKI 78 (298)
T ss_dssp CTTTTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHHHHHTTTTTCSSHH--HHHHHH
T ss_pred CcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCccceeecccHHHHHHHHHHHHHHhcccchhhHH--HHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999987644332222 235799
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHHhhhCCC---ccHHHHHHHHHHHhhhhcccCcHHHHHHHHHHHHHHHhccC
Q 005113 557 FQLLNQTIETLYGVPAPELALRLYLQCAEAANDSDL---EPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHV 633 (714)
Q Consensus 557 f~fv~~~i~~l~~~~~~~~~lkLyLq~A~~Ad~~~~---~~iayeFf~qAf~iyEe~i~ds~~Q~~al~~ii~tL~~~~~ 633 (714)
|+|||+||+.|...+.|+++||||||||++||++|+ +++|||||+|||+||||+|+|||+|++||.+|||||+++|+
T Consensus 79 f~fv~~~i~~L~~~~~~elalrL~Lq~A~~ad~~~~~~~e~iaYEFf~qAf~iYEe~IsdSk~Q~~al~~ii~tL~~~~~ 158 (298)
T 2r17_C 79 FSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKC 158 (298)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHccC
Confidence 999999999996557799999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHhccCchhhHHHHHHhhhhccCC-----CCCCcccchHHHHHHhhh-------CCcchH----
Q 005113 634 FGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVD-----DQDNMKDGERKLCIVCSN-------TWPVQS---- 697 (714)
Q Consensus 634 ~~~e~y~~L~tk~~~~askLLkK~dQcrav~~cshL~w~~-----~~~~~~d~krVleCLq~~-------~d~~~s---- 697 (714)
|++||||+|+||||+||||||||||||||||+||||||++ +.+++||||||+|||||+ ||+..+
T Consensus 159 f~~enye~L~tk~t~~askLLKK~dQcraV~~cshLfW~~~~~~~~~~~~rd~krVleCLqkaLkiA~~~~d~~~~v~Lf 238 (298)
T 2r17_C 159 FSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF 238 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHTHHHHHTCBCTTTTTCBCCCHHHHHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred CCHhhHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhcCCCccccchhhccchHHHHHHHHHHHHHHHHHhChhhHHHHH
Confidence 9999999999999999999999999999999999999984 234689999999999997 588888
Q ss_pred HHHhhhhcccc
Q 005113 698 ISILGWCLPTH 708 (714)
Q Consensus 698 ~~il~~~~~~~ 708 (714)
|||||+|+.|-
T Consensus 239 veILn~ylyff 249 (298)
T 2r17_C 239 IEILNRYIYFY 249 (298)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 99999999874
No 2
>1bl1_A Parathyroid hormone receptor; micelle structures, calciotropic hormones, structures; NMR {Homo sapiens} SCOP: j.15.1.1
Probab=47.12 E-value=6.2 Score=27.36 Aligned_cols=12 Identities=42% Similarity=0.742 Sum_probs=10.8
Q ss_pred hhhHHHHHHHHH
Q 005113 101 ILPRLYLLCTVG 112 (714)
Q Consensus 101 IlPRLYLmItVg 112 (714)
+-+|||+|=|||
T Consensus 16 ~FeRL~~iYTVG 27 (31)
T 1bl1_A 16 VFDRLGMIYTVG 27 (31)
T ss_dssp HHHSSHHHHHHH
T ss_pred HHhheeeEEEEe
Confidence 567999999999
No 3
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=24.78 E-value=2.4e+02 Score=26.43 Aligned_cols=45 Identities=18% Similarity=0.303 Sum_probs=30.5
Q ss_pred HHHhhhccHHHHHHHHHHHHHhhhcCCCCCchhhHHHHHHHHhHHHH
Q 005113 28 HRALDSNNLRDALKYSAQMLSELRTSKLSPQKYYQLYMRAFDELRKL 74 (714)
Q Consensus 28 kr~ld~~~l~~ALkhas~mL~ELRts~LsPk~YYeLYm~V~d~L~~L 74 (714)
..++|+++ ..-.++|.+|+.|.+..+||.++.+=|..+.+.|.-+
T Consensus 51 ~~aldrk~--~ere~~s~LL~~L~~~~ls~~~i~~Gf~~lle~ldDl 95 (165)
T 2rg8_A 51 SLALEGKA--SHREMTSKLLSDLCGTVMSTTDVEKSFDKLLKDLPEL 95 (165)
T ss_dssp HHHHTSCH--HHHHHHHHHHHHHBTTTBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCH--HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhChhh
Confidence 33444442 2345688888888888888888888777777666443
No 4
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=18.71 E-value=3.8e+02 Score=27.81 Aligned_cols=123 Identities=15% Similarity=0.248 Sum_probs=57.9
Q ss_pred HHHHHHhhhccHHHHHHHHHHHHHhhhcCCCCCchhhH-HHHHHHHhH-------HHHHHHHHHhhhcCC-C-------c
Q 005113 25 FYMHRALDSNNLRDALKYSAQMLSELRTSKLSPQKYYQ-LYMRAFDEL-------RKLEMFFKEETRRGC-S-------I 88 (714)
Q Consensus 25 ~~Mkr~ld~~~l~~ALkhas~mL~ELRts~LsPk~YYe-LYm~V~d~L-------~~L~~yl~~~~~~g~-~-------l 88 (714)
-.++..+..+++.+|. ..+.||. +|.++++ ++..+...| ..++..|..-.+.|. + .
T Consensus 16 ~ll~Ey~~~~d~~Ea~----~ci~el~----~p~~~~~~v~~~i~~~le~~~~~re~~~~Ll~~L~~~~~is~~~~~~Gf 87 (339)
T 1ug3_A 16 AIIEEYLHLNDMKEAV----QCVQELA----SPSLLFIFVRHGVESTLERSAIAREHMGQLLHQLLCAGHLSTAQYYQGL 87 (339)
T ss_dssp HHHHHHHHHCCHHHHH----HHHHTTC----CGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH----HHHHHcC----CcccHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Confidence 3556666666666653 3456653 3444443 233333222 234444444433331 2 2
Q ss_pred hhhHHHHHHhcchhhHHHH--HHHHHHHHHhcCCCcHHHHHHHHHHHH--hcccchhHHHHHHHHHHHhccc
Q 005113 89 IDLYELVQHAGNILPRLYL--LCTVGSVYIKSKEAPAKDVLKDLVEMC--RGIQHPVRGLFLRSYLSQISRD 156 (714)
Q Consensus 89 ~dLYE~VQyagnIlPRLYL--mItVg~~yi~~~~~p~~eiLkDLvEMc--RGVQhPlRGLFLR~YL~q~~k~ 156 (714)
..++|..--..-=+|+-|- -.-+|.+... +-.|..+++.++.+-. -|..-|+-+.+++.+....+++
T Consensus 88 ~~~~~~l~Dl~lDiP~a~~~La~~v~~~i~~-g~l~~~~l~~~~~~~l~~~g~~~~fl~~vl~~l~~~~g~~ 158 (339)
T 1ug3_A 88 YEILELAEDMEIDIPHVWLYLAELVTPILQE-GGVPMGELFREITKPLRPLGKAASLLLEILGLLCKSMGPK 158 (339)
T ss_dssp HHHHHHHHHHTTTCTTHHHHHHHHHGGGGST-TSCCHHHHHHHHTTTHHHHTCHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHhhChHhhcCccchHHHHHHHHHHHHHC-CCCCHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHcCHH
Confidence 2223322222333454444 3444444332 4456667776665322 2555566666666666555543
No 5
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=18.48 E-value=4e+02 Score=21.85 Aligned_cols=129 Identities=10% Similarity=0.050 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHhhhCCCccHHHHHHHHHHHhhhhcccCcHHHHHHHHHHHHHHHhccCC
Q 005113 555 KVFQLLNQTIETLYGVPAPELALRLYLQCAEAANDSDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVF 634 (714)
Q Consensus 555 k~f~fv~~~i~~l~~~~~~~~~lkLyLq~A~~Ad~~~~~~iayeFf~qAf~iyEe~i~ds~~Q~~al~~ii~tL~~~~~~ 634 (714)
+-.++....+........+......+..-|.+....|--+-|.++|.+|+.++++. .+...+..+...+.........+
T Consensus 27 ~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 105 (164)
T 3ro3_A 27 DAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL-KDRAVEAQSCYSLGNTYTLLQDY 105 (164)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHhhH
Confidence 34444445444443223455556677777888878888888889999999999854 45555555555544444333321
Q ss_pred CccchHHHHHHHHHHHHhccCchhhHHHHHHhhhhccCCCCCCcccchHHHHHHhhh
Q 005113 635 GVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDNMKDGERKLCIVCSN 691 (714)
Q Consensus 635 ~~e~y~~L~tk~~~~askLLkK~dQcrav~~cshL~w~~~~~~~~d~krVleCLq~~ 691 (714)
+.-.....++...+.+.-..+..+.+...-+.+++.. .+-+...++++++
T Consensus 106 --~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~-----g~~~~A~~~~~~a 155 (164)
T 3ro3_A 106 --EKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTAL-----GNHDQAMHFAEKH 155 (164)
T ss_dssp --HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHc-----cCHHHHHHHHHHH
Confidence 1122223333333333334455666666667666643 2456677777764
No 6
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=18.20 E-value=5.6e+02 Score=27.09 Aligned_cols=129 Identities=12% Similarity=0.041 Sum_probs=75.9
Q ss_pred CCCHHHHHHHHHHHHHHHhcCC-----CccccccchHHHHHHHHHHHHhcCCCCCCCCCCCCCChhHHHHHHHHHHHHhh
Q 005113 494 NDDTEEMFKIICTVRKHILTGG-----PKRLPFTVPPLVFSSLKLVRQLQGPEENPFGEEGSTTPKKVFQLLNQTIETLY 568 (714)
Q Consensus 494 ~~D~e~q~~~l~~~R~~f~~gg-----~~ri~~tlp~LV~~~~~L~~~~~~~~~~~~~~~~~~~~kk~f~fv~~~i~~l~ 568 (714)
..|++.-+++|....+.+...+ ....+-..-+.+..-...++-+-.. ++ ...+++...-+...+....
T Consensus 89 ~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~-~d------~~~a~~~l~~~~~~l~~~~ 161 (393)
T 4b4t_O 89 SKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLK-ND------LVKARDLLDDLEKTLDKKD 161 (393)
T ss_dssp TTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHH-SC------HHHHHHHHHHHHHHHHHSC
T ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhc-CC------HHHHHHHHHHHHHhhhccC
Confidence 6678888888877765553211 1112233345555555555543211 10 0112444444444444433
Q ss_pred CCCCHHHHHHHHHHHHHHhhhCCCccHHHHHHHHHHHhhh--hcccCcHHHHHHHHHHHHHHHh
Q 005113 569 GVPAPELALRLYLQCAEAANDSDLEPVAYEFFTQAYILYE--EEISDSRAQVTAIHLIIGTLQR 630 (714)
Q Consensus 569 ~~~~~~~~lkLyLq~A~~Ad~~~~~~iayeFf~qAf~iyE--e~i~ds~~Q~~al~~ii~tL~~ 630 (714)
+ ..+....++|..++..+-.-+-.+-+|..+-+++..|. ++++.+..|..+...++.+|-+
T Consensus 162 ~-~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~~~~~~~~~~~~~~~a~~l~~~all~ 224 (393)
T 4b4t_O 162 S-IPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTLEPSTSITLAERQQLAYDLSISALLG 224 (393)
T ss_dssp C-SSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSSCSHHHHHHHHHHHHHHHHHC
T ss_pred C-ccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHcC
Confidence 3 34678899999999998777666666667777777776 3456666666677777777754
No 7
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=16.77 E-value=7.8e+02 Score=24.59 Aligned_cols=69 Identities=14% Similarity=0.034 Sum_probs=47.8
Q ss_pred cchhhHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHhcccchhHHHHHHHHHHHhccccCCCCCCCCCCCCCChhhhHH
Q 005113 99 GNILPRLYLLCTVGSVYIKSKE-APAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQISRDKLPDIGSEYEGDADTVNDAME 177 (714)
Q Consensus 99 gnIlPRLYLmItVg~~yi~~~~-~p~~eiLkDLvEMcRGVQhPlRGLFLR~YL~q~~k~~LPd~~~~~~~~~g~v~dsi~ 177 (714)
|+--........+|.+|...++ ..+.+.++.-+++++...+|.. ..+.+.|..+-... |+...++.
T Consensus 216 ~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~la~~~~~~------------g~~~~A~~ 282 (378)
T 3q15_A 216 QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLL-PKVLFGLSWTLCKA------------GQTQKAFQ 282 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGH-HHHHHHHHHHHHHT------------TCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhH-HHHHHHHHHHHHHC------------CCHHHHHH
Confidence 3333344566678999998887 4677888888999998888887 66666666655432 56667766
Q ss_pred HHH
Q 005113 178 FVL 180 (714)
Q Consensus 178 Fll 180 (714)
++-
T Consensus 283 ~~~ 285 (378)
T 3q15_A 283 FIE 285 (378)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 8
>3ut4_A CTHE_2751, putative uncharacterized protein; non PFAM singleton, helical fold, unknown function; 2.03A {Clostridium thermocellum} PDB: 3ut8_A 3ut7_A
Probab=16.16 E-value=3.4e+02 Score=24.84 Aligned_cols=37 Identities=11% Similarity=0.266 Sum_probs=30.8
Q ss_pred HHhhhhhhHHHHHHHhcccchhhhHHHhHhHhhCCcch
Q 005113 233 TYKETVLPRVLEQVVNCKDEIAQCYLMDCIIQVFPDEY 270 (714)
Q Consensus 233 ~Y~~~iLP~iLeqIv~C~D~~AQeYLmd~IiQvFPdef 270 (714)
.|.+.+.|.|. +|.++.|.+=..|++++++.-+|.+-
T Consensus 57 ~~~~~l~p~I~-~vl~s~D~~W~ywil~~lv~~~~~~~ 93 (134)
T 3ut4_A 57 LHQSIAMPHIL-TILQGNDIMWKYWVIKLMIPYLIYPN 93 (134)
T ss_dssp HTHHHHHHHHH-HHHHSSCHHHHHHHHHHHGGGCCHHH
T ss_pred HccHhhHHHHH-HHHHcCChHHHHHHHHHHHHcCCHHH
Confidence 46667788664 47799999999999999999999764
No 9
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=15.40 E-value=1.5e+03 Score=27.17 Aligned_cols=22 Identities=18% Similarity=0.243 Sum_probs=14.9
Q ss_pred CHHHHHHHHHHHHHHhhhCCCc
Q 005113 572 APELALRLYLQCAEAANDSDLE 593 (714)
Q Consensus 572 ~~~~~lkLyLq~A~~Ad~~~~~ 593 (714)
.|...++++++|+..|-.....
T Consensus 842 ~~~~~~~~~~~~~~~a~~h~~r 863 (1023)
T 4hat_C 842 LPPAAFKLFVDAICWAFKHNNR 863 (1023)
T ss_dssp SCHHHHHHHHHHHHHHHTCCCH
T ss_pred CCHHHHHHHHHHHHHHcCCCch
Confidence 4566778888888777665443
No 10
>3pk1_B Apoptosis regulator BAX; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens} PDB: 3pl7_C 2xa0_C
Probab=14.39 E-value=62 Score=22.74 Aligned_cols=12 Identities=0% Similarity=-0.247 Sum_probs=10.6
Q ss_pred cchHHHHHHhhh
Q 005113 680 DGERKLCIVCSN 691 (714)
Q Consensus 680 d~krVleCLq~~ 691 (714)
+-|||.+||+|.
T Consensus 8 ~~K~l~~cL~~I 19 (34)
T 3pk1_B 8 STKKLSECLKRI 19 (34)
T ss_dssp THHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 569999999996
Done!