Query 005120
Match_columns 713
No_of_seqs 632 out of 4779
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 15:57:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005120.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005120hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 5.3E-42 1.8E-46 404.6 27.1 339 30-388 7-384 (768)
2 1ogq_A PGIP-2, polygalacturona 100.0 5E-41 1.7E-45 353.5 19.9 295 31-332 2-302 (313)
3 4eco_A Uncharacterized protein 100.0 2.9E-40 9.8E-45 381.2 26.5 337 31-385 26-501 (636)
4 4ecn_A Leucine-rich repeat pro 100.0 1.7E-39 5.7E-44 381.8 30.6 336 29-385 263-741 (876)
5 3rgz_A Protein brassinosteroid 100.0 2.2E-38 7.5E-43 373.7 19.1 235 80-315 316-556 (768)
6 3v47_A TOLL-like receptor 5B a 100.0 2.7E-37 9.1E-42 342.6 25.5 323 61-389 6-412 (455)
7 2id5_A Lingo-1, leucine rich r 100.0 1.6E-36 5.4E-41 338.6 24.0 321 62-389 6-337 (477)
8 4eco_A Uncharacterized protein 100.0 8.1E-35 2.8E-39 335.7 23.9 288 93-386 194-527 (636)
9 3vq2_A TLR4, TOLL-like recepto 100.0 5.9E-34 2E-38 327.5 28.5 136 245-385 393-534 (606)
10 3t6q_A CD180 antigen; protein- 100.0 1.4E-33 4.9E-38 324.3 31.0 318 61-385 6-389 (606)
11 3t6q_A CD180 antigen; protein- 100.0 1.2E-33 4.2E-38 324.8 26.3 300 83-389 255-564 (606)
12 2z7x_B TOLL-like receptor 1, v 100.0 8.9E-34 3E-38 319.9 23.8 107 82-191 21-128 (520)
13 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.4E-33 8.1E-38 319.4 27.4 127 82-214 52-181 (562)
14 3o6n_A APL1; leucine-rich repe 100.0 3.1E-34 1.1E-38 311.5 18.9 322 54-387 3-354 (390)
15 4g8a_A TOLL-like receptor 4; l 100.0 5.5E-33 1.9E-37 320.7 28.1 316 69-389 35-584 (635)
16 4ecn_A Leucine-rich repeat pro 100.0 3.3E-33 1.1E-37 328.4 26.4 283 98-386 440-767 (876)
17 2z81_A CD282 antigen, TOLL-lik 100.0 2.3E-33 7.9E-38 318.6 24.1 311 66-385 5-423 (549)
18 3oja_B Anopheles plasmodium-re 100.0 1.3E-33 4.4E-38 323.7 20.3 324 53-388 8-361 (597)
19 3j0a_A TOLL-like receptor 5; m 100.0 5.5E-32 1.9E-36 322.4 34.8 160 81-240 23-188 (844)
20 1ziw_A TOLL-like receptor 3; i 100.0 3.9E-32 1.3E-36 316.7 29.8 319 62-386 1-367 (680)
21 1ogq_A PGIP-2, polygalacturona 100.0 8.6E-34 3E-38 298.2 12.9 248 106-361 50-302 (313)
22 2id5_A Lingo-1, leucine rich r 100.0 4E-32 1.4E-36 302.9 27.0 293 85-386 14-310 (477)
23 3v47_A TOLL-like receptor 5B a 100.0 7.6E-33 2.6E-37 306.8 19.9 283 79-367 51-412 (455)
24 2z63_A TOLL-like receptor 4, v 100.0 5.2E-32 1.8E-36 308.8 26.0 159 223-386 344-508 (570)
25 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-31 4.4E-36 312.3 28.8 300 84-388 250-625 (680)
26 3j0a_A TOLL-like receptor 5; m 100.0 8.4E-32 2.9E-36 320.8 26.3 298 79-385 45-394 (844)
27 2z63_A TOLL-like receptor 4, v 100.0 1.1E-31 3.8E-36 306.1 25.7 300 80-387 50-485 (570)
28 1xku_A Decorin; proteoglycan, 100.0 7.6E-31 2.6E-35 278.1 28.5 269 106-382 52-329 (330)
29 2z81_A CD282 antigen, TOLL-lik 100.0 1.6E-31 5.6E-36 303.4 24.7 119 80-198 48-168 (549)
30 2z7x_B TOLL-like receptor 1, v 100.0 1.6E-31 5.5E-36 301.4 24.5 287 85-385 3-434 (520)
31 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.4E-31 2.9E-35 298.3 27.2 289 83-385 32-463 (562)
32 2ft3_A Biglycan; proteoglycan, 100.0 1E-30 3.4E-35 277.4 24.8 289 83-383 34-331 (332)
33 4fcg_A Uncharacterized protein 100.0 6.1E-32 2.1E-36 285.9 15.3 278 31-365 23-316 (328)
34 4fmz_A Internalin; leucine ric 100.0 3.1E-30 1.1E-34 275.2 25.9 283 80-385 64-346 (347)
35 1xku_A Decorin; proteoglycan, 100.0 7.6E-30 2.6E-34 270.4 26.5 288 61-361 27-330 (330)
36 3vq2_A TLR4, TOLL-like recepto 100.0 5.9E-30 2E-34 294.1 26.2 320 61-387 5-488 (606)
37 2ft3_A Biglycan; proteoglycan, 100.0 6.7E-30 2.3E-34 271.0 24.1 287 61-361 29-331 (332)
38 3o6n_A APL1; leucine-rich repe 100.0 1.3E-29 4.5E-34 275.0 21.6 266 103-385 42-308 (390)
39 1o6v_A Internalin A; bacterial 100.0 4.4E-29 1.5E-33 277.4 26.2 281 80-387 66-346 (466)
40 2z80_A TOLL-like receptor 2, v 100.0 4.7E-30 1.6E-34 274.6 16.7 270 90-388 39-317 (353)
41 1o6v_A Internalin A; bacterial 100.0 6.3E-29 2.1E-33 276.2 25.9 283 79-388 87-369 (466)
42 3bz5_A Internalin-J, INLJ; leu 100.0 2.6E-28 8.9E-33 269.6 30.2 277 82-385 64-352 (457)
43 2z66_A Variable lymphocyte rec 100.0 9.9E-30 3.4E-34 266.4 16.2 250 61-335 3-262 (306)
44 4fmz_A Internalin; leucine ric 100.0 2E-28 6.7E-33 261.3 25.4 282 81-387 43-326 (347)
45 3oja_B Anopheles plasmodium-re 100.0 4.6E-29 1.6E-33 285.8 21.6 265 104-385 49-314 (597)
46 2z80_A TOLL-like receptor 2, v 100.0 4.6E-29 1.6E-33 266.9 17.6 248 109-385 34-290 (353)
47 4g8a_A TOLL-like receptor 4; l 100.0 1.9E-27 6.6E-32 274.2 29.8 179 49-240 8-187 (635)
48 3zyi_A Leucine-rich repeat-con 100.0 6.4E-28 2.2E-32 266.9 24.2 226 106-334 75-303 (452)
49 1ozn_A Reticulon 4 receptor; N 100.0 1.1E-28 3.9E-33 255.7 16.9 252 85-342 14-269 (285)
50 1wwl_A Monocyte differentiatio 100.0 3E-30 1E-34 271.2 5.1 246 81-335 42-310 (312)
51 3zyj_A Leucine-rich repeat-con 100.0 8.4E-28 2.9E-32 265.1 24.5 232 98-334 58-292 (440)
52 3zyi_A Leucine-rich repeat-con 100.0 1.4E-27 4.7E-32 264.3 25.3 250 108-389 56-307 (452)
53 3zyj_A Leucine-rich repeat-con 100.0 1.5E-27 5E-32 263.1 25.1 250 108-389 45-296 (440)
54 4fcg_A Uncharacterized protein 100.0 4.6E-28 1.6E-32 256.2 19.7 224 128-384 79-313 (328)
55 3bz5_A Internalin-J, INLJ; leu 100.0 1.5E-27 5E-32 263.7 23.5 273 79-387 82-370 (457)
56 2z66_A Variable lymphocyte rec 100.0 2.3E-27 7.8E-32 248.4 22.3 228 110-342 11-244 (306)
57 1ozn_A Reticulon 4 receptor; N 100.0 1.8E-27 6.1E-32 246.6 18.9 237 82-319 32-270 (285)
58 1jl5_A Outer protein YOPM; leu 100.0 4.9E-26 1.7E-30 251.2 31.3 261 81-385 90-350 (454)
59 1jl5_A Outer protein YOPM; leu 99.9 1.8E-27 6.1E-32 262.7 18.6 268 82-386 11-291 (454)
60 1wwl_A Monocyte differentiatio 99.9 4.5E-29 1.5E-33 262.2 2.4 247 102-364 39-310 (312)
61 3o53_A Protein LRIM1, AGAP0063 99.9 2E-28 6.8E-33 257.9 6.4 264 83-365 11-278 (317)
62 3g06_A SSPH2 (leucine-rich rep 99.9 5.5E-27 1.9E-31 266.9 18.7 287 54-388 12-300 (622)
63 2o6q_A Variable lymphocyte rec 99.9 2.2E-25 7.5E-30 229.0 22.2 215 61-287 3-218 (270)
64 2z62_A TOLL-like receptor 4, v 99.9 1.1E-25 3.9E-30 231.8 19.9 208 107-338 29-241 (276)
65 3o53_A Protein LRIM1, AGAP0063 99.9 1.9E-27 6.6E-32 250.3 6.6 246 81-340 33-282 (317)
66 3oja_A Leucine-rich immune mol 99.9 5.1E-27 1.7E-31 261.6 9.9 236 103-357 31-269 (487)
67 2z62_A TOLL-like receptor 4, v 99.9 2.6E-25 8.9E-30 229.2 17.7 227 61-289 1-239 (276)
68 3oja_A Leucine-rich immune mol 99.9 1.9E-26 6.5E-31 257.0 9.8 236 80-329 32-270 (487)
69 1z7x_W Ribonuclease inhibitor; 99.9 7.6E-28 2.6E-32 266.9 -5.1 304 82-385 56-411 (461)
70 3rfs_A Internalin B, repeat mo 99.9 7.3E-25 2.5E-29 225.3 14.1 198 83-287 20-218 (272)
71 3g06_A SSPH2 (leucine-rich rep 99.9 4.9E-23 1.7E-27 234.4 27.8 240 82-366 61-300 (622)
72 1z7x_W Ribonuclease inhibitor; 99.9 4.9E-27 1.7E-31 260.5 -6.0 182 83-264 29-240 (461)
73 4glp_A Monocyte differentiatio 99.9 7E-24 2.4E-28 222.4 17.3 223 106-334 64-307 (310)
74 2o6q_A Variable lymphocyte rec 99.9 1E-22 3.5E-27 209.0 23.8 203 107-336 17-220 (270)
75 3rfs_A Internalin B, repeat mo 99.9 1.9E-23 6.6E-28 214.7 17.2 202 81-293 40-241 (272)
76 1p9a_G Platelet glycoprotein I 99.9 7.7E-23 2.6E-27 212.1 21.1 200 102-334 6-208 (290)
77 3m19_A Variable lymphocyte rec 99.9 6.4E-23 2.2E-27 208.1 18.6 187 66-288 6-193 (251)
78 1p9a_G Platelet glycoprotein I 99.9 1.4E-22 4.9E-27 210.0 21.2 200 81-287 9-208 (290)
79 2xwt_C Thyrotropin receptor; s 99.9 4.9E-23 1.7E-27 207.3 15.9 195 107-307 32-236 (239)
80 4glp_A Monocyte differentiatio 99.9 8.9E-23 3E-27 213.9 12.7 225 82-311 64-308 (310)
81 2xwt_C Thyrotropin receptor; s 99.9 2.3E-22 8E-27 202.4 15.0 218 61-284 6-236 (239)
82 3m19_A Variable lymphocyte rec 99.9 5.5E-22 1.9E-26 201.2 17.7 182 155-339 36-226 (251)
83 3goz_A Leucine-rich repeat-con 99.9 2.6E-24 8.8E-29 230.8 0.1 178 87-265 3-210 (362)
84 2ast_B S-phase kinase-associat 99.9 1.5E-24 5.2E-29 230.0 -2.0 212 62-285 35-258 (336)
85 4ay9_X Follicle-stimulating ho 99.9 6.8E-22 2.3E-26 210.9 17.4 244 63-331 7-256 (350)
86 3goz_A Leucine-rich repeat-con 99.9 3.3E-24 1.1E-28 229.9 -0.8 254 110-363 2-297 (362)
87 2ca6_A RAN GTPase-activating p 99.9 2E-24 6.9E-29 233.8 -3.0 240 98-365 24-318 (386)
88 2o6s_A Variable lymphocyte rec 99.9 9.1E-22 3.1E-26 193.6 14.7 180 61-248 3-186 (208)
89 2ca6_A RAN GTPase-activating p 99.9 8.1E-24 2.8E-28 229.0 -1.0 234 81-338 31-320 (386)
90 1h6u_A Internalin H; cell adhe 99.9 2E-21 6.9E-26 203.3 16.2 193 103-334 38-230 (308)
91 2ast_B S-phase kinase-associat 99.9 3.1E-23 1.1E-27 219.8 2.1 250 106-367 47-310 (336)
92 4ay9_X Follicle-stimulating ho 99.9 4.2E-21 1.4E-25 204.7 18.2 239 109-382 12-256 (350)
93 1h6u_A Internalin H; cell adhe 99.9 3.8E-21 1.3E-25 201.2 17.0 191 81-287 40-230 (308)
94 2o6s_A Variable lymphocyte rec 99.8 3E-20 1E-24 182.7 16.2 179 109-321 10-189 (208)
95 3cvr_A Invasion plasmid antige 99.8 8.6E-21 2.9E-25 213.4 14.0 216 55-322 34-255 (571)
96 3cvr_A Invasion plasmid antige 99.8 2.7E-20 9.4E-25 209.3 17.2 188 131-345 60-254 (571)
97 2v9t_B SLIT homolog 2 protein 99.8 2.4E-19 8.3E-24 177.8 15.8 160 61-240 7-166 (220)
98 3e6j_A Variable lymphocyte rec 99.8 3.7E-19 1.3E-23 177.7 16.7 161 57-240 13-173 (229)
99 3ogk_B Coronatine-insensitive 99.8 1.5E-21 5E-26 223.5 -3.3 297 81-384 163-525 (592)
100 2v70_A SLIT-2, SLIT homolog 2 99.8 5.1E-19 1.7E-23 175.5 15.0 152 86-240 15-167 (220)
101 3ogk_B Coronatine-insensitive 99.8 1.2E-21 4.1E-26 224.2 -5.8 244 83-329 139-411 (592)
102 1h6t_A Internalin B; cell adhe 99.8 7.4E-19 2.5E-23 182.2 13.8 148 104-287 44-191 (291)
103 2v9t_B SLIT homolog 2 protein 99.8 1.8E-18 6E-23 171.6 15.8 151 109-263 14-164 (220)
104 2xot_A Amphoterin-induced prot 99.8 8.5E-19 2.9E-23 187.7 13.9 151 86-239 22-176 (361)
105 2v70_A SLIT-2, SLIT homolog 2 99.8 2.2E-18 7.5E-23 170.9 15.2 151 109-263 14-165 (220)
106 1h6t_A Internalin B; cell adhe 99.8 1.7E-18 5.8E-23 179.5 15.0 170 81-265 45-214 (291)
107 2xot_A Amphoterin-induced prot 99.8 9.3E-19 3.2E-23 187.3 12.6 153 109-266 21-178 (361)
108 1m9s_A Internalin B; cell inva 99.8 2.1E-18 7.1E-23 196.0 14.8 189 83-287 22-210 (605)
109 3e6j_A Variable lymphocyte rec 99.8 8.1E-18 2.8E-22 167.9 17.0 153 109-290 22-175 (229)
110 1m9s_A Internalin B; cell inva 99.8 3.6E-18 1.2E-22 194.1 15.5 174 80-268 41-214 (605)
111 4b8c_D Glucose-repressible alc 99.8 7.3E-20 2.5E-24 213.1 0.8 188 35-240 132-330 (727)
112 4ezg_A Putative uncharacterize 99.7 1.1E-17 3.7E-22 162.9 12.6 150 82-238 44-193 (197)
113 1xeu_A Internalin C; cellular 99.7 1.5E-18 5.1E-23 177.1 6.6 149 126-287 37-185 (263)
114 4ezg_A Putative uncharacterize 99.7 1E-17 3.6E-22 163.0 12.2 153 103-264 41-194 (197)
115 1xeu_A Internalin C; cellular 99.7 9.4E-18 3.2E-22 171.1 9.1 171 81-267 18-188 (263)
116 1dce_A Protein (RAB geranylger 99.7 2.4E-20 8.2E-25 210.7 -11.8 220 103-357 346-567 (567)
117 2p1m_B Transport inhibitor res 99.7 8.1E-20 2.8E-24 209.0 -8.0 200 81-281 104-345 (594)
118 1dce_A Protein (RAB geranylger 99.7 1.8E-19 6.2E-24 203.5 -6.9 201 151-379 346-567 (567)
119 4b8c_D Glucose-repressible alc 99.7 6.5E-18 2.2E-22 196.7 3.9 185 106-315 173-359 (727)
120 2p1m_B Transport inhibitor res 99.7 4.2E-19 1.4E-23 203.0 -6.1 298 81-384 129-493 (594)
121 4aoj_A High affinity nerve gro 99.7 4.7E-17 1.6E-21 170.8 9.8 89 624-712 41-135 (329)
122 4asz_A BDNF/NT-3 growth factor 99.7 3.9E-17 1.3E-21 169.0 8.7 89 624-712 13-107 (299)
123 2ell_A Acidic leucine-rich nuc 99.7 2.7E-16 9.2E-21 148.7 12.4 133 105-239 23-160 (168)
124 1w8a_A SLIT protein; signaling 99.7 3.5E-16 1.2E-20 151.4 13.2 129 85-216 11-140 (192)
125 1w8a_A SLIT protein; signaling 99.7 5E-16 1.7E-20 150.4 12.8 129 109-240 11-140 (192)
126 2o6r_A Variable lymphocyte rec 99.7 5.4E-16 1.8E-20 148.0 12.8 136 61-216 3-138 (177)
127 4gt4_A Tyrosine-protein kinase 99.6 1.5E-16 5.1E-21 165.3 8.9 87 626-712 28-121 (308)
128 2ell_A Acidic leucine-rich nuc 99.6 5.2E-16 1.8E-20 146.7 10.9 137 81-220 23-164 (168)
129 2je0_A Acidic leucine-rich nuc 99.6 4.6E-16 1.6E-20 143.9 8.7 127 106-234 17-148 (149)
130 2wfh_A SLIT homolog 2 protein 99.6 2.3E-15 7.9E-20 145.8 13.2 126 86-215 14-139 (193)
131 2wfh_A SLIT homolog 2 protein 99.6 3.5E-15 1.2E-19 144.4 13.4 128 109-240 13-140 (193)
132 2je0_A Acidic leucine-rich nuc 99.6 8.7E-16 3E-20 142.0 8.6 129 81-211 16-149 (149)
133 2o6r_A Variable lymphocyte rec 99.6 9.2E-15 3.2E-19 139.4 15.0 130 108-240 9-138 (177)
134 3sb4_A Hypothetical leucine ri 99.6 3.9E-16 1.3E-20 164.7 5.8 278 81-378 24-327 (329)
135 3sb4_A Hypothetical leucine ri 99.6 1.1E-15 3.6E-20 161.4 5.3 260 81-356 48-327 (329)
136 4b9d_A Serine/threonine-protei 99.6 5.6E-15 1.9E-19 155.2 10.1 89 624-712 24-115 (350)
137 3omv_A RAF proto-oncogene seri 99.6 3.6E-15 1.2E-19 154.3 8.1 88 622-712 34-123 (307)
138 4fih_A Serine/threonine-protei 99.6 4.5E-15 1.5E-19 155.7 8.8 89 624-712 74-163 (346)
139 4fie_A Serine/threonine-protei 99.5 1E-14 3.4E-19 157.0 10.1 89 624-712 151-240 (423)
140 4fdw_A Leucine rich hypothetic 99.5 4.5E-13 1.5E-17 144.7 21.9 260 105-383 112-381 (401)
141 3hmm_A TGF-beta receptor type- 99.5 1E-14 3.5E-19 151.6 7.9 84 625-712 4-93 (303)
142 4fdw_A Leucine rich hypothetic 99.5 4E-13 1.4E-17 145.1 20.2 263 82-364 113-384 (401)
143 4aw0_A HPDK1, 3-phosphoinositi 99.5 1.3E-14 4.6E-19 149.8 7.8 89 624-712 32-124 (311)
144 1a9n_A U2A', U2A'; complex (nu 99.5 1.7E-14 5.9E-19 137.4 8.0 133 100-238 13-152 (176)
145 4ase_A Vascular endothelial gr 99.5 1.3E-14 4.6E-19 153.3 7.9 99 614-712 54-161 (353)
146 3fpq_A Serine/threonine-protei 99.5 3.1E-14 1.1E-18 146.2 10.4 86 627-712 29-121 (290)
147 1ds9_A Outer arm dynein; leuci 99.5 1.8E-16 6.2E-21 154.3 -8.5 132 83-219 19-157 (198)
148 1a9n_A U2A', U2A'; complex (nu 99.5 2.5E-14 8.6E-19 136.2 6.4 131 126-262 15-151 (176)
149 4g31_A Eukaryotic translation 99.5 5.7E-14 1.9E-18 145.4 9.3 88 625-712 6-107 (299)
150 3g39_A Variable lymphocyte rec 99.5 2.3E-13 7.8E-18 128.8 12.0 106 85-193 12-117 (170)
151 4g3f_A NF-kappa-beta-inducing 99.5 6.9E-14 2.3E-18 146.2 8.6 85 623-712 57-142 (336)
152 1ds9_A Outer arm dynein; leuci 99.5 1.7E-16 5.8E-21 154.5 -10.5 133 102-239 14-153 (198)
153 3g39_A Variable lymphocyte rec 99.4 5.6E-13 1.9E-17 126.1 12.2 106 108-216 11-116 (170)
154 3hyh_A Carbon catabolite-derep 99.4 1.7E-13 5.7E-18 139.5 9.1 88 624-712 13-104 (275)
155 3ubd_A Ribosomal protein S6 ki 99.4 4.7E-14 1.6E-18 145.6 3.8 89 624-712 24-118 (304)
156 2r9u_A Variable lymphocyte rec 99.4 9.7E-13 3.3E-17 124.9 11.9 104 85-191 15-118 (174)
157 2r9u_A Variable lymphocyte rec 99.4 2.4E-12 8.1E-17 122.2 12.0 104 109-215 15-118 (174)
158 3uto_A Twitchin; kinase, muscl 99.4 1.3E-12 4.3E-17 147.6 11.2 89 624-712 157-246 (573)
159 2c30_A Serine/threonine-protei 99.3 3.2E-12 1.1E-16 134.1 12.2 101 612-712 23-134 (321)
160 2qkw_B Protein kinase; three-h 99.3 5.1E-13 1.8E-17 140.1 5.9 99 614-712 29-127 (321)
161 3uim_A Brassinosteroid insensi 99.3 1.1E-12 3.9E-17 137.7 7.2 104 609-712 15-119 (326)
162 2ifg_A High affinity nerve gro 99.3 3.9E-12 1.3E-16 134.9 9.7 97 93-192 20-117 (347)
163 4b99_A Mitogen-activated prote 99.3 2.8E-12 9.5E-17 137.9 8.4 88 624-712 54-150 (398)
164 2nru_A Interleukin-1 receptor- 99.3 8.3E-12 2.8E-16 129.8 11.7 101 611-712 12-122 (307)
165 3s95_A LIMK-1, LIM domain kina 99.3 9.4E-12 3.2E-16 129.7 11.3 89 624-712 10-99 (310)
166 4f9c_A Cell division cycle 7-r 99.3 7.5E-12 2.6E-16 133.0 10.7 90 621-712 18-112 (361)
167 3fxz_A Serine/threonine-protei 99.3 1.2E-11 4.2E-16 128.1 11.2 90 623-712 19-109 (297)
168 2qol_A Ephrin receptor; recept 99.2 6.4E-12 2.2E-16 134.7 7.4 89 624-712 45-138 (373)
169 4aw2_A Serine/threonine-protei 99.2 6E-12 2E-16 137.4 7.3 99 614-712 64-166 (437)
170 1qcf_A Haematopoetic cell kina 99.2 8.6E-12 2.9E-16 137.4 7.9 94 617-712 181-274 (454)
171 4hcu_A Tyrosine-protein kinase 99.2 1.9E-11 6.5E-16 124.5 9.8 88 624-712 10-97 (269)
172 3fe3_A MAP/microtubule affinit 99.2 2.4E-11 8.2E-16 127.8 10.7 90 623-712 14-106 (328)
173 3v5w_A G-protein coupled recep 99.2 2E-11 6.9E-16 137.5 10.3 89 624-712 189-284 (689)
174 3uqc_A Probable conserved tran 99.2 2.7E-11 9.2E-16 124.8 10.4 89 624-712 31-123 (286)
175 3kul_A Ephrin type-A receptor 99.2 1.5E-11 5.2E-16 129.1 8.6 89 624-712 49-142 (325)
176 3p86_A Serine/threonine-protei 99.2 1.5E-11 5.2E-16 128.1 8.2 94 618-712 31-126 (309)
177 1opk_A P150, C-ABL, proto-onco 99.2 6.7E-12 2.3E-16 139.8 5.8 93 619-712 215-308 (495)
178 3cbl_A C-FES, proto-oncogene t 99.2 1.2E-11 4.1E-16 132.8 7.5 93 620-712 110-204 (377)
179 1k9a_A Carboxyl-terminal SRC k 99.2 1.6E-11 5.6E-16 135.0 8.7 89 621-712 190-279 (450)
180 4fs7_A Uncharacterized protein 99.2 6.7E-10 2.3E-14 119.9 21.3 285 78-382 67-376 (394)
181 2ifg_A High affinity nerve gro 99.2 3E-11 1E-15 128.0 10.4 103 110-215 12-116 (347)
182 2x4f_A Myosin light chain kina 99.2 2E-11 6.8E-16 130.8 8.7 87 626-712 91-178 (373)
183 3qd2_B Eukaryotic translation 99.2 3.4E-11 1.1E-15 126.4 10.3 89 624-712 6-153 (332)
184 3sxs_A Cytoplasmic tyrosine-pr 99.2 1.9E-11 6.6E-16 124.3 8.2 89 623-712 7-95 (268)
185 3gen_A Tyrosine-protein kinase 99.2 3.3E-11 1.1E-15 123.7 9.8 90 622-712 22-111 (283)
186 3v8s_A RHO-associated protein 99.2 1.3E-11 4.5E-16 133.6 6.8 97 616-712 61-161 (410)
187 2psq_A Fibroblast growth facto 99.2 2.1E-11 7.2E-16 130.5 8.4 90 623-712 80-179 (370)
188 3zgw_A Maternal embryonic leuc 99.2 3.4E-11 1.2E-15 127.5 9.9 91 622-712 8-100 (347)
189 2yab_A Death-associated protei 99.2 5.5E-11 1.9E-15 126.6 11.6 90 623-712 11-107 (361)
190 1fmk_A C-SRC, P60-SRC, tyrosin 99.2 1.4E-11 4.7E-16 135.7 7.0 92 619-712 179-270 (452)
191 3ugc_A Tyrosine-protein kinase 99.2 1.8E-11 6.3E-16 126.4 7.5 89 624-712 10-105 (295)
192 3un9_A NLR family member X1; l 99.2 4.3E-13 1.5E-17 143.3 -5.4 110 106-215 72-196 (372)
193 4fvq_A Tyrosine-protein kinase 99.2 2.6E-11 8.9E-16 124.8 8.0 89 624-712 8-104 (289)
194 2vd5_A DMPK protein; serine/th 99.2 2.1E-11 7.2E-16 132.1 7.6 99 614-712 51-153 (412)
195 3vhe_A Vascular endothelial gr 99.2 1.5E-11 5.1E-16 131.0 6.3 99 614-712 12-119 (359)
196 3hko_A Calcium/calmodulin-depe 99.2 2.9E-11 9.9E-16 127.9 8.5 93 620-712 22-120 (345)
197 1kob_A Twitchin; kinase, intra 99.2 6.2E-11 2.1E-15 127.5 11.0 89 624-712 51-140 (387)
198 1luf_A Muscle-specific tyrosin 99.2 2.5E-11 8.5E-16 128.3 7.7 94 619-712 42-142 (343)
199 2h8h_A Proto-oncogene tyrosine 99.2 1.7E-11 5.8E-16 137.9 6.8 93 618-712 261-353 (535)
200 2ac3_A MAP kinase-interacting 99.2 1.1E-10 3.8E-15 121.8 12.5 88 625-712 13-103 (316)
201 3un9_A NLR family member X1; l 99.2 9.2E-13 3.1E-17 140.8 -3.5 135 82-216 72-225 (372)
202 3f3z_A Calcium/calmodulin-depe 99.2 5.7E-11 1.9E-15 121.5 9.8 89 624-712 9-98 (277)
203 2y0a_A Death-associated protei 99.2 1E-10 3.4E-15 122.9 11.9 89 624-712 11-106 (326)
204 3c0i_A Peripheral plasma membr 99.2 5.7E-11 1.9E-15 126.2 9.8 89 624-712 24-118 (351)
205 1tki_A Titin; serine kinase, m 99.2 9.3E-11 3.2E-15 122.9 11.3 89 623-712 4-93 (321)
206 3kmu_A ILK, integrin-linked ki 99.2 2.3E-11 7.8E-16 123.7 6.4 88 624-712 10-101 (271)
207 1o6l_A RAC-beta serine/threoni 99.2 5.9E-11 2E-15 125.2 9.7 89 624-712 5-97 (337)
208 2clq_A Mitogen-activated prote 99.2 8E-11 2.7E-15 121.4 10.3 88 625-712 23-111 (295)
209 3tki_A Serine/threonine-protei 99.2 5.6E-11 1.9E-15 124.7 9.2 89 624-712 7-97 (323)
210 4eqm_A Protein kinase; transfe 99.1 7.8E-11 2.7E-15 121.8 10.2 89 624-712 11-103 (294)
211 3a62_A Ribosomal protein S6 ki 99.1 5.1E-11 1.7E-15 125.2 8.9 90 623-712 16-113 (327)
212 3t9t_A Tyrosine-protein kinase 99.1 3.7E-11 1.3E-15 122.0 7.5 89 623-712 7-95 (267)
213 4euu_A Serine/threonine-protei 99.1 9.4E-11 3.2E-15 122.6 10.6 89 624-712 9-101 (319)
214 3l9p_A Anaplastic lymphoma kin 99.1 3.4E-11 1.1E-15 128.8 7.2 90 623-712 70-166 (367)
215 2w4o_A Calcium/calmodulin-depe 99.1 7.1E-11 2.4E-15 125.3 9.4 88 623-712 52-140 (349)
216 2ivs_A Proto-oncogene tyrosine 99.1 3.2E-11 1.1E-15 125.6 6.4 91 622-712 21-118 (314)
217 1x8b_A WEE1HU, WEE1-like prote 99.1 1.1E-10 3.8E-15 119.7 10.3 90 623-712 10-103 (289)
218 2bdw_A Hypothetical protein K1 99.1 9.7E-11 3.3E-15 124.9 10.1 89 624-712 29-120 (362)
219 1p4o_A Insulin-like growth fac 99.1 3.1E-11 1E-15 126.4 6.0 99 614-712 15-120 (322)
220 3uc3_A Serine/threonine-protei 99.1 1.2E-10 4E-15 124.3 10.5 89 623-712 19-108 (361)
221 2i1m_A Macrophage colony-stimu 99.1 5.1E-11 1.8E-15 125.4 7.6 95 618-712 40-142 (333)
222 1qpc_A LCK kinase; alpha beta 99.1 6.1E-11 2.1E-15 121.4 7.9 89 622-712 11-99 (279)
223 2jam_A Calcium/calmodulin-depe 99.1 1.1E-10 3.8E-15 121.1 9.8 89 624-712 9-98 (304)
224 3soc_A Activin receptor type-2 99.1 5.5E-11 1.9E-15 124.7 7.5 89 622-712 22-114 (322)
225 3gni_B Strad alpha; kinase fol 99.1 1.2E-10 4E-15 125.5 10.4 90 623-712 24-118 (389)
226 3lxl_A Tyrosine-protein kinase 99.1 1.2E-10 4E-15 122.3 10.0 89 624-712 23-118 (327)
227 1fot_A TPK1 delta, CAMP-depend 99.1 8.6E-11 3E-15 122.9 8.8 89 624-712 6-98 (318)
228 2j7t_A Serine/threonine-protei 99.1 1.2E-10 4.1E-15 120.6 9.7 90 623-712 18-108 (302)
229 3bhy_A Death-associated protei 99.1 1.7E-10 5.8E-15 118.3 10.7 89 624-712 5-100 (283)
230 3kfa_A Tyrosine-protein kinase 99.1 4.1E-11 1.4E-15 123.2 6.0 93 619-712 8-101 (288)
231 3dtc_A Mitogen-activated prote 99.1 8.6E-11 2.9E-15 119.7 8.3 89 623-712 6-98 (271)
232 3is5_A Calcium-dependent prote 99.1 1.3E-10 4.4E-15 119.5 9.7 89 624-712 22-112 (285)
233 1t46_A HOMO sapiens V-KIT hard 99.1 5.3E-11 1.8E-15 123.9 6.6 92 621-712 20-119 (313)
234 2buj_A Serine/threonine-protei 99.1 1E-10 3.5E-15 122.1 8.6 91 622-712 27-122 (317)
235 3a8x_A Protein kinase C IOTA t 99.1 1.5E-10 5.2E-15 122.5 10.0 89 624-712 9-102 (345)
236 3niz_A Rhodanese family protei 99.1 1.2E-10 4.1E-15 121.4 8.9 89 623-712 20-110 (311)
237 3txo_A PKC-L, NPKC-ETA, protei 99.1 1.5E-10 5.1E-15 122.9 9.7 91 622-712 21-116 (353)
238 2a2a_A Death-associated protei 99.1 2.6E-10 8.8E-15 119.4 11.4 89 624-712 12-107 (321)
239 3eqc_A Dual specificity mitoge 99.1 1.4E-10 4.8E-15 123.5 9.5 89 624-712 33-123 (360)
240 2pvf_A Fibroblast growth facto 99.1 1E-10 3.5E-15 123.2 8.2 91 622-712 33-133 (334)
241 2wqm_A Serine/threonine-protei 99.1 2.1E-10 7.3E-15 119.3 10.4 89 624-712 32-124 (310)
242 4e5w_A Tyrosine-protein kinase 99.1 2E-10 7E-15 118.8 10.2 89 624-712 21-117 (302)
243 1rjb_A FL cytokine receptor; k 99.1 7.3E-11 2.5E-15 124.8 6.9 94 619-712 40-141 (344)
244 1xjd_A Protein kinase C, theta 99.1 1.3E-10 4.4E-15 123.0 8.7 92 621-712 14-110 (345)
245 2pmi_A Negative RE, cyclin-dep 99.1 1.7E-10 5.7E-15 120.6 9.5 89 623-712 4-94 (317)
246 3qup_A Tyrosine-protein kinase 99.1 8E-11 2.7E-15 123.3 7.0 94 619-712 18-123 (323)
247 1rdq_E PKA C-alpha, CAMP-depen 99.1 1.6E-10 5.3E-15 122.6 9.3 89 624-712 41-133 (350)
248 3tt0_A Basic fibroblast growth 99.1 1.1E-10 3.8E-15 125.4 8.2 90 623-712 68-167 (382)
249 4eut_A Serine/threonine-protei 99.1 1.6E-10 5.6E-15 124.8 9.5 89 624-712 9-101 (396)
250 4fr4_A YANK1, serine/threonine 99.1 1.2E-10 4E-15 125.0 8.1 89 624-712 15-107 (384)
251 3gxj_A TGF-beta receptor type- 99.1 1.8E-10 6.3E-15 119.1 9.2 85 624-712 3-93 (303)
252 2w1i_A JAK2; chromosomal rearr 99.1 1.6E-10 5.6E-15 121.2 8.9 89 624-712 41-136 (326)
253 2h6d_A 5'-AMP-activated protei 99.1 2.6E-10 8.9E-15 116.4 10.1 90 623-712 10-103 (276)
254 3q5i_A Protein kinase; CDPK, m 99.1 3E-10 1E-14 126.9 11.4 90 623-712 35-138 (504)
255 2eva_A TAK1 kinase - TAB1 chim 99.1 9.8E-11 3.3E-15 121.8 6.9 84 624-712 8-91 (307)
256 3kk8_A Calcium/calmodulin depe 99.1 3.3E-10 1.1E-14 116.1 10.7 90 623-712 5-97 (284)
257 3soa_A Calcium/calmodulin-depe 99.1 1.4E-10 4.9E-15 126.9 8.3 90 623-712 10-102 (444)
258 4agu_A Cyclin-dependent kinase 99.1 3.1E-10 1E-14 118.1 10.4 89 624-712 3-94 (311)
259 3lxp_A Non-receptor tyrosine-p 99.1 3.6E-10 1.2E-14 118.1 11.0 87 626-712 33-127 (318)
260 3cok_A Serine/threonine-protei 99.1 1.6E-10 5.6E-15 118.1 8.1 89 624-712 11-103 (278)
261 2ozo_A Tyrosine-protein kinase 99.1 2.1E-10 7.2E-15 130.9 9.8 81 631-712 343-427 (613)
262 4dc2_A Protein kinase C IOTA t 99.1 2.2E-10 7.4E-15 123.4 9.4 90 623-712 51-145 (396)
263 3kn6_A Ribosomal protein S6 ki 99.1 3.9E-10 1.3E-14 118.3 11.0 81 629-712 16-98 (325)
264 2zv2_A Calcium/calmodulin-depe 99.1 1.3E-10 4.4E-15 120.2 7.3 89 623-711 12-129 (298)
265 2rku_A Serine/threonine-protei 99.1 3E-10 1E-14 117.2 10.0 89 624-712 15-107 (294)
266 1phk_A Phosphorylase kinase; g 99.1 3.5E-10 1.2E-14 116.8 10.3 90 623-712 16-116 (298)
267 2yfx_A Tyrosine-protein kinase 99.1 1.4E-10 4.6E-15 121.9 7.2 90 623-712 29-125 (327)
268 2acx_A G protein-coupled recep 99.1 2.3E-10 7.8E-15 128.3 9.4 90 623-712 183-276 (576)
269 1ob3_A PFPK5, cell division co 99.1 2.6E-10 8.9E-15 117.4 9.2 88 624-712 2-91 (288)
270 2h34_A Serine/threonine-protei 99.1 3.3E-10 1.1E-14 117.9 10.0 90 623-712 33-126 (309)
271 3fdn_A Serine/threonine-protei 99.1 2.2E-10 7.5E-15 117.3 8.5 90 623-712 8-101 (279)
272 3ork_A Serine/threonine protei 99.1 8.9E-11 3E-15 122.4 5.5 89 624-712 12-108 (311)
273 2y94_A 5'-AMP-activated protei 99.1 1.8E-10 6.2E-15 127.1 8.2 89 624-712 16-108 (476)
274 1u5q_A Serine/threonine protei 99.1 2.6E-10 8.7E-15 120.9 9.1 87 625-712 55-145 (348)
275 3a7i_A MST3 kinase, serine/thr 99.1 4.3E-10 1.5E-14 116.6 10.6 89 624-712 22-112 (303)
276 1mqb_A Ephrin type-A receptor 99.1 2.2E-10 7.6E-15 120.6 8.5 89 624-712 44-138 (333)
277 3e7e_A HBUB1, BUB1A, mitotic c 99.0 2.6E-10 8.8E-15 121.8 9.0 89 621-712 62-159 (365)
278 3lij_A Calcium/calmodulin depe 99.0 3.6E-10 1.2E-14 125.8 10.5 89 624-712 37-128 (494)
279 2owb_A Serine/threonine-protei 99.0 3.4E-10 1.2E-14 119.3 9.8 90 623-712 40-133 (335)
280 2xir_A Vascular endothelial gr 99.0 1.8E-10 6.3E-15 120.0 7.6 99 614-712 17-124 (316)
281 2yex_A Serine/threonine-protei 99.0 2.6E-10 9E-15 116.3 8.6 89 624-712 7-97 (276)
282 2w5a_A Serine/threonine-protei 99.0 4.1E-10 1.4E-14 115.1 9.9 89 624-712 6-99 (279)
283 1u59_A Tyrosine-protein kinase 99.0 4.7E-10 1.6E-14 115.3 10.1 87 625-712 10-101 (287)
284 2i0e_A Protein kinase C-beta I 99.0 3E-10 1E-14 120.5 8.8 91 622-712 18-113 (353)
285 4ejn_A RAC-alpha serine/threon 99.0 1.2E-10 4E-15 128.0 5.7 90 623-712 147-240 (446)
286 3nyv_A Calmodulin-domain prote 99.0 4E-10 1.4E-14 125.1 10.1 89 624-712 26-118 (484)
287 1zy4_A Serine/threonine-protei 99.0 2.9E-10 1E-14 117.5 8.3 88 624-712 6-107 (303)
288 2pml_X PFPK7, Ser/Thr protein 99.0 1.1E-10 3.7E-15 123.6 5.1 87 623-710 30-133 (348)
289 3p1a_A MYT1 kinase, membrane-a 99.0 2.4E-10 8.2E-15 119.1 7.6 88 624-712 57-148 (311)
290 3q4u_A Activin receptor type-1 99.0 5.7E-10 1.9E-14 115.4 10.4 86 623-712 7-98 (301)
291 3h4j_B AMPK kdaid, SNF1-like p 99.0 2.4E-10 8.3E-15 120.4 7.6 88 624-712 9-100 (336)
292 3i6u_A CDS1, serine/threonine- 99.0 2.4E-10 8.2E-15 124.4 7.8 89 623-712 134-231 (419)
293 1t4h_A Serine/threonine-protei 99.0 6.9E-10 2.4E-14 114.2 10.7 88 625-712 27-121 (290)
294 3com_A Serine/threonine-protei 99.0 5.7E-10 1.9E-14 116.2 10.2 89 622-712 27-116 (314)
295 1mp8_A Focal adhesion kinase 1 99.0 3.3E-10 1.1E-14 116.1 8.2 89 623-712 14-107 (281)
296 2vwi_A Serine/threonine-protei 99.0 1.4E-10 4.8E-15 120.0 5.5 92 621-712 12-105 (303)
297 4f0f_A Serine/threonine-protei 99.0 4E-10 1.4E-14 115.8 8.8 88 623-712 18-113 (287)
298 1xbb_A Tyrosine-protein kinase 99.0 2.9E-10 9.9E-15 117.2 7.8 89 623-712 15-109 (291)
299 4fl3_A Tyrosine-protein kinase 99.0 3.9E-10 1.3E-14 129.1 9.6 82 630-712 375-461 (635)
300 1fvr_A Tyrosine-protein kinase 99.0 4.7E-10 1.6E-14 117.7 9.3 89 624-712 25-118 (327)
301 2vgo_A Serine/threonine-protei 99.0 3.9E-10 1.3E-14 115.7 8.4 89 624-712 14-106 (284)
302 3c4z_A Rhodopsin kinase; Ser/T 99.0 4E-10 1.4E-14 126.0 9.1 90 623-712 184-277 (543)
303 2x7f_A TRAF2 and NCK-interacti 99.0 3.2E-10 1.1E-14 118.8 8.0 98 614-712 14-119 (326)
304 2y7j_A Phosphorylase B kinase 99.0 6.7E-10 2.3E-14 118.5 10.5 91 622-712 92-192 (365)
305 3pg1_A Mitogen-activated prote 99.0 3.9E-10 1.3E-14 120.1 8.4 97 615-712 13-125 (362)
306 3gbz_A Kinase, CMGC CDK; ssgci 99.0 3.3E-10 1.1E-14 119.1 7.7 89 623-712 33-124 (329)
307 3mwu_A Calmodulin-domain prote 99.0 5.6E-10 1.9E-14 124.0 9.8 89 624-712 22-113 (486)
308 2r5t_A Serine/threonine-protei 99.0 2.8E-10 9.5E-15 121.7 7.0 89 624-712 38-131 (373)
309 2i6l_A Mitogen-activated prote 99.0 4.9E-10 1.7E-14 116.8 8.8 88 624-712 11-113 (320)
310 3c1x_A Hepatocyte growth facto 99.0 2.4E-10 8.1E-15 122.3 6.4 87 626-712 91-183 (373)
311 2wei_A Calmodulin-domain prote 99.0 7.3E-10 2.5E-14 113.9 9.8 89 624-712 22-113 (287)
312 2a19_B Interferon-induced, dou 99.0 3.7E-10 1.3E-14 115.7 7.5 85 624-712 11-112 (284)
313 3o0g_A Cell division protein k 99.0 6.9E-10 2.3E-14 114.4 9.6 87 624-711 2-91 (292)
314 1byg_A CSK, protein (C-termina 99.0 3.4E-10 1.2E-14 115.8 7.2 87 623-712 20-107 (278)
315 2eue_A Carbon catabolite derep 99.0 8.6E-10 3E-14 112.5 10.1 88 624-712 13-104 (275)
316 4fs7_A Uncharacterized protein 99.0 7.9E-09 2.7E-13 111.4 18.1 263 78-360 90-376 (394)
317 1vzo_A Ribosomal protein S6 ki 99.0 2.8E-10 9.6E-15 121.0 6.4 89 624-712 54-151 (355)
318 3brb_A Proto-oncogene tyrosine 99.0 2.8E-10 9.7E-15 118.5 6.2 95 617-711 27-132 (313)
319 2qr7_A Ribosomal protein S6 ki 99.0 6.2E-10 2.1E-14 117.6 8.9 86 623-712 21-108 (342)
320 2ycf_A Serine/threonine-protei 99.0 4.6E-10 1.6E-14 117.5 7.7 88 624-712 10-106 (322)
321 3poz_A Epidermal growth factor 99.0 6.2E-10 2.1E-14 116.9 8.5 88 624-712 15-108 (327)
322 3llt_A Serine/threonine kinase 99.0 5.8E-10 2E-14 118.7 8.4 99 612-712 23-127 (360)
323 4aaa_A Cyclin-dependent kinase 99.0 7.5E-10 2.6E-14 116.4 9.0 88 624-711 25-115 (331)
324 3f66_A Hepatocyte growth facto 99.0 6E-10 2.1E-14 115.1 8.0 89 624-712 25-119 (298)
325 2r3i_A Cell division protein k 99.0 1E-09 3.5E-14 113.3 9.8 88 624-712 3-93 (299)
326 3cc6_A Protein tyrosine kinase 99.0 8.2E-10 2.8E-14 113.1 8.6 89 623-712 11-104 (281)
327 3pls_A Macrophage-stimulating 99.0 8.2E-10 2.8E-14 114.0 8.5 87 626-712 23-115 (298)
328 1b6c_B TGF-B superfamily recep 99.0 1.2E-09 4E-14 115.3 9.7 86 623-712 41-132 (342)
329 3mdy_A Bone morphogenetic prot 99.0 1.2E-09 4.1E-14 114.9 9.5 86 623-712 36-127 (337)
330 3mtl_A Cell division protein k 98.9 3.9E-10 1.3E-14 118.3 5.1 88 624-712 2-91 (324)
331 3nsz_A CK II alpha, casein kin 98.9 1.8E-09 6.1E-14 113.3 10.2 86 624-712 36-125 (330)
332 2izr_A Casein kinase I isoform 98.9 9.2E-10 3.2E-14 115.6 8.0 86 624-712 9-96 (330)
333 3dls_A PAS domain-containing s 98.9 4.1E-10 1.4E-14 118.7 5.2 90 623-712 23-122 (335)
334 3dbq_A Dual specificity protei 98.9 1.4E-09 4.9E-14 114.9 9.3 89 623-712 8-100 (343)
335 4gt6_A Cell surface protein; l 98.9 3.6E-08 1.2E-12 106.2 20.1 280 84-382 66-367 (394)
336 3eb0_A Putative uncharacterize 98.9 1.4E-09 4.7E-14 116.9 8.8 87 621-712 4-129 (383)
337 3og7_A AKAP9-BRAF fusion prote 98.9 1.4E-09 4.7E-14 111.9 7.9 88 622-712 22-111 (289)
338 3lm5_A Serine/threonine-protei 98.9 1.8E-09 6E-14 113.4 8.8 90 623-712 27-121 (327)
339 3n9x_A Phosphotransferase; mal 98.9 1.6E-09 5.3E-14 118.5 8.6 89 623-712 25-121 (432)
340 3kex_A Receptor tyrosine-prote 98.9 8.7E-10 3E-14 115.6 6.1 88 624-712 13-106 (325)
341 2zmd_A Dual specificity protei 98.9 2.1E-09 7.2E-14 115.7 9.3 88 624-712 56-147 (390)
342 1ua2_A CAK, cell division prot 98.9 1.3E-09 4.4E-14 115.4 7.4 89 623-712 9-103 (346)
343 2pzi_A Probable serine/threoni 98.9 9E-10 3.1E-14 127.6 6.7 89 624-712 80-176 (681)
344 2wtk_C Serine/threonine-protei 98.9 1.8E-09 6E-14 111.9 8.0 87 624-711 5-98 (305)
345 3an0_A Dual specificity mitoge 98.9 2.4E-09 8.1E-14 112.9 9.1 90 622-712 49-141 (340)
346 2j0j_A Focal adhesion kinase 1 98.9 1.4E-09 4.8E-14 124.9 7.9 91 621-712 387-482 (656)
347 3byv_A Rhoptry kinase; malaria 98.9 5.9E-10 2E-14 119.5 4.4 89 623-712 72-191 (377)
348 3rp9_A Mitogen-activated prote 98.9 1.3E-09 4.5E-14 120.0 7.2 88 624-712 53-148 (458)
349 3lb7_A RAF proto-oncogene seri 98.9 1.5E-09 5.1E-14 112.9 7.2 87 623-712 35-123 (307)
350 3ll6_A Cyclin G-associated kin 98.9 1.7E-09 5.6E-14 113.7 7.6 89 623-712 27-125 (337)
351 1u46_A ACK-1, activated CDC42 98.9 1.3E-09 4.5E-14 112.0 6.7 88 624-712 18-112 (291)
352 2vuw_A Serine/threonine-protei 98.9 1.4E-09 4.7E-14 114.6 6.9 87 624-711 20-153 (336)
353 1nxk_A MAP kinase-activated pr 98.9 2.6E-09 8.9E-14 115.4 9.1 83 625-712 62-151 (400)
354 3fme_A Dual specificity mitoge 98.9 3.1E-09 1.1E-13 109.1 8.7 89 623-712 6-97 (290)
355 3oz6_A Mitogen-activated prote 98.9 3.1E-09 1.1E-13 114.3 9.1 89 623-712 8-102 (388)
356 3m2w_A MAP kinase-activated pr 98.9 3.9E-09 1.4E-13 109.1 9.4 83 625-712 18-107 (299)
357 1cm8_A Phosphorylated MAP kina 98.9 1.4E-09 4.8E-14 116.1 5.9 89 623-712 24-121 (367)
358 4gt6_A Cell surface protein; l 98.9 6.2E-08 2.1E-12 104.3 19.0 287 78-382 83-388 (394)
359 2xrw_A Mitogen-activated prote 98.9 3.5E-09 1.2E-13 113.2 9.0 89 623-712 24-121 (371)
360 3lzb_A Epidermal growth factor 98.9 3.4E-09 1.2E-13 111.2 8.5 89 623-712 14-108 (327)
361 3mi9_A Cell division protein k 98.9 3.8E-09 1.3E-13 111.9 9.0 88 624-712 17-115 (351)
362 2y4i_B KSR2, HKSR2, kinase sup 98.8 5.2E-10 1.8E-14 116.7 2.0 94 617-712 26-121 (319)
363 3aln_A Dual specificity mitoge 98.8 5.7E-09 2E-13 109.3 9.9 89 623-712 21-112 (327)
364 2b9h_A MAP kinase FUS3, mitoge 98.8 3.7E-09 1.3E-13 112.0 8.5 89 623-712 10-105 (353)
365 3g2f_A Bone morphogenetic prot 98.8 7.1E-09 2.4E-13 109.0 10.5 86 623-712 12-104 (336)
366 3cek_A Dual specificity protei 98.8 1.7E-09 5.9E-14 112.5 5.7 98 614-712 18-119 (313)
367 3pfq_A PKC-B, PKC-beta, protei 98.8 2.8E-09 9.7E-14 122.8 7.9 91 622-712 339-434 (674)
368 3ttj_A Mitogen-activated prote 98.8 2.2E-09 7.6E-14 118.3 6.6 88 623-711 61-157 (464)
369 3g33_A Cell division protein k 98.8 5.6E-09 1.9E-13 108.4 9.2 89 623-712 8-110 (308)
370 3rgf_A Cyclin-dependent kinase 98.8 5.4E-09 1.8E-13 113.1 9.3 81 629-712 26-111 (405)
371 1csn_A Casein kinase-1; phosph 98.8 6.9E-09 2.4E-13 106.9 9.6 87 623-712 9-97 (298)
372 2rio_A Serine/threonine-protei 98.8 4.5E-09 1.5E-13 114.8 8.6 83 626-712 17-100 (434)
373 3qyz_A Mitogen-activated prote 98.8 4.9E-09 1.7E-13 111.7 8.3 89 623-712 26-121 (364)
374 1blx_A Cyclin-dependent kinase 98.8 4.2E-09 1.4E-13 110.2 7.6 90 622-712 9-110 (326)
375 2jii_A Serine/threonine-protei 98.8 2E-09 6.8E-14 114.2 5.0 83 624-712 42-149 (352)
376 2iwi_A Serine/threonine-protei 98.8 1.5E-09 5E-14 113.0 3.9 91 622-712 29-131 (312)
377 3p23_A Serine/threonine-protei 98.8 5E-09 1.7E-13 114.3 7.9 87 622-712 22-109 (432)
378 2v62_A Serine/threonine-protei 98.8 3.1E-09 1.1E-13 112.4 6.0 88 624-712 37-143 (345)
379 4exu_A Mitogen-activated prote 98.8 4.9E-09 1.7E-13 112.1 7.5 89 623-712 41-138 (371)
380 3op5_A Serine/threonine-protei 98.8 4.9E-09 1.7E-13 111.7 7.1 90 622-712 33-143 (364)
381 3qa8_A MGC80376 protein; kinas 98.8 8.7E-10 3E-14 125.1 1.2 89 624-712 14-110 (676)
382 2fst_X Mitogen-activated prote 98.8 3E-09 1E-13 113.5 4.9 89 623-712 28-125 (367)
383 3e3p_A Protein kinase, putativ 98.8 1.2E-08 4.2E-13 108.2 9.6 90 618-709 17-114 (360)
384 3coi_A Mitogen-activated prote 98.8 5.9E-09 2E-13 110.5 6.8 88 624-712 24-120 (353)
385 2ra8_A Uncharacterized protein 98.8 2.5E-09 8.7E-14 113.2 3.9 134 198-335 168-321 (362)
386 3fhr_A MAP kinase-activated pr 98.8 1.7E-08 5.7E-13 106.3 9.8 85 623-712 27-118 (336)
387 3en9_A Glycoprotease, O-sialog 98.7 2.3E-08 7.8E-13 112.1 10.4 85 627-712 339-431 (540)
388 2ra8_A Uncharacterized protein 98.7 3.9E-09 1.3E-13 111.8 3.8 183 82-287 107-320 (362)
389 1j1b_A Glycogen synthase kinas 98.7 1.5E-08 5.3E-13 110.1 8.4 82 625-711 55-143 (420)
390 3kvw_A DYRK2, dual specificity 98.7 2.7E-08 9.4E-13 108.4 9.8 87 624-712 97-190 (429)
391 3uzp_A CKI-delta, CKID, casein 98.7 3.6E-08 1.2E-12 101.4 10.1 87 623-712 8-96 (296)
392 3q60_A ROP5B; pseudokinase, tr 98.7 2E-08 7E-13 107.2 8.4 88 623-712 61-179 (371)
393 1z57_A Dual specificity protei 98.7 1.8E-08 6E-13 105.8 7.6 87 624-712 14-108 (339)
394 4e7w_A Glycogen synthase kinas 98.7 1.8E-08 6.3E-13 108.5 7.4 80 624-707 40-125 (394)
395 1wak_A Serine/threonine-protei 98.7 1.8E-08 6.3E-13 108.3 6.9 86 624-711 37-135 (397)
396 3a99_A Proto-oncogene serine/t 98.7 1.1E-08 3.8E-13 106.8 4.8 91 622-712 41-141 (320)
397 2dyl_A Dual specificity mitoge 98.7 3.8E-08 1.3E-12 102.3 8.9 86 623-709 24-112 (318)
398 4hgt_A Casein kinase I isoform 98.6 5.1E-08 1.7E-12 100.2 8.7 87 623-712 8-96 (296)
399 3sv0_A Casein kinase I-like; t 98.6 1E-07 3.5E-12 105.2 10.4 87 623-712 6-94 (483)
400 1q8y_A SR protein kinase; tran 98.6 3.2E-08 1.1E-12 105.5 5.9 87 624-712 19-121 (373)
401 1zar_A RIO2 kinase; serine kin 98.6 7.7E-08 2.6E-12 98.4 7.9 88 618-709 84-189 (282)
402 2vx3_A Dual specificity tyrosi 98.6 8.4E-08 2.9E-12 102.8 8.3 89 622-712 52-147 (382)
403 4h09_A Hypothetical leucine ri 98.6 4.3E-06 1.5E-10 89.2 21.6 278 82-379 46-340 (379)
404 2eu9_A Dual specificity protei 98.5 1.3E-07 4.5E-12 99.8 7.5 88 623-712 18-113 (355)
405 4h09_A Hypothetical leucine ri 98.4 2.7E-05 9.4E-10 82.9 23.1 270 77-366 64-348 (379)
406 4azs_A Methyltransferase WBDD; 98.3 3.3E-07 1.1E-11 103.2 6.2 81 632-712 242-334 (569)
407 1io0_A Tropomodulin; LRR prote 98.3 1.1E-07 3.7E-12 90.8 1.1 92 100-191 30-136 (185)
408 1io0_A Tropomodulin; LRR prote 98.3 1E-07 3.4E-12 91.0 -0.3 92 124-215 30-136 (185)
409 3rw6_A Nuclear RNA export fact 98.2 6.5E-08 2.2E-12 97.2 -2.5 105 126-232 137-257 (267)
410 3rw6_A Nuclear RNA export fact 98.2 1.4E-06 4.8E-11 87.5 5.5 103 104-208 139-257 (267)
411 1zth_A RIO1 serine protein kin 98.0 4.5E-06 1.6E-10 84.0 4.9 82 626-711 49-164 (258)
412 3dzo_A Rhoptry kinase domain; 97.7 2.3E-05 7.9E-10 84.6 5.9 58 622-679 76-137 (413)
413 4gyi_A RIO2 kinase; protein ki 97.7 6.5E-06 2.2E-10 87.0 0.7 84 625-710 96-201 (397)
414 3e4g_A ATP synthase subunit S, 97.6 1.6E-05 5.5E-10 74.1 2.0 34 83-116 62-95 (176)
415 3e4g_A ATP synthase subunit S, 97.6 3E-05 1E-09 72.3 3.8 83 106-188 61-149 (176)
416 3rfe_A Platelet glycoprotein I 97.1 0.00056 1.9E-08 60.6 5.9 58 325-389 12-72 (130)
417 3tm0_A Aminoglycoside 3'-phosp 97.1 0.0011 3.8E-08 66.3 8.7 87 623-710 13-100 (263)
418 3d1u_A Putative fructosamine-3 97.1 0.00067 2.3E-08 69.1 7.1 76 628-707 19-97 (288)
419 3rfe_A Platelet glycoprotein I 96.8 0.0017 6E-08 57.3 6.5 57 277-334 11-68 (130)
420 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00039 1.3E-08 66.0 1.7 41 103-143 38-83 (197)
421 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00044 1.5E-08 65.6 1.5 62 82-143 41-111 (197)
422 1nd4_A Aminoglycoside 3'-phosp 96.6 0.0017 5.8E-08 64.5 5.3 81 625-708 21-103 (264)
423 2k1k_A Ephrin type-A receptor 94.2 0.049 1.7E-06 36.1 3.7 30 555-584 6-35 (38)
424 3f7w_A Putative fructosamine-3 93.6 0.11 3.8E-06 52.4 7.2 78 626-707 17-97 (288)
425 3dxp_A Putative acyl-COA dehyd 92.9 0.062 2.1E-06 56.1 4.2 78 629-707 43-128 (359)
426 2ks1_B Epidermal growth factor 92.5 0.19 6.5E-06 34.4 4.5 12 561-572 12-23 (44)
427 2l2t_A Receptor tyrosine-prote 92.0 0.17 5.9E-06 34.5 3.8 8 561-568 11-18 (44)
428 2jwa_A Receptor tyrosine-prote 90.7 0.32 1.1E-05 33.1 4.1 28 560-588 12-39 (44)
429 3jr1_A Putative fructosamine-3 90.6 0.61 2.1E-05 47.5 8.3 75 629-707 41-118 (312)
430 4gkh_A Aminoglycoside 3'-phosp 89.3 0.9 3.1E-05 44.8 8.3 77 631-710 31-110 (272)
431 2olc_A MTR kinase, methylthior 88.6 0.51 1.7E-05 49.9 6.2 75 629-705 35-120 (397)
432 3cxl_A N-chimerin; SH2, RHO-GA 86.6 0.084 2.9E-06 57.3 -1.5 60 629-691 147-215 (463)
433 3ovc_A Hygromycin-B 4-O-kinase 84.0 2.3 7.8E-05 44.2 8.1 73 629-707 46-121 (362)
434 3r70_A Aminoglycoside phosphot 83.5 1.3 4.3E-05 45.2 5.8 74 625-708 38-115 (320)
435 3tdw_A Gentamicin resistance p 79.7 3 0.0001 42.1 6.9 74 630-709 25-102 (306)
436 3ats_A Putative uncharacterize 78.1 0.88 3E-05 47.1 2.4 79 630-708 26-121 (357)
437 2ks1_B Epidermal growth factor 74.6 3.5 0.00012 28.1 3.7 22 560-581 8-29 (44)
438 2l2t_A Receptor tyrosine-prote 73.0 3.4 0.00012 28.1 3.3 20 561-580 8-27 (44)
439 2k9y_A Ephrin type-A receptor 70.2 3.1 0.00011 27.9 2.7 13 565-577 15-27 (41)
440 2q83_A YTAA protein; 2635576, 66.3 7.5 0.00026 39.4 6.1 73 630-707 38-118 (346)
441 3sg8_A APH(2'')-ID; antibiotic 63.0 3.1 0.00011 41.8 2.3 75 629-709 25-105 (304)
442 2l34_A TYRO protein tyrosine k 58.6 9.3 0.00032 24.2 3.0 22 558-579 5-26 (33)
443 2klu_A T-cell surface glycopro 50.5 17 0.00058 26.8 3.7 18 565-582 12-29 (70)
444 1zyl_A Hypothetical protein YI 50.0 31 0.0011 34.5 7.4 74 631-706 33-113 (328)
445 2knc_B Integrin beta-3; transm 44.3 20 0.00068 27.9 3.6 16 563-578 11-26 (79)
446 2pyw_A Uncharacterized protein 41.5 31 0.0011 36.2 5.9 73 629-704 39-122 (420)
447 1afo_A Glycophorin A; integral 40.7 46 0.0016 21.7 4.1 22 560-581 10-31 (40)
448 2k1k_A Ephrin type-A receptor 40.4 48 0.0016 21.7 4.4 30 558-587 5-35 (38)
449 2jwa_A Receptor tyrosine-prote 37.7 34 0.0012 23.2 3.4 31 561-591 9-39 (44)
450 2lz0_A Uncharacterized protein 37.5 58 0.002 26.4 5.7 40 121-161 11-50 (100)
451 3csv_A Aminoglycoside phosphot 35.7 81 0.0028 31.5 7.8 76 631-711 25-103 (333)
452 1nw1_A Choline kinase (49.2 KD 35.3 54 0.0018 34.5 6.6 72 630-707 79-159 (429)
453 2ppq_A HSK, HK, homoserine kin 34.8 79 0.0027 31.3 7.6 75 630-707 28-110 (322)
454 2lz0_A Uncharacterized protein 32.2 86 0.0029 25.3 5.9 42 97-139 11-52 (100)
455 3feg_A Choline/ethanolamine ki 29.2 51 0.0018 34.1 5.0 73 630-707 56-137 (379)
456 2knc_A Integrin alpha-IIB; tra 22.9 1E+02 0.0035 21.9 3.9 17 566-582 16-32 (54)
457 3i1a_A Spectinomycin phosphotr 20.8 1.8E+02 0.0062 29.1 7.3 68 633-707 32-108 (339)
458 2k9j_B Integrin beta-3; transm 20.5 1.1E+02 0.0036 20.6 3.5 16 562-577 9-24 (43)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.3e-42 Score=404.55 Aligned_cols=339 Identities=26% Similarity=0.397 Sum_probs=296.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCCCCCCC-CCCCCCCceeecCCCCCCCCCcceeEEEcCCCCCccc---cC------
Q 005120 30 SITDPIEVSALRSIKKSLVDDYSKLSNWNRG-DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGN---LS------ 99 (713)
Q Consensus 30 ~~~~~~~~~~l~~~~~~~~~~~~~l~~w~~~-~~C~~~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~---~~------ 99 (713)
..+.+.|++||++||+.+.|+. .+.+|... |+| .|.||+|+. .+|+.|+|+++.+.|. ++
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~-~l~~W~~~~~~C--~w~gv~C~~-------~~v~~L~L~~~~l~g~~~~l~~~l~~L 76 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKN-LLPDWSSNKNPC--TFDGVTCRD-------DKVTSIDLSSKPLNVGFSAVSSSLLSL 76 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTT-SSTTCCTTSCGG--GSTTEEEET-------TEEEEEECTTSCCCEEHHHHHHHTTTC
T ss_pred ccCCHHHHHHHHHHHhhCCCcc-cccCCCCCCCCc--CCcceEECC-------CcEEEEECCCCCcCCccCccChhHhcc
Confidence 3445789999999999999887 89999755 566 799999962 5899999999888876 33
Q ss_pred -----------------ccccCCCCCCEEECCCCCCCcCCCc--cccCCCCCceEecccCCCCCcCCccC-CCCCCCCEE
Q 005120 100 -----------------PEIGRLSYLTILDFMWNKISGSIPK--EIGNIKSLELLLLNGNELTGSLPEEL-GYLPKLDRI 159 (713)
Q Consensus 100 -----------------~~~~~l~~L~~L~Ls~n~i~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L 159 (713)
+.++.+++|++|+|++|.+++.+|. .++++++|++|+|++|.+++..|..+ .++++|++|
T Consensus 77 ~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 156 (768)
T 3rgz_A 77 TGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVL 156 (768)
T ss_dssp TTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEE
T ss_pred CcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEE
Confidence 5678889999999999999988888 89999999999999999988888776 889999999
Q ss_pred EccccCCCCCCchh---hhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccc
Q 005120 160 QIDQNYISGSLPKS---FANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNN 236 (713)
Q Consensus 160 ~L~~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 236 (713)
+|++|++++..|.. +.++++|++|++++|.+.+..+. ..+++|++|++++|++++.+|. ++.+++|++|++++|
T Consensus 157 ~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n 233 (768)
T 3rgz_A 157 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGN 233 (768)
T ss_dssp ECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSS
T ss_pred ECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCC
Confidence 99999999888877 78899999999999999877654 7899999999999999988877 999999999999999
Q ss_pred cCCCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccc--cCccEEEccCCcCcccCC
Q 005120 237 NFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIP 314 (713)
Q Consensus 237 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~N~l~~~~p 314 (713)
++++ .+|..+.++++|++|++++|++++..|.. .+++|++|++++|.+++.+|..... ++|++|+|++|++++.+|
T Consensus 234 ~l~~-~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p 311 (768)
T 3rgz_A 234 KLSG-DFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311 (768)
T ss_dssp CCCS-CHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCC
T ss_pred cCCC-cccHHHhcCCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccc
Confidence 9997 78999999999999999999999888865 8899999999999999999987655 789999999999999999
Q ss_pred hhccCCcccceeecccccCcccCCch-hhhhccCCCCCccEEEccCCcCCCc-CCCCC-CC-CceEEEecCCCCCCCC
Q 005120 315 SNFSGLPRLQRLFIANNSLSGSIPSS-IWQSRTLNATETFILDFQNNNLTNI-SGSFN-IP-PNVTVRLRGNPFCLNT 388 (713)
Q Consensus 315 ~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~~~~l~~~~L~~L~ls~N~l~~i-~~~~~-~~-~l~~l~l~~N~~~~~~ 388 (713)
..|+.+++|++|++++|+++|.+|.. +. .+++|+.|++++|++++. +..+. ++ +++.|++++|.+.+..
T Consensus 312 ~~~~~l~~L~~L~L~~n~l~~~ip~~~l~-----~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~ 384 (768)
T 3rgz_A 312 PFFGSCSLLESLALSSNNFSGELPMDTLL-----KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEEEECCHHHHT-----TCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEEC
T ss_pred hHHhcCCCccEEECCCCcccCcCCHHHHh-----cCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCc
Confidence 99999999999999999999999977 66 788999999999999854 44443 44 8899999999887654
No 2
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5e-41 Score=353.50 Aligned_cols=295 Identities=30% Similarity=0.498 Sum_probs=238.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCCCC-CCCCCCCceeecCCCCCCCCCcceeEEEcCCCCCcc--ccCccccCCCC
Q 005120 31 ITDPIEVSALRSIKKSLVDDYSKLSNWNRG-DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSG--NLSPEIGRLSY 107 (713)
Q Consensus 31 ~~~~~~~~~l~~~~~~~~~~~~~l~~w~~~-~~C~~~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~--~~~~~~~~l~~ 107 (713)
.|.+.|++||++||+.+.++. .+.+|... |+|.+.|.||.|+... ...+|+.|+++++++++ .+|+.++++++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~---~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~ 77 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDT---QTYRVNNLDLSGLNLPKPYPIPSSLANLPY 77 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSS---SCCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCCCCCCcCCCcceEeCCCC---CCceEEEEECCCCCccCCcccChhHhCCCC
Confidence 367889999999999998765 68899765 6775569999996432 12589999999999998 88999999999
Q ss_pred CCEEECCC-CCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEcc
Q 005120 108 LTILDFMW-NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMN 186 (713)
Q Consensus 108 L~~L~Ls~-n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 186 (713)
|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|.+++.+|..|.++++|++|+++
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 99999995 99998999999999999999999999998999999999999999999999998899999999999999999
Q ss_pred CCccccccchhcCCCC-CccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCcc
Q 005120 187 NNSISGQIPPELSRLP-SLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 265 (713)
Q Consensus 187 ~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 265 (713)
+|.+++.+|..+..++ +|++|++++|++++.+|..+..++ |++|++++|++++ ..|..+..+++|++|++++|++++
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEG-DASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEE-CCGGGCCTTSCCSEEECCSSEECC
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccC-cCCHHHhcCCCCCEEECCCCceee
Confidence 9999988898888887 899999999999888888888886 8888888888887 677778888888888888888877
Q ss_pred CCCCCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccCCcccceeeccccc
Q 005120 266 PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNS 332 (713)
Q Consensus 266 ~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 332 (713)
.++.+..+++|++|++++|++++.+|..+.. ++|+.|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 236 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp BGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred ecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 6666666667777777666666555554322 45555555555555555544 555555555555555
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.9e-40 Score=381.19 Aligned_cols=337 Identities=21% Similarity=0.290 Sum_probs=294.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCC--------CCCCCCCCC-CCCCCCC---ceeecCCCCCCCCCcceeEEEcCCCCCcccc
Q 005120 31 ITDPIEVSALRSIKKSLVDDY--------SKLSNWNRG-DPCTSNW---TGVLCFNTTMDDGYLHLRELQLLNLNLSGNL 98 (713)
Q Consensus 31 ~~~~~~~~~l~~~~~~~~~~~--------~~l~~w~~~-~~C~~~w---~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~~ 98 (713)
.+...|+.||.++++++..+. +...+|... ++| .| .||.|+.. .+|+.|+|+++++.|.+
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c--~w~~~~GV~C~~~------~~V~~L~L~~~~l~g~l 97 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD--MWGAQPGVSLNSN------GRVTGLSLEGFGASGRV 97 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG--GTTCCTTEEECTT------CCEEEEECTTSCCEEEE
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc--cccCCCCeEEcCC------CCEEEEEecCcccCCcC
Confidence 344578999999999986542 223479865 555 69 99999642 58999999999999999
Q ss_pred CccccCCCCCCEEECCCCC-------------------------------------------------------------
Q 005120 99 SPEIGRLSYLTILDFMWNK------------------------------------------------------------- 117 (713)
Q Consensus 99 ~~~~~~l~~L~~L~Ls~n~------------------------------------------------------------- 117 (713)
|+.+++|++|++|+|++|.
T Consensus 98 p~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~ 177 (636)
T 4eco_A 98 PDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK 177 (636)
T ss_dssp CGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC
T ss_pred ChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccc
Confidence 9999999999999999984
Q ss_pred -----------------CCcCCCccccCCCCCceEecccCCCCCc-----------------CCccCC--CCCCCCEEEc
Q 005120 118 -----------------ISGSIPKEIGNIKSLELLLLNGNELTGS-----------------LPEELG--YLPKLDRIQI 161 (713)
Q Consensus 118 -----------------i~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~L 161 (713)
+++ +|..|+++++|++|+|++|.+++. +|+.+. ++++|++|+|
T Consensus 178 ~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L 256 (636)
T 4eco_A 178 SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEV 256 (636)
T ss_dssp CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEe
Confidence 345 788999999999999999999986 999999 9999999999
Q ss_pred cccCCCCCCchhhhcCCCCCEEEccCCc-ccc-ccchhcCCC------CCccEEecccCCCcCCCCc--CCCCCCCCcEE
Q 005120 162 DQNYISGSLPKSFANLNKTRHFHMNNNS-ISG-QIPPELSRL------PSLVHMLLDNNNLTGYLPP--ELSELPKLLIL 231 (713)
Q Consensus 162 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l------~~L~~L~L~~N~l~~~~~~--~l~~l~~L~~L 231 (713)
++|.+.+.+|..|.++++|++|++++|+ +++ .+|..++.+ ++|++|++++|+++ .+|. .++.+++|++|
T Consensus 257 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L 335 (636)
T 4eco_A 257 YNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGML 335 (636)
T ss_dssp ECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEE
T ss_pred cCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEE
Confidence 9999999999999999999999999998 998 889988876 99999999999999 7888 89999999999
Q ss_pred EcccccCCCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCC-ccEEEccCCCCcccCCCCccc---cCccEEEccCC
Q 005120 232 QLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPN-LGYLDLSSNQLNGSIPPGRLS---LNITTIKLSNN 307 (713)
Q Consensus 232 ~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~-L~~L~Ls~N~l~~~ip~~~~~---~~L~~L~Ls~N 307 (713)
++++|+++| .+| .+..+++|++|++++|+++..+..+..+++ |+.|++++|.++ .+|..+.. .+|+.|++++|
T Consensus 336 ~L~~N~l~g-~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N 412 (636)
T 4eco_A 336 ECLYNQLEG-KLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYN 412 (636)
T ss_dssp ECCSCCCEE-ECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSS
T ss_pred eCcCCcCcc-chh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCC
Confidence 999999997 788 899999999999999999965558888999 999999999999 88876444 37999999999
Q ss_pred cCcccCChhcc-------CCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCCC--CC------
Q 005120 308 KLTGTIPSNFS-------GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFN--IP------ 372 (713)
Q Consensus 308 ~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~--~~------ 372 (713)
++++.+|..|. .+++|+.|++++|+++ .+|..++. .+++|+.|++++|+++.++.... ..
T Consensus 413 ~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~----~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l 487 (636)
T 4eco_A 413 EIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFS----TGSPLSSINLMGNMLTEIPKNSLKDENENFKNT 487 (636)
T ss_dssp CTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHH----TTCCCSEEECCSSCCSBCCSSSSEETTEECTTG
T ss_pred cCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHc----cCCCCCEEECCCCCCCCcCHHHhcccccccccc
Confidence 99999999888 8889999999999999 67777653 57889999999999998876543 22
Q ss_pred -CceEEEecCCCCC
Q 005120 373 -PNVTVRLRGNPFC 385 (713)
Q Consensus 373 -~l~~l~l~~N~~~ 385 (713)
+++.|+|++|.+.
T Consensus 488 ~~L~~L~Ls~N~l~ 501 (636)
T 4eco_A 488 YLLTSIDLRFNKLT 501 (636)
T ss_dssp GGCCEEECCSSCCC
T ss_pred CCccEEECcCCcCC
Confidence 8899999999887
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.7e-39 Score=381.75 Aligned_cols=336 Identities=21% Similarity=0.291 Sum_probs=285.6
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCCCCCCCCCC------CCCCCCCC------------ceeecCCCCCCCCCcceeEEEcC
Q 005120 29 DSITDPIEVSALRSIKKSLVDDYSKLSNWNR------GDPCTSNW------------TGVLCFNTTMDDGYLHLRELQLL 90 (713)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~w~~------~~~C~~~w------------~gv~C~~~~~~~~~~~l~~L~l~ 90 (713)
++.+...|+.||++||+.+.++ +|+. .+||.|.| .||.|+.. .+|+.|+|+
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~------~~V~~L~Ls 331 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNN------GRVTGLSLA 331 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTT------SCEEEEECT
T ss_pred ccccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCC------CCEEEEECc
Confidence 3344567899999999999765 6753 35744589 99999642 689999999
Q ss_pred CCCCccccCccccCCCCCCEEEC-CCCCCCcC------------------------------------------------
Q 005120 91 NLNLSGNLSPEIGRLSYLTILDF-MWNKISGS------------------------------------------------ 121 (713)
Q Consensus 91 ~~~l~~~~~~~~~~l~~L~~L~L-s~n~i~~~------------------------------------------------ 121 (713)
++++.|.+|+.+++|++|++|+| ++|.+.|.
T Consensus 332 ~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~ 411 (876)
T 4ecn_A 332 GFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRN 411 (876)
T ss_dssp TTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTC
T ss_pred cCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhC
Confidence 99999999999999999999999 77754433
Q ss_pred ----------------------------CCccccCCCCCceEecccCCCCC-----------------cCCccCC--CCC
Q 005120 122 ----------------------------IPKEIGNIKSLELLLLNGNELTG-----------------SLPEELG--YLP 154 (713)
Q Consensus 122 ----------------------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~ 154 (713)
+|..|+++++|++|+|++|++++ .+|+.++ +++
T Consensus 412 ~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~ 491 (876)
T 4ecn_A 412 PEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLK 491 (876)
T ss_dssp TTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCT
T ss_pred ccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCC
Confidence 78889999999999999999998 3899988 999
Q ss_pred CCCEEEccccCCCCCCchhhhcCCCCCEEEccCCc-ccc-ccchhcCCCC-------CccEEecccCCCcCCCCc--CCC
Q 005120 155 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS-ISG-QIPPELSRLP-------SLVHMLLDNNNLTGYLPP--ELS 223 (713)
Q Consensus 155 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~~~~~~--~l~ 223 (713)
+|++|+|++|.+.+.+|..|.++++|++|++++|+ +++ .+|..+..++ +|++|++++|+++ .+|. .++
T Consensus 492 ~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~ 570 (876)
T 4ecn_A 492 DLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQ 570 (876)
T ss_dssp TCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHT
T ss_pred CCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhh
Confidence 99999999999999999999999999999999998 888 7887666554 9999999999999 7888 899
Q ss_pred CCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCC-ccEEEccCCCCcccCCCCccc---cCc
Q 005120 224 ELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPN-LGYLDLSSNQLNGSIPPGRLS---LNI 299 (713)
Q Consensus 224 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~-L~~L~Ls~N~l~~~ip~~~~~---~~L 299 (713)
.+++|+.|++++|+++ .+| .++.+++|+.|+|++|+++..+..+..+++ |+.|+|++|.++ .+|..+.. .+|
T Consensus 571 ~L~~L~~L~Ls~N~l~--~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L 646 (876)
T 4ecn_A 571 KMVKLGLLDCVHNKVR--HLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVM 646 (876)
T ss_dssp TCTTCCEEECTTSCCC--BCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCE
T ss_pred cCCCCCEEECCCCCcc--cch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCC
Confidence 9999999999999998 577 899999999999999999954448888998 999999999999 78865443 349
Q ss_pred cEEEccCCcCcccCChhc---c--CCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCCC-C--
Q 005120 300 TTIKLSNNKLTGTIPSNF---S--GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFN-I-- 371 (713)
Q Consensus 300 ~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~-~-- 371 (713)
+.|+|++|++++.+|... . .+++|+.|+|++|+++ .+|..++. .+++|+.|+|++|+|+.++.... .
T Consensus 647 ~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~----~l~~L~~L~Ls~N~L~~ip~~~~~~~~ 721 (876)
T 4ecn_A 647 GSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFA----TGSPISTIILSNNLMTSIPENSLKPKD 721 (876)
T ss_dssp EEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHH----TTCCCSEEECCSCCCSCCCTTSSSCTT
T ss_pred CEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHc----cCCCCCEEECCCCcCCccChHHhcccc
Confidence 999999999998766432 2 3458999999999998 78877653 57889999999999998876543 2
Q ss_pred ------CCceEEEecCCCCC
Q 005120 372 ------PPNVTVRLRGNPFC 385 (713)
Q Consensus 372 ------~~l~~l~l~~N~~~ 385 (713)
++++.|+|++|.+.
T Consensus 722 ~~l~nl~~L~~L~Ls~N~L~ 741 (876)
T 4ecn_A 722 GNYKNTYLLTTIDLRFNKLT 741 (876)
T ss_dssp SCCTTGGGCCEEECCSSCCC
T ss_pred ccccccCCccEEECCCCCCc
Confidence 27889999999886
No 5
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.2e-38 Score=373.69 Aligned_cols=235 Identities=32% Similarity=0.496 Sum_probs=146.2
Q ss_pred CCcceeEEEcCCCCCccccCcc-ccCCCCCCEEECCCCCCCcCCCccccCCC-CCceEecccCCCCCcCCccCCC--CCC
Q 005120 80 GYLHLRELQLLNLNLSGNLSPE-IGRLSYLTILDFMWNKISGSIPKEIGNIK-SLELLLLNGNELTGSLPEELGY--LPK 155 (713)
Q Consensus 80 ~~~~l~~L~l~~~~l~~~~~~~-~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~ 155 (713)
.+.+++.|++++|.+++.+|.. +..+++|++|++++|++++.+|..+.+++ +|++|++++|++++.+|..+.. +++
T Consensus 316 ~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 395 (768)
T 3rgz_A 316 SCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT 395 (768)
T ss_dssp GCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCC
T ss_pred cCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCC
Confidence 3567888888888888877765 78888888888888888877887777665 6666666666666655555554 555
Q ss_pred CCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEccc
Q 005120 156 LDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDN 235 (713)
Q Consensus 156 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 235 (713)
|++|++++|++++.+|..|.++++|++|++++|.+++.+|..+..+++|++|++++|++++.+|..+..+++|++|++++
T Consensus 396 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 475 (768)
T 3rgz_A 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 475 (768)
T ss_dssp CCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCS
T ss_pred ccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecC
Confidence 66666666666555555565666666666666665555555555555555555555555555555555555555555555
Q ss_pred ccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccC
Q 005120 236 NNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTI 313 (713)
Q Consensus 236 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~ 313 (713)
|++++ .+|..+.++++|++|+|++|++++..| .+..+++|+.|++++|+++|.+|..+.. ++|+.|++++|+++|.+
T Consensus 476 N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~i 554 (768)
T 3rgz_A 476 NDLTG-EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554 (768)
T ss_dssp SCCCS-CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBC
T ss_pred CcccC-cCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcC
Confidence 55555 455555555555555555555555544 4555555555555555555555544332 45555555555555444
Q ss_pred Ch
Q 005120 314 PS 315 (713)
Q Consensus 314 p~ 315 (713)
|.
T Consensus 555 p~ 556 (768)
T 3rgz_A 555 PA 556 (768)
T ss_dssp CG
T ss_pred Ch
Confidence 43
No 6
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.7e-37 Score=342.64 Aligned_cols=323 Identities=17% Similarity=0.221 Sum_probs=266.9
Q ss_pred CCCCCCCceeecCCCC---CCCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCC-CccccCCCCCceEe
Q 005120 61 DPCTSNWTGVLCFNTT---MDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSI-PKEIGNIKSLELLL 136 (713)
Q Consensus 61 ~~C~~~w~gv~C~~~~---~~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~-p~~~~~l~~L~~L~ 136 (713)
..|.+.+..+.|.... ++.-..+++.|++++|.+++..|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3454344458887543 2333468999999999999988999999999999999999997555 66799999999999
Q ss_pred cccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchh--hhcCCCCCEEEccCCccccccchh-cCCCCCccEEecccCC
Q 005120 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKS--FANLNKTRHFHMNNNSISGQIPPE-LSRLPSLVHMLLDNNN 213 (713)
Q Consensus 137 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~ 213 (713)
|++|++++..|..|.++++|++|+|++|++++..+.. |.++++|++|++++|.+.+..|.. +..+++|++|++++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999999999999999999999999999866665 999999999999999999887876 8899999999999999
Q ss_pred CcCCCCcCCCCC----------------------------------CCCcEEEcccccCCCCCCccccc-----------
Q 005120 214 LTGYLPPELSEL----------------------------------PKLLILQLDNNNFEGTTIPASYS----------- 248 (713)
Q Consensus 214 l~~~~~~~l~~l----------------------------------~~L~~L~L~~N~l~~~~~~~~~~----------- 248 (713)
+++..+..+..+ ++|++|++++|++++ ..|..+.
T Consensus 166 l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~-~~~~~~~~~~~~~~L~~L 244 (455)
T 3v47_A 166 VKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKE-SMAKRFFDAIAGTKIQSL 244 (455)
T ss_dssp BSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCH-HHHHHHHHHTTTCCEEEE
T ss_pred ccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccc-cchhhhhccccccceeeE
Confidence 998888776654 567778887777654 2222221
Q ss_pred ----------------------------CCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc-cC
Q 005120 249 ----------------------------NMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LN 298 (713)
Q Consensus 249 ----------------------------~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~ 298 (713)
..++|++|++++|++++..| .+..+++|+.|++++|++++..|..+.. ++
T Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 324 (455)
T 3v47_A 245 ILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTH 324 (455)
T ss_dssp ECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred eeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCccc
Confidence 12578888888888888776 6888899999999999998655554333 78
Q ss_pred ccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCC--CCCCceE
Q 005120 299 ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVT 376 (713)
Q Consensus 299 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~--~~~~l~~ 376 (713)
|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+. .+++|+.|++++|+|+++++.. .+++++.
T Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 399 (455)
T 3v47_A 325 LLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFL-----GLPNLKELALDTNQLKSVPDGIFDRLTSLQK 399 (455)
T ss_dssp CCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTT-----TCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcc-----ccccccEEECCCCccccCCHhHhccCCcccE
Confidence 99999999999888888899999999999999999888788887 6788999999999999887644 3788899
Q ss_pred EEecCCCCCCCCC
Q 005120 377 VRLRGNPFCLNTN 389 (713)
Q Consensus 377 l~l~~N~~~~~~~ 389 (713)
|++++|++.|+++
T Consensus 400 L~l~~N~l~~~~~ 412 (455)
T 3v47_A 400 IWLHTNPWDCSCP 412 (455)
T ss_dssp EECCSSCBCCCTT
T ss_pred EEccCCCcccCCC
Confidence 9999999988874
No 7
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=338.62 Aligned_cols=321 Identities=22% Similarity=0.245 Sum_probs=287.0
Q ss_pred CCCC--CCceeecCCCCC---CC-CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceE
Q 005120 62 PCTS--NWTGVLCFNTTM---DD-GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELL 135 (713)
Q Consensus 62 ~C~~--~w~gv~C~~~~~---~~-~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L 135 (713)
.|.| .|..|.|....+ +. -..+++.|++++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|
T Consensus 6 ~C~C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 85 (477)
T 2id5_A 6 RCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTL 85 (477)
T ss_dssp TCEEETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCeECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEE
Confidence 4544 578999976542 22 23579999999999999888999999999999999999999889999999999999
Q ss_pred ecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCc
Q 005120 136 LLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT 215 (713)
Q Consensus 136 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 215 (713)
+|++|+++...+..|.++++|++|+|++|++.+..+..|.++++|++|++++|.+.+..+..|..+++|++|++++|+++
T Consensus 86 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 86 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp ECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred ECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 99999999887788999999999999999999999999999999999999999999998999999999999999999999
Q ss_pred CCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCc
Q 005120 216 GYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGR 294 (713)
Q Consensus 216 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~ 294 (713)
+..+..+..+++|+.|++++|.+++ ..+..+..+++|++|++++|.+.+..+ ......+|+.|++++|.++ .+|...
T Consensus 166 ~~~~~~l~~l~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~ 243 (477)
T 2id5_A 166 SIPTEALSHLHGLIVLRLRHLNINA-IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLA 243 (477)
T ss_dssp SCCHHHHTTCTTCCEEEEESCCCCE-ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-SCCHHH
T ss_pred ccChhHhcccCCCcEEeCCCCcCcE-eChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-ccCHHH
Confidence 8777789999999999999999986 566789999999999999998776555 5555679999999999999 666543
Q ss_pred cc--cCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCC--C
Q 005120 295 LS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--N 370 (713)
Q Consensus 295 ~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~--~ 370 (713)
+. ++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..+. .+++|+.|++++|+|+++++.. .
T Consensus 244 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~~ 318 (477)
T 2id5_A 244 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFR-----GLNYLRVLNVSGNQLTTLEESVFHS 318 (477)
T ss_dssp HTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBT-----TCTTCCEEECCSSCCSCCCGGGBSC
T ss_pred hcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhc-----CcccCCEEECCCCcCceeCHhHcCC
Confidence 33 7899999999999999889999999999999999999998888887 7899999999999999988653 3
Q ss_pred CCCceEEEecCCCCCCCCC
Q 005120 371 IPPNVTVRLRGNPFCLNTN 389 (713)
Q Consensus 371 ~~~l~~l~l~~N~~~~~~~ 389 (713)
+++++.|++++|+|.|++.
T Consensus 319 l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 319 VGNLETLILDSNPLACDCR 337 (477)
T ss_dssp GGGCCEEECCSSCEECSGG
T ss_pred CcccCEEEccCCCccCccc
Confidence 7889999999999998874
No 8
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=8.1e-35 Score=335.67 Aligned_cols=288 Identities=24% Similarity=0.300 Sum_probs=254.7
Q ss_pred CCccccCccccCCCCCCEEECCCCCCCcC-----------------CCcccc--CCCCCceEecccCCCCCcCCccCCCC
Q 005120 93 NLSGNLSPEIGRLSYLTILDFMWNKISGS-----------------IPKEIG--NIKSLELLLLNGNELTGSLPEELGYL 153 (713)
Q Consensus 93 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l 153 (713)
++++ +|+.++++++|++|+|++|.+++. +|..++ ++++|++|+|++|.+.+.+|+.++++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 3445 788999999999999999999986 999999 99999999999999999999999999
Q ss_pred CCCCEEEccccC-CCC-CCchhhhcC------CCCCEEEccCCccccccch--hcCCCCCccEEecccCCCcCCCCcCCC
Q 005120 154 PKLDRIQIDQNY-ISG-SLPKSFANL------NKTRHFHMNNNSISGQIPP--ELSRLPSLVHMLLDNNNLTGYLPPELS 223 (713)
Q Consensus 154 ~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~l~ 223 (713)
++|++|+|++|+ +++ .+|..++++ ++|++|++++|+++ .+|. .++.+++|++|++++|+++|.+| .+.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999998 998 899999887 99999999999999 7888 89999999999999999998899 899
Q ss_pred CCCCCcEEEcccccCCCCCCcccccCCCC-CCEEEccCCCCccCCCCCCCCC--CccEEEccCCCCcccCCCCcc-----
Q 005120 224 ELPKLLILQLDNNNFEGTTIPASYSNMSK-LLKLSLRNCSLQGPMPDLSRIP--NLGYLDLSSNQLNGSIPPGRL----- 295 (713)
Q Consensus 224 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~l~~l~--~L~~L~Ls~N~l~~~ip~~~~----- 295 (713)
.+++|++|++++|+++ .+|..+..+++ |++|++++|+++..+..+..++ +|+.|++++|.+++.+|..+.
T Consensus 351 ~l~~L~~L~L~~N~l~--~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~ 428 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT--EIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPT 428 (636)
T ss_dssp EEEEESEEECCSSEEE--ECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSS
T ss_pred CCCCCCEEECCCCccc--cccHhhhhhcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcCCCcchhhhcccccc
Confidence 9999999999999998 68889999999 9999999999995544565544 899999999999988876544
Q ss_pred --c-cCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhcc---CCCCCccEEEccCCcCCCcCCCC
Q 005120 296 --S-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT---LNATETFILDFQNNNLTNISGSF 369 (713)
Q Consensus 296 --~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~---l~~~~L~~L~ls~N~l~~i~~~~ 369 (713)
. .+|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|...+.... -++++|+.|++++|+++.++..+
T Consensus 429 ~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~ 507 (636)
T 4eco_A 429 PFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDF 507 (636)
T ss_dssp CCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCCBCCGGG
T ss_pred cccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCCccChhh
Confidence 2 58999999999999665566778999999999999999 88876653210 01238999999999999988654
Q ss_pred ---CCCCceEEEecCCCCCC
Q 005120 370 ---NIPPNVTVRLRGNPFCL 386 (713)
Q Consensus 370 ---~~~~l~~l~l~~N~~~~ 386 (713)
.+++++.|+|++|++.+
T Consensus 508 ~~~~l~~L~~L~Ls~N~l~~ 527 (636)
T 4eco_A 508 RATTLPYLVGIDLSYNSFSK 527 (636)
T ss_dssp STTTCTTCCEEECCSSCCSS
T ss_pred hhccCCCcCEEECCCCCCCC
Confidence 58899999999999976
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=5.9e-34 Score=327.53 Aligned_cols=136 Identities=18% Similarity=0.220 Sum_probs=74.1
Q ss_pred ccccCCCCCCEEEccCCCCccCCC--CCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcc-cCChhccCC
Q 005120 245 ASYSNMSKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTG-TIPSNFSGL 320 (713)
Q Consensus 245 ~~~~~l~~L~~L~L~~N~l~~~~~--~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~-~~p~~~~~l 320 (713)
..+..+++|++|++++|++.+..+ .+..+++|+.|++++|.+++.+|..+.. ++|++|++++|++++ .+|..|..+
T Consensus 393 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 472 (606)
T 3vq2_A 393 ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANT 472 (606)
T ss_dssp CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC
T ss_pred hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccC
Confidence 345556667777777777666554 4566666666666666666544443222 455555555555554 245555555
Q ss_pred cccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCC-CCC-CCCceEEEecCCCCC
Q 005120 321 PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG-SFN-IPPNVTVRLRGNPFC 385 (713)
Q Consensus 321 ~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~-~~~-~~~l~~l~l~~N~~~ 385 (713)
++|+.|++++|++++..|..+. .+++|+.|++++|+++++.+ .+. +++++.|++++|++.
T Consensus 473 ~~L~~L~Ls~n~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 473 TNLTFLDLSKCQLEQISWGVFD-----TLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTT-----TCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CCCCEEECCCCcCCccChhhhc-----ccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 5555555555555555555444 44555555555555555422 222 444555555555543
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.4e-33 Score=324.29 Aligned_cols=318 Identities=19% Similarity=0.180 Sum_probs=244.6
Q ss_pred CCCCC--CCceeecCCCCC---CC-CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCce
Q 005120 61 DPCTS--NWTGVLCFNTTM---DD-GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLEL 134 (713)
Q Consensus 61 ~~C~~--~w~gv~C~~~~~---~~-~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~ 134 (713)
..|.| .+..+.|.+... +. -..+++.|++++|.+++..|..|+++++|++|+|++|++.+..|.+|.++++|++
T Consensus 6 ~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 85 (606)
T 3t6q_A 6 QKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDT 85 (606)
T ss_dssp CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCe
Confidence 34543 255688865432 22 2347899999999999888889999999999999999999888999999999999
Q ss_pred EecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCC
Q 005120 135 LLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNL 214 (713)
Q Consensus 135 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 214 (713)
|+|++|++++..|..|.++++|++|++++|++++..+..|.++++|++|++++|.+.+.....+..+++|++|++++|++
T Consensus 86 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 165 (606)
T 3t6q_A 86 LVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAI 165 (606)
T ss_dssp EECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCC
T ss_pred eeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcc
Confidence 99999999988899999999999999999999987788899999999999999999875545555689999999999999
Q ss_pred cCCCCcCCCCCCCCc--EEEcccccCCCCCCcccccCC------------------------------------------
Q 005120 215 TGYLPPELSELPKLL--ILQLDNNNFEGTTIPASYSNM------------------------------------------ 250 (713)
Q Consensus 215 ~~~~~~~l~~l~~L~--~L~L~~N~l~~~~~~~~~~~l------------------------------------------ 250 (713)
++..+..++.+++|+ .|++++|.+++ ..|..+...
T Consensus 166 ~~~~~~~~~~l~~L~~l~L~l~~n~l~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~ 244 (606)
T 3t6q_A 166 HYLSKEDMSSLQQATNLSLNLNGNDIAG-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDIS 244 (606)
T ss_dssp CEECHHHHHTTTTCCSEEEECTTCCCCE-ECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCC
T ss_pred cccChhhhhhhcccceeEEecCCCccCc-cChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccC
Confidence 887777788888888 78888888775 333332210
Q ss_pred ---------CCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccC
Q 005120 251 ---------SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSG 319 (713)
Q Consensus 251 ---------~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~ 319 (713)
.+|+.|++++|.+++..+ .+..+++|++|++++|.++ .+|..+.. ++|++|++++|++++..|..+..
T Consensus 245 ~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 323 (606)
T 3t6q_A 245 PAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASN 323 (606)
T ss_dssp GGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGG
T ss_pred hhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhc
Confidence 156677777777777666 4777777888888888777 66665433 67777888877777777777777
Q ss_pred CcccceeecccccCcccCCch-hhhhccCCCCCccEEEccCCcCCCcC---CCC-CCCCceEEEecCCCCC
Q 005120 320 LPRLQRLFIANNSLSGSIPSS-IWQSRTLNATETFILDFQNNNLTNIS---GSF-NIPPNVTVRLRGNPFC 385 (713)
Q Consensus 320 l~~L~~L~L~~N~l~~~~p~~-~~~~~~l~~~~L~~L~ls~N~l~~i~---~~~-~~~~l~~l~l~~N~~~ 385 (713)
+++|+.|++++|++.+.+|.. +. .+++|+.|++++|+++++. ..+ .++++++|++++|.+.
T Consensus 324 l~~L~~L~l~~n~~~~~~~~~~~~-----~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 389 (606)
T 3t6q_A 324 FPSLTHLSIKGNTKRLELGTGCLE-----NLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPL 389 (606)
T ss_dssp CTTCSEEECCSCSSCCBCCSSTTT-----TCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCE
T ss_pred cCcCCEEECCCCCcccccchhhhh-----ccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCC
Confidence 777777777777777666654 43 5667777777777777653 223 2666777777777654
No 11
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.2e-33 Score=324.84 Aligned_cols=300 Identities=20% Similarity=0.264 Sum_probs=272.0
Q ss_pred ceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEcc
Q 005120 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (713)
Q Consensus 83 ~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 162 (713)
+++.|++++|.+++..+..|+.+++|++|++++|+++ .+|..+..+++|++|++++|.+++..|..+..+++|++|+++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 7999999999999888888999999999999999999 788899999999999999999999889999999999999999
Q ss_pred ccCCCCCCch-hhhcCCCCCEEEccCCcccccc--chhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCC
Q 005120 163 QNYISGSLPK-SFANLNKTRHFHMNNNSISGQI--PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (713)
Q Consensus 163 ~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 239 (713)
+|.+.+.+|. .+.++++|++|++++|.+.+.. +..+..+++|++|++++|++++..|..+..+++|++|++++|+++
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 9999866654 5899999999999999999776 778999999999999999999999999999999999999999998
Q ss_pred CCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCccc-CCC-Cccc--cCccEEEccCCcCcccCC
Q 005120 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGS-IPP-GRLS--LNITTIKLSNNKLTGTIP 314 (713)
Q Consensus 240 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~-ip~-~~~~--~~L~~L~Ls~N~l~~~~p 314 (713)
+...+..+..+++|++|++++|.+++..+ .+..+++|+.|++++|++++. ++. ..+. ++|+.|++++|++++..|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 493 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECT
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccCh
Confidence 73344558999999999999999998877 688999999999999999863 222 1222 799999999999999999
Q ss_pred hhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCC-C-CCCceEEEecCCCCCCCCC
Q 005120 315 SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-N-IPPNVTVRLRGNPFCLNTN 389 (713)
Q Consensus 315 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~-~-~~~l~~l~l~~N~~~~~~~ 389 (713)
..|..+++|+.|++++|++++..|..+. .++.| .|++++|+++++++.. . +++++.+++++|+|.|+|.
T Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-----~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 494 HAFTSLKMMNHVDLSHNRLTSSSIEALS-----HLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCCGGGGGGGT-----TCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred hhhccccCCCEEECCCCccCcCChhHhC-----ccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 9999999999999999999999999888 77889 9999999999987653 3 7889999999999998874
No 12
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.9e-34 Score=319.88 Aligned_cols=107 Identities=20% Similarity=0.195 Sum_probs=58.5
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEc
Q 005120 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (713)
.+++.|++++|.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 34555555555555544455555555555555555555555555555555555555555555 23333 4555555555
Q ss_pred cccCCCC-CCchhhhcCCCCCEEEccCCccc
Q 005120 162 DQNYISG-SLPKSFANLNKTRHFHMNNNSIS 191 (713)
Q Consensus 162 ~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~ 191 (713)
++|++++ .+|..|+++++|++|++++|.+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~ 128 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLE 128 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCC
T ss_pred cCCccccccchhhhccCCcceEEEecCcccc
Confidence 5555554 24555555555555555555543
No 13
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.4e-33 Score=319.40 Aligned_cols=127 Identities=22% Similarity=0.213 Sum_probs=98.3
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEc
Q 005120 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (713)
.+++.|++++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57888999999888877788888899999999999988888888888899999999999888 45555 7888888999
Q ss_pred cccCCCCC-CchhhhcCCCCCEEEccCCccccccchhcCCCCCc--cEEecccCCC
Q 005120 162 DQNYISGS-LPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSL--VHMLLDNNNL 214 (713)
Q Consensus 162 ~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l 214 (713)
++|++++. +|..|.++++|++|++++|.+.+. .+..+++| ++|++++|++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 88888863 467888888888888888887642 22222333 5555555544
No 14
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.1e-34 Score=311.45 Aligned_cols=322 Identities=18% Similarity=0.173 Sum_probs=209.9
Q ss_pred CCCCCCCCCCCCCCceeec---CCC------CC-----CCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCC
Q 005120 54 LSNWNRGDPCTSNWTGVLC---FNT------TM-----DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKIS 119 (713)
Q Consensus 54 l~~w~~~~~C~~~w~gv~C---~~~------~~-----~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~ 119 (713)
+++|.....|.+.|.+..| +.. .. .-.+.+++.|++.++.++...+..+..+++|++|+|++|.++
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~ 82 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE 82 (390)
T ss_dssp ----CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC
T ss_pred cCCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc
Confidence 5678877666655554444 211 00 112478899999999988665556789999999999999999
Q ss_pred cCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcC
Q 005120 120 GSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELS 199 (713)
Q Consensus 120 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 199 (713)
+..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|+++...+..|.++++|++|++++|.+.+..+..+.
T Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (390)
T 3o6n_A 83 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 162 (390)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS
T ss_pred ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhcc
Confidence 88888999999999999999999998899999999999999999999977667789999999999999999988888899
Q ss_pred CCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccc---------------cCCCCCCEEEccCCCCc
Q 005120 200 RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASY---------------SNMSKLLKLSLRNCSLQ 264 (713)
Q Consensus 200 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~---------------~~l~~L~~L~L~~N~l~ 264 (713)
.+++|++|++++|++++. .+..+++|+.|++++|.+++...+..+ ...++|++|++++|+++
T Consensus 163 ~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~ 239 (390)
T 3o6n_A 163 ATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLT 239 (390)
T ss_dssp SCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCC
T ss_pred CCCCCCEEECCCCcCCcc---ccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCc
Confidence 999999999999999865 245567777777777766532111100 11234555555555554
Q ss_pred cCCCCCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhh
Q 005120 265 GPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 343 (713)
Q Consensus 265 ~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 343 (713)
+. +.+..+++|+.|++++|.+++..|..+.. ++|+.|+|++|++++ +|..+..+++|+.|++++|+++ .+|..+.
T Consensus 240 ~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~- 315 (390)
T 3o6n_A 240 DT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQP- 315 (390)
T ss_dssp CC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHH-
T ss_pred cc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCcccc-
Confidence 32 33444555555555555555433333222 455555555555553 2334445555555555555555 3444443
Q ss_pred hccCCCCCccEEEccCCcCCCcCCCCCCCCceEEEecCCCCCCC
Q 005120 344 SRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLN 387 (713)
Q Consensus 344 ~~~l~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~l~~N~~~~~ 387 (713)
.+++|+.|++++|+++.++ ...+++++.|++++|+|.|+
T Consensus 316 ----~l~~L~~L~L~~N~i~~~~-~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 316 ----QFDRLENLYLDHNSIVTLK-LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp ----HHTTCSEEECCSSCCCCCC-CCTTCCCSEEECCSSCEEHH
T ss_pred ----ccCcCCEEECCCCccceeC-chhhccCCEEEcCCCCccch
Confidence 3345555555555555543 11245555555555555443
No 15
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5.5e-33 Score=320.69 Aligned_cols=316 Identities=18% Similarity=0.248 Sum_probs=241.6
Q ss_pred eeecCCCC---CCCCC-cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCC
Q 005120 69 GVLCFNTT---MDDGY-LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTG 144 (713)
Q Consensus 69 gv~C~~~~---~~~~~-~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 144 (713)
.+.|.... ++.++ ..++.|+|++|++++..+.+|.++++|++|+|++|+|+++.|.+|.++++|++|+|++|++++
T Consensus 35 ~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~ 114 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 114 (635)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred EEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC
Confidence 46786543 34444 479999999999998888899999999999999999998888899999999999999999998
Q ss_pred cCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccc-cchhcCCCCCccEEecccCCCcCCCCcCCC
Q 005120 145 SLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ-IPPELSRLPSLVHMLLDNNNLTGYLPPELS 223 (713)
Q Consensus 145 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 223 (713)
..+..|.++++|++|+|++|++++..+..|+++++|++|++++|.+.+. .|..+..+++|++|++++|++++..+..+.
T Consensus 115 l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 194 (635)
T 4g8a_A 115 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 194 (635)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred CCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccccc
Confidence 8888899999999999999999988888899999999999999999764 577888899999999999887643222111
Q ss_pred --------------------------------------------------------------------------------
Q 005120 224 -------------------------------------------------------------------------------- 223 (713)
Q Consensus 224 -------------------------------------------------------------------------------- 223 (713)
T Consensus 195 ~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~ 274 (635)
T 4g8a_A 195 VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSA 274 (635)
T ss_dssp HHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTT
T ss_pred chhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 005120 224 -------------------------------------------------------------------------------- 223 (713)
Q Consensus 224 -------------------------------------------------------------------------------- 223 (713)
T Consensus 275 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l 354 (635)
T 4g8a_A 275 LEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRL 354 (635)
T ss_dssp TGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEE
T ss_pred cccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhc
Confidence
Q ss_pred --------------CCCCCcEEEcccccCCCC------------------------------------------------
Q 005120 224 --------------ELPKLLILQLDNNNFEGT------------------------------------------------ 241 (713)
Q Consensus 224 --------------~l~~L~~L~L~~N~l~~~------------------------------------------------ 241 (713)
.+++|+.|++++|.+...
T Consensus 355 ~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~ 434 (635)
T 4g8a_A 355 TFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQ 434 (635)
T ss_dssp EEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEES
T ss_pred ccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccc
Confidence 012233333333332100
Q ss_pred -CCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc--cCccEEEccCCcCcccCChhc
Q 005120 242 -TIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNF 317 (713)
Q Consensus 242 -~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~N~l~~~~p~~~ 317 (713)
..+..+..+++++.++++.|.+.+..+ .+..+++|+.|++++|.+...+++..+. ++|++|+|++|+|++.+|..|
T Consensus 435 ~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f 514 (635)
T 4g8a_A 435 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514 (635)
T ss_dssp TTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHH
Confidence 000112333444555555555555544 4566677888888887754433333333 789999999999999999999
Q ss_pred cCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCC-C-C-CCceEEEecCCCCCCCCC
Q 005120 318 SGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-N-I-PPNVTVRLRGNPFCLNTN 389 (713)
Q Consensus 318 ~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~-~-~-~~l~~l~l~~N~~~~~~~ 389 (713)
.++++|++|+|++|+|++..|..+. .+++|++|||++|+|+++++.. . + ++++.|+|++|||.|+|.
T Consensus 515 ~~l~~L~~L~Ls~N~l~~l~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 515 NSLSSLQVLNMSHNNFFSLDTFPYK-----CLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TTCTTCCEEECTTSCCCBCCCGGGT-----TCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred cCCCCCCEEECCCCcCCCCChhHHh-----CCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999999999999999977777776 7789999999999999987643 3 4 578999999999999874
No 16
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.3e-33 Score=328.36 Aligned_cols=283 Identities=24% Similarity=0.310 Sum_probs=247.6
Q ss_pred cCccccCCCCCCEEECCCCCCCc-----------------CCCcccc--CCCCCceEecccCCCCCcCCccCCCCCCCCE
Q 005120 98 LSPEIGRLSYLTILDFMWNKISG-----------------SIPKEIG--NIKSLELLLLNGNELTGSLPEELGYLPKLDR 158 (713)
Q Consensus 98 ~~~~~~~l~~L~~L~Ls~n~i~~-----------------~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 158 (713)
+|+.++++++|++|+|++|++++ .+|..++ ++++|++|+|++|.+.+.+|..|.++++|++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 78889999999999999999998 3899988 9999999999999999999999999999999
Q ss_pred EEccccC-CCC-CCchhhhcCC-------CCCEEEccCCccccccch--hcCCCCCccEEecccCCCcCCCCcCCCCCCC
Q 005120 159 IQIDQNY-ISG-SLPKSFANLN-------KTRHFHMNNNSISGQIPP--ELSRLPSLVHMLLDNNNLTGYLPPELSELPK 227 (713)
Q Consensus 159 L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 227 (713)
|+|++|+ +++ .+|..+.+++ +|++|++++|.++ .+|. .+..+++|++|++++|+++ .+| .++.+++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 9999998 998 8898887766 9999999999999 7888 8999999999999999999 778 8999999
Q ss_pred CcEEEcccccCCCCCCcccccCCCC-CCEEEccCCCCccCCCCCCCCC--CccEEEccCCCCcccCCCCc------cccC
Q 005120 228 LLILQLDNNNFEGTTIPASYSNMSK-LLKLSLRNCSLQGPMPDLSRIP--NLGYLDLSSNQLNGSIPPGR------LSLN 298 (713)
Q Consensus 228 L~~L~L~~N~l~~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~l~~l~--~L~~L~Ls~N~l~~~ip~~~------~~~~ 298 (713)
|+.|++++|+++ .+|..+..+++ |++|+|++|+++..+..+..++ +|+.|++++|++++.+|... ...+
T Consensus 597 L~~L~Ls~N~l~--~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 597 LTDLKLDYNQIE--EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp ESEEECCSSCCS--CCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred ceEEECcCCccc--cchHHHhhccccCCEEECcCCCCCcCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCC
Confidence 999999999998 68889999999 9999999999995544666554 49999999999998776432 1158
Q ss_pred ccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhcc---CCCCCccEEEccCCcCCCcCCCC---CCC
Q 005120 299 ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT---LNATETFILDFQNNNLTNISGSF---NIP 372 (713)
Q Consensus 299 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~---l~~~~L~~L~ls~N~l~~i~~~~---~~~ 372 (713)
|+.|+|++|+++...+..+..+++|+.|+|++|+|+ .+|..++.... -++++|+.|+|++|+|+.++..+ .++
T Consensus 675 L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~ 753 (876)
T 4ecn_A 675 ASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLP 753 (876)
T ss_dssp EEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCT
T ss_pred cCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCccchHHhhhccCC
Confidence 999999999999544444568999999999999999 88887663210 02238999999999999888665 489
Q ss_pred CceEEEecCCCCCC
Q 005120 373 PNVTVRLRGNPFCL 386 (713)
Q Consensus 373 ~l~~l~l~~N~~~~ 386 (713)
+++.|+|++|++.+
T Consensus 754 ~L~~L~Ls~N~L~~ 767 (876)
T 4ecn_A 754 YLSNMDVSYNCFSS 767 (876)
T ss_dssp TCCEEECCSSCCSS
T ss_pred CcCEEEeCCCCCCc
Confidence 99999999999876
No 17
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.3e-33 Score=318.60 Aligned_cols=311 Identities=17% Similarity=0.174 Sum_probs=248.3
Q ss_pred CCceeecCCCC-----CCC-CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEeccc
Q 005120 66 NWTGVLCFNTT-----MDD-GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNG 139 (713)
Q Consensus 66 ~w~gv~C~~~~-----~~~-~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~ 139 (713)
.|.|+ |+... ++. -..+++.|++++|++++..+..|.++++|++|+|++|++++..|.+|+++++|++|+|++
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 68888 75431 222 235899999999999998899999999999999999999998889999999999999999
Q ss_pred CCCCCcCCccCCCCCCCCEEEccccCCCCC-CchhhhcCCCCCEEEccCCccccccc-hhcCCCCCccEEecccCCCcCC
Q 005120 140 NELTGSLPEELGYLPKLDRIQIDQNYISGS-LPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTGY 217 (713)
Q Consensus 140 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~ 217 (713)
|.+++..|..|+++++|++|+|++|.+++. .|..|.++++|++|++++|.+.+.+| ..|..+++|++|++++|++++.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 999988888899999999999999999873 57789999999999999999544454 6899999999999999999999
Q ss_pred CCcCCCCCCCCcEEEcccccCCCCCCccc-ccCCCCCCEEEccCCCCccCC----CCCCC--------------------
Q 005120 218 LPPELSELPKLLILQLDNNNFEGTTIPAS-YSNMSKLLKLSLRNCSLQGPM----PDLSR-------------------- 272 (713)
Q Consensus 218 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~~l~~L~~L~L~~N~l~~~~----~~l~~-------------------- 272 (713)
.|..+..+++|++|++++|.+. .+|.. +..+++|++|++++|++++.. +....
T Consensus 164 ~~~~l~~l~~L~~L~l~~n~~~--~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 241 (549)
T 2z81_A 164 QSQSLKSIRDIHHLTLHLSESA--FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN 241 (549)
T ss_dssp CTTTTTTCSEEEEEEEECSBST--THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH
T ss_pred ChhhhhccccCceEecccCccc--ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH
Confidence 9999988888888888777765 34443 345677777777777776531 00011
Q ss_pred -------------------------------------------------------------------CCCccEEEccCCC
Q 005120 273 -------------------------------------------------------------------IPNLGYLDLSSNQ 285 (713)
Q Consensus 273 -------------------------------------------------------------------l~~L~~L~Ls~N~ 285 (713)
.++|+.|++++|.
T Consensus 242 ~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~ 321 (549)
T 2z81_A 242 ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSK 321 (549)
T ss_dssp HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSC
T ss_pred HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCc
Confidence 1245556666666
Q ss_pred CcccCCCCcc--ccCccEEEccCCcCcccCCh---hccCCcccceeecccccCcccCC--chhhhhccCCCCCccEEEcc
Q 005120 286 LNGSIPPGRL--SLNITTIKLSNNKLTGTIPS---NFSGLPRLQRLFIANNSLSGSIP--SSIWQSRTLNATETFILDFQ 358 (713)
Q Consensus 286 l~~~ip~~~~--~~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p--~~~~~~~~l~~~~L~~L~ls 358 (713)
++ .+|...+ .++|++|++++|++++.+|. .++.+++|+.|++++|++++..+ ..+. .+++|+.||++
T Consensus 322 l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-----~l~~L~~L~Ls 395 (549)
T 2z81_A 322 VF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILL-----TLKNLTSLDIS 395 (549)
T ss_dssp CC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGG-----GCTTCCEEECT
T ss_pred cc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhh-----cCCCCCEEECC
Confidence 55 5665543 27899999999999987654 37788999999999999985432 3344 67889999999
Q ss_pred CCcCCCcCCCCC-CCCceEEEecCCCCC
Q 005120 359 NNNLTNISGSFN-IPPNVTVRLRGNPFC 385 (713)
Q Consensus 359 ~N~l~~i~~~~~-~~~l~~l~l~~N~~~ 385 (713)
+|+++.++..+. +++++.|++++|.+.
T Consensus 396 ~N~l~~lp~~~~~~~~L~~L~Ls~N~l~ 423 (549)
T 2z81_A 396 RNTFHPMPDSCQWPEKMRFLNLSSTGIR 423 (549)
T ss_dssp TCCCCCCCSCCCCCTTCCEEECTTSCCS
T ss_pred CCCCccCChhhcccccccEEECCCCCcc
Confidence 999998887665 788999999999875
No 18
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-33 Score=323.68 Aligned_cols=324 Identities=18% Similarity=0.174 Sum_probs=226.1
Q ss_pred CCCCCCCCCCCCCC---CceeecCCC------CC-----CCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCC
Q 005120 53 KLSNWNRGDPCTSN---WTGVLCFNT------TM-----DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKI 118 (713)
Q Consensus 53 ~l~~w~~~~~C~~~---w~gv~C~~~------~~-----~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i 118 (713)
.+++|.....|... |.++.|+.. .. .-.+.+++.|++.++.+....+..+..+++|++|+|++|.+
T Consensus 8 ~l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l 87 (597)
T 3oja_B 8 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI 87 (597)
T ss_dssp ---CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCC
T ss_pred cccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCC
Confidence 46788877666533 666555421 00 11246788999999998876666788999999999999999
Q ss_pred CcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhc
Q 005120 119 SGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPEL 198 (713)
Q Consensus 119 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 198 (713)
++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..+..|.++++|++|++++|.+++..|..|
T Consensus 88 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 167 (597)
T 3oja_B 88 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167 (597)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred CCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh
Confidence 98888899999999999999999999888899999999999999999997777778999999999999999999888899
Q ss_pred CCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccc---------------cCCCCCCEEEccCCCC
Q 005120 199 SRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASY---------------SNMSKLLKLSLRNCSL 263 (713)
Q Consensus 199 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~---------------~~l~~L~~L~L~~N~l 263 (713)
..+++|++|++++|.+++.. +..+++|+.|++++|.+++...|..+ ...++|+.|+|++|.+
T Consensus 168 ~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l 244 (597)
T 3oja_B 168 QATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNL 244 (597)
T ss_dssp TTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCC
T ss_pred hcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCC
Confidence 99999999999999998653 45567777777777766542111100 0123455555555555
Q ss_pred ccCCCCCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhh
Q 005120 264 QGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (713)
Q Consensus 264 ~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 342 (713)
++. +.+..+++|+.|+|++|.+++.+|..+.. ++|+.|+|++|.+++ +|..+..+++|+.|+|++|+++ .+|..+.
T Consensus 245 ~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~ 321 (597)
T 3oja_B 245 TDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQP 321 (597)
T ss_dssp CCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHH
T ss_pred CCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccc
Confidence 542 34555666666666666666544443322 556666666666664 3444555666666666666666 4555554
Q ss_pred hhccCCCCCccEEEccCCcCCCcCCCCCCCCceEEEecCCCCCCCC
Q 005120 343 QSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNT 388 (713)
Q Consensus 343 ~~~~l~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~l~~N~~~~~~ 388 (713)
.+++|+.|+|++|+|++++ ...++.++.|++++|+|.|++
T Consensus 322 -----~l~~L~~L~L~~N~l~~~~-~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 322 -----QFDRLENLYLDHNSIVTLK-LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp -----HHTTCSEEECCSSCCCCCC-CCTTCCCSEEECCSSCEEHHH
T ss_pred -----cCCCCCEEECCCCCCCCcC-hhhcCCCCEEEeeCCCCCChh
Confidence 3456666666666666553 112556666666666665543
No 19
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.5e-32 Score=322.38 Aligned_cols=160 Identities=19% Similarity=0.195 Sum_probs=107.5
Q ss_pred CcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCC-CccccCCCCCceEecccCCCCCcCCccCCCCCCCCEE
Q 005120 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSI-PKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 159 (713)
..+++.|+|++|.+++..+..|.++++|++|+|++|.+.+.+ |.+|.++++|++|+|++|.+++..|+.|.++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 356777777777777766777777777777777777544444 6667777777777777777777777777777777777
Q ss_pred EccccCCCCCCchh--hhcCCCCCEEEccCCccccccc-hhcCCCCCccEEecccCCCcCCCCcCCCCC--CCCcEEEcc
Q 005120 160 QIDQNYISGSLPKS--FANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTGYLPPELSEL--PKLLILQLD 234 (713)
Q Consensus 160 ~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l--~~L~~L~L~ 234 (713)
+|++|.+++.+|.. |.++++|++|++++|.+.+..+ ..|+.+++|++|++++|.+++..+..+..+ ++|+.|+++
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 77777777655544 6677777777777777766544 456777777777777777766655555544 445555555
Q ss_pred cccCCC
Q 005120 235 NNNFEG 240 (713)
Q Consensus 235 ~N~l~~ 240 (713)
+|.+.+
T Consensus 183 ~n~l~~ 188 (844)
T 3j0a_A 183 ANSLYS 188 (844)
T ss_dssp CSBSCC
T ss_pred CCcccc
Confidence 554443
No 20
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.9e-32 Score=316.68 Aligned_cols=319 Identities=22% Similarity=0.250 Sum_probs=252.2
Q ss_pred CCCCCCceeecCCCC---CCC-CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEec
Q 005120 62 PCTSNWTGVLCFNTT---MDD-GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLL 137 (713)
Q Consensus 62 ~C~~~w~gv~C~~~~---~~~-~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L 137 (713)
+|.+.+..+.|.... ++. -..+++.|++++|++++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 1 ~C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 80 (680)
T 1ziw_A 1 KCTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNL 80 (680)
T ss_dssp ---CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEEC
T ss_pred CceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEEC
Confidence 365567778886543 222 2368999999999999887788999999999999999999999999999999999999
Q ss_pred ccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCC
Q 005120 138 NGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGY 217 (713)
Q Consensus 138 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 217 (713)
++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|++++|.+++..|..+..+++|++|++++|++++.
T Consensus 81 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 81 QHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp CSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccccc
Confidence 99999977777899999999999999999988889999999999999999999999899999999999999999999987
Q ss_pred CCcCCC--CCCCCcEEEcccccCCCCCCcccccCC---------------------------CCCCEEEccCCCCccCCC
Q 005120 218 LPPELS--ELPKLLILQLDNNNFEGTTIPASYSNM---------------------------SKLLKLSLRNCSLQGPMP 268 (713)
Q Consensus 218 ~~~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~~l---------------------------~~L~~L~L~~N~l~~~~~ 268 (713)
.+..+. .+++|+.|++++|++++ ..|..+..+ ++|++|++++|.+++..+
T Consensus 161 ~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~ 239 (680)
T 1ziw_A 161 KSEELDIFANSSLKKLELSSNQIKE-FSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSN 239 (680)
T ss_dssp CHHHHGGGTTCEESEEECTTCCCCC-BCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECT
T ss_pred CHHHhhccccccccEEECCCCcccc-cChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccCh
Confidence 776554 45899999999999987 556666554 456667777777776655
Q ss_pred -CCCCCC--CccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccCCcccceeecccccCccc-----CCc
Q 005120 269 -DLSRIP--NLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGS-----IPS 339 (713)
Q Consensus 269 -~l~~l~--~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----~p~ 339 (713)
.+..++ +|+.|++++|.+++..|..+.. ++|++|++++|++++..|..|..+++|+.|++++|...+. +|.
T Consensus 240 ~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~ 319 (680)
T 1ziw_A 240 TTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPK 319 (680)
T ss_dssp TTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCE
T ss_pred hHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccc
Confidence 455554 3788888888777544443322 6777888888887777777777777888888777665542 232
Q ss_pred ----hhhhhccCCCCCccEEEccCCcCCCcCCC-C-CCCCceEEEecCCCCCC
Q 005120 340 ----SIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCL 386 (713)
Q Consensus 340 ----~~~~~~~l~~~~L~~L~ls~N~l~~i~~~-~-~~~~l~~l~l~~N~~~~ 386 (713)
.+. .+++|+.|++++|+++++++. + .++++++|++++|.+..
T Consensus 320 i~~~~~~-----~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 320 IDDFSFQ-----WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp ECTTTTT-----TCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred cChhhcc-----cCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 333 567888888888888887654 3 37788888888887543
No 21
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=8.6e-34 Score=298.25 Aligned_cols=248 Identities=26% Similarity=0.475 Sum_probs=221.5
Q ss_pred CCCCEEECCCCCCCc--CCCccccCCCCCceEeccc-CCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCE
Q 005120 106 SYLTILDFMWNKISG--SIPKEIGNIKSLELLLLNG-NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (713)
Q Consensus 106 ~~L~~L~Ls~n~i~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 182 (713)
.+++.|+|++|.+.+ .+|..|.++++|++|+|++ |.+.+.+|..|.++++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCC-CCcEEEcccccCCCCCCcccccCCCCCCEEEccCC
Q 005120 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELP-KLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (713)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N 261 (713)
|++++|.+++.+|..+..+++|++|++++|++++.+|..+..++ +|++|++++|++++ .+|..+..++ |++|++++|
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~-~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG-KIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEE-ECCGGGGGCC-CSEEECCSS
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeec-cCChHHhCCc-ccEEECcCC
Confidence 99999999999999999999999999999999999999999998 99999999999987 7888898887 999999999
Q ss_pred CCccCCC-CCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCch
Q 005120 262 SLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSS 340 (713)
Q Consensus 262 ~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 340 (713)
++++..| .+..+++|+.|++++|.+++.+|.....++|++|+|++|++++.+|..|..+++|+.|++++|+++|.+|..
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9998777 688899999999999999877666433478888888888888888888888888888888888888888875
Q ss_pred hhhhccCCCCCccEEEccCCc
Q 005120 341 IWQSRTLNATETFILDFQNNN 361 (713)
Q Consensus 341 ~~~~~~l~~~~L~~L~ls~N~ 361 (713)
. .+++|+.+++++|.
T Consensus 288 -~-----~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 -G-----NLQRFDVSAYANNK 302 (313)
T ss_dssp -T-----TGGGSCGGGTCSSS
T ss_pred -c-----cccccChHHhcCCC
Confidence 3 45556666666654
No 22
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-32 Score=302.95 Aligned_cols=293 Identities=19% Similarity=0.211 Sum_probs=265.4
Q ss_pred eEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEcccc
Q 005120 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (713)
Q Consensus 85 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 164 (713)
+.++..+++++ .+|..+. +++++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 56888888887 4565553 68999999999999988999999999999999999999999999999999999999999
Q ss_pred CCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCc
Q 005120 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIP 244 (713)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 244 (713)
++++..+..|.++++|++|++++|.+.+..+..|..+++|++|++++|.+++..+..|..+++|+.|++++|++++ ..+
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~ 169 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IPT 169 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS-CCH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc-cCh
Confidence 9998877889999999999999999999999999999999999999999999889999999999999999999986 455
Q ss_pred ccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccCCcc
Q 005120 245 ASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPR 322 (713)
Q Consensus 245 ~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~ 322 (713)
..+.++++|+.|++++|.+.+..+ .+..+++|+.|++++|.+.+.+|...+. .+|+.|+|++|++++..+..|..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 679999999999999999998877 7899999999999999988888876555 68999999999999776678999999
Q ss_pred cceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCC-C-CCCCceEEEecCCCCCC
Q 005120 323 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCL 386 (713)
Q Consensus 323 L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~-~-~~~~l~~l~l~~N~~~~ 386 (713)
|+.|+|++|++++..+..+. .+++|+.|++++|+++++.+. + .+++++.|+|++|.+..
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 310 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLH-----ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTT 310 (477)
T ss_dssp CCEEECCSSCCCEECTTSCT-----TCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSC
T ss_pred cCeeECCCCcCCccChhhcc-----ccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCce
Confidence 99999999999977777776 788999999999999998654 3 38999999999998864
No 23
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7.6e-33 Score=306.81 Aligned_cols=283 Identities=18% Similarity=0.203 Sum_probs=239.5
Q ss_pred CCCcceeEEEcCCCCCcccc-CccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCcc--CCCCCC
Q 005120 79 DGYLHLRELQLLNLNLSGNL-SPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEE--LGYLPK 155 (713)
Q Consensus 79 ~~~~~l~~L~l~~~~l~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~ 155 (713)
..+.+|+.|++++|.+.+.+ +..|..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|.. |..+++
T Consensus 51 ~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~ 130 (455)
T 3v47_A 51 SRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTS 130 (455)
T ss_dssp SSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTT
T ss_pred ccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCccc
Confidence 35678999999999987665 457899999999999999999888999999999999999999998755554 889999
Q ss_pred CCEEEccccCCCCCCchh-hhcCCCCCEEEccCCccccccchhcCCC---------------------------------
Q 005120 156 LDRIQIDQNYISGSLPKS-FANLNKTRHFHMNNNSISGQIPPELSRL--------------------------------- 201 (713)
Q Consensus 156 L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l--------------------------------- 201 (713)
|++|+|++|++++..|.. +.++++|++|++++|.+.+..+..+..+
T Consensus 131 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~ 210 (455)
T 3v47_A 131 LEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFK 210 (455)
T ss_dssp CCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTT
T ss_pred CCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccc
Confidence 999999999999887776 8899999999999999988777665443
Q ss_pred -CCccEEecccCCCcCCCCcCCC---------------------------------------CCCCCcEEEcccccCCCC
Q 005120 202 -PSLVHMLLDNNNLTGYLPPELS---------------------------------------ELPKLLILQLDNNNFEGT 241 (713)
Q Consensus 202 -~~L~~L~L~~N~l~~~~~~~l~---------------------------------------~l~~L~~L~L~~N~l~~~ 241 (713)
++|++|++++|++++..|..+. ..++|+.|++++|.+++
T Consensus 211 ~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~- 289 (455)
T 3v47_A 211 NTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFA- 289 (455)
T ss_dssp TCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCE-
T ss_pred cceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccc-
Confidence 6788889988887653332221 12689999999999987
Q ss_pred CCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccC
Q 005120 242 TIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSG 319 (713)
Q Consensus 242 ~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~ 319 (713)
..|..+..+++|++|++++|++++..+ .+..+++|+.|++++|.+++..|..+.. ++|++|+|++|++++..|..|..
T Consensus 290 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 369 (455)
T 3v47_A 290 LLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLG 369 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred cchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccc
Confidence 678889999999999999999999877 7899999999999999998555544333 89999999999999999999999
Q ss_pred CcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCC
Q 005120 320 LPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG 367 (713)
Q Consensus 320 l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~ 367 (713)
+++|++|++++|++++..+..+. .+++|+.|++++|++++-.+
T Consensus 370 l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 370 LPNLKELALDTNQLKSVPDGIFD-----RLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTT-----TCTTCCEEECCSSCBCCCTT
T ss_pred cccccEEECCCCccccCCHhHhc-----cCCcccEEEccCCCcccCCC
Confidence 99999999999999965544555 78899999999999997544
No 24
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-32 Score=308.82 Aligned_cols=159 Identities=20% Similarity=0.239 Sum_probs=95.5
Q ss_pred CCCCCCcEEEcccccCCCCC-CcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccc--cCc
Q 005120 223 SELPKLLILQLDNNNFEGTT-IPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNI 299 (713)
Q Consensus 223 ~~l~~L~~L~L~~N~l~~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L 299 (713)
..+++|++|++++|++++.. .+..+..+++|++|++++|.+++.++.+..+++|+.|++++|.+++..|...+. ++|
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 423 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTC
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCC
Confidence 34567777888888776411 145566677777777777766655545556666666666666666444432222 556
Q ss_pred cEEEccCCcCcccCChhccCCcccceeecccccCc-ccCCchhhhhccCCCCCccEEEccCCcCCCcCC-CCC-CCCceE
Q 005120 300 TTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS-GSIPSSIWQSRTLNATETFILDFQNNNLTNISG-SFN-IPPNVT 376 (713)
Q Consensus 300 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~-~~~-~~~l~~ 376 (713)
++|++++|.+.+..|..|..+++|+.|++++|+++ +.+|..+. .+++|+.|++++|+++++.+ .+. +++++.
T Consensus 424 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~-----~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT-----ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT-----TCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhh-----cccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 66666666666666666666666666666666665 45555554 45566666666666665532 332 555666
Q ss_pred EEecCCCCCC
Q 005120 377 VRLRGNPFCL 386 (713)
Q Consensus 377 l~l~~N~~~~ 386 (713)
|++++|.+.+
T Consensus 499 L~l~~n~l~~ 508 (570)
T 2z63_A 499 LNMASNQLKS 508 (570)
T ss_dssp EECCSSCCSC
T ss_pred EeCCCCcCCC
Confidence 6666665543
No 25
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.3e-31 Score=312.25 Aligned_cols=300 Identities=21% Similarity=0.234 Sum_probs=167.1
Q ss_pred eeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCcccc---------------------------------CCC
Q 005120 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIG---------------------------------NIK 130 (713)
Q Consensus 84 l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~---------------------------------~l~ 130 (713)
++.|++++|.+++..+..++.+++|++|++++|++.+..|..|. .++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~ 329 (680)
T 1ziw_A 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLK 329 (680)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCT
T ss_pred CCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCC
Confidence 66666666666665556666666666666666666655544444 444
Q ss_pred CCceEecccCCCCCcCCccCCCCCCCCEEEcccc----------------------------CCCCCCchhhhcCCCCCE
Q 005120 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN----------------------------YISGSLPKSFANLNKTRH 182 (713)
Q Consensus 131 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N----------------------------~l~~~~p~~~~~l~~L~~ 182 (713)
+|++|++++|.+++..+..|..+++|++|++++| ++++..|..|..+++|++
T Consensus 330 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 409 (680)
T 1ziw_A 330 CLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEV 409 (680)
T ss_dssp TCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCE
Confidence 5555555555555555555555555555444433 233333344444444444
Q ss_pred EEccCCccccccc-hhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCC-CCcccccCCCCCCEEEccC
Q 005120 183 FHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT-TIPASYSNMSKLLKLSLRN 260 (713)
Q Consensus 183 L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~~l~~L~~L~L~~ 260 (713)
|++++|.+.+.+| ..|..+++|++|++++|++++..+..+..+++|+.|++++|.+++. ..|..+..+++|++|++++
T Consensus 410 L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~ 489 (680)
T 1ziw_A 410 LDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 489 (680)
T ss_dssp EECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCS
T ss_pred EeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCC
Confidence 4444444443333 3444445555555555554444444455555555555555554421 3455666666666666666
Q ss_pred CCCccCCC-CCCCCCCccEEEccCCCCcccC----CC---Cccc--cCccEEEccCCcCcccCChhccCCcccceeeccc
Q 005120 261 CSLQGPMP-DLSRIPNLGYLDLSSNQLNGSI----PP---GRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 330 (713)
Q Consensus 261 N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~i----p~---~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 330 (713)
|++++.++ .+..+++|+.|++++|++++.. |. ..+. ++|+.|+|++|+++...+..|.++++|+.|++++
T Consensus 490 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 569 (680)
T 1ziw_A 490 NNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGL 569 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCC
Confidence 66666555 4666666777777776666321 11 0111 5666777777776654445566677777777777
Q ss_pred ccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCC---CCCCceEEEecCCCCCCCC
Q 005120 331 NSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF---NIPPNVTVRLRGNPFCLNT 388 (713)
Q Consensus 331 N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~---~~~~l~~l~l~~N~~~~~~ 388 (713)
|++++..+..+. .+++|+.|++++|+|+++++.. .+++++.+++++|||.|+|
T Consensus 570 N~l~~l~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 570 NNLNTLPASVFN-----NQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp SCCCCCCTTTTT-----TCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred CCCCcCCHhHhC-----CCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 777633333333 4566677777777776665432 2456666777777776665
No 26
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8.4e-32 Score=320.78 Aligned_cols=298 Identities=24% Similarity=0.251 Sum_probs=256.1
Q ss_pred CCCcceeEEEcCCCCCcccc-CccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCcc--CCCCCC
Q 005120 79 DGYLHLRELQLLNLNLSGNL-SPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEE--LGYLPK 155 (713)
Q Consensus 79 ~~~~~l~~L~l~~~~l~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~ 155 (713)
..+.+|+.|++++|+..+.+ |..|.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..|.. |.++++
T Consensus 45 ~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~ 124 (844)
T 3j0a_A 45 PFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKA 124 (844)
T ss_dssp SSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSS
T ss_pred cccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCC
Confidence 45788999999999776666 778999999999999999999999999999999999999999999877665 999999
Q ss_pred CCEEEccccCCCCCCc-hhhhcCCCCCEEEccCCccccccchhcCCC--CCccEEecccCCCcCCCCcCCCCCCC-----
Q 005120 156 LDRIQIDQNYISGSLP-KSFANLNKTRHFHMNNNSISGQIPPELSRL--PSLVHMLLDNNNLTGYLPPELSELPK----- 227 (713)
Q Consensus 156 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~~~~l~~l~~----- 227 (713)
|++|+|++|.+++..+ ..|.++++|++|++++|.+++..+..+..+ ++|+.|++++|.+.+..|..+..+++
T Consensus 125 L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~ 204 (844)
T 3j0a_A 125 LTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNM 204 (844)
T ss_dssp CCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTC
T ss_pred CCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccC
Confidence 9999999999998755 689999999999999999999989888877 89999999999999988888777766
Q ss_pred -CcEEEcccccCCCCCCcccccC--------------------------------------CCCCCEEEccCCCCccCCC
Q 005120 228 -LLILQLDNNNFEGTTIPASYSN--------------------------------------MSKLLKLSLRNCSLQGPMP 268 (713)
Q Consensus 228 -L~~L~L~~N~l~~~~~~~~~~~--------------------------------------l~~L~~L~L~~N~l~~~~~ 268 (713)
|+.|++++|.+++ ..+..+.. .++|++|++++|.+.+..+
T Consensus 205 ~L~~L~Ls~n~l~~-~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~ 283 (844)
T 3j0a_A 205 VLEILDVSGNGWTV-DITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS 283 (844)
T ss_dssp CBSEEBCSSCCSST-TTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS
T ss_pred ceeEEecCCCcCch-hHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccCh
Confidence 9999999998876 44433321 2679999999999988776
Q ss_pred -CCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhcc
Q 005120 269 -DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT 346 (713)
Q Consensus 269 -~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~ 346 (713)
.+..+++|+.|+|++|++++..|..+.. ++|++|+|++|++++..|..|..+++|+.|++++|++++..+..+.
T Consensus 284 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~---- 359 (844)
T 3j0a_A 284 RVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFK---- 359 (844)
T ss_dssp CCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSC----
T ss_pred hhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhc----
Confidence 6888999999999999998665554333 7899999999999988889999999999999999999866666665
Q ss_pred CCCCCccEEEccCCcCCCcCCCCCCCCceEEEecCCCCC
Q 005120 347 LNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (713)
Q Consensus 347 l~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~l~~N~~~ 385 (713)
.+++|+.|++++|.+++++. +++++.+++++|++.
T Consensus 360 -~l~~L~~L~Ls~N~l~~i~~---~~~L~~L~l~~N~l~ 394 (844)
T 3j0a_A 360 -FLEKLQTLDLRDNALTTIHF---IPSIPDIFLSGNKLV 394 (844)
T ss_dssp -SCCCCCEEEEETCCSCCCSS---CCSCSEEEEESCCCC
T ss_pred -CCCCCCEEECCCCCCCcccC---CCCcchhccCCCCcc
Confidence 67899999999999987754 567778888888765
No 27
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-31 Score=306.06 Aligned_cols=300 Identities=19% Similarity=0.193 Sum_probs=202.6
Q ss_pred CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEE
Q 005120 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (713)
Q Consensus 80 ~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 159 (713)
.+.+++.|++++|.+++..+..|+++++|++|+|++|.+++..|..|+++++|++|++++|++++..+..++++++|++|
T Consensus 50 ~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 129 (570)
T 2z63_A 50 SFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 129 (570)
T ss_dssp TCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEE
T ss_pred CCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEE
Confidence 34556666666666665555556666666666666666665555566666666666666666665544456666666666
Q ss_pred EccccCCCC-CCchhhhcCCCCCEEEccCCccccccchhcCCCCCc----cEEecccCCCcCCCC---------------
Q 005120 160 QIDQNYISG-SLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSL----VHMLLDNNNLTGYLP--------------- 219 (713)
Q Consensus 160 ~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L----~~L~L~~N~l~~~~~--------------- 219 (713)
++++|.+++ .+|..|.++++|++|++++|.+++..+..+..+++| +.|++++|.+++..+
T Consensus 130 ~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~ 209 (570)
T 2z63_A 130 NVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRN 209 (570)
T ss_dssp ECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEES
T ss_pred ecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEeccc
Confidence 666666665 346666666667777666666655444444333333 333333333322111
Q ss_pred ------------------------------------------------------------------cCCCCCCCCcEEEc
Q 005120 220 ------------------------------------------------------------------PELSELPKLLILQL 233 (713)
Q Consensus 220 ------------------------------------------------------------------~~l~~l~~L~~L~L 233 (713)
..+..+++|+.|++
T Consensus 210 n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l 289 (570)
T 2z63_A 210 NFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSL 289 (570)
T ss_dssp CCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEE
T ss_pred ccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEe
Confidence 22223344455555
Q ss_pred ccccCCCCCCcccc------------------------------------------cCCCCCCEEEccCCCCccCC--C-
Q 005120 234 DNNNFEGTTIPASY------------------------------------------SNMSKLLKLSLRNCSLQGPM--P- 268 (713)
Q Consensus 234 ~~N~l~~~~~~~~~------------------------------------------~~l~~L~~L~L~~N~l~~~~--~- 268 (713)
++|.++. +|..+ ..+++|++|++++|++++.. +
T Consensus 290 ~~~~l~~--l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 367 (570)
T 2z63_A 290 VSVTIER--VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQ 367 (570)
T ss_dssp ESCEECS--CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEH
T ss_pred cCccchh--hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccccccc
Confidence 4444432 22211 45788999999999998764 3
Q ss_pred CCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCC-hhccCCcccceeecccccCcccCCchhhhhcc
Q 005120 269 DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIP-SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT 346 (713)
Q Consensus 269 ~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~ 346 (713)
.+..+++|+.|++++|.+++. |..+.. ++|+.|++++|.+.+..| ..+..+++|+.|++++|++++..|..+.
T Consensus 368 ~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~---- 442 (570)
T 2z63_A 368 SDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN---- 442 (570)
T ss_dssp HHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTT----
T ss_pred cccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhh----
Confidence 577889999999999999854 433222 799999999999998776 5789999999999999999988888887
Q ss_pred CCCCCccEEEccCCcCCC--cCCCCC-CCCceEEEecCCCCCCC
Q 005120 347 LNATETFILDFQNNNLTN--ISGSFN-IPPNVTVRLRGNPFCLN 387 (713)
Q Consensus 347 l~~~~L~~L~ls~N~l~~--i~~~~~-~~~l~~l~l~~N~~~~~ 387 (713)
.+++|+.|++++|++++ ++..+. +++++.|++++|.+.+.
T Consensus 443 -~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~ 485 (570)
T 2z63_A 443 -GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 485 (570)
T ss_dssp -TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEE
T ss_pred -cCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccC
Confidence 78999999999999983 555554 89999999999998754
No 28
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=7.6e-31 Score=278.05 Aligned_cols=269 Identities=20% Similarity=0.299 Sum_probs=129.3
Q ss_pred CCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEc
Q 005120 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHM 185 (713)
Q Consensus 106 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 185 (713)
++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|+++. +|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCc-cChhhc--ccccEEEC
Confidence 345555555555554444445555555555555555554445555555555555555555542 232222 44555555
Q ss_pred cCCccccccchhcCCCCCccEEecccCCCcC--CCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCC
Q 005120 186 NNNSISGQIPPELSRLPSLVHMLLDNNNLTG--YLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (713)
Q Consensus 186 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 263 (713)
++|.+++..+..+..+++|++|++++|.++. ..+..+..+++|++|++++|.++. +|..+. ++|++|++++|++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~--l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT--IPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS--CCSSCC--TTCSEEECTTSCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc--CCcccc--ccCCEEECCCCcC
Confidence 5555554444445555555555555555532 344445555555555555555542 333222 4555555555555
Q ss_pred ccCCC-CCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchh
Q 005120 264 QGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 341 (713)
Q Consensus 264 ~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 341 (713)
++..+ .+..+++|+.|++++|.+++..+..+.. ++|+.|+|++|+++ .+|..+..+++|++|++++|+|++..+..+
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhc
Confidence 55443 4455555555555555555332222111 45555555555555 445555555566666666666554333333
Q ss_pred hhhcc-CCCCCccEEEccCCcCCC--cC-CCC-CCCCceEEEecCC
Q 005120 342 WQSRT-LNATETFILDFQNNNLTN--IS-GSF-NIPPNVTVRLRGN 382 (713)
Q Consensus 342 ~~~~~-l~~~~L~~L~ls~N~l~~--i~-~~~-~~~~l~~l~l~~N 382 (713)
..... .....++.|++++|.+.. +. ..+ .++.++.++|++|
T Consensus 284 ~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 284 CPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp SCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred CCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 21100 012445556666666543 22 122 2455556666655
No 29
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.98 E-value=1.6e-31 Score=303.37 Aligned_cols=119 Identities=20% Similarity=0.202 Sum_probs=73.6
Q ss_pred CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCC-cCCccCCCCCCCCE
Q 005120 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTG-SLPEELGYLPKLDR 158 (713)
Q Consensus 80 ~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~ 158 (713)
.+.+++.|++++|.+++..+..|+.+++|++|+|++|++++..|..|+++++|++|+|++|.+++ ..|..+.++++|++
T Consensus 48 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 127 (549)
T 2z81_A 48 ACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQT 127 (549)
T ss_dssp SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCE
T ss_pred cCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccE
Confidence 34567777777777766666667777777777777777766555556777777777777776665 24555666666666
Q ss_pred EEccccCCCCCC-chhhhcCCCCCEEEccCCccccccchhc
Q 005120 159 IQIDQNYISGSL-PKSFANLNKTRHFHMNNNSISGQIPPEL 198 (713)
Q Consensus 159 L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~l 198 (713)
|++++|.+.+.+ +..|.++++|++|++++|.+++..|..+
T Consensus 128 L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 168 (549)
T 2z81_A 128 LRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSL 168 (549)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTT
T ss_pred EECCCCccccccCHhhhhcccccCeeeccCCcccccChhhh
Confidence 666666633233 2455555555555555555555444443
No 30
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.98 E-value=1.6e-31 Score=301.38 Aligned_cols=287 Identities=19% Similarity=0.204 Sum_probs=220.1
Q ss_pred eEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEcccc
Q 005120 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (713)
Q Consensus 85 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 164 (713)
+.|++++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|+.|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999999 4777666 89999999999999888889999999999999999999998999999999999999999
Q ss_pred CCCCCCchhhhcCCCCCEEEccCCcccc-ccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCC--cEEEcccccC--C
Q 005120 165 YISGSLPKSFANLNKTRHFHMNNNSISG-QIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKL--LILQLDNNNF--E 239 (713)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L--~~L~L~~N~l--~ 239 (713)
+++ .+|.. .+++|++|++++|.+++ .+|..|+.+++|++|++++|++++ ..+..+++| +.|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 45655 89999999999999987 478899999999999999998864 234444444 5555555554 2
Q ss_pred CCCCcccccCCC--------------------------------------------------------------------
Q 005120 240 GTTIPASYSNMS-------------------------------------------------------------------- 251 (713)
Q Consensus 240 ~~~~~~~~~~l~-------------------------------------------------------------------- 251 (713)
+ ..|..+..+.
T Consensus 154 ~-~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 K-EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp S-CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEE
T ss_pred c-cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhcccccccc
Confidence 2 2222222211
Q ss_pred ---------------CCCEEEccCCCCccCCC-CC---------------------------------------------
Q 005120 252 ---------------KLLKLSLRNCSLQGPMP-DL--------------------------------------------- 270 (713)
Q Consensus 252 ---------------~L~~L~L~~N~l~~~~~-~l--------------------------------------------- 270 (713)
+|++|++++|++++..| .+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n 312 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGT 312 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESS
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCC
Confidence 34444444444443222 11
Q ss_pred --------CCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcc--cCChhccCCcccceeecccccCcccCCc
Q 005120 271 --------SRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTG--TIPSNFSGLPRLQRLFIANNSLSGSIPS 339 (713)
Q Consensus 271 --------~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 339 (713)
..+++|++|++++|++++.+|..+.. ++|++|++++|++++ .+|..+..+++|+.|++++|++++.+|.
T Consensus 313 ~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~ 392 (520)
T 2z7x_B 313 RMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK 392 (520)
T ss_dssp CCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGG
T ss_pred ccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccccc
Confidence 56788999999999998777765443 789999999999987 5567788999999999999999876776
Q ss_pred hhhhhccCCCCCccEEEccCCcCCCcCCCCCCCCceEEEecCCCCC
Q 005120 340 SIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (713)
Q Consensus 340 ~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~l~~N~~~ 385 (713)
.... .+++|+.|++++|++++..+....+.++.|++++|.+.
T Consensus 393 ~~~~----~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 393 GDCS----WTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK 434 (520)
T ss_dssp CSCC----CCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC
T ss_pred chhc----cCccCCEEECcCCCCCcchhhhhcccCCEEECCCCccc
Confidence 5321 56788888888888876433222267888888888876
No 31
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=8.4e-31 Score=298.35 Aligned_cols=289 Identities=17% Similarity=0.204 Sum_probs=221.3
Q ss_pred ceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEcc
Q 005120 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (713)
Q Consensus 83 ~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 162 (713)
..+.++++++++++ +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|+.|.++++|++|+|+
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 34889999999986 676664 899999999999998888899999999999999999999999999999999999999
Q ss_pred ccCCCCCCchhhhcCCCCCEEEccCCccccc-cchhcCCCCCccEEecccCCCcCCCCcCCCCCCCC--cEEEcccccC-
Q 005120 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQ-IPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKL--LILQLDNNNF- 238 (713)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L--~~L~L~~N~l- 238 (713)
+|+++ .+|.. .+++|++|++++|++++. +|..|..+++|++|++++|++++. .+..+++| ++|++++|.+
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 99999 45555 899999999999999874 468999999999999999999863 44555555 8888888877
Q ss_pred -CCCCCcccccCCC------------------------------------------------------------------
Q 005120 239 -EGTTIPASYSNMS------------------------------------------------------------------ 251 (713)
Q Consensus 239 -~~~~~~~~~~~l~------------------------------------------------------------------ 251 (713)
++ ..|..+..+.
T Consensus 183 ~~~-~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 183 IKG-GETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CCS-SSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEE
T ss_pred ccc-cCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcC
Confidence 44 3444443322
Q ss_pred ---------------CCCEEEccCCCCccCCC-CC---------------------------------------------
Q 005120 252 ---------------KLLKLSLRNCSLQGPMP-DL--------------------------------------------- 270 (713)
Q Consensus 252 ---------------~L~~L~L~~N~l~~~~~-~l--------------------------------------------- 270 (713)
+|++|++++|.+++..| .+
T Consensus 262 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n 341 (562)
T 3a79_B 262 TWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDT 341 (562)
T ss_dssp CHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESS
T ss_pred cHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCC
Confidence 56666666666665444 22
Q ss_pred --------CCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCccc--CChhccCCcccceeecccccCcccCCc
Q 005120 271 --------SRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGT--IPSNFSGLPRLQRLFIANNSLSGSIPS 339 (713)
Q Consensus 271 --------~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~ 339 (713)
..+++|++|++++|.+++.+|..+.. ++|+.|++++|++++. +|..|..+++|+.|++++|++++.+|.
T Consensus 342 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 421 (562)
T 3a79_B 342 PFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYD 421 (562)
T ss_dssp CCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSS
T ss_pred CcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccCh
Confidence 56678888888888888766655433 6788888888888863 345678888888888888888876766
Q ss_pred hhhhhccCCCCCccEEEccCCcCCCcCCCCCCCCceEEEecCCCCC
Q 005120 340 SIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (713)
Q Consensus 340 ~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~l~~N~~~ 385 (713)
..+. .+++|+.|++++|++++..+....++++.|++++|.+.
T Consensus 422 ~~~~----~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~ 463 (562)
T 3a79_B 422 RTCA----WAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM 463 (562)
T ss_dssp CCCC----CCTTCCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCC
T ss_pred hhhc----CcccCCEEECCCCCCCcchhhhhcCcCCEEECCCCcCc
Confidence 5332 56777777777777765432211256777777777765
No 32
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1e-30 Score=277.38 Aligned_cols=289 Identities=22% Similarity=0.314 Sum_probs=172.4
Q ss_pred ceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEcc
Q 005120 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (713)
Q Consensus 83 ~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 162 (713)
+++.+++++++++ .+|..+. ++|++|++++|.+.+..|..|.++++|++|+|++|.+++..|..|..+++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3445555555554 3444432 466666666666666556666666666666666666666666666666666666666
Q ss_pred ccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCc--CCCCcCCCCCCCCcEEEcccccCCC
Q 005120 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT--GYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
+|+++. +|..+. ++|++|++++|.+.+..+..|..+++|++|++++|.++ +..+..+..+ +|++|++++|++++
T Consensus 111 ~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 666663 333332 56666666666666555555666666777777666664 2455556655 66777777776663
Q ss_pred CCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhcc
Q 005120 241 TTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFS 318 (713)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~ 318 (713)
+|..+. ++|++|++++|++++..+ .+..+++|+.|++++|++++..+..+.. ++|+.|+|++|+++ .+|..+.
T Consensus 187 --l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 187 --IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp --CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred --cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 444333 566677777777766654 5666677777777777776433322222 56777777777776 5566677
Q ss_pred CCcccceeecccccCcccCCchhhhhc-cCCCCCccEEEccCCcCC--CcCCC-C-CCCCceEEEecCCC
Q 005120 319 GLPRLQRLFIANNSLSGSIPSSIWQSR-TLNATETFILDFQNNNLT--NISGS-F-NIPPNVTVRLRGNP 383 (713)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~~p~~~~~~~-~l~~~~L~~L~ls~N~l~--~i~~~-~-~~~~l~~l~l~~N~ 383 (713)
.+++|+.|++++|++++..+..+.... ......|+.|++++|.++ ++.+. + .++.++.+++++|.
T Consensus 262 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 777777777777777754444443211 011355667777777766 33322 2 25666667776663
No 33
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=6.1e-32 Score=285.94 Aligned_cols=278 Identities=18% Similarity=0.255 Sum_probs=150.3
Q ss_pred CCCHHHHHHHHHHHHhCC-CCCCCCCCCC----C-CCCCCCCCceeecCCCCCCCCCcceeEEEcCCCCCccccCccccC
Q 005120 31 ITDPIEVSALRSIKKSLV-DDYSKLSNWN----R-GDPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGR 104 (713)
Q Consensus 31 ~~~~~~~~~l~~~~~~~~-~~~~~l~~w~----~-~~~C~~~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~ 104 (713)
....+|+.||++||+.+. ++.+.+..|. . .+.| .|.|+.|.... ..+. -..
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~--~~~g~~~~~~~-------------------~~l~--~~~ 79 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE--TRTGRALKATA-------------------DLLE--DAT 79 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC--CSHHHHHHHHH-------------------HHHH--HHT
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc--ccCCcchhhhH-------------------HHHh--ccc
Confidence 344578899999999884 4444456783 2 2455 69999994210 0000 011
Q ss_pred CCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEE
Q 005120 105 LSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFH 184 (713)
Q Consensus 105 l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 184 (713)
..+++.|+|++|.++ .+|..++++++|++|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 234555555555555 44444555555555555555555 45555555555555555555555 4455555555555555
Q ss_pred ccCCccccccchhcC---------CCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCE
Q 005120 185 MNNNSISGQIPPELS---------RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLK 255 (713)
Q Consensus 185 L~~N~l~~~~p~~l~---------~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 255 (713)
+++|++.+.+|..+. .+++|++|++++|+++ .+|..+..+++|++|++++|++++ +|..+..+++|++
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~--l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA--LGPAIHHLPKLEE 233 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC--CCGGGGGCTTCCE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc--CchhhccCCCCCE
Confidence 555555555544433 2444555555555444 344444444455555555554442 3334444444444
Q ss_pred EEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCcccceeecccccCc
Q 005120 256 LSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (713)
Q Consensus 256 L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (713)
|++++|++.+..| .+..++ +|+.|+|++|.+.+.+|..+..+++|+.|+|++|++.
T Consensus 234 L~Ls~n~~~~~~p~~~~~l~-----------------------~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 234 LDLRGCTALRNYPPIFGGRA-----------------------PLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp EECTTCTTCCBCCCCTTCCC-----------------------CCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred EECcCCcchhhhHHHhcCCC-----------------------CCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 4444444444333 334444 4555555555555555556666666666666666666
Q ss_pred ccCCchhhhhccCCCCCccEEEccCCcCCCc
Q 005120 335 GSIPSSIWQSRTLNATETFILDFQNNNLTNI 365 (713)
Q Consensus 335 ~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i 365 (713)
+.+|+.+. .+++|+.+++..|.+..+
T Consensus 291 ~~iP~~l~-----~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 291 SRLPSLIA-----QLPANCIILVPPHLQAQL 316 (328)
T ss_dssp CCCCGGGG-----GSCTTCEEECCGGGSCC-
T ss_pred hhccHHHh-----hccCceEEeCCHHHHHHH
Confidence 66666666 556666666666666544
No 34
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=3.1e-30 Score=275.24 Aligned_cols=283 Identities=22% Similarity=0.319 Sum_probs=218.5
Q ss_pred CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEE
Q 005120 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (713)
Q Consensus 80 ~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 159 (713)
.+++++.|++++|.+++.. . +..+++|++|++++|.++. + ..|..+++|++|++++|.+++..+ +..+++|++|
T Consensus 64 ~~~~L~~L~l~~n~i~~~~-~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L 137 (347)
T 4fmz_A 64 YLTNLEYLNLNGNQITDIS-P-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELYLNEDNISDISP--LANLTKMYSL 137 (347)
T ss_dssp GCTTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEE
T ss_pred hcCCccEEEccCCccccch-h-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEECcCCcccCchh--hccCCceeEE
Confidence 3567888888888887543 3 8888888888888888875 3 358888888888888888875433 7788888888
Q ss_pred EccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCC
Q 005120 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (713)
Q Consensus 160 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 239 (713)
++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.++
T Consensus 138 ~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 212 (347)
T 4fmz_A 138 NLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQIT 212 (347)
T ss_dssp ECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCC
Confidence 888886654444 37888888888888888875544 7788888888888888875433 778888888888888887
Q ss_pred CCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccC
Q 005120 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSG 319 (713)
Q Consensus 240 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 319 (713)
+ .+. +..+++|++|++++|++++..+ +..+++|+.|++++|.+++ ++.....++|+.|++++|++++. ..+..
T Consensus 213 ~--~~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~~--~~~~~ 285 (347)
T 4fmz_A 213 D--ITP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISD-INAVKDLTKLKMLNVGSNQISDI--SVLNN 285 (347)
T ss_dssp C--CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-CGGGTTCTTCCEEECCSSCCCCC--GGGGG
T ss_pred C--Cch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCC-ChhHhcCCCcCEEEccCCccCCC--hhhcC
Confidence 5 232 7788888889998888887655 7788888999999888874 44332337888999999988865 45788
Q ss_pred CcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCCCCCCceEEEecCCCCC
Q 005120 320 LPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (713)
Q Consensus 320 l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~l~~N~~~ 385 (713)
+++|+.|++++|++++..|..+. .+++|+.|++++|+++++++...+++++.|++++|++.
T Consensus 286 l~~L~~L~L~~n~l~~~~~~~l~-----~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 286 LSQLNSLFLNNNQLGNEDMEVIG-----GLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVIK 346 (347)
T ss_dssp CTTCSEEECCSSCCCGGGHHHHH-----TCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC---
T ss_pred CCCCCEEECcCCcCCCcChhHhh-----ccccCCEEEccCCccccccChhhhhccceeehhhhccc
Confidence 88899999999988887777777 67888889999998888877444788888888888763
No 35
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=7.6e-30 Score=270.35 Aligned_cols=288 Identities=23% Similarity=0.293 Sum_probs=244.1
Q ss_pred CCCCCCCceeecCCCCC---CC-CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEe
Q 005120 61 DPCTSNWTGVLCFNTTM---DD-GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLL 136 (713)
Q Consensus 61 ~~C~~~w~gv~C~~~~~---~~-~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~ 136 (713)
..|.|.|..+.|.+..+ +. -.+.++.|++++|++++..+..|+++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 27 ~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 27 FRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp TTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 35666899999975432 22 235799999999999988777899999999999999999988899999999999999
Q ss_pred cccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCcccc--ccchhcCCCCCccEEecccCCC
Q 005120 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG--QIPPELSRLPSLVHMLLDNNNL 214 (713)
Q Consensus 137 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l 214 (713)
|++|+++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.+.. ..+..+..+++|++|++++|++
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999998 5565554 799999999999998888899999999999999999964 6778899999999999999999
Q ss_pred cCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCC
Q 005120 215 TGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPG 293 (713)
Q Consensus 215 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~ 293 (713)
+. +|..+. ++|++|++++|++++ ..+..+..+++|++|++++|++++..+ .+..+++|+.|++++|+++ .+|..
T Consensus 184 ~~-l~~~~~--~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 258 (330)
T 1xku_A 184 TT-IPQGLP--PSLTELHLDGNKITK-VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGG 258 (330)
T ss_dssp CS-CCSSCC--TTCSEEECTTSCCCE-ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTT
T ss_pred cc-CCcccc--ccCCEEECCCCcCCc-cCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChh
Confidence 85 555544 899999999999986 567889999999999999999998877 7888999999999999999 78776
Q ss_pred ccc-cCccEEEccCCcCcccCChhccCC------cccceeecccccCcc--cCCchhhhhccCCCCCccEEEccCCc
Q 005120 294 RLS-LNITTIKLSNNKLTGTIPSNFSGL------PRLQRLFIANNSLSG--SIPSSIWQSRTLNATETFILDFQNNN 361 (713)
Q Consensus 294 ~~~-~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~~--~~p~~~~~~~~l~~~~L~~L~ls~N~ 361 (713)
... ++|++|++++|+|++..+..|... +.|+.|++++|++.. ..|..+. .+..++.+++++|+
T Consensus 259 l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~-----~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 259 LADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR-----CVYVRAAVQLGNYK 330 (330)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGT-----TCCCGGGEEC----
T ss_pred hccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccc-----cccceeEEEecccC
Confidence 544 789999999999998888777643 789999999999874 3344454 67889999999985
No 36
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=5.9e-30 Score=294.15 Aligned_cols=320 Identities=20% Similarity=0.191 Sum_probs=247.8
Q ss_pred CCCCCC--CceeecCCCCC---CC-CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCce
Q 005120 61 DPCTSN--WTGVLCFNTTM---DD-GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLEL 134 (713)
Q Consensus 61 ~~C~~~--w~gv~C~~~~~---~~-~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~ 134 (713)
+||.+. -..+.|....+ +. -..+++.|++++|.+++..+..|.++++|++|+|++|++++..|.+|.++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 456432 23577865432 22 3467999999999999988889999999999999999999988999999999999
Q ss_pred EecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCcccc-ccchhcCCCCCccEEecccCC
Q 005120 135 LLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG-QIPPELSRLPSLVHMLLDNNN 213 (713)
Q Consensus 135 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~ 213 (713)
|+|++|.+++..|+.|.++++|++|+|++|.+++..+..|.++++|++|++++|.+.+ .+|..++.+++|++|++++|+
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 9999999999999999999999999999999998888899999999999999999986 569999999999999999999
Q ss_pred CcCCCCcCCCCCC---------------------------CCcEEEcccccCC---------------------------
Q 005120 214 LTGYLPPELSELP---------------------------KLLILQLDNNNFE--------------------------- 239 (713)
Q Consensus 214 l~~~~~~~l~~l~---------------------------~L~~L~L~~N~l~--------------------------- 239 (713)
+++..+..++.++ +|+.|++++|.++
T Consensus 165 l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~ 244 (606)
T 3vq2_A 165 IQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDE 244 (606)
T ss_dssp CCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTS
T ss_pred ceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccC
Confidence 8876555443322 2223333322221
Q ss_pred ---------------------------------------------------------------------------CCCCc
Q 005120 240 ---------------------------------------------------------------------------GTTIP 244 (713)
Q Consensus 240 ---------------------------------------------------------------------------~~~~~ 244 (713)
+ .+|
T Consensus 245 ~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~-~lp 323 (606)
T 3vq2_A 245 RNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLK-QFP 323 (606)
T ss_dssp CCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCS-SCC
T ss_pred CcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCc-ccc
Confidence 0 111
Q ss_pred c--------------------cccCCCCCCEEEccCCCCccCC--C-CCCCCCCccEEEccCCCCcccCCCCccc-cCcc
Q 005120 245 A--------------------SYSNMSKLLKLSLRNCSLQGPM--P-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNIT 300 (713)
Q Consensus 245 ~--------------------~~~~l~~L~~L~L~~N~l~~~~--~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~ 300 (713)
. .+..+++|++|++++|++++.. + .+..+++|+.|++++|.++ .+|..+.. ++|+
T Consensus 324 ~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~ 402 (606)
T 3vq2_A 324 TLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQ 402 (606)
T ss_dssp CCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCC
T ss_pred cCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCC
Confidence 0 1223455555566666655442 2 4566788899999999888 45543333 7899
Q ss_pred EEEccCCcCcccCC-hhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCC--cCCCCC-CCCceE
Q 005120 301 TIKLSNNKLTGTIP-SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN--ISGSFN-IPPNVT 376 (713)
Q Consensus 301 ~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~--i~~~~~-~~~l~~ 376 (713)
.|++++|++.+..| ..+..+++|+.|++++|++++..|..+. .+++|+.|++++|++++ ++..+. +++++.
T Consensus 403 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 477 (606)
T 3vq2_A 403 HLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFL-----GLTSLNTLKMAGNSFKDNTLSNVFANTTNLTF 477 (606)
T ss_dssp EEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTT-----TCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred eeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhc-----CCCCCCEEECCCCcCCCcchHHhhccCCCCCE
Confidence 99999999988877 6788899999999999999888888777 67888899999999887 344444 788888
Q ss_pred EEecCCCCCCC
Q 005120 377 VRLRGNPFCLN 387 (713)
Q Consensus 377 l~l~~N~~~~~ 387 (713)
|++++|.+.+.
T Consensus 478 L~Ls~n~l~~~ 488 (606)
T 3vq2_A 478 LDLSKCQLEQI 488 (606)
T ss_dssp EECTTSCCCEE
T ss_pred EECCCCcCCcc
Confidence 99999887643
No 37
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=6.7e-30 Score=270.99 Aligned_cols=287 Identities=24% Similarity=0.320 Sum_probs=240.3
Q ss_pred CCCCCCCceeecCCCCC---CC-CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEe
Q 005120 61 DPCTSNWTGVLCFNTTM---DD-GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLL 136 (713)
Q Consensus 61 ~~C~~~w~gv~C~~~~~---~~-~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~ 136 (713)
..|.|.|..+.|....+ +. -..+++.|++++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 29 ~~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 29 FGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp SSCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred CCCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 34656899999975432 21 235799999999999988888999999999999999999988899999999999999
Q ss_pred cccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccc--cccchhcCCCCCccEEecccCCC
Q 005120 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSIS--GQIPPELSRLPSLVHMLLDNNNL 214 (713)
Q Consensus 137 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L~~N~l 214 (713)
|++|+++ .+|..+. ++|++|++++|++.+..+..|.++++|++|++++|.++ +..+..+..+ +|++|++++|++
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 9999998 5555554 89999999999999888888999999999999999996 3667788888 999999999999
Q ss_pred cCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCC
Q 005120 215 TGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPG 293 (713)
Q Consensus 215 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~ 293 (713)
++ +|..+. ++|++|++++|.+++ ..+..+..+++|++|++++|++++..+ .+..+++|+.|++++|+++ .+|..
T Consensus 185 ~~-l~~~~~--~~L~~L~l~~n~i~~-~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 259 (332)
T 2ft3_A 185 TG-IPKDLP--ETLNELHLDHNKIQA-IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAG 259 (332)
T ss_dssp SS-CCSSSC--SSCSCCBCCSSCCCC-CCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTT
T ss_pred Cc-cCcccc--CCCCEEECCCCcCCc-cCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChh
Confidence 85 565554 799999999999986 566789999999999999999998877 6888999999999999999 78876
Q ss_pred ccc-cCccEEEccCCcCcccCChhccCC------cccceeecccccCc--ccCCchhhhhccCCCCCccEEEccCCc
Q 005120 294 RLS-LNITTIKLSNNKLTGTIPSNFSGL------PRLQRLFIANNSLS--GSIPSSIWQSRTLNATETFILDFQNNN 361 (713)
Q Consensus 294 ~~~-~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~--~~~p~~~~~~~~l~~~~L~~L~ls~N~ 361 (713)
+.. ++|+.|++++|+|++..+..|... ++|+.|++++|++. +..|..+. .+++|+.+++++|+
T Consensus 260 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~-----~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 260 LPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFR-----CVTDRLAIQFGNYK 331 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGT-----TBCCSTTEEC----
T ss_pred hhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCccccc-----ccchhhhhhccccc
Confidence 444 789999999999998877777653 67999999999987 45555555 67889999999885
No 38
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=1.3e-29 Score=275.01 Aligned_cols=266 Identities=20% Similarity=0.210 Sum_probs=230.4
Q ss_pred cCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCE
Q 005120 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (713)
Q Consensus 103 ~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 182 (713)
-.++++++|++++|.+....+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 35689999999999998665566899999999999999999888889999999999999999999999999999999999
Q ss_pred EEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCC
Q 005120 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCS 262 (713)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 262 (713)
|++++|.++...+..|..+++|++|++++|++++..+..+..+++|++|++++|++++. .+..+++|++|++++|.
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV----DLSLIPSLFHANVSYNL 197 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC----CGGGCTTCSEEECCSSC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc----ccccccccceeeccccc
Confidence 99999999976666679999999999999999988888899999999999999999862 35678999999999998
Q ss_pred CccCCCCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhh
Q 005120 263 LQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (713)
Q Consensus 263 l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 342 (713)
+++. ...++|+.|++++|.++ .+|.. ...+|+.|++++|.+++. ..+..+++|+.|++++|++++..|..+.
T Consensus 198 l~~~----~~~~~L~~L~l~~n~l~-~~~~~-~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 198 LSTL----AIPIAVEELDASHNSIN-VVRGP-VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp CSEE----ECCSSCSEEECCSSCCC-EEECC-CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred cccc----CCCCcceEEECCCCeee-ecccc-ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 8753 23457899999999988 44443 346899999999999864 5788889999999999999888888877
Q ss_pred hhccCCCCCccEEEccCCcCCCcCCCCC-CCCceEEEecCCCCC
Q 005120 343 QSRTLNATETFILDFQNNNLTNISGSFN-IPPNVTVRLRGNPFC 385 (713)
Q Consensus 343 ~~~~l~~~~L~~L~ls~N~l~~i~~~~~-~~~l~~l~l~~N~~~ 385 (713)
.+++|+.|++++|++++++.... +++++.|++++|++.
T Consensus 270 -----~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 270 -----KMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL 308 (390)
T ss_dssp -----TCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC
T ss_pred -----ccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce
Confidence 67889999999999988876554 788889999999876
No 39
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=4.4e-29 Score=277.38 Aligned_cols=281 Identities=25% Similarity=0.322 Sum_probs=212.2
Q ss_pred CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEE
Q 005120 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (713)
Q Consensus 80 ~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 159 (713)
.+.+++.|++++|.+++..+ +.++++|++|++++|.+.+..+ +.++++|++|++++|.+++..+ +.++++|++|
T Consensus 66 ~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 139 (466)
T 1o6v_A 66 YLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRL 139 (466)
T ss_dssp GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEE
T ss_pred hhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEE
Confidence 35788999999999886543 8899999999999999986554 8899999999999999886543 8889999999
Q ss_pred EccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCC
Q 005120 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (713)
Q Consensus 160 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 239 (713)
++++|.+.+. + .+..+++|++|+++ |.+.+.. .+..+++|++|++++|.+++. ..+..+++|++|++++|.++
T Consensus 140 ~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~ 212 (466)
T 1o6v_A 140 ELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQIS 212 (466)
T ss_dssp EEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred ECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccc
Confidence 9999988853 3 47778888888875 4444332 377888888888888888753 34777888888888888887
Q ss_pred CCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccC
Q 005120 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSG 319 (713)
Q Consensus 240 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 319 (713)
+ ..+ ++.+++|++|++++|++++. +.+..+++|+.|++++|.+++..+ ....++|+.|++++|++++..+ +..
T Consensus 213 ~-~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~ 285 (466)
T 1o6v_A 213 D-ITP--LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAG 285 (466)
T ss_dssp C-CGG--GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTT
T ss_pred c-ccc--ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccC
Confidence 5 323 66788888888888888754 456677888888888888875443 2223678888888888886544 777
Q ss_pred CcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCCCCCCceEEEecCCCCCCC
Q 005120 320 LPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLN 387 (713)
Q Consensus 320 l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~l~~N~~~~~ 387 (713)
+++|+.|++++|++++..| +. .+++|+.|++++|+++++++...+++++.|++++|++.+.
T Consensus 286 l~~L~~L~L~~n~l~~~~~--~~-----~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 286 LTALTNLELNENQLEDISP--IS-----NLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CTTCSEEECCSSCCSCCGG--GG-----GCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred CCccCeEEcCCCcccCchh--hc-----CCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 8888888888888875433 33 5677888888888888776633477788888888877653
No 40
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=4.7e-30 Score=274.61 Aligned_cols=270 Identities=17% Similarity=0.206 Sum_probs=170.6
Q ss_pred CCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCC
Q 005120 90 LNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGS 169 (713)
Q Consensus 90 ~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 169 (713)
++++++ .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++.
T Consensus 39 ~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 115 (353)
T 2z80_A 39 SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNL 115 (353)
T ss_dssp CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSC
T ss_pred CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcC
Confidence 344554 3454443 4788888888888866666788888888888888888877777788888888888888888766
Q ss_pred CchhhhcCCCCCEEEccCCccccccc-hhcCCCCCccEEecccC-CCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccc
Q 005120 170 LPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNN-NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASY 247 (713)
Q Consensus 170 ~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N-~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 247 (713)
.+..|.++++|++|++++|++++..+ ..+..+++|++|++++| .++...+..+..+++|++|++++|++++ ..|..+
T Consensus 116 ~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~l 194 (353)
T 2z80_A 116 SSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS-YEPKSL 194 (353)
T ss_dssp CHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE-ECTTTT
T ss_pred CHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCc-cCHHHH
Confidence 66667788888888888888775443 36777777888887777 3665556667777777777777777765 456667
Q ss_pred cCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCc----cccCccEEEccCCcCcccCChhccCCcc
Q 005120 248 SNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGR----LSLNITTIKLSNNKLTGTIPSNFSGLPR 322 (713)
Q Consensus 248 ~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~----~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 322 (713)
..+++|++|++++|+++..+. .+..+++|+.|++++|.+++..+... ....++.++|++|.+++.
T Consensus 195 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~---------- 264 (353)
T 2z80_A 195 KSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE---------- 264 (353)
T ss_dssp TTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH----------
T ss_pred hccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc----------
Confidence 777777777777776654333 23345666666666666664322211 012344444444444331
Q ss_pred cceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCC--CCCCceEEEecCCCCCCCC
Q 005120 323 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNT 388 (713)
Q Consensus 323 L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~--~~~~l~~l~l~~N~~~~~~ 388 (713)
.+. .+|..+. .+++|+.||+++|+++.++... .++++++|++++|++.|++
T Consensus 265 ---------~l~-~l~~~l~-----~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 265 ---------SLF-QVMKLLN-----QISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp ---------HHH-HHHHHHH-----TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ---------chh-hhHHHHh-----cccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 010 2344443 4455555555555555555432 2556666666666666655
No 41
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=6.3e-29 Score=276.16 Aligned_cols=283 Identities=25% Similarity=0.352 Sum_probs=206.4
Q ss_pred CCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCE
Q 005120 79 DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDR 158 (713)
Q Consensus 79 ~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 158 (713)
..+.+++.|++++|.+.+..+ ++++++|++|++++|.+++..+ +.++++|++|++++|.+++. + .+..+++|++
T Consensus 87 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~ 160 (466)
T 1o6v_A 87 KNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQ 160 (466)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSE
T ss_pred hccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccE
Confidence 356789999999999987654 9999999999999999996543 89999999999999999864 3 4777888888
Q ss_pred EEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccC
Q 005120 159 IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNF 238 (713)
Q Consensus 159 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 238 (713)
|+++ |.+.+..+ +.++++|++|++++|.+.+. ..+..+++|++|++++|.+++..+ ++.+++|+.|++++|++
T Consensus 161 L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 233 (466)
T 1o6v_A 161 LSFG-NQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL 233 (466)
T ss_dssp EEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred eecC-CcccCchh--hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCc
Confidence 8875 45554332 77778888888888877654 246777788888888887776544 66677788888888777
Q ss_pred CCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhcc
Q 005120 239 EGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFS 318 (713)
Q Consensus 239 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 318 (713)
++ + ..+..+++|++|++++|.+++..+ +..+++|+.|++++|.+++ ++.....++|+.|++++|++++..+ +.
T Consensus 234 ~~--~-~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~L~~n~l~~~~~--~~ 306 (466)
T 1o6v_A 234 KD--I-GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISN-ISPLAGLTALTNLELNENQLEDISP--IS 306 (466)
T ss_dssp CC--C-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCC-CGGGTTCTTCSEEECCSSCCSCCGG--GG
T ss_pred cc--c-hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCc-cccccCCCccCeEEcCCCcccCchh--hc
Confidence 64 2 356777778888888777776555 6677777777777777774 3332223677777777777776544 66
Q ss_pred CCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCCCCCCceEEEecCCCCCCCC
Q 005120 319 GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNT 388 (713)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~l~~N~~~~~~ 388 (713)
.+++|+.|++++|++++..| +. .+++|+.|++++|++++++....+++++.|++++|++.+..
T Consensus 307 ~l~~L~~L~L~~n~l~~~~~--~~-----~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~ 369 (466)
T 1o6v_A 307 NLKNLTYLTLYFNNISDISP--VS-----SLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLT 369 (466)
T ss_dssp GCTTCSEEECCSSCCSCCGG--GG-----GCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCG
T ss_pred CCCCCCEEECcCCcCCCchh--hc-----cCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccCccc
Confidence 77777777777777776554 33 55777777777777777643334677777777777775543
No 42
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=2.6e-28 Score=269.65 Aligned_cols=277 Identities=18% Similarity=0.161 Sum_probs=132.0
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEc
Q 005120 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (713)
.+++.|++++|.+++. + ++.+++|++|++++|++++. | ++++++|++|++++|++++. | +..+++|++|++
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEEC
Confidence 3444555555544442 1 44444555555555554432 1 44445555555555554432 2 444455555555
Q ss_pred cccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCC
Q 005120 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (713)
Q Consensus 162 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 241 (713)
++|++++. + +.++++|++|++++|...+.+ .+..+++|++|++++|++++ +| +..+++|+.|++++|++++.
T Consensus 135 ~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~ 206 (457)
T 3bz5_A 135 ARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL 206 (457)
T ss_dssp TTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee
Confidence 55554442 1 444445555555555333332 24445555555555555553 22 44455555555555555431
Q ss_pred CCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccc---------cCccEEEccCCcCccc
Q 005120 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS---------LNITTIKLSNNKLTGT 312 (713)
Q Consensus 242 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~---------~~L~~L~Ls~N~l~~~ 312 (713)
.+..+++|++|++++|++++. | +..+++|+.|++++|++++. |...+. .+|+.|++++|.+.+.
T Consensus 207 ----~l~~l~~L~~L~Ls~N~l~~i-p-~~~l~~L~~L~l~~N~l~~~-~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~ 279 (457)
T 3bz5_A 207 ----DLNQNIQLTFLDCSSNKLTEI-D-VTPLTQLTYFDCSVNPLTEL-DVSTLSKLTTLHCIQTDLLEIDLTHNTQLIY 279 (457)
T ss_dssp ----CCTTCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSCC-CCTTCTTCCEEECTTCCCSCCCCTTCTTCCE
T ss_pred ----ccccCCCCCEEECcCCccccc-C-ccccCCCCEEEeeCCcCCCc-CHHHCCCCCEEeccCCCCCEEECCCCccCCc
Confidence 244555555555555555542 2 44555555555555555532 221111 1233444444444433
Q ss_pred CChhccCCcccceeecccccCcccCCchhhhhccC---CCCCccEEEccCCcCCCcCCCCCCCCceEEEecCCCCC
Q 005120 313 IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL---NATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (713)
Q Consensus 313 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l---~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~l~~N~~~ 385 (713)
+| ++.+++|+.|++++|++.+.+|.....+..+ ..++|+.|++++|+|++++ -..++.++.|++++|++.
T Consensus 280 ~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l~-l~~l~~L~~L~l~~N~l~ 352 (457)
T 3bz5_A 280 FQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTELD-VSHNTKLKSLSCVNAHIQ 352 (457)
T ss_dssp EE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCCC-CTTCTTCSEEECCSSCCC
T ss_pred cc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccccc-cccCCcCcEEECCCCCCC
Confidence 33 3445566666666665555555432222211 2345666666666666652 122556666666666654
No 43
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=9.9e-30 Score=266.43 Aligned_cols=250 Identities=17% Similarity=0.222 Sum_probs=120.0
Q ss_pred CCCCCCCceeecCCCCC---CC-CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcC--CCccccCCCCCce
Q 005120 61 DPCTSNWTGVLCFNTTM---DD-GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGS--IPKEIGNIKSLEL 134 (713)
Q Consensus 61 ~~C~~~w~gv~C~~~~~---~~-~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~--~p~~~~~l~~L~~ 134 (713)
+.|.|.|.++.|....+ +. -..+++.|++++|+++...+..|.++++|++|+|++|.++.. .|..+..+++|++
T Consensus 3 ~~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 46777899999965432 11 113455555555555432222344555555555555554421 1334444455555
Q ss_pred EecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCc-hhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCC
Q 005120 135 LLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLP-KSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNN 213 (713)
Q Consensus 135 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 213 (713)
|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..+..+..+++|++|++++|.
T Consensus 83 L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 83 LDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp EECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred EECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 555555544 233334444555555555554443332 344444445555555554444444444444444444444444
Q ss_pred CcC-CCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCC
Q 005120 214 LTG-YLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIP 291 (713)
Q Consensus 214 l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip 291 (713)
+++ ..|..+..+++|++|++++|++++ ..|..+..+++|++|++++|++++..+ .+..++
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~----------------- 223 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQLEQ-LSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN----------------- 223 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCT-----------------
T ss_pred cccccchhHHhhCcCCCEEECCCCCcCC-cCHHHhcCCCCCCEEECCCCccCccChhhccCcc-----------------
Confidence 443 234444444444444444444443 233444444444444444444444333 334444
Q ss_pred CCccccCccEEEccCCcCcccCChhccCCc-ccceeecccccCcc
Q 005120 292 PGRLSLNITTIKLSNNKLTGTIPSNFSGLP-RLQRLFIANNSLSG 335 (713)
Q Consensus 292 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 335 (713)
+|+.|++++|++++..|..+..++ +|+.|++++|++++
T Consensus 224 ------~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 224 ------SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp ------TCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred ------cCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 455555555555555555555542 55555555555543
No 44
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=2e-28 Score=261.27 Aligned_cols=282 Identities=20% Similarity=0.291 Sum_probs=241.0
Q ss_pred CcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEE
Q 005120 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (713)
+.+++.|++.++.+... + .+..+++|++|++++|++++. +. +..+++|++|++++|.++.. +.+..+++|++|+
T Consensus 43 l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~ 116 (347)
T 4fmz_A 43 LESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELY 116 (347)
T ss_dssp HTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEE
T ss_pred cccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEE
Confidence 56899999999999753 3 588999999999999999964 44 99999999999999999864 4699999999999
Q ss_pred ccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
+++|.+.+..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++
T Consensus 117 l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 99999996544 8999999999999997665544 48999999999999999986543 8899999999999999985
Q ss_pred CCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCC
Q 005120 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGL 320 (713)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l 320 (713)
++. +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++ ++.....++|++|++++|.+++. ..+..+
T Consensus 192 --~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l 264 (347)
T 4fmz_A 192 --ISP-LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITD-LSPLANLSQLTWLEIGTNQISDI--NAVKDL 264 (347)
T ss_dssp --CGG-GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGGGTTCTTCCEEECCSSCCCCC--GGGTTC
T ss_pred --ccc-ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCC-CcchhcCCCCCEEECCCCccCCC--hhHhcC
Confidence 444 8899999999999999997665 7888999999999999984 44432338999999999999974 578999
Q ss_pred cccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCC-C-CCCCceEEEecCCCCCCC
Q 005120 321 PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLN 387 (713)
Q Consensus 321 ~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~-~-~~~~l~~l~l~~N~~~~~ 387 (713)
++|+.|++++|++++. +.+. .+++|+.|++++|++++..+. + .+++++.|++++|++.+.
T Consensus 265 ~~L~~L~l~~n~l~~~--~~~~-----~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 265 TKLKMLNVGSNQISDI--SVLN-----NLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp TTCCEEECCSSCCCCC--GGGG-----GCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred CCcCEEEccCCccCCC--hhhc-----CCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 9999999999999853 3444 678999999999999987643 3 388999999999998644
No 45
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=4.6e-29 Score=285.80 Aligned_cols=265 Identities=20% Similarity=0.216 Sum_probs=230.8
Q ss_pred CCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEE
Q 005120 104 RLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (713)
Q Consensus 104 ~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 183 (713)
.+.+++.|++++|.+....+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46889999999999997777778999999999999999999989999999999999999999999999999999999999
Q ss_pred EccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCC
Q 005120 184 HMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (713)
Q Consensus 184 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 263 (713)
+|++|.+++..+..|..+++|++|++++|.+++..|..+..+++|++|++++|.+++. .+..+++|+.|++++|.+
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV----DLSLIPSLFHANVSYNLL 204 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC----CGGGCTTCSEEECCSSCC
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc----ChhhhhhhhhhhcccCcc
Confidence 9999999977777789999999999999999999999999999999999999999862 256688999999999988
Q ss_pred ccCCCCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhh
Q 005120 264 QGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 343 (713)
Q Consensus 264 ~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 343 (713)
++. ...++|+.|++++|.++ .++.. ...+|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..|..+.
T Consensus 205 ~~l----~~~~~L~~L~ls~n~l~-~~~~~-~~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~- 275 (597)
T 3oja_B 205 STL----AIPIAVEELDASHNSIN-VVRGP-VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV- 275 (597)
T ss_dssp SEE----ECCTTCSEEECCSSCCC-EEECS-CCSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT-
T ss_pred ccc----cCCchhheeeccCCccc-ccccc-cCCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhc-
Confidence 753 23457889999999887 34433 336888999999988863 6788888999999999999888888887
Q ss_pred hccCCCCCccEEEccCCcCCCcCCCCC-CCCceEEEecCCCCC
Q 005120 344 SRTLNATETFILDFQNNNLTNISGSFN-IPPNVTVRLRGNPFC 385 (713)
Q Consensus 344 ~~~l~~~~L~~L~ls~N~l~~i~~~~~-~~~l~~l~l~~N~~~ 385 (713)
.+++|+.|+|++|++++++.... ++.++.|+|++|++.
T Consensus 276 ----~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~ 314 (597)
T 3oja_B 276 ----KMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL 314 (597)
T ss_dssp ----TCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC
T ss_pred ----CccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC
Confidence 67888889999999888876654 788888999988876
No 46
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=4.6e-29 Score=266.91 Aligned_cols=248 Identities=20% Similarity=0.198 Sum_probs=177.0
Q ss_pred CEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 005120 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (713)
Q Consensus 109 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (713)
...++++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|++++|
T Consensus 34 ~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (353)
T 2z80_A 34 GICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYN 110 (353)
T ss_dssp SEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred eEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCC
Confidence 44678888888 5677654 58999999999999877778999999999999999999888888999999999999999
Q ss_pred ccccccchhcCCCCCccEEecccCCCcCCCC-cCCCCCCCCcEEEccccc-CCCCCCcccccCCCCCCEEEccCCCCccC
Q 005120 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNN-FEGTTIPASYSNMSKLLKLSLRNCSLQGP 266 (713)
Q Consensus 189 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 266 (713)
.+++..+..+..+++|++|++++|+++...+ ..+..+++|++|++++|+ ++. ..+..+.++++|++|++++|++++.
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~-~~~~~~~~l~~L~~L~l~~n~l~~~ 189 (353)
T 2z80_A 111 YLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTK-IQRKDFAGLTFLEELEIDASDLQSY 189 (353)
T ss_dssp CCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCE-ECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred cCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccc-cCHHHccCCCCCCEEECCCCCcCcc
Confidence 9987666668889999999999998885444 467788888888888884 543 3455677777777777777777766
Q ss_pred CC-CCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhc
Q 005120 267 MP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSR 345 (713)
Q Consensus 267 ~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 345 (713)
.| .+..+++|++|++++|.++ .+|.. .+..+++|+.|++++|++++..+..+....
T Consensus 190 ~~~~l~~l~~L~~L~l~~n~l~-~~~~~----------------------~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~ 246 (353)
T 2z80_A 190 EPKSLKSIQNVSHLILHMKQHI-LLLEI----------------------FVDVTSSVECLELRDTDLDTFHFSELSTGE 246 (353)
T ss_dssp CTTTTTTCSEEEEEEEECSCST-THHHH----------------------HHHHTTTEEEEEEESCBCTTCCCC------
T ss_pred CHHHHhccccCCeecCCCCccc-cchhh----------------------hhhhcccccEEECCCCcccccccccccccc
Confidence 55 5666666666666666654 33322 233345555555555555543333322111
Q ss_pred cCCCCCccEEEccCCcCCC-----cCCCC-CCCCceEEEecCCCCC
Q 005120 346 TLNATETFILDFQNNNLTN-----ISGSF-NIPPNVTVRLRGNPFC 385 (713)
Q Consensus 346 ~l~~~~L~~L~ls~N~l~~-----i~~~~-~~~~l~~l~l~~N~~~ 385 (713)
....++.+++++|.+++ ++..+ .+++++.|++++|.+.
T Consensus 247 --~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 247 --TNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp --CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred --ccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 23456667777777664 33333 3788999999999987
No 47
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=1.9e-27 Score=274.22 Aligned_cols=179 Identities=19% Similarity=0.226 Sum_probs=139.0
Q ss_pred CCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccC
Q 005120 49 DDYSKLSNWNRGDPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGN 128 (713)
Q Consensus 49 ~~~~~l~~w~~~~~C~~~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~ 128 (713)
|+...++.|+..-|. .|....|.. .-++.+=++.+++ .+|..+. +++++|||++|+|++..|.+|.+
T Consensus 8 ~~~~~~~~~~~~~p~--~~~~c~~~~--------~~~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~ 74 (635)
T 4g8a_A 8 DDDDKLAAANSSIPE--SWEPCVEVV--------PNITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFS 74 (635)
T ss_dssp -------------------CCSEEEE--------TTTEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTT
T ss_pred CCcchhhcccCCCCC--CCCCccccC--------CCCEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhC
Confidence 334456666655443 254434421 1134555666776 4565542 47999999999999888889999
Q ss_pred CCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEe
Q 005120 129 IKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHML 208 (713)
Q Consensus 129 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 208 (713)
+++|++|+|++|+|+++.|++|.++++|++|+|++|+|++..+..|.++++|++|++++|++++..+..|+.+++|++|+
T Consensus 75 l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 75 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 99999999999999998899999999999999999999988888999999999999999999988888899999999999
Q ss_pred cccCCCcCC-CCcCCCCCCCCcEEEcccccCCC
Q 005120 209 LDNNNLTGY-LPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 209 L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
+++|.+++. .|..++.+++|++|++++|++++
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccc
Confidence 999999864 57888999999999999998754
No 48
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=6.4e-28 Score=266.93 Aligned_cols=226 Identities=20% Similarity=0.252 Sum_probs=145.7
Q ss_pred CCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEc
Q 005120 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHM 185 (713)
Q Consensus 106 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 185 (713)
++|++|+|++|+|++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 46677777777777666667777777777777777777666667777777777777777777666666667777777777
Q ss_pred cCCccccccchhcCCCCCccEEeccc-CCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCc
Q 005120 186 NNNSISGQIPPELSRLPSLVHMLLDN-NNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQ 264 (713)
Q Consensus 186 ~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 264 (713)
++|.+....+..|..+++|++|++++ |.+....+..|..+++|++|++++|++++ +| .+..+++|++|+|++|+++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~--~~-~~~~l~~L~~L~Ls~N~l~ 231 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD--MP-NLTPLVGLEELEMSGNHFP 231 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS--CC-CCTTCTTCCEEECTTSCCS
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc--cc-cccccccccEEECcCCcCc
Confidence 77777665555666777777777766 33443333456666667777777766653 23 3556666666666666666
Q ss_pred cCCC-CCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccCCcccceeecccccCc
Q 005120 265 GPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (713)
Q Consensus 265 ~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (713)
+..| .+..+++|+.|++++|++++..|..+.. ++|+.|+|++|+|++..+..|..+++|+.|+|++|++.
T Consensus 232 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 232 EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 6555 4566666666666666666433332222 55666666666666555566666777777777777665
No 49
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.1e-28 Score=255.65 Aligned_cols=252 Identities=18% Similarity=0.230 Sum_probs=163.1
Q ss_pred eEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEcccc
Q 005120 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (713)
Q Consensus 85 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 164 (713)
+.++.++++++. +|..+ .++|++|++++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 445555555543 33322 356777777777777666666777777777777777777666667777777777777777
Q ss_pred C-CCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCC
Q 005120 165 Y-ISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (713)
Q Consensus 165 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 243 (713)
. +....|..|..+++|++|++++|.+++..+..+..+++|++|++++|++++..+..+..+++|++|++++|++++ ..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-EC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc-cC
Confidence 5 665556667777777777777777776666667777777777777777776555566677777777777777764 23
Q ss_pred cccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc--cCccEEEccCCcCcccCChhccCC
Q 005120 244 PASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGL 320 (713)
Q Consensus 244 ~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l 320 (713)
+..+..+++|++|++++|++++..| .+..+++|+.|++++|.+++ +|...+. ++|+.|++++|.+....+.. .-+
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~ 247 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRALQYLRLNDNPWVCDCRAR-PLW 247 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC-CCHHHHTTCTTCCEEECCSSCEECSGGGH-HHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCc-CCHHHcccCcccCEEeccCCCccCCCCcH-HHH
Confidence 3446667777777777777776655 56667777777777777763 3332222 56777777777776433221 122
Q ss_pred cccceeecccccCcccCCchhh
Q 005120 321 PRLQRLFIANNSLSGSIPSSIW 342 (713)
Q Consensus 321 ~~L~~L~L~~N~l~~~~p~~~~ 342 (713)
..++.+..+.|.+....|..+.
T Consensus 248 ~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 248 AWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp HHHHHCCSEECCCBEEESGGGT
T ss_pred HHHHhcccccCccccCCchHhC
Confidence 3455666777777777777654
No 50
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3e-30 Score=271.18 Aligned_cols=246 Identities=22% Similarity=0.251 Sum_probs=191.5
Q ss_pred CcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCC-CcCCCcccc-------CCCCCceEecccCCCCCcCCccC--
Q 005120 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKI-SGSIPKEIG-------NIKSLELLLLNGNELTGSLPEEL-- 150 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~-- 150 (713)
..+++.|++++|.+ .+|..+... |+.|+|++|.+ ...+|..+. ++++|++|+|++|++++.+|..+
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 35678888888888 667666544 88888888888 445666665 78899999999999988888876
Q ss_pred CCCCCCCEEEccccCCCCCCchhhhcC-----CCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCC--CCcCC-
Q 005120 151 GYLPKLDRIQIDQNYISGSLPKSFANL-----NKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGY--LPPEL- 222 (713)
Q Consensus 151 ~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~~~~l- 222 (713)
..+++|++|+|++|++++. |..+..+ ++|++|++++|++.+..|..|..+++|++|++++|++.+. .+..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 8889999999999998877 7777777 8899999999999888888888899999999999987654 23333
Q ss_pred -CCCCCCcEEEcccccCCCC-CCc-ccccCCCCCCEEEccCCCCccCCC--CCCCCCCccEEEccCCCCcccCCCCcccc
Q 005120 223 -SELPKLLILQLDNNNFEGT-TIP-ASYSNMSKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQLNGSIPPGRLSL 297 (713)
Q Consensus 223 -~~l~~L~~L~L~~N~l~~~-~~~-~~~~~l~~L~~L~L~~N~l~~~~~--~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~ 297 (713)
..+++|++|++++|++++. .++ ..+..+++|++|++++|++++..| .+..+++|+.|+|++|+++ .+|.... +
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~ 274 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-A 274 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-S
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-C
Confidence 7788899999999888731 112 334577888888888888888664 5666788888888888888 7777655 7
Q ss_pred CccEEEccCCcCcccCChhccCCcccceeecccccCcc
Q 005120 298 NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 335 (713)
Q Consensus 298 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 335 (713)
+|+.|+|++|+|++. |. +..+++|+.|++++|++++
T Consensus 275 ~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 275 KLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 788888888888866 44 7777888888888887764
No 51
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=8.4e-28 Score=265.07 Aligned_cols=232 Identities=22% Similarity=0.259 Sum_probs=166.9
Q ss_pred cCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcC
Q 005120 98 LSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANL 177 (713)
Q Consensus 98 ~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 177 (713)
+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.++...+..|.++++|++|+|++|+++...+..|..+
T Consensus 58 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 135 (440)
T 3zyj_A 58 VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYL 135 (440)
T ss_dssp CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSC
T ss_pred CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhcc
Confidence 444443 567788888888877777777888888888888888877777777778888888888888776666677777
Q ss_pred CCCCEEEccCCccccccchhcCCCCCccEEecccC-CCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEE
Q 005120 178 NKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN-NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKL 256 (713)
Q Consensus 178 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 256 (713)
++|++|++++|.+....+..|..+++|++|++++| .+....+..|..+++|++|++++|+++. +| .+..+++|++|
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~--~~-~~~~l~~L~~L 212 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE--IP-NLTPLIKLDEL 212 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS--CC-CCTTCSSCCEE
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc--cc-ccCCCcccCEE
Confidence 88888888888877666667777788888888774 4443444467777788888888887763 44 36677777777
Q ss_pred EccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccCCcccceeecccccCc
Q 005120 257 SLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (713)
Q Consensus 257 ~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (713)
+|++|++++..+ .+..+++|+.|+|++|++++..+..+.. ++|+.|+|++|+|++..+..|..+++|+.|+|++|++.
T Consensus 213 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 213 DLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 777777777655 6777777777777777777443333222 56777777777777666666777777777777777775
No 52
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.4e-27 Score=264.32 Aligned_cols=250 Identities=18% Similarity=0.280 Sum_probs=184.2
Q ss_pred CCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 005120 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (713)
Q Consensus 108 L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (713)
...++.+++.++ .+|..+. ++|++|+|++|++++..|+.|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 457888888887 5676554 6888999999998888888888888888888888888887778888888888888888
Q ss_pred CccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCC
Q 005120 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267 (713)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 267 (713)
|.+++..+..|..+++|++|+|++|+++...+..|..+++|++|++++|+..+...+..|.++++|++|+|++|++++
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-- 210 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-- 210 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS--
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc--
Confidence 888876666677788888888888877766666677777777777776433221122234555555555555555443
Q ss_pred CCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhccC
Q 005120 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL 347 (713)
Q Consensus 268 ~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l 347 (713)
+|......+|+.|+|++|+|++..|..|..+++|+.|++++|++++..|..+.
T Consensus 211 ----------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----- 263 (452)
T 3zyi_A 211 ----------------------MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFD----- 263 (452)
T ss_dssp ----------------------CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTT-----
T ss_pred ----------------------cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhc-----
Confidence 33322225666667777777767777888888888888888888877777776
Q ss_pred CCCCccEEEccCCcCCCcCCCC--CCCCceEEEecCCCCCCCCC
Q 005120 348 NATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN 389 (713)
Q Consensus 348 ~~~~L~~L~ls~N~l~~i~~~~--~~~~l~~l~l~~N~~~~~~~ 389 (713)
.+++|+.|+|++|+|+++++.. .+++++.|+|++|+|.|+|.
T Consensus 264 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 264 GLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp TCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 6788888888888888887654 27889999999999998874
No 53
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.5e-27 Score=263.14 Aligned_cols=250 Identities=20% Similarity=0.298 Sum_probs=185.5
Q ss_pred CCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 005120 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (713)
Q Consensus 108 L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (713)
.+.++.+++.++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 457888898888 6777664 7889999999999988888899999999999999998888788888888888888888
Q ss_pred CccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCC
Q 005120 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267 (713)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 267 (713)
|+++...+..|..+++|++|++++|+++...+..|..+++|++|++++|+..+...+..|.++++|++|+|++|+++
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~--- 198 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR--- 198 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS---
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc---
Confidence 88887666678888888888888888876666677777777777777744332122234555555555555555554
Q ss_pred CCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhccC
Q 005120 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL 347 (713)
Q Consensus 268 ~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l 347 (713)
.+|......+|+.|+|++|+|++..|..|..+++|+.|+|++|++++..|..+.
T Consensus 199 ---------------------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----- 252 (440)
T 3zyj_A 199 ---------------------EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFD----- 252 (440)
T ss_dssp ---------------------SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSST-----
T ss_pred ---------------------cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhc-----
Confidence 333322224566666666666666677777888888888888888876676666
Q ss_pred CCCCccEEEccCCcCCCcCCCC--CCCCceEEEecCCCCCCCCC
Q 005120 348 NATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN 389 (713)
Q Consensus 348 ~~~~L~~L~ls~N~l~~i~~~~--~~~~l~~l~l~~N~~~~~~~ 389 (713)
.+++|+.|||++|+|+++++.. .+++++.|+|++|+|.|+|.
T Consensus 253 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 253 NLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred CCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 6677888888888888877543 27888999999999998874
No 54
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=4.6e-28 Score=256.19 Aligned_cols=224 Identities=21% Similarity=0.301 Sum_probs=175.2
Q ss_pred CCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEE
Q 005120 128 NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 207 (713)
Q Consensus 128 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 207 (713)
..+++++|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..+.++++|++|++++|.++ .+|..+..+++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3578999999999998 77888888999999999999999 88889999999999999999998 678889999999999
Q ss_pred ecccCCCcCCCCcCCCC---------CCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccE
Q 005120 208 LLDNNNLTGYLPPELSE---------LPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGY 278 (713)
Q Consensus 208 ~L~~N~l~~~~~~~l~~---------l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~ 278 (713)
++++|++.+.+|..+.. +++|++|++++|+++ .+|..+..+++|++|+|++|++++.++.+..+
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~--~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l----- 228 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR--SLPASIANLQNLKSLKIRNSPLSALGPAIHHL----- 228 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC--CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGC-----
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC--cchHhhcCCCCCCEEEccCCCCCcCchhhccC-----
Confidence 99998888888877654 555555555555554 34444554555555444444444333233333
Q ss_pred EEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEcc
Q 005120 279 LDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQ 358 (713)
Q Consensus 279 L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls 358 (713)
++|++|+|++|.+.+.+|..|..+++|+.|++++|++.+.+|..+. .+++|+.|+++
T Consensus 229 ------------------~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~-----~l~~L~~L~L~ 285 (328)
T 4fcg_A 229 ------------------PKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIH-----RLTQLEKLDLR 285 (328)
T ss_dssp ------------------TTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGG-----GCTTCCEEECT
T ss_pred ------------------CCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhh-----cCCCCCEEeCC
Confidence 4566666666666677788899999999999999999999999988 78999999999
Q ss_pred CCcCCCc-CCCCC-CCCceEEEecCCCC
Q 005120 359 NNNLTNI-SGSFN-IPPNVTVRLRGNPF 384 (713)
Q Consensus 359 ~N~l~~i-~~~~~-~~~l~~l~l~~N~~ 384 (713)
+|++.+. |..+. ++++..+++..|.+
T Consensus 286 ~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 286 GCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp TCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred CCCchhhccHHHhhccCceEEeCCHHHH
Confidence 9988875 44454 88999999987765
No 55
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.95 E-value=1.5e-27 Score=263.68 Aligned_cols=273 Identities=19% Similarity=0.184 Sum_probs=227.0
Q ss_pred CCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCE
Q 005120 79 DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDR 158 (713)
Q Consensus 79 ~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 158 (713)
..+.+++.|++++|.+++. + ++++++|++|++++|++++ +| ++.+++|++|++++|++++. + +..+++|++
T Consensus 82 ~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~ 152 (457)
T 3bz5_A 82 SQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTE 152 (457)
T ss_dssp TTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCE
T ss_pred ccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCE
Confidence 3567899999999999974 3 8999999999999999997 44 89999999999999999974 3 889999999
Q ss_pred EEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccC
Q 005120 159 IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNF 238 (713)
Q Consensus 159 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 238 (713)
|++++|...+.+ .+..+++|++|++++|++++. | +..+++|++|++++|++++. .++.+++|++|++++|++
T Consensus 153 L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l 224 (457)
T 3bz5_A 153 LDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKL 224 (457)
T ss_dssp EECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCC
T ss_pred EECCCCCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcc
Confidence 999999766555 488999999999999999974 4 88999999999999999975 488999999999999999
Q ss_pred CCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCC-------CccEEEccCCCCcccCCCCccccCccEEEccCCcCc
Q 005120 239 EGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIP-------NLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLT 310 (713)
Q Consensus 239 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~-------~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~ 310 (713)
++ +| +..+++|++|++++|++++.++ .+..+. +|+.|++++|.+.+.+|.. ..++|+.|++++|.+.
T Consensus 225 ~~--ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~-~l~~L~~L~Ls~n~~l 299 (457)
T 3bz5_A 225 TE--ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAE-GCRKIKELDVTHNTQL 299 (457)
T ss_dssp SC--CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECT-TCTTCCCCCCTTCTTC
T ss_pred cc--cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccccc-ccccCCEEECCCCccc
Confidence 96 45 8899999999999999998764 344333 5566666777666666632 2278999999999987
Q ss_pred ccCCh--------hccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCCCCCCceEEEecCC
Q 005120 311 GTIPS--------NFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGN 382 (713)
Q Consensus 311 ~~~p~--------~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~l~~N 382 (713)
+.+|. .++.+++|+.|++++|+|++ ++ +. .+++|+.||+++|+|++++ .+..|.++.|
T Consensus 300 ~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~-l~--l~-----~l~~L~~L~l~~N~l~~l~------~L~~L~l~~n 365 (457)
T 3bz5_A 300 YLLDCQAAGITELDLSQNPKLVYLYLNNTELTE-LD--VS-----HNTKLKSLSCVNAHIQDFS------SVGKIPALNN 365 (457)
T ss_dssp CEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC-CC--CT-----TCTTCSEEECCSSCCCBCT------TGGGSSGGGT
T ss_pred ceeccCCCcceEechhhcccCCEEECCCCcccc-cc--cc-----cCCcCcEEECCCCCCCCcc------ccccccccCC
Confidence 77664 35667899999999999997 43 55 7889999999999999853 4555667777
Q ss_pred CCCCC
Q 005120 383 PFCLN 387 (713)
Q Consensus 383 ~~~~~ 387 (713)
.+.|.
T Consensus 366 ~l~g~ 370 (457)
T 3bz5_A 366 NFEAE 370 (457)
T ss_dssp SEEEE
T ss_pred cEEec
Confidence 76554
No 56
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=2.3e-27 Score=248.43 Aligned_cols=228 Identities=20% Similarity=0.232 Sum_probs=132.0
Q ss_pred EEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCC--CchhhhcCCCCCEEEccC
Q 005120 110 ILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGS--LPKSFANLNKTRHFHMNN 187 (713)
Q Consensus 110 ~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~ 187 (713)
.++++++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++.. .+..+..+++|++|++++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 4555555555 3444332 4566666666666644444566666666666666666532 256666677777777777
Q ss_pred CccccccchhcCCCCCccEEecccCCCcCCCC-cCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCcc-
Q 005120 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG- 265 (713)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~- 265 (713)
|.+.. +|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++ ..+..+..+++|++|++++|.+++
T Consensus 88 n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 88 NGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-AFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp CSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEE-CSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred Ccccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCc-cchhhcccCcCCCEEECCCCccccc
Confidence 77663 45556667777777777777665443 456666666777776666664 455556666666666666666654
Q ss_pred CCC-CCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhh
Q 005120 266 PMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (713)
Q Consensus 266 ~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 342 (713)
..| .+..+++|+.|++++|.+++..|..+.. ++|+.|+|++|++++..+..+..+++|+.|++++|++++..|..+.
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 244 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH
Confidence 222 4555566666666666655333322211 4455555555555544444555555555555555555555544443
No 57
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.8e-27 Score=246.59 Aligned_cols=237 Identities=19% Similarity=0.236 Sum_probs=161.6
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCC-CCCcCCccCCCCCCCCEEE
Q 005120 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE-LTGSLPEELGYLPKLDRIQ 160 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~ 160 (713)
.+++.|++++|.+++..+..|..+++|++|++++|.+++..|..|..+++|++|+|++|. ++...|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 467777777777776666667777777777777777776666677777777777777775 6655566677777777777
Q ss_pred ccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
+++|.+++..|..|.++++|++|++++|.+++..+..|..+++|++|++++|++++..+..+..+++|++|++++|.+++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 77777776666677777777777777777776655666777777777777777776555567777777777777777765
Q ss_pred CCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccC
Q 005120 241 TTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSG 319 (713)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 319 (713)
..|..+..+++|++|++++|++++.++ .+..+++|+.|++++|++....+...+...++.+..+.+.+....|..+.+
T Consensus 192 -~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 192 -VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp -ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGGTT
T ss_pred -cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchHhCC
Confidence 456667777777777777777776555 466677777777777777644433322244555556666666666665543
No 58
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=4.9e-26 Score=251.24 Aligned_cols=261 Identities=25% Similarity=0.267 Sum_probs=170.1
Q ss_pred CcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEE
Q 005120 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (713)
..+++.|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .|.++++|++|+
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 3567788888887776 4532 3677777777777774 2221 1577777777777775 55 477777777777
Q ss_pred ccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
+++|++++ +|..+ .+|++|++++|++++ +| .+..+++|++|++++|++++ +|... ++|++|++++|+++
T Consensus 160 l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~- 228 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE- 228 (454)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-
T ss_pred CCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-
Confidence 77777775 44332 477777777777776 44 57777777777777777775 33322 47777777777776
Q ss_pred CCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCC
Q 005120 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGL 320 (713)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l 320 (713)
.+| .+..+++|++|++++|++++.+.. +++|+.|++++|++++ +|.. ..+|+.|++++|++++. |.. .
T Consensus 229 -~lp-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~-l~~~--~~~L~~L~ls~N~l~~l-~~~---~ 296 (454)
T 1jl5_A 229 -ELP-ELQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTD-LPEL--PQSLTFLDVSENIFSGL-SEL---P 296 (454)
T ss_dssp -SCC-CCTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCSEE-SCC---C
T ss_pred -ccc-ccCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccc-cCcc--cCcCCEEECcCCccCcc-cCc---C
Confidence 355 377777777777777777764332 3677777777777773 5543 25677777777777752 111 1
Q ss_pred cccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCCCCCCceEEEecCCCCC
Q 005120 321 PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (713)
Q Consensus 321 ~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~l~~N~~~ 385 (713)
++|+.|++++|++++ ++. -.++|+.|++++|++++++.. +++++.|++++|.+.
T Consensus 297 ~~L~~L~l~~N~l~~-i~~--------~~~~L~~L~Ls~N~l~~lp~~--~~~L~~L~L~~N~l~ 350 (454)
T 1jl5_A 297 PNLYYLNASSNEIRS-LCD--------LPPSLEELNVSNNKLIELPAL--PPRLERLIASFNHLA 350 (454)
T ss_dssp TTCCEEECCSSCCSE-ECC--------CCTTCCEEECCSSCCSCCCCC--CTTCCEEECCSSCCS
T ss_pred CcCCEEECcCCcCCc-ccC--------CcCcCCEEECCCCcccccccc--CCcCCEEECCCCccc
Confidence 466666676666663 221 113566777777777765543 356667777777665
No 59
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=1.8e-27 Score=262.74 Aligned_cols=268 Identities=25% Similarity=0.346 Sum_probs=206.0
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCC-------------ceEecccCCCCCcCCc
Q 005120 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSL-------------ELLLLNGNELTGSLPE 148 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L-------------~~L~L~~N~l~~~~p~ 148 (713)
.+++.|++++|++ +.+|+.++++++|++|++++|.+.+.+|.+++++++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 5799999999999 7899999999999999999999999999999998875 999999999986 344
Q ss_pred cCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCC
Q 005120 149 ELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKL 228 (713)
Q Consensus 149 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 228 (713)
. .++|++|++++|.+++ +|.. +++|++|++++|++++. +.. .++|++|++++|++++ +| .++.+++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 2 4789999999999997 5643 47899999999999853 221 2689999999999996 66 59999999
Q ss_pred cEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCc
Q 005120 229 LILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNK 308 (713)
Q Consensus 229 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~ 308 (713)
++|++++|++++ +|.. ..+|++|++++|++++. |.+..+++|+.|++++|++++ +|.. ..+|++|++++|+
T Consensus 156 ~~L~l~~N~l~~--lp~~---~~~L~~L~L~~n~l~~l-~~~~~l~~L~~L~l~~N~l~~-l~~~--~~~L~~L~l~~n~ 226 (454)
T 1jl5_A 156 KIIDVDNNSLKK--LPDL---PPSLEFIAAGNNQLEEL-PELQNLPFLTAIYADNNSLKK-LPDL--PLSLESIVAGNNI 226 (454)
T ss_dssp CEEECCSSCCSC--CCCC---CTTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSSCCSS-CCCC--CTTCCEEECCSSC
T ss_pred CEEECCCCcCcc--cCCC---cccccEEECcCCcCCcC-ccccCCCCCCEEECCCCcCCc-CCCC--cCcccEEECcCCc
Confidence 999999999985 5554 35899999999999984 578999999999999999984 6653 3689999999999
Q ss_pred CcccCChhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCCCCCCceEEEecCCCCCC
Q 005120 309 LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 386 (713)
Q Consensus 309 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~l~~N~~~~ 386 (713)
++ .+| .+..+++|+.|++++|++++ +|.. .++|+.|++++|++++++.. .++++.|++++|.+.+
T Consensus 227 l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~--------~~~L~~L~l~~N~l~~l~~~--~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 227 LE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL--------PPSLEALNVRDNYLTDLPEL--PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC--------CTTCCEEECCSSCCSCCCCC--CTTCCEEECCSSCCSE
T ss_pred CC-ccc-ccCCCCCCCEEECCCCcCCc-cccc--------ccccCEEECCCCcccccCcc--cCcCCEEECcCCccCc
Confidence 99 566 48999999999999999984 6642 36789999999999987654 3778899999998764
No 60
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4.5e-29 Score=262.18 Aligned_cols=247 Identities=19% Similarity=0.240 Sum_probs=154.2
Q ss_pred ccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCC-CcCCccCC-------CCCCCCEEEccccCCCCCCchh
Q 005120 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELT-GSLPEELG-------YLPKLDRIQIDQNYISGSLPKS 173 (713)
Q Consensus 102 ~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~ 173 (713)
++..++|++|++++|.+ .+|..+... |++|+|++|.++ ..+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45566788888888888 567766544 888888888873 44555544 6778888888888887777776
Q ss_pred h--hcCCCCCEEEccCCccccccchhcCCC-----CCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCC--Cc
Q 005120 174 F--ANLNKTRHFHMNNNSISGQIPPELSRL-----PSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT--IP 244 (713)
Q Consensus 174 ~--~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--~~ 244 (713)
+ ..+++|++|++++|++++. |..+..+ ++|++|++++|++++..+..++.+++|++|++++|++.+ . .+
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~ 192 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELG-ERGLI 192 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCH-HHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCc-chHHH
Confidence 5 7777888888888877766 6666555 777777777777776666777777777777777777654 2 22
Q ss_pred ccc--cCCCCCCEEEccCCCCccCCC----CCCCCCCccEEEccCCCCcccCCCCccc--cCccEEEccCCcCcccCChh
Q 005120 245 ASY--SNMSKLLKLSLRNCSLQGPMP----DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSN 316 (713)
Q Consensus 245 ~~~--~~l~~L~~L~L~~N~l~~~~~----~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~N~l~~~~p~~ 316 (713)
..+ ..+++|++|++++|++++... .+..+++|+.|++++|++++.+|...+. ++|+.|+|++|+|+ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 333 566667777777766663211 1234556666666666666544322221 45555555555555 34444
Q ss_pred ccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCC
Q 005120 317 FSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364 (713)
Q Consensus 317 ~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~ 364 (713)
+. ++|+.|++++|+|++. |. +. .+++|+.|++++|+|++
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~-~~-----~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS-PD-----ELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC-TT-----TSCEEEEEECTTCTTTC
T ss_pred cc--CCceEEECCCCCCCCC-hh-Hh-----hCCCCCEEeccCCCCCC
Confidence 33 5555555555555533 33 33 34455555555555543
No 61
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2e-28 Score=257.86 Aligned_cols=264 Identities=23% Similarity=0.203 Sum_probs=214.3
Q ss_pred ceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEcc
Q 005120 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (713)
Q Consensus 83 ~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 162 (713)
+++.++++.+++.......+..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..+ +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 56677788888876666666778899999999999998888899999999999999999987655 8899999999999
Q ss_pred ccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCC
Q 005120 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (713)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 242 (713)
+|++++.. ..++|++|++++|.+++..+.. +++|++|++++|++++..+..+..+++|++|++++|.+++ .
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~ 159 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT-V 159 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCE-E
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCc-c
Confidence 99988543 3489999999999998766543 5789999999999998878888999999999999999986 4
Q ss_pred Ccccc-cCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccCC
Q 005120 243 IPASY-SNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGL 320 (713)
Q Consensus 243 ~~~~~-~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l 320 (713)
.+..+ ..+++|++|++++|.+++.. ....+++|+.|++++|++++ +|..+.. ++|+.|+|++|+|++ +|..+..+
T Consensus 160 ~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l 236 (317)
T 3o53_A 160 NFAELAASSDTLEHLNLQYNFIYDVK-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (317)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEE-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred cHHHHhhccCcCCEEECCCCcCcccc-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcC
Confidence 45555 57899999999999998764 34458899999999999984 5444333 789999999999984 67778888
Q ss_pred cccceeecccccCc-ccCCchhhhhccCCCCCccEEEcc-CCcCCCc
Q 005120 321 PRLQRLFIANNSLS-GSIPSSIWQSRTLNATETFILDFQ-NNNLTNI 365 (713)
Q Consensus 321 ~~L~~L~L~~N~l~-~~~p~~~~~~~~l~~~~L~~L~ls-~N~l~~i 365 (713)
++|+.|++++|+++ +.+|..+. .+++|+.++++ .+.+++.
T Consensus 237 ~~L~~L~l~~N~~~~~~~~~~~~-----~~~~L~~l~l~~~~~l~~~ 278 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCGTLRDFFS-----KNQRVQTVAKQTVKKLTGQ 278 (317)
T ss_dssp TTCCEEECTTCCCBHHHHHHHHH-----TCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEccCCCccCcCHHHHHh-----ccccceEEECCCchhccCC
Confidence 99999999999998 66676666 56777777777 3445443
No 62
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=5.5e-27 Score=266.92 Aligned_cols=287 Identities=26% Similarity=0.313 Sum_probs=229.5
Q ss_pred CCCCCCCCCCCCCCceeecCCCCC-CCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCC
Q 005120 54 LSNWNRGDPCTSNWTGVLCFNTTM-DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSL 132 (713)
Q Consensus 54 l~~w~~~~~C~~~w~gv~C~~~~~-~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L 132 (713)
+..|....+|+ .|+|..|..... .....+++.|++++++++ .+|..+. ++|++|+|++|.|+ .+|. .+++|
T Consensus 12 w~~W~~~~~~~-~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L 83 (622)
T 3g06_A 12 WSAWRRAAPAE-ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPEL 83 (622)
T ss_dssp HHHHHHTCCGG-GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTC
T ss_pred HHHHHhcCCcc-hhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCC
Confidence 45576554442 686643211000 001235899999999998 6777665 89999999999999 4665 57999
Q ss_pred ceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccC
Q 005120 133 ELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 212 (713)
Q Consensus 133 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 212 (713)
++|+|++|+++. +|. .+++|++|+|++|++++. |. .+++|+.|++++|++++ +|.. +++|++|++++|
T Consensus 84 ~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N 151 (622)
T 3g06_A 84 RTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDN 151 (622)
T ss_dssp CEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSS
T ss_pred CEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCC
Confidence 999999999984 554 789999999999999964 43 67899999999999986 4443 489999999999
Q ss_pred CCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCC
Q 005120 213 NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPP 292 (713)
Q Consensus 213 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~ 292 (713)
++++ +|. .+++|+.|++++|.+++ +| ..+++|+.|++++|++++.+.. +++|+.|++++|.++ .+|.
T Consensus 152 ~l~~-l~~---~~~~L~~L~L~~N~l~~--l~---~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~-~l~~ 218 (622)
T 3g06_A 152 QLAS-LPA---LPSELCKLWAYNNQLTS--LP---MLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-SLPA 218 (622)
T ss_dssp CCSC-CCC---CCTTCCEEECCSSCCSC--CC---CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS-SCCC
T ss_pred cCCC-cCC---ccCCCCEEECCCCCCCC--Cc---ccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCccc-ccCC
Confidence 9985 443 35789999999999985 55 5579999999999999975543 479999999999999 6775
Q ss_pred CccccCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCCC-C
Q 005120 293 GRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFN-I 371 (713)
Q Consensus 293 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~-~ 371 (713)
. .++|+.|+|++|+|++ +| ..+++|+.|++++|+|+ .+|. .+++|+.|+|++|+|+.++..+. +
T Consensus 219 ~--~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~--------~~~~L~~L~Ls~N~L~~lp~~l~~l 283 (622)
T 3g06_A 219 L--PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM--------LPSGLLSLSVYRNQLTRLPESLIHL 283 (622)
T ss_dssp C--CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC--------CCTTCCEEECCSSCCCSCCGGGGGS
T ss_pred C--CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc--------ccccCcEEeCCCCCCCcCCHHHhhc
Confidence 3 3789999999999996 45 56689999999999998 5776 24789999999999999887665 8
Q ss_pred CCceEEEecCCCCCCCC
Q 005120 372 PPNVTVRLRGNPFCLNT 388 (713)
Q Consensus 372 ~~l~~l~l~~N~~~~~~ 388 (713)
++++.|+|++|++.+..
T Consensus 284 ~~L~~L~L~~N~l~~~~ 300 (622)
T 3g06_A 284 SSETTVNLEGNPLSERT 300 (622)
T ss_dssp CTTCEEECCSCCCCHHH
T ss_pred cccCEEEecCCCCCCcC
Confidence 99999999999997643
No 63
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=2.2e-25 Score=228.96 Aligned_cols=215 Identities=21% Similarity=0.280 Sum_probs=172.3
Q ss_pred CCCCCCCceeecCCCCCCCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccC
Q 005120 61 DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGN 140 (713)
Q Consensus 61 ~~C~~~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N 140 (713)
+.| .|.|+.|... .+.+.+++++++++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 3 ~~C--~~~~~~C~c~------~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 71 (270)
T 2o6q_A 3 ALC--KKDGGVCSCN------NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDN 71 (270)
T ss_dssp CCB--GGGTCSBEEE------TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSS
T ss_pred ccC--CCCCCCCEeC------CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCC
Confidence 567 6999999642 356789999999884 565554 67999999999999777778999999999999999
Q ss_pred CCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCc
Q 005120 141 ELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPP 220 (713)
Q Consensus 141 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 220 (713)
.++...+..|..+++|++|+|++|++++..+..|.++++|++|++++|.+++..+..|..+++|++|++++|++++..+.
T Consensus 72 ~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 151 (270)
T 2o6q_A 72 KLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKG 151 (270)
T ss_dssp CCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred ccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHh
Confidence 99877777788899999999999999887777888888899999998888887777788888888888888888876666
Q ss_pred CCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCc
Q 005120 221 ELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLN 287 (713)
Q Consensus 221 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~ 287 (713)
.+..+++|++|++++|++++ ..+..|..+++|++|++++|++++.++ .+..+++|+.|++++|++.
T Consensus 152 ~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 152 VFDKLTSLKELRLYNNQLKR-VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred HccCCcccceeEecCCcCcE-eChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 67888888888888888875 344557777778888888877776655 4666777777777777665
No 64
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1.1e-25 Score=231.82 Aligned_cols=208 Identities=22% Similarity=0.259 Sum_probs=123.8
Q ss_pred CCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEcc
Q 005120 107 YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMN 186 (713)
Q Consensus 107 ~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 186 (713)
+|++|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~-- 106 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV-- 106 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE--
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE--
Confidence 466666666666655554555566666666666655555555555555555555555555544444444444455444
Q ss_pred CCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccC
Q 005120 187 NNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP 266 (713)
Q Consensus 187 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 266 (713)
+++|++++..+..+..+++|++|++++|++++..+|..+..+++|++|++++|++++.
T Consensus 107 ----------------------l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~ 164 (276)
T 2z62_A 107 ----------------------AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (276)
T ss_dssp ----------------------CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred ----------------------CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcC
Confidence 4444444444444555555555555555555433455566666666666666666554
Q ss_pred CC-CCCCCCCcc----EEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCcccceeecccccCcccCC
Q 005120 267 MP-DLSRIPNLG----YLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP 338 (713)
Q Consensus 267 ~~-~l~~l~~L~----~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 338 (713)
.+ .+..+++|+ .|++++|.+++..+......+|+.|+|++|++++..+..|..+++|+.|++++|++++..|
T Consensus 165 ~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 165 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 43 333333333 6777777777433333222578888888888887766777888888888888888886554
No 65
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.9e-27 Score=250.32 Aligned_cols=246 Identities=20% Similarity=0.208 Sum_probs=215.5
Q ss_pred CcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEE
Q 005120 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (713)
+++++.|++++|.+++..+..+..+++|++|+|++|++++..+ |..+++|++|+|++|.+++.. ..++|++|+
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~ 105 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEE
Confidence 4689999999999998888899999999999999999997654 999999999999999998543 348999999
Q ss_pred ccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCC-CCCCCcEEEcccccCC
Q 005120 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELS-ELPKLLILQLDNNNFE 239 (713)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~-~l~~L~~L~L~~N~l~ 239 (713)
+++|++++..+.. +++|++|++++|++++..+..+..+++|++|++++|++++..+..+. .+++|++|++++|+++
T Consensus 106 l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 182 (317)
T 3o53_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (317)
T ss_dssp CCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc
Confidence 9999999766554 67899999999999998888999999999999999999987777764 7899999999999998
Q ss_pred CCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCc-ccCChhc
Q 005120 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLT-GTIPSNF 317 (713)
Q Consensus 240 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~-~~~p~~~ 317 (713)
+ ++ ....+++|++|+|++|++++.++.+..+++|+.|++++|+++ .+|..+.. ++|+.|++++|.+. +.+|..+
T Consensus 183 ~--~~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 258 (317)
T 3o53_A 183 D--VK-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (317)
T ss_dssp E--EE-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHH
T ss_pred c--cc-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHH
Confidence 5 33 344599999999999999988888889999999999999999 67765433 79999999999999 7888999
Q ss_pred cCCcccceeecc-cccCcccCCch
Q 005120 318 SGLPRLQRLFIA-NNSLSGSIPSS 340 (713)
Q Consensus 318 ~~l~~L~~L~L~-~N~l~~~~p~~ 340 (713)
..+++|+.|+++ .+.++|..|..
T Consensus 259 ~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 259 SKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp HTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred hccccceEEECCCchhccCCchhc
Confidence 999999999999 45677665543
No 66
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=5.1e-27 Score=261.58 Aligned_cols=236 Identities=24% Similarity=0.215 Sum_probs=176.5
Q ss_pred cCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCE
Q 005120 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (713)
Q Consensus 103 ~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 182 (713)
..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.|++..+ .++|++
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 344578888888888888777888888888888888888887665 8888888888888888875433 378888
Q ss_pred EEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCccccc-CCCCCCEEEccCC
Q 005120 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYS-NMSKLLKLSLRNC 261 (713)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-~l~~L~~L~L~~N 261 (713)
|++++|.+++..+. .+++|++|++++|.+++..|..++.+++|++|++++|.+++ ..|..+. .+++|++|+|++|
T Consensus 104 L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~l~~~l~~L~~L~Ls~N 179 (487)
T 3oja_A 104 LHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT-VNFAELAASSDTLEHLNLQYN 179 (487)
T ss_dssp EECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCE-EEGGGGGGGTTTCCEEECTTS
T ss_pred EECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCC-cChHHHhhhCCcccEEecCCC
Confidence 88888888876654 35778888888888888778888888888888888888886 4566664 6888888888888
Q ss_pred CCccCCCCCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCcccCChhccCCcccceeecccccCc-ccCCc
Q 005120 262 SLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS-GSIPS 339 (713)
Q Consensus 262 ~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~ 339 (713)
.+++.++ ...+++|+.|+|++|.+++ +|+.+.. ++|+.|+|++|.|++ +|..+..+++|+.|++++|++. +.+|.
T Consensus 180 ~l~~~~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 180 FIYDVKG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCCEEEC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred ccccccc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 8887643 3457788888888888875 3333222 677788888888775 5666777777888888888777 45555
Q ss_pred hhhhhccCCCCCccEEEc
Q 005120 340 SIWQSRTLNATETFILDF 357 (713)
Q Consensus 340 ~~~~~~~l~~~~L~~L~l 357 (713)
.+. .++.|+.+++
T Consensus 257 ~~~-----~l~~L~~l~~ 269 (487)
T 3oja_A 257 FFS-----KNQRVQTVAK 269 (487)
T ss_dssp HHT-----TCHHHHHHHH
T ss_pred HHH-----hCCCCcEEec
Confidence 554 3444444444
No 67
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2.6e-25 Score=229.17 Aligned_cols=227 Identities=19% Similarity=0.234 Sum_probs=175.3
Q ss_pred CCCCCCCc--eeecCCCCC---CCCC-cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCce
Q 005120 61 DPCTSNWT--GVLCFNTTM---DDGY-LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLEL 134 (713)
Q Consensus 61 ~~C~~~w~--gv~C~~~~~---~~~~-~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~ 134 (713)
|||.+.+. .+.|.+... +..+ .+++.|++++|++++..+..+.++++|++|++++|++++..+..|.++++|++
T Consensus 1 ~~C~~~~~~~~~~c~~~~l~~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (276)
T 2z62_A 1 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 80 (276)
T ss_dssp CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceeccCCceEEecCCCccccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCE
Confidence 46754444 577865432 3323 46999999999999888889999999999999999999888889999999999
Q ss_pred EecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccc-cchhcCCCCCccEEecccCC
Q 005120 135 LLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ-IPPELSRLPSLVHMLLDNNN 213 (713)
Q Consensus 135 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~ 213 (713)
|+|++|.+++..+..|.++++|++|++++|.+.+..+..+.++++|++|++++|.+.+. +|..+..+++|++|++++|+
T Consensus 81 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~ 160 (276)
T 2z62_A 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (276)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred EECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCC
Confidence 99999999998889999999999999999999987777888999999999999998764 57788888888888888888
Q ss_pred CcCCCCcCCCCCCCCc----EEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcc
Q 005120 214 LTGYLPPELSELPKLL----ILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNG 288 (713)
Q Consensus 214 l~~~~~~~l~~l~~L~----~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~ 288 (713)
+++..+..+..+++|+ .|++++|.+++ ++.......+|++|++++|++++.++ .+..+++|+.|++++|++++
T Consensus 161 l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~--~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 161 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF--IQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCEECGGGGHHHHTCTTCCEEEECCSSCCCE--ECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CCcCCHHHhhhhhhccccceeeecCCCcccc--cCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 8876666666666665 67777777763 33333333456666666666665554 34556666666666666554
Q ss_pred c
Q 005120 289 S 289 (713)
Q Consensus 289 ~ 289 (713)
.
T Consensus 239 ~ 239 (276)
T 2z62_A 239 S 239 (276)
T ss_dssp C
T ss_pred c
Confidence 3
No 68
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.9e-26 Score=256.99 Aligned_cols=236 Identities=20% Similarity=0.203 Sum_probs=211.0
Q ss_pred CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEE
Q 005120 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (713)
Q Consensus 80 ~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 159 (713)
.+++|+.|+|++|.+++..|..|+.+++|++|+|++|.+++..| |..+++|++|+|++|.+++..+ .++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34689999999999999888899999999999999999997665 9999999999999999986543 3899999
Q ss_pred EccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCC-CCCCCcEEEcccccC
Q 005120 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELS-ELPKLLILQLDNNNF 238 (713)
Q Consensus 160 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~-~l~~L~~L~L~~N~l 238 (713)
++++|.+++..+. .+++|+.|++++|.+++..|..+..+++|++|++++|.+++..|..+. .+++|+.|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999999987665 458899999999999999999999999999999999999998888886 799999999999999
Q ss_pred CCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccCCcCc-ccCChh
Q 005120 239 EGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLT-GTIPSN 316 (713)
Q Consensus 239 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~-~~~p~~ 316 (713)
++ ++ .+..+++|++|+|++|.+++.++.+..+++|+.|+|++|.+++ +|..+.. ++|+.|++++|.+. +.+|..
T Consensus 182 ~~--~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YD--VK-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CE--EE-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred cc--cc-ccccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 86 33 3456999999999999999988888899999999999999994 6765433 79999999999998 778888
Q ss_pred ccCCcccceeecc
Q 005120 317 FSGLPRLQRLFIA 329 (713)
Q Consensus 317 ~~~l~~L~~L~L~ 329 (713)
+..++.|+.++++
T Consensus 258 ~~~l~~L~~l~~~ 270 (487)
T 3oja_A 258 FSKNQRVQTVAKQ 270 (487)
T ss_dssp HTTCHHHHHHHHH
T ss_pred HHhCCCCcEEecc
Confidence 9999999999886
No 69
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.92 E-value=7.6e-28 Score=266.95 Aligned_cols=304 Identities=17% Similarity=0.156 Sum_probs=206.2
Q ss_pred cceeEEEcCCCCCccccCccc-cCCC----CCCEEECCCCCCCc----CCCccccCCCCCceEecccCCCCCcCCcc---
Q 005120 82 LHLRELQLLNLNLSGNLSPEI-GRLS----YLTILDFMWNKISG----SIPKEIGNIKSLELLLLNGNELTGSLPEE--- 149 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~-~~l~----~L~~L~Ls~n~i~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--- 149 (713)
++++.|++++|.+++..+..+ ..++ +|++|+|++|+++. .++..+..+++|++|+|++|.++...+..
T Consensus 56 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 135 (461)
T 1z7x_W 56 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 135 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHH
Confidence 578888888888766444333 2344 68888888888773 44777788888888888888876443332
Q ss_pred --CCCCCCCCEEEccccCCCCCC----chhhhcCCCCCEEEccCCccccccchhcC-----CCCCccEEecccCCCcCC-
Q 005120 150 --LGYLPKLDRIQIDQNYISGSL----PKSFANLNKTRHFHMNNNSISGQIPPELS-----RLPSLVHMLLDNNNLTGY- 217 (713)
Q Consensus 150 --~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~- 217 (713)
+...++|++|+|++|++++.. +..+..+++|++|++++|.+....+..+. ..++|++|++++|+++..
T Consensus 136 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 215 (461)
T 1z7x_W 136 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN 215 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH
T ss_pred HHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHH
Confidence 223567888888888877643 55666778888888888887655444443 356888888888888753
Q ss_pred ---CCcCCCCCCCCcEEEcccccCCCCC---C-cccccCCCCCCEEEccCCCCccC----CC-CCCCCCCccEEEccCCC
Q 005120 218 ---LPPELSELPKLLILQLDNNNFEGTT---I-PASYSNMSKLLKLSLRNCSLQGP----MP-DLSRIPNLGYLDLSSNQ 285 (713)
Q Consensus 218 ---~~~~l~~l~~L~~L~L~~N~l~~~~---~-~~~~~~l~~L~~L~L~~N~l~~~----~~-~l~~l~~L~~L~Ls~N~ 285 (713)
++..+..+++|++|++++|.+++.. + +..+..+++|++|++++|.++.. .+ .+..+++|+.|++++|.
T Consensus 216 ~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 295 (461)
T 1z7x_W 216 CRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE 295 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCC
T ss_pred HHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCC
Confidence 3555667788888888888776411 1 22234578888888888888763 12 45567788888888888
Q ss_pred CcccCCCCcc------ccCccEEEccCCcCccc----CChhccCCcccceeecccccCcccCCchhhhhccCCCCCccEE
Q 005120 286 LNGSIPPGRL------SLNITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFIL 355 (713)
Q Consensus 286 l~~~ip~~~~------~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L 355 (713)
+++..+.... .++|+.|++++|.+++. ++..+..+++|+.|++++|++++..+..+...-....++|+.|
T Consensus 296 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L 375 (461)
T 1z7x_W 296 LGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVL 375 (461)
T ss_dssp CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred CchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEE
Confidence 7643221111 14788888888888765 4566677788888888888888766655543221125678888
Q ss_pred EccCCcCCC-----cCCCCC-CCCceEEEecCCCCC
Q 005120 356 DFQNNNLTN-----ISGSFN-IPPNVTVRLRGNPFC 385 (713)
Q Consensus 356 ~ls~N~l~~-----i~~~~~-~~~l~~l~l~~N~~~ 385 (713)
++++|++++ ++..+. .+++++|++++|++.
T Consensus 376 ~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 376 WLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp ECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred ECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 888888884 333332 677888888888775
No 70
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=7.3e-25 Score=225.32 Aligned_cols=198 Identities=18% Similarity=0.239 Sum_probs=135.2
Q ss_pred ceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEcc
Q 005120 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (713)
Q Consensus 83 ~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 162 (713)
.+..+++..+.+... .....+++|+.|++++|.+.. + ..+..+++|++|+|++|.+++. +.+..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 344455555555443 234567778888888887763 3 3477788888888888887753 367777788888888
Q ss_pred ccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCC
Q 005120 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (713)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 242 (713)
+|.+++..+..|.++++|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|++++ .
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~ 172 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-L 172 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-C
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc-c
Confidence 887777767777777777777777777776666667777777777777777776666666777777777777777765 3
Q ss_pred CcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCc
Q 005120 243 IPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLN 287 (713)
Q Consensus 243 ~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~ 287 (713)
.+..+..+++|++|++++|++++.++ .+..+++|+.|++++|.+.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 173 PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 44455666667777777766666555 3556666666666666554
No 71
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=4.9e-23 Score=234.40 Aligned_cols=240 Identities=25% Similarity=0.309 Sum_probs=202.7
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEc
Q 005120 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (713)
++++.|++++|+++. +|. .+++|++|+|++|+++. +|. .+++|++|+|++|++++. |. .+++|+.|++
T Consensus 61 ~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEEC
T ss_pred CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEEC
Confidence 689999999999984 555 67899999999999984 665 789999999999999964 44 6789999999
Q ss_pred cccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCC
Q 005120 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (713)
Q Consensus 162 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 241 (713)
++|++++ +|.. +++|++|++++|.+++. |. .+++|+.|++++|++++ +| ..+++|+.|++++|.+++
T Consensus 129 ~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 129 FGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred CCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-
Confidence 9999986 4543 58999999999999863 43 35789999999999996 55 457899999999999985
Q ss_pred CCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCc
Q 005120 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (713)
Q Consensus 242 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (713)
+|.. +++|+.|++++|.++..+. .+++|+.|++++|+++ .+|. ..++|+.|+|++|+|+. +|. .++
T Consensus 196 -l~~~---~~~L~~L~L~~N~l~~l~~---~~~~L~~L~Ls~N~L~-~lp~--~l~~L~~L~Ls~N~L~~-lp~---~~~ 261 (622)
T 3g06_A 196 -LPTL---PSELYKLWAYNNRLTSLPA---LPSGLKELIVSGNRLT-SLPV--LPSELKELMVSGNRLTS-LPM---LPS 261 (622)
T ss_dssp -CCCC---CTTCCEEECCSSCCSSCCC---CCTTCCEEECCSSCCS-CCCC--CCTTCCEEECCSSCCSC-CCC---CCT
T ss_pred -CCCc---cchhhEEECcCCcccccCC---CCCCCCEEEccCCccC-cCCC--CCCcCcEEECCCCCCCc-CCc---ccc
Confidence 5543 5889999999999996554 2478999999999999 4773 34789999999999995 554 678
Q ss_pred ccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcC
Q 005120 322 RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS 366 (713)
Q Consensus 322 ~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~ 366 (713)
+|+.|+|++|+|+ .+|..+. .+++|+.|+|++|.+++..
T Consensus 262 ~L~~L~Ls~N~L~-~lp~~l~-----~l~~L~~L~L~~N~l~~~~ 300 (622)
T 3g06_A 262 GLLSLSVYRNQLT-RLPESLI-----HLSSETTVNLEGNPLSERT 300 (622)
T ss_dssp TCCEEECCSSCCC-SCCGGGG-----GSCTTCEEECCSCCCCHHH
T ss_pred cCcEEeCCCCCCC-cCCHHHh-----hccccCEEEecCCCCCCcC
Confidence 9999999999999 8898887 7789999999999999754
No 72
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.91 E-value=4.9e-27 Score=260.47 Aligned_cols=182 Identities=17% Similarity=0.218 Sum_probs=76.1
Q ss_pred ceeEEEcCCCCCcc----ccCccccCCCCCCEEECCCCCCCcCCCcccc-CCC----CCceEecccCCCCC----cCCcc
Q 005120 83 HLRELQLLNLNLSG----NLSPEIGRLSYLTILDFMWNKISGSIPKEIG-NIK----SLELLLLNGNELTG----SLPEE 149 (713)
Q Consensus 83 ~l~~L~l~~~~l~~----~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~-~l~----~L~~L~L~~N~l~~----~~p~~ 149 (713)
+++.|++++|++++ .++..+..+++|++|+|++|.+....+..+. .++ +|++|+|++|.++. .++..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 44445555444442 1233344444555555555544432222221 122 35555555554442 23444
Q ss_pred CCCCCCCCEEEccccCCCCCCchhhhc-----CCCCCEEEccCCcccccc----chhcCCCCCccEEecccCCCcCCCCc
Q 005120 150 LGYLPKLDRIQIDQNYISGSLPKSFAN-----LNKTRHFHMNNNSISGQI----PPELSRLPSLVHMLLDNNNLTGYLPP 220 (713)
Q Consensus 150 ~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~L~~N~l~~~~~~ 220 (713)
+..+++|++|+|++|.++...+..+.. .++|++|++++|.+++.. +..+..+++|++|++++|.++...+.
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 188 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVR 188 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHH
Confidence 444455555555555444322222211 234555555555444321 33333444555555555544432222
Q ss_pred CCC-----CCCCCcEEEcccccCCCCC---CcccccCCCCCCEEEccCCCCc
Q 005120 221 ELS-----ELPKLLILQLDNNNFEGTT---IPASYSNMSKLLKLSLRNCSLQ 264 (713)
Q Consensus 221 ~l~-----~l~~L~~L~L~~N~l~~~~---~~~~~~~l~~L~~L~L~~N~l~ 264 (713)
.+. ..++|++|++++|.++... ++..+..+++|++|++++|.++
T Consensus 189 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 189 VLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 221 1234555555555444310 2333444455555555555444
No 73
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=7e-24 Score=222.37 Aligned_cols=223 Identities=18% Similarity=0.193 Sum_probs=174.1
Q ss_pred CCCCEEECCCCCCCcCCCc---cccCCCCCceEecccCCCCCcCCccC--CCCCCCCEEEccccCCCCCCc----hhhhc
Q 005120 106 SYLTILDFMWNKISGSIPK---EIGNIKSLELLLLNGNELTGSLPEEL--GYLPKLDRIQIDQNYISGSLP----KSFAN 176 (713)
Q Consensus 106 ~~L~~L~Ls~n~i~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~ 176 (713)
..++.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578888888887632111 12345679999999999999999888 889999999999999987555 45567
Q ss_pred CCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCC--C--CcCCCCCCCCcEEEcccccCCCCCCcc----ccc
Q 005120 177 LNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGY--L--PPELSELPKLLILQLDNNNFEGTTIPA----SYS 248 (713)
Q Consensus 177 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~--~~~l~~l~~L~~L~L~~N~l~~~~~~~----~~~ 248 (713)
+++|++|++++|.+.+..+..|..+++|++|++++|++.+. + +..+..+++|++|++++|+++. ++. .+.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~--l~~~~~~l~~ 221 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET--PTGVCAALAA 221 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC--HHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc--hHHHHHHHHh
Confidence 89999999999999888888999999999999999987642 1 2334788999999999999963 443 257
Q ss_pred CCCCCCEEEccCCCCccCCC-CCCCC---CCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCcccc
Q 005120 249 NMSKLLKLSLRNCSLQGPMP-DLSRI---PNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQ 324 (713)
Q Consensus 249 ~l~~L~~L~L~~N~l~~~~~-~l~~l---~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 324 (713)
.+++|++|+|++|++++..| .+..+ ++|++|+|++|+++ .+|.... ++|+.|+|++|+|++. |. +..+++|+
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~-~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP-AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC-SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc-CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 78999999999999998754 45544 68999999999988 7777643 6888888888888864 32 56777888
Q ss_pred eeecccccCc
Q 005120 325 RLFIANNSLS 334 (713)
Q Consensus 325 ~L~L~~N~l~ 334 (713)
.|++++|+|+
T Consensus 298 ~L~L~~N~l~ 307 (310)
T 4glp_A 298 NLTLDGNPFL 307 (310)
T ss_dssp CEECSSTTTS
T ss_pred EEECcCCCCC
Confidence 8888888776
No 74
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=1e-22 Score=209.04 Aligned_cols=203 Identities=22% Similarity=0.321 Sum_probs=139.7
Q ss_pred CCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEcc
Q 005120 107 YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMN 186 (713)
Q Consensus 107 ~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 186 (713)
.++++++++++++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|.++...+..|.++++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4678888888888 4666554 678888888888887777778888888888888888876666667777888888888
Q ss_pred CCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccC
Q 005120 187 NNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP 266 (713)
Q Consensus 187 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 266 (713)
+|.+++..+..|..+++|++|++++|++++..+..|..+++|++|++++|++++ ..+..+..+++|++|++++|++++.
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCc-cCHhHccCCcccceeEecCCcCcEe
Confidence 887776666666777777777777777776666666666777777777766664 2233355556666666666655554
Q ss_pred CC-CCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCcccceeecccccCccc
Q 005120 267 MP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGS 336 (713)
Q Consensus 267 ~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 336 (713)
.+ .+..+++ |+.|+|++|++++..+..|..+++|+.|++++|++...
T Consensus 173 ~~~~~~~l~~-----------------------L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 173 PEGAFDKLTE-----------------------LKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CTTTTTTCTT-----------------------CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred ChhHhccCCC-----------------------cCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 44 3444444 45555555555544455677778888888888887643
No 75
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.9e-23 Score=214.66 Aligned_cols=202 Identities=17% Similarity=0.244 Sum_probs=181.2
Q ss_pred CcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEE
Q 005120 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (713)
+.+++.|++.++.+.. .+.+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++..+..|..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 4689999999999874 34688999999999999999863 4799999999999999999988888899999999999
Q ss_pred ccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
|++|++++..+..|.++++|++|++++|.+++..+..+..+++|++|++++|++++..+..+..+++|++|++++|++++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 99999998888889999999999999999998888889999999999999999998888888999999999999999997
Q ss_pred CCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCC
Q 005120 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPG 293 (713)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~ 293 (713)
..+..+..+++|++|++++|.+.+. +++|+.|+++.|.++|.+|..
T Consensus 196 -~~~~~~~~l~~L~~L~l~~N~~~~~------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 196 -VPDGVFDRLTSLQYIWLHDNPWDCT------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp -CCTTTTTTCTTCCEEECCSSCBCCC------TTTTHHHHHHHHHTGGGBBCT
T ss_pred -cCHHHHhCCcCCCEEEccCCCcccc------CcHHHHHHHHHHhCCCcccCc
Confidence 5667789999999999999988754 456777888888887777764
No 76
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=7.7e-23 Score=212.07 Aligned_cols=200 Identities=24% Similarity=0.320 Sum_probs=89.8
Q ss_pred ccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCC
Q 005120 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR 181 (713)
Q Consensus 102 ~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 181 (713)
++++++++++++++|+++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 334444555555555554 2333332 3444455555444444444444444444444444444432211 3344444
Q ss_pred EEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCC
Q 005120 182 HFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (713)
Q Consensus 182 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N 261 (713)
+|++++|+++ .+|..+..+++|++|++++|++++..+..|..+++|++|++++|++
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l----------------------- 136 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL----------------------- 136 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCC-----------------------
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCC-----------------------
Confidence 4444444443 2333334444444444444444433333344444444444444444
Q ss_pred CCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc--cCccEEEccCCcCcccCChhccCCcccceeecccccCc
Q 005120 262 SLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (713)
Q Consensus 262 ~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (713)
++.++ .+..+++|+.|+|++|+++ .+|...+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++.
T Consensus 137 --~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 137 --KTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp --CCCCTTTTTTCTTCCEEECTTSCCS-CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred --CccChhhcccccCCCEEECCCCcCC-ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 43333 2334444444444444444 33333222 34455555555554 34445555566667777777665
No 77
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=6.4e-23 Score=208.15 Aligned_cols=187 Identities=19% Similarity=0.238 Sum_probs=123.1
Q ss_pred CCceeecCCCCCCCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCc
Q 005120 66 NWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGS 145 (713)
Q Consensus 66 ~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~ 145 (713)
.|.|..|. ...+.+++++++++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+++.
T Consensus 6 ~~~gC~C~--------~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 74 (251)
T 3m19_A 6 TVTGCTCN--------EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTL 74 (251)
T ss_dssp HHHSSEEE--------GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCC
T ss_pred CCCceEcC--------CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCcc
Confidence 68899994 24567888888777 3555443 5778888888888877777777788888888888887777
Q ss_pred CCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCC
Q 005120 146 LPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSEL 225 (713)
Q Consensus 146 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l 225 (713)
.+..|..+++|++|+|++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|++++..+..+..+
T Consensus 75 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 154 (251)
T 3m19_A 75 SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL 154 (251)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcC
Confidence 77777777777777777777776666666666666666666666665555555555566666665555554444444555
Q ss_pred CCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcc
Q 005120 226 PKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNG 288 (713)
Q Consensus 226 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~ 288 (713)
++|++|+|++|++ ++.++ .+..+++|+.|++++|++++
T Consensus 155 ~~L~~L~L~~N~l-------------------------~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 155 TNLQTLSLSTNQL-------------------------QSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTCCEEECCSSCC-------------------------SCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred cCCCEEECCCCcC-------------------------CccCHHHHhCCCCCCEEEeeCCceeC
Confidence 5555555555554 44444 45555666666666666654
No 78
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.4e-22 Score=210.04 Aligned_cols=200 Identities=25% Similarity=0.213 Sum_probs=170.8
Q ss_pred CcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEE
Q 005120 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (713)
+.+++.+++++++++. +|..+. +++++|+|++|.+++..|..|..+++|++|+|++|.+++..+. ..+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEE
T ss_pred cCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEE
Confidence 4689999999999984 565554 6899999999999988889999999999999999999966443 7899999999
Q ss_pred ccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
|++|+++ .+|..+..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|+++.
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCc
Confidence 9999998 678889999999999999999998888899999999999999999998877788899999999999999985
Q ss_pred CCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCc
Q 005120 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN 287 (713)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~ 287 (713)
..+..|..+++|++|+|++|+++..++.+...++|+.|+|++|++.
T Consensus 163 -l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 163 -LPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp -CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBC
T ss_pred -cCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCcc
Confidence 3344567788888888888888765556666667777777777664
No 79
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=4.9e-23 Score=207.35 Aligned_cols=195 Identities=16% Similarity=0.180 Sum_probs=114.3
Q ss_pred CCCEEECCCCCCCcCCCccccCCCCCceEecccCC-CCCcCCccCCCCCCCCEEEccc-cCCCCCCchhhhcCCCCCEEE
Q 005120 107 YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE-LTGSLPEELGYLPKLDRIQIDQ-NYISGSLPKSFANLNKTRHFH 184 (713)
Q Consensus 107 ~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 184 (713)
+|++|++++|++++..+..|.++++|++|++++|+ ++...+..|..+++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 55666666666665555556666666666666664 5555555566666666666665 666655555566666666666
Q ss_pred ccCCccccccchhcCCCCCcc---EEecccC-CCcCCCCcCCCCCCCCc-EEEcccccCCCCCCcccccCCCCCCEEEcc
Q 005120 185 MNNNSISGQIPPELSRLPSLV---HMLLDNN-NLTGYLPPELSELPKLL-ILQLDNNNFEGTTIPASYSNMSKLLKLSLR 259 (713)
Q Consensus 185 L~~N~l~~~~p~~l~~l~~L~---~L~L~~N-~l~~~~~~~l~~l~~L~-~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~ 259 (713)
+++|.+++ +|. +..+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++ .+|......++|++|+++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~--~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT--SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC--EECTTTTTTCEEEEEECT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc--ccCHhhcCCCCCCEEEcC
Confidence 66666654 333 55555555 6666666 66655555566666666 6666666665 233332222566666666
Q ss_pred CCC-CccCCC-CCCCC-CCccEEEccCCCCcccCCCCccccCccEEEccCC
Q 005120 260 NCS-LQGPMP-DLSRI-PNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNN 307 (713)
Q Consensus 260 ~N~-l~~~~~-~l~~l-~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N 307 (713)
+|+ +++..+ .+..+ ++|+.|++++|+++ .+|.. ...+|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~-~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK-GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT-TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh-HhccCceeeccCc
Confidence 663 665544 45566 66666666666666 45544 2346666666654
No 80
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=8.9e-23 Score=213.92 Aligned_cols=225 Identities=20% Similarity=0.189 Sum_probs=183.9
Q ss_pred cceeEEEcCCCCCccccCc---cccCCCCCCEEECCCCCCCcCCCccc--cCCCCCceEecccCCCCCcCC----ccCCC
Q 005120 82 LHLRELQLLNLNLSGNLSP---EIGRLSYLTILDFMWNKISGSIPKEI--GNIKSLELLLLNGNELTGSLP----EELGY 152 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~---~~~~l~~L~~L~Ls~n~i~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~ 152 (713)
..++.+.+.++.++...-. .+..+++|++|++++|.+.+..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3578888888887643211 12245679999999999999999988 999999999999999997665 44568
Q ss_pred CCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccc--cc--hhcCCCCCccEEecccCCCcCCCCc----CCCC
Q 005120 153 LPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ--IP--PELSRLPSLVHMLLDNNNLTGYLPP----ELSE 224 (713)
Q Consensus 153 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p--~~l~~l~~L~~L~L~~N~l~~~~~~----~l~~ 224 (713)
+++|++|+|++|++.+..+..|..+++|++|++++|++.+. ++ ..+..+++|++|++++|+++. ++. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 99999999999999999899999999999999999998753 22 234789999999999999973 232 2467
Q ss_pred CCCCcEEEcccccCCCCCCcccccCC---CCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccccCccE
Q 005120 225 LPKLLILQLDNNNFEGTTIPASYSNM---SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITT 301 (713)
Q Consensus 225 l~~L~~L~L~~N~l~~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~ 301 (713)
+++|++|+|++|++++ ..|..+..+ ++|++|+|++|+++..+..+. ++|+.|+|++|++++ +|.....++|+.
T Consensus 223 l~~L~~L~Ls~N~l~~-~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~-~~~~~~l~~L~~ 298 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRA-TVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNR-APQPDELPEVDN 298 (310)
T ss_dssp TCCCSSEECTTSCCCC-CCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCS-CCCTTSCCCCSC
T ss_pred CCCCCEEECCCCCCCc-cchhhHHhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCC-CchhhhCCCccE
Confidence 8999999999999997 567777766 699999999999996555554 799999999999995 444333389999
Q ss_pred EEccCCcCcc
Q 005120 302 IKLSNNKLTG 311 (713)
Q Consensus 302 L~Ls~N~l~~ 311 (713)
|+|++|+|+.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999974
No 81
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=2.3e-22 Score=202.37 Aligned_cols=218 Identities=16% Similarity=0.170 Sum_probs=148.4
Q ss_pred CCCCCCC-ce--eecCCC-CCCCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCC-CCcCCCccccCCCCCceE
Q 005120 61 DPCTSNW-TG--VLCFNT-TMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNK-ISGSIPKEIGNIKSLELL 135 (713)
Q Consensus 61 ~~C~~~w-~g--v~C~~~-~~~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~-i~~~~p~~~~~l~~L~~L 135 (713)
+.|.|.+ .+ |.|... .++.-..+++.|++++|++++..+..|.++++|++|++++|+ ++...+..|.++++|++|
T Consensus 6 ~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L 85 (239)
T 2xwt_C 6 PPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHI 85 (239)
T ss_dssp SSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEE
T ss_pred CCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEE
Confidence 3455433 43 447542 122222367777777777776666677777778888888776 776666677777788888
Q ss_pred eccc-CCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCC---EEEccCC-ccccccchhcCCCCCcc-EEec
Q 005120 136 LLNG-NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR---HFHMNNN-SISGQIPPELSRLPSLV-HMLL 209 (713)
Q Consensus 136 ~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~L 209 (713)
++++ |++++..+..|..+++|++|++++|++++ +|. |..+++|+ +|++++| .+++..+..|..+++|+ +|++
T Consensus 86 ~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 86 EIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKL 163 (239)
T ss_dssp EEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEEC
T ss_pred ECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEc
Confidence 8877 77776666777777778888888777775 444 77777777 7788777 77766666677777777 7888
Q ss_pred ccCCCcCCCCcCCCCCCCCcEEEccccc-CCCCCCcccccCC-CCCCEEEccCCCCccCCCCCCCCCCccEEEccCC
Q 005120 210 DNNNLTGYLPPELSELPKLLILQLDNNN-FEGTTIPASYSNM-SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSN 284 (713)
Q Consensus 210 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N 284 (713)
++|+++...+..+.. ++|+.|++++|+ ++. ..+..|..+ ++|++|++++|++++.++. .+++|+.|+++++
T Consensus 164 ~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~-i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 164 YNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTV-IDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CSCCCCEECTTTTTT-CEEEEEECTTCTTCCE-ECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTTC
T ss_pred CCCCCcccCHhhcCC-CCCCEEEcCCCCCccc-CCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccCc
Confidence 777777433333333 777788887774 764 334567777 7778888887777755443 5667777777765
No 82
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=5.5e-22 Score=201.24 Aligned_cols=182 Identities=20% Similarity=0.241 Sum_probs=108.6
Q ss_pred CCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcc
Q 005120 155 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLD 234 (713)
Q Consensus 155 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 234 (713)
+|+.|+|++|.+++..+..|.++++|++|++++|.+++..+..|..+++|++|++++|++++..+..+..+++|++|+++
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 44444444444444444444445555555555555554444455555555555555555555555556666666666666
Q ss_pred cccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc--cCccEEEccCCcCcc
Q 005120 235 NNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTG 311 (713)
Q Consensus 235 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~N~l~~ 311 (713)
+|++++ ..+..|..+++|++|+|++|++++.++ .+..+++|+.|+|++|++++ +|...+. ++|+.|+|++|.+.+
T Consensus 116 ~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 116 GNQLKS-LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQS-VPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp SSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCcCCC-cChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCc-cCHHHHhCCCCCCEEEeeCCceeC
Confidence 666664 334456777778888888888877776 68889999999999999994 4443343 789999999999987
Q ss_pred cCCh------hccCCcccceeecccccCcccCCc
Q 005120 312 TIPS------NFSGLPRLQRLFIANNSLSGSIPS 339 (713)
Q Consensus 312 ~~p~------~~~~l~~L~~L~L~~N~l~~~~p~ 339 (713)
.... ++. -...+..+..++.+.+..+.
T Consensus 194 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 226 (251)
T 3m19_A 194 SRCEILYLSQWIR-ENSNKVKDGTGQNLHESPDG 226 (251)
T ss_dssp TSTTHHHHHHHHH-HSGGGBCC-------CCGGG
T ss_pred CccccHHHHHHHH-hcccceeeccCcccccCCCc
Confidence 6322 221 12233445566666644333
No 83
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=2.6e-24 Score=230.80 Aligned_cols=178 Identities=20% Similarity=0.206 Sum_probs=103.2
Q ss_pred EEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCC----ccccCCC-CCceEecccCCCCCcCCccCCCC-----CCC
Q 005120 87 LQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIP----KEIGNIK-SLELLLLNGNELTGSLPEELGYL-----PKL 156 (713)
Q Consensus 87 L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L 156 (713)
++++.+++++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566677777666666666667777777777776555 5566666 67777777777776655555553 677
Q ss_pred CEEEccccCCCCCCchhhhc----C-CCCCEEEccCCccccccchhc----CC-CCCccEEecccCCCcCCCCcC----C
Q 005120 157 DRIQIDQNYISGSLPKSFAN----L-NKTRHFHMNNNSISGQIPPEL----SR-LPSLVHMLLDNNNLTGYLPPE----L 222 (713)
Q Consensus 157 ~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~p~~l----~~-l~~L~~L~L~~N~l~~~~~~~----l 222 (713)
++|+|++|.+++..+..+.. + ++|++|++++|.+++..+..+ .. .++|++|++++|+++...... +
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 77777777776655554333 3 667777777777665544333 23 246666666666665432222 2
Q ss_pred CCCC-CCcEEEcccccCCCCCCccc----ccCC-CCCCEEEccCCCCcc
Q 005120 223 SELP-KLLILQLDNNNFEGTTIPAS----YSNM-SKLLKLSLRNCSLQG 265 (713)
Q Consensus 223 ~~l~-~L~~L~L~~N~l~~~~~~~~----~~~l-~~L~~L~L~~N~l~~ 265 (713)
..++ +|++|+|++|++++ ..+.. +..+ ++|++|+|++|.+++
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~-~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLAS-KNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HTSCTTCCEEECTTSCGGG-SCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred hcCCccccEeeecCCCCch-hhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 2233 56666666665553 22222 2223 355555555555543
No 84
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.5e-24 Score=229.98 Aligned_cols=212 Identities=16% Similarity=0.190 Sum_probs=161.3
Q ss_pred CCCCCCceeecCCCCCCCCCcceeEEEcCCCCCccccCccccCC--CCCCEEECCCCCCCcCCCccccCCCCCceEeccc
Q 005120 62 PCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRL--SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNG 139 (713)
Q Consensus 62 ~C~~~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~l--~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~ 139 (713)
.|. .|.++.|+. ..++.|+++++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++
T Consensus 35 vc~-~W~~~~~~~-------~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~ 102 (336)
T 2ast_B 35 VCK-RWYRLASDE-------SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSN 102 (336)
T ss_dssp SCH-HHHHHHTCS-------TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTT
T ss_pred HHH-HHHHHhcCc-------hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccC
Confidence 453 688888742 35788999988876 3456666 7899999999998876665 56789999999999
Q ss_pred CCCCCc-CCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCC-ccccc-cchhcCCCCCccEEecccC-CCc
Q 005120 140 NELTGS-LPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN-SISGQ-IPPELSRLPSLVHMLLDNN-NLT 215 (713)
Q Consensus 140 N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~L~L~~N-~l~ 215 (713)
|.+++. +|..+..+++|++|+|++|.+++..+..+..+++|++|++++| .+++. ++..+..+++|++|++++| .++
T Consensus 103 ~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~ 182 (336)
T 2ast_B 103 SVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT 182 (336)
T ss_dssp CEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC
T ss_pred CCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC
Confidence 988765 7777888899999999999888778888888899999999988 57653 5666778888888888888 777
Q ss_pred CC-CCcCCCCCC-CCcEEEcccc--cCCCCCCcccccCCCCCCEEEccCCC-CccCCC-CCCCCCCccEEEccCCC
Q 005120 216 GY-LPPELSELP-KLLILQLDNN--NFEGTTIPASYSNMSKLLKLSLRNCS-LQGPMP-DLSRIPNLGYLDLSSNQ 285 (713)
Q Consensus 216 ~~-~~~~l~~l~-~L~~L~L~~N--~l~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~-~l~~l~~L~~L~Ls~N~ 285 (713)
+. ++..+..++ +|++|++++| .++...++..+..+++|++|++++|. +++..+ .+..+++|+.|++++|.
T Consensus 183 ~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 183 EKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp HHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred hHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 53 455567778 8888888888 44422456667778888888888887 554333 56666777777777774
No 85
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=6.8e-22 Score=210.89 Aligned_cols=244 Identities=18% Similarity=0.208 Sum_probs=151.0
Q ss_pred CCCCCceeecCCCCCCCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCC
Q 005120 63 CTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNEL 142 (713)
Q Consensus 63 C~~~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l 142 (713)
|.|.|..|.|.+ ++++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++
T Consensus 7 C~C~~~~v~C~~-----------------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i 66 (350)
T 4ay9_X 7 CHCSNRVFLCQE-----------------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 66 (350)
T ss_dssp SEEETTEEEEES-----------------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTT
T ss_pred cEeeCCEEEecC-----------------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCC
Confidence 666777788853 3333 344444 25678888888888765556778888888888888887
Q ss_pred CCcCC-ccCCCCCCCCE-EEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEeccc-CCCcCCCC
Q 005120 143 TGSLP-EELGYLPKLDR-IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN-NNLTGYLP 219 (713)
Q Consensus 143 ~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~~ 219 (713)
.+.+| ..|.++++|++ +.+..|+++.+.|+.|.++++|++|++++|++....+..+....++..|++.+ +++....+
T Consensus 67 ~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~ 146 (350)
T 4ay9_X 67 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIER 146 (350)
T ss_dssp CCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECT
T ss_pred CCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccc
Confidence 65444 45777777665 55566777777777777777788887777777766665666666677777654 45554444
Q ss_pred cCCCCCC-CCcEEEcccccCCCCCCcccccCCCCCCEEEccC-CCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc
Q 005120 220 PELSELP-KLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN-CSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS 296 (713)
Q Consensus 220 ~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~ 296 (713)
..|..+. .++.|++++|+|+ .++.......+|++|++++ |.++..++ .|..+++|+.||+++|+|+ .+|... .
T Consensus 147 ~~f~~~~~~l~~L~L~~N~i~--~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~-~ 222 (350)
T 4ay9_X 147 NSFVGLSFESVILWLNKNGIQ--EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYG-L 222 (350)
T ss_dssp TSSTTSBSSCEEEECCSSCCC--EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSS-C
T ss_pred cchhhcchhhhhhcccccccc--CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhh-h
Confidence 4555543 4666777777775 3444444455666666653 44444443 3566666666666666666 555432 2
Q ss_pred cCccEEEccCCcCcccCChhccCCcccceeecccc
Q 005120 297 LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 331 (713)
Q Consensus 297 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 331 (713)
.+|+.|.+.++.--..+| .+..+++|+.+++.++
T Consensus 223 ~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 223 ENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp TTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCH
T ss_pred ccchHhhhccCCCcCcCC-CchhCcChhhCcCCCC
Confidence 355555544443222344 2555566666665443
No 86
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=3.3e-24 Score=229.92 Aligned_cols=254 Identities=15% Similarity=0.150 Sum_probs=169.3
Q ss_pred EEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCC----ccCCCCC-CCCEEEccccCCCCCCchhhhcC-----CC
Q 005120 110 ILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLP----EELGYLP-KLDRIQIDQNYISGSLPKSFANL-----NK 179 (713)
Q Consensus 110 ~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 179 (713)
.+++++|.+++.+|..+...++|++|+|++|.++...+ +.+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46889999998888877777779999999999987766 6777888 89999999999988878777765 89
Q ss_pred CCEEEccCCccccccchhcC----CC-CCccEEecccCCCcCCCCcCCC----C-CCCCcEEEcccccCCCCC---Cccc
Q 005120 180 TRHFHMNNNSISGQIPPELS----RL-PSLVHMLLDNNNLTGYLPPELS----E-LPKLLILQLDNNNFEGTT---IPAS 246 (713)
Q Consensus 180 L~~L~L~~N~l~~~~p~~l~----~l-~~L~~L~L~~N~l~~~~~~~l~----~-l~~L~~L~L~~N~l~~~~---~~~~ 246 (713)
|++|++++|.+++..+..+. .+ ++|++|++++|++++..+..+. . .++|++|++++|++++.. ++..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 99999999998877666443 34 7899999999988866554432 3 258888888888887411 1233
Q ss_pred ccCCC-CCCEEEccCCCCccCCC-----CCCCC-CCccEEEccCCCCccc----CCCCccc--cCccEEEccCCcCcccC
Q 005120 247 YSNMS-KLLKLSLRNCSLQGPMP-----DLSRI-PNLGYLDLSSNQLNGS----IPPGRLS--LNITTIKLSNNKLTGTI 313 (713)
Q Consensus 247 ~~~l~-~L~~L~L~~N~l~~~~~-----~l~~l-~~L~~L~Ls~N~l~~~----ip~~~~~--~~L~~L~Ls~N~l~~~~ 313 (713)
+..++ +|++|+|++|++++..+ .+... ++|+.|+|++|.+++. ++..... ++|+.|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 44554 78888888888776554 22334 4777777777777642 2222111 36777777777776544
Q ss_pred C----hhccCCcccceeecccccCcccCCchhhhhc--cCCCCCccEEEccCCcCC
Q 005120 314 P----SNFSGLPRLQRLFIANNSLSGSIPSSIWQSR--TLNATETFILDFQNNNLT 363 (713)
Q Consensus 314 p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~--~l~~~~L~~L~ls~N~l~ 363 (713)
+ ..+..+++|+.|++++|++.+..+..+.... .-.+++|+.||+++|++.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 3 2335556677777777764432222111110 003444555555555554
No 87
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=2e-24 Score=233.79 Aligned_cols=240 Identities=18% Similarity=0.265 Sum_probs=135.6
Q ss_pred cCccccCCCCCCEEECCCCCCCcCCC----ccccCCCCCceEecccCC---CCCcCCccC-------CCCCCCCEEEccc
Q 005120 98 LSPEIGRLSYLTILDFMWNKISGSIP----KEIGNIKSLELLLLNGNE---LTGSLPEEL-------GYLPKLDRIQIDQ 163 (713)
Q Consensus 98 ~~~~~~~l~~L~~L~Ls~n~i~~~~p----~~~~~l~~L~~L~L~~N~---l~~~~p~~~-------~~l~~L~~L~L~~ 163 (713)
++..+..+++|++|+|++|.++...+ ..+..+++|++|+|++|. +++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 45566777888888888888876533 336678888888888753 444455444 6777888888888
Q ss_pred cCCCC----CCchhhhcCCCCCEEEccCCccccccchhcCC----C---------CCccEEecccCCCcCCCCcCCCCCC
Q 005120 164 NYISG----SLPKSFANLNKTRHFHMNNNSISGQIPPELSR----L---------PSLVHMLLDNNNLTGYLPPELSELP 226 (713)
Q Consensus 164 N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~----l---------~~L~~L~L~~N~l~~~~~~~l~~l~ 226 (713)
|.+.. .+|..+..+++|++|+|++|.++...+..+.. + ++|++|++++|+++
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~----------- 172 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE----------- 172 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT-----------
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC-----------
Confidence 88776 36667777778888888887776443333322 2 55555555555554
Q ss_pred CCcEEEcccccCCCCCCc---ccccCCCCCCEEEccCCCCcc-----CCC-CCCCCCCccEEEccCCCCc----ccCCCC
Q 005120 227 KLLILQLDNNNFEGTTIP---ASYSNMSKLLKLSLRNCSLQG-----PMP-DLSRIPNLGYLDLSSNQLN----GSIPPG 293 (713)
Q Consensus 227 ~L~~L~L~~N~l~~~~~~---~~~~~l~~L~~L~L~~N~l~~-----~~~-~l~~l~~L~~L~Ls~N~l~----~~ip~~ 293 (713)
...++ ..+..+++|++|++++|+++. ..+ .+..+++|+.|+|++|.++ +.+|..
T Consensus 173 -------------~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~ 239 (386)
T 2ca6_A 173 -------------NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239 (386)
T ss_dssp -------------GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred -------------cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH
Confidence 11222 233344444455555444441 122 3444455555555555553 223322
Q ss_pred ccc-cCccEEEccCCcCccc----CChhcc--CCcccceeecccccCcc----cCCchhhhhccCCCCCccEEEccCCcC
Q 005120 294 RLS-LNITTIKLSNNKLTGT----IPSNFS--GLPRLQRLFIANNSLSG----SIPSSIWQSRTLNATETFILDFQNNNL 362 (713)
Q Consensus 294 ~~~-~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~L~L~~N~l~~----~~p~~~~~~~~l~~~~L~~L~ls~N~l 362 (713)
+.. ++|+.|+|++|.|++. ++..+. .+++|+.|+|++|++++ .+|..+.. ++++|+.|++++|++
T Consensus 240 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~----~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDE----KMPDLLFLELNGNRF 315 (386)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHH----HCTTCCEEECTTSBS
T ss_pred HccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHh----cCCCceEEEccCCcC
Confidence 111 4455555555555543 344442 25666666666666665 35555421 345566666666666
Q ss_pred CCc
Q 005120 363 TNI 365 (713)
Q Consensus 363 ~~i 365 (713)
++.
T Consensus 316 ~~~ 318 (386)
T 2ca6_A 316 SEE 318 (386)
T ss_dssp CTT
T ss_pred Ccc
Confidence 544
No 88
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=9.1e-22 Score=193.56 Aligned_cols=180 Identities=20% Similarity=0.206 Sum_probs=86.1
Q ss_pred CCCCCCCceeecCCCCCC----CCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEe
Q 005120 61 DPCTSNWTGVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLL 136 (713)
Q Consensus 61 ~~C~~~w~gv~C~~~~~~----~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~ 136 (713)
+.|.|.|.++.|...... .-..+++.|++++|++++..+..+..+++|++|++++|++++..+..|..+++|++|+
T Consensus 3 ~~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 467778999999654211 1122344555555544443333344445555555555554443333344445555555
Q ss_pred cccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcC
Q 005120 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG 216 (713)
Q Consensus 137 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 216 (713)
|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|++++|.+++..+..+..+++|++|++++|.+.+
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 55554444444444444455555555554444444444444444444444444444333334444444444444444332
Q ss_pred CCCcCCCCCCCCcEEEcccccCCCCCCccccc
Q 005120 217 YLPPELSELPKLLILQLDNNNFEGTTIPASYS 248 (713)
Q Consensus 217 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 248 (713)
.+++|++|+++.|+++| .+|.+++
T Consensus 163 -------~~~~l~~L~~~~n~~~g-~ip~~~~ 186 (208)
T 2o6s_A 163 -------TCPGIRYLSEWINKHSG-VVRNSAG 186 (208)
T ss_dssp -------CTTTTHHHHHHHHHCTT-TBBCTTS
T ss_pred -------CCCCHHHHHHHHHhCCc-eeeccCc
Confidence 22344444444444444 4444443
No 89
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=8.1e-24 Score=229.02 Aligned_cols=234 Identities=18% Similarity=0.254 Sum_probs=171.3
Q ss_pred CcceeEEEcCCCCCccccC----ccccCCCCCCEEECCCC---CCCcCCCccc-------cCCCCCceEecccCCCCC--
Q 005120 81 YLHLRELQLLNLNLSGNLS----PEIGRLSYLTILDFMWN---KISGSIPKEI-------GNIKSLELLLLNGNELTG-- 144 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~----~~~~~l~~L~~L~Ls~n---~i~~~~p~~~-------~~l~~L~~L~L~~N~l~~-- 144 (713)
+++++.|++++|.+++..+ ..+..+++|++|+|++| ++.+.+|..+ ..+++|++|+|++|.++.
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 4679999999999987644 44778999999999996 4555666655 789999999999999997
Q ss_pred --cCCccCCCCCCCCEEEccccCCCCCCchhhh----cC---------CCCCEEEccCCccc-cccc---hhcCCCCCcc
Q 005120 145 --SLPEELGYLPKLDRIQIDQNYISGSLPKSFA----NL---------NKTRHFHMNNNSIS-GQIP---PELSRLPSLV 205 (713)
Q Consensus 145 --~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~p---~~l~~l~~L~ 205 (713)
.+|..+..+++|++|+|++|.++...+..+. .+ ++|++|++++|+++ +.++ ..+..+++|+
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 190 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 190 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcC
Confidence 4777889999999999999999755444444 44 99999999999997 3444 4667788999
Q ss_pred EEecccCCCcC-----CCCcCCCCCCCCcEEEcccccCC----CCCCcccccCCCCCCEEEccCCCCccC----CC-CC-
Q 005120 206 HMLLDNNNLTG-----YLPPELSELPKLLILQLDNNNFE----GTTIPASYSNMSKLLKLSLRNCSLQGP----MP-DL- 270 (713)
Q Consensus 206 ~L~L~~N~l~~-----~~~~~l~~l~~L~~L~L~~N~l~----~~~~~~~~~~l~~L~~L~L~~N~l~~~----~~-~l- 270 (713)
+|++++|+++. ..+..+..+++|+.|+|++|.++ . .+|..+..+++|++|+|++|.+++. .+ .+
T Consensus 191 ~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~ 269 (386)
T 2ca6_A 191 TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSS-ALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFS 269 (386)
T ss_dssp EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHH-HHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHH-HHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHh
Confidence 99999998872 23336677778888888887774 2 3555666666666666666666543 11 11
Q ss_pred -CCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcc----cCChhc-cCCcccceeecccccCcccCC
Q 005120 271 -SRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTG----TIPSNF-SGLPRLQRLFIANNSLSGSIP 338 (713)
Q Consensus 271 -~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~~p 338 (713)
..+ ++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..+
T Consensus 270 ~~~~-----------------------~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 270 KLEN-----------------------IGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp TCSS-----------------------CCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred hccC-----------------------CCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 123 345555555555555 355555 557888888888888886554
No 90
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=2e-21 Score=203.27 Aligned_cols=193 Identities=22% Similarity=0.351 Sum_probs=97.3
Q ss_pred cCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCE
Q 005120 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (713)
Q Consensus 103 ~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 182 (713)
..+++|++|++++|.+.. +| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++. ..+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 345566666666666653 33 35556666666666666654333 55555555555555555532 13444555555
Q ss_pred EEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCC
Q 005120 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCS 262 (713)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 262 (713)
|++++|.+++. + .+..+++|++|++++|++++ ++. +..+++|++|++++|+
T Consensus 112 L~l~~n~l~~~-------------------------~-~l~~l~~L~~L~l~~n~l~~--~~~-l~~l~~L~~L~l~~n~ 162 (308)
T 1h6u_A 112 LDLTSTQITDV-------------------------T-PLAGLSNLQVLYLDLNQITN--ISP-LAGLTNLQYLSIGNAQ 162 (308)
T ss_dssp EECTTSCCCCC-------------------------G-GGTTCTTCCEEECCSSCCCC--CGG-GGGCTTCCEEECCSSC
T ss_pred EECCCCCCCCc-------------------------h-hhcCCCCCCEEECCCCccCc--Ccc-ccCCCCccEEEccCCc
Confidence 55555544432 1 14444444444444444442 121 4445555555555555
Q ss_pred CccCCCCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCcccceeecccccCc
Q 005120 263 LQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (713)
Q Consensus 263 l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (713)
+++..+ +..+++|+.|++++|.+++ ++.....++|+.|+|++|++++.. .+..+++|+.|++++|+++
T Consensus 163 l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 163 VSDLTP-LANLSKLTTLKADDNKISD-ISPLASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCCCGG-GTTCTTCCEEECCSSCCCC-CGGGGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred CCCChh-hcCCCCCCEEECCCCccCc-ChhhcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 544333 4455555555555555542 222111144555555555555433 2556666666666666665
No 91
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=3.1e-23 Score=219.80 Aligned_cols=250 Identities=18% Similarity=0.228 Sum_probs=187.3
Q ss_pred CCCCEEECCCCCCCcCCCccccCC--CCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCC-CchhhhcCCCCCE
Q 005120 106 SYLTILDFMWNKISGSIPKEIGNI--KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGS-LPKSFANLNKTRH 182 (713)
Q Consensus 106 ~~L~~L~Ls~n~i~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~ 182 (713)
..++.+++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. ++..+..+++|++
T Consensus 47 ~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 47 SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 34789999999887 5667777 8999999999999987766 56799999999999999866 8888999999999
Q ss_pred EEccCCccccccchhcCCCCCccEEecccC-CCcCC-CCcCCCCCCCCcEEEcccc-cCCCCCCcccccCCC-CCCEEEc
Q 005120 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNN-NLTGY-LPPELSELPKLLILQLDNN-NFEGTTIPASYSNMS-KLLKLSL 258 (713)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~-~~~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~~l~-~L~~L~L 258 (713)
|++++|.+++..+..++.+++|++|++++| .+++. ++..+..+++|++|++++| .+++..++..+..++ +|++|++
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 999999999888889999999999999999 67752 5556778899999999999 887523567788888 9999999
Q ss_pred cCC--CCc-cCCC-CCCCCCCccEEEccCCC-CcccCCCCccc-cCccEEEccCCc-CcccCChhccCCcccceeecccc
Q 005120 259 RNC--SLQ-GPMP-DLSRIPNLGYLDLSSNQ-LNGSIPPGRLS-LNITTIKLSNNK-LTGTIPSNFSGLPRLQRLFIANN 331 (713)
Q Consensus 259 ~~N--~l~-~~~~-~l~~l~~L~~L~Ls~N~-l~~~ip~~~~~-~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N 331 (713)
++| .++ +..+ .+..+++|+.|++++|. +++..+..... ++|+.|++++|. +.......+..+++|+.|++++|
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 998 444 2222 45567888888888888 65444443222 678888888884 33222235677788888888877
Q ss_pred cCcccCCchhhhhccCCCCCccEEEccCCcCCCcCC
Q 005120 332 SLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG 367 (713)
Q Consensus 332 ~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~ 367 (713)
++...-..+. ..+..|++++|+++++.+
T Consensus 283 -i~~~~~~~l~-------~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 283 -VPDGTLQLLK-------EALPHLQINCSHFTTIAR 310 (336)
T ss_dssp -SCTTCHHHHH-------HHSTTSEESCCCSCCTTC
T ss_pred -cCHHHHHHHH-------hhCcceEEecccCccccC
Confidence 3322111111 224455677777776543
No 92
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=4.2e-21 Score=204.74 Aligned_cols=239 Identities=18% Similarity=0.188 Sum_probs=138.0
Q ss_pred CEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCc-hhhhcCCCCCE-EEcc
Q 005120 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLP-KSFANLNKTRH-FHMN 186 (713)
Q Consensus 109 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~ 186 (713)
++++.++++++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+| ..|.++++++. +.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 46777788877 566655 3577888888888876666677888888888888887765444 45667766654 4555
Q ss_pred CCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEccc-ccCCCCCCcccccCCCCCCEEEccCCCCcc
Q 005120 187 NNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDN-NNFEGTTIPASYSNMSKLLKLSLRNCSLQG 265 (713)
Q Consensus 187 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 265 (713)
.|+++...|..|..+++|++|++++|+++...+..+....++..|++.+ |++.. ..+..|..+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~-l~~~~f~~~~-------------- 153 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHT-IERNSFVGLS-------------- 153 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCE-ECTTSSTTSB--------------
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccc-ccccchhhcc--------------
Confidence 6777766666677777777777777777655555555555566666544 33332 1112232222
Q ss_pred CCCCCCCCCCccEEEccCCCCcccCCCCccc-cCccEEEccC-CcCcccCChhccCCcccceeecccccCcccCCchhhh
Q 005120 266 PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSN-NKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 343 (713)
Q Consensus 266 ~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 343 (713)
..++.|++++|+|+ .+|...+. .+|+.|++++ |.++...+..|..+++|+.|+|++|+|+ .+|...
T Consensus 154 --------~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~-- 221 (350)
T 4ay9_X 154 --------FESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYG-- 221 (350)
T ss_dssp --------SSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSS--
T ss_pred --------hhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhh--
Confidence 23455555555555 34443333 4555555543 4444443445666666666666666666 444432
Q ss_pred hccCCCCCccEEEccC-CcCCCcCCCCCCCCceEEEecCC
Q 005120 344 SRTLNATETFILDFQN-NNLTNISGSFNIPPNVTVRLRGN 382 (713)
Q Consensus 344 ~~~l~~~~L~~L~ls~-N~l~~i~~~~~~~~l~~l~l~~N 382 (713)
+.+|+.|.+.+ ++++.++.-..+++++.+++..+
T Consensus 222 -----~~~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 222 -----LENLKKLRARSTYNLKKLPTLEKLVALMEASLTYP 256 (350)
T ss_dssp -----CTTCCEEECTTCTTCCCCCCTTTCCSCCEEECSCH
T ss_pred -----hccchHhhhccCCCcCcCCCchhCcChhhCcCCCC
Confidence 23334444332 34555554334666666766544
No 93
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=3.8e-21 Score=201.16 Aligned_cols=191 Identities=21% Similarity=0.370 Sum_probs=158.6
Q ss_pred CcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEE
Q 005120 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (713)
+.+++.|++.++.+.. ++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++. +.+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEE
Confidence 5789999999999975 34 68899999999999999996544 99999999999999999864 4689999999999
Q ss_pred ccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
|++|++++. + .+..+++|++|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++++
T Consensus 114 l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 999999975 3 38999999999999999986644 8888999999999999885433 7888888999998888875
Q ss_pred CCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCc
Q 005120 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN 287 (713)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~ 287 (713)
++. +..+++|++|++++|++++..+ +..+++|+.|++++|+++
T Consensus 188 --~~~-l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 188 --ISP-LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp --CGG-GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEE
T ss_pred --Chh-hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeee
Confidence 333 7778888888888888876553 666777777777777765
No 94
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=3e-20 Score=182.68 Aligned_cols=179 Identities=18% Similarity=0.241 Sum_probs=96.3
Q ss_pred CEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 005120 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (713)
Q Consensus 109 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (713)
+.++++++.++ .+|..+ .++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45666666666 344333 346666666666666555555666666666666666666555555555566666666666
Q ss_pred ccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCC
Q 005120 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP 268 (713)
Q Consensus 189 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 268 (713)
.+++..+..|..+++|++|++++|++++..+..+.. +++|++|++++|++++.++
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-------------------------l~~L~~L~l~~N~l~~~~~ 141 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDK-------------------------LTQLKDLRLYQNQLKSVPD 141 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-------------------------CTTCCEEECCSSCCSCCCT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhcc-------------------------CCcCCEEECCCCccceeCH
Confidence 555444444455555555555555555433333444 4444444444444444333
Q ss_pred -CCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccCChhccCCc
Q 005120 269 -DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (713)
Q Consensus 269 -~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (713)
.+..+++|+.|++++|.+.+..| +|+.|+++.|+++|.+|..++.++
T Consensus 142 ~~~~~l~~L~~L~l~~N~~~~~~~------~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 142 GVFDRLTSLQYIWLHDNPWDCTCP------GIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp TTTTTCTTCCEEECCSCCBCCCTT------TTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred HHhccCCCccEEEecCCCeecCCC------CHHHHHHHHHhCCceeeccCcccc
Confidence 24445555555555555543222 345555555555555555554443
No 95
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=8.6e-21 Score=213.36 Aligned_cols=216 Identities=29% Similarity=0.373 Sum_probs=138.6
Q ss_pred CCCCC-CCCCCC---CCcee-ecCCCCCCCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCC
Q 005120 55 SNWNR-GDPCTS---NWTGV-LCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNI 129 (713)
Q Consensus 55 ~~w~~-~~~C~~---~w~gv-~C~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l 129 (713)
.+|.. .++|.. .|.|+ .|.. .+++.|++++|++++ +|..+. ++|++|+|++|+|+ .+| ..+
T Consensus 34 ~~W~~~~~~~~~~~~~~~~l~~C~~-------~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l 99 (571)
T 3cvr_A 34 DKWEKQALPGENRNEAVSLLKECLI-------NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELP 99 (571)
T ss_dssp HHHHTTCCTTCCHHHHHHHHHHHHH-------TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCC
T ss_pred HHHhccCCccccccchhhhcccccc-------CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---ccc
Confidence 34532 367743 48888 6842 378889999888886 666553 78888888888888 566 456
Q ss_pred CCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEec
Q 005120 130 KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 209 (713)
Q Consensus 130 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 209 (713)
++|++|+|++|++++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|++++|.|++ +|. .+++|++|++
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 167 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSV 167 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEEC
Confidence 888888888888886 555 554 78888888887776 444 56677777777777765 343 4556666666
Q ss_pred ccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCccc
Q 005120 210 DNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGS 289 (713)
Q Consensus 210 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ 289 (713)
++|++++ +|. +. ++|+.|+|++|+|+ .+|. +.. +| ....+.|+.|+|++|+|+ .
T Consensus 168 s~N~L~~-lp~-l~--~~L~~L~Ls~N~L~--~lp~-~~~--~L----------------~~~~~~L~~L~Ls~N~l~-~ 221 (571)
T 3cvr_A 168 RNNQLTF-LPE-LP--ESLEALDVSTNLLE--SLPA-VPV--RN----------------HHSEETEIFFRCRENRIT-H 221 (571)
T ss_dssp CSSCCSC-CCC-CC--TTCCEEECCSSCCS--SCCC-CC--------------------------CCEEEECCSSCCC-C
T ss_pred CCCCCCC-cch-hh--CCCCEEECcCCCCC--chhh-HHH--hh----------------hcccccceEEecCCCcce-e
Confidence 6666664 444 43 56666666666665 2333 221 22 011122377777777776 5
Q ss_pred CCCCccc-cCccEEEccCCcCcccCChhccCCcc
Q 005120 290 IPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPR 322 (713)
Q Consensus 290 ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~ 322 (713)
+|...+. ++|+.|+|++|.|++.+|..+..++.
T Consensus 222 lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 222 IPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 6665444 67777777777777777777665443
No 96
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=2.7e-20 Score=209.25 Aligned_cols=188 Identities=32% Similarity=0.420 Sum_probs=122.3
Q ss_pred CCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecc
Q 005120 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (713)
Q Consensus 131 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 210 (713)
+|++|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|++++|.|++ +|. +.. +|++|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 45555555555543 333221 44555555555555 233 234555555555555554 344 433 66666666
Q ss_pred cCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccC
Q 005120 211 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSI 290 (713)
Q Consensus 211 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~i 290 (713)
+|++++ +|. .+++|+.|++++|+|++ +|. .+++|++|+|++|++++.++ +. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~--lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM--LPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC--CCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc--CCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCC-ch
Confidence 666665 443 45677777777777764 444 46677777777777776444 44 78888888888888 67
Q ss_pred CCCccccCc-------cEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhc
Q 005120 291 PPGRLSLNI-------TTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSR 345 (713)
Q Consensus 291 p~~~~~~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 345 (713)
|. +..+| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+.
T Consensus 196 p~--~~~~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 196 PA--VPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CC--CC--------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred hh--HHHhhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 76 33367 99999999999 5788888899999999999999999999887543
No 97
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=2.4e-19 Score=177.80 Aligned_cols=160 Identities=21% Similarity=0.234 Sum_probs=116.8
Q ss_pred CCCCCCCceeecCCCCCCCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccC
Q 005120 61 DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGN 140 (713)
Q Consensus 61 ~~C~~~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N 140 (713)
..|.|.|..+.|. +++++ .+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 7 ~~C~C~~~~v~c~-----------------~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N 66 (220)
T 2v9t_B 7 AACTCSNNIVDCR-----------------GKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNN 66 (220)
T ss_dssp TTSEEETTEEECT-----------------TSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSS
T ss_pred CCCEECCCEEEcC-----------------CCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCC
Confidence 3465566666664 34444 2344443 57888888888888777777888888888888888
Q ss_pred CCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCc
Q 005120 141 ELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPP 220 (713)
Q Consensus 141 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 220 (713)
++++..|+.|..+++|++|+|++|+|+...+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|++++..+.
T Consensus 67 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 67 QISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH
Confidence 88877788888888888888888888866666677777888888888877777777777777777777777777766666
Q ss_pred CCCCCCCCcEEEcccccCCC
Q 005120 221 ELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 221 ~l~~l~~L~~L~L~~N~l~~ 240 (713)
.+..+++|+.|++++|.+..
T Consensus 147 ~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 147 TFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTTCTTCCEEECCSSCEEC
T ss_pred HHhCCCCCCEEEeCCCCcCC
Confidence 67777777777777776653
No 98
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=3.7e-19 Score=177.67 Aligned_cols=161 Identities=22% Similarity=0.278 Sum_probs=120.4
Q ss_pred CCCCCCCCCCCceeecCCCCCCCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEe
Q 005120 57 WNRGDPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLL 136 (713)
Q Consensus 57 w~~~~~C~~~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~ 136 (713)
|...+.| .|++|.|... +++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+
T Consensus 13 ~~~~~~C--s~~~v~c~~~-----------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 70 (229)
T 3e6j_A 13 CPSQCSC--SGTTVDCRSK-----------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELY 70 (229)
T ss_dssp CCTTCEE--ETTEEECTTS-----------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEE--eCCEeEccCC-----------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEE
Confidence 3344566 6999999543 222 3343332 7788888888888887788888888888888
Q ss_pred cccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcC
Q 005120 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG 216 (713)
Q Consensus 137 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 216 (713)
|++|+++...+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+++ .+|..+..+++|++|++++|++++
T Consensus 71 L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 149 (229)
T 3e6j_A 71 LGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKS 149 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCC
T ss_pred CCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCc
Confidence 8888887766677788888888888888888777777778888888888888877 556677777777777777777776
Q ss_pred CCCcCCCCCCCCcEEEcccccCCC
Q 005120 217 YLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 217 ~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
..+..+..+++|+.|++++|.+.+
T Consensus 150 ~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 150 IPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCHHHHhCCCCCCEEEeeCCCccC
Confidence 666667777777777777777764
No 99
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.80 E-value=1.5e-21 Score=223.45 Aligned_cols=297 Identities=11% Similarity=0.090 Sum_probs=148.5
Q ss_pred CcceeEEEcCCCCCccc----cCccccCCCCCCEEECCCCCCCc----CCCccccCCCCCceEecccCCCCCcCCccCCC
Q 005120 81 YLHLRELQLLNLNLSGN----LSPEIGRLSYLTILDFMWNKISG----SIPKEIGNIKSLELLLLNGNELTGSLPEELGY 152 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~----~~~~~~~l~~L~~L~Ls~n~i~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 152 (713)
+++|+.|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+.++++|++|+|++|.+.+ +|..+..
T Consensus 163 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 163 CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 46788888888887654 33345667888888888888863 334445677888888888887764 4455666
Q ss_pred CCCCCEEEccccCCC--------------------------CCCchhhhcCCCCCEEEccCCccccccc-hhcCCCCCcc
Q 005120 153 LPKLDRIQIDQNYIS--------------------------GSLPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLV 205 (713)
Q Consensus 153 l~~L~~L~L~~N~l~--------------------------~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~ 205 (713)
+++|++|+++..... ..+|..+..+++|++|++++|.+++... ..+..+++|+
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~ 321 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLE 321 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCC
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCC
Confidence 666666666532211 2334444445555555555555433222 2234455555
Q ss_pred EEecccCCCcC-CCCcCCCCCCCCcEEEcc-----------cccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCC-
Q 005120 206 HMLLDNNNLTG-YLPPELSELPKLLILQLD-----------NNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLS- 271 (713)
Q Consensus 206 ~L~L~~N~l~~-~~~~~l~~l~~L~~L~L~-----------~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~- 271 (713)
+|+++ +.+.. .++.....+++|++|+++ .|.+++..++.....+++|++|+++.|++++..+ .+.
T Consensus 322 ~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~ 400 (592)
T 3ogk_B 322 VLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGT 400 (592)
T ss_dssp EEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHH
T ss_pred EEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHh
Confidence 55555 22221 111122334555555555 2333321122223345555555555555544322 222
Q ss_pred CCCCccEEEcc----CCCCccc-----CCCCcc-ccCccEEEccCCc--CcccCChhcc-CCcccceeecccccCcccC-
Q 005120 272 RIPNLGYLDLS----SNQLNGS-----IPPGRL-SLNITTIKLSNNK--LTGTIPSNFS-GLPRLQRLFIANNSLSGSI- 337 (713)
Q Consensus 272 ~l~~L~~L~Ls----~N~l~~~-----ip~~~~-~~~L~~L~Ls~N~--l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~- 337 (713)
.+++|+.|+++ .|.+++. ++.... .++|+.|++++|. +++..+..+. .+++|+.|++++|++++..
T Consensus 401 ~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 480 (592)
T 3ogk_B 401 YLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGL 480 (592)
T ss_dssp HCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHH
T ss_pred hCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHH
Confidence 24555555554 4444421 000000 1455555555322 4443333332 2555666666666555422
Q ss_pred CchhhhhccCCCCCccEEEccCCcCCCc--CCCC-CCCCceEEEecCCCC
Q 005120 338 PSSIWQSRTLNATETFILDFQNNNLTNI--SGSF-NIPPNVTVRLRGNPF 384 (713)
Q Consensus 338 p~~~~~~~~l~~~~L~~L~ls~N~l~~i--~~~~-~~~~l~~l~l~~N~~ 384 (713)
+..+. .+++|+.|++++|.|++. +... .+++++.|++++|++
T Consensus 481 ~~~~~-----~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 481 MEFSR-----GCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRA 525 (592)
T ss_dssp HHHHT-----CCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBC
T ss_pred HHHHh-----cCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcC
Confidence 22222 345566666666665432 1111 245555666666654
No 100
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=5.1e-19 Score=175.47 Aligned_cols=152 Identities=18% Similarity=0.201 Sum_probs=122.5
Q ss_pred EEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCC-ccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEcccc
Q 005120 86 ELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIP-KEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (713)
Q Consensus 86 ~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 164 (713)
.++++++.++. +|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|.+++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 55556666664 555543 456899999999987754 45788999999999999998888888888899999999999
Q ss_pred CCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
++++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|++++|.+.+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 8888888888888888888888888888778888888888888888888887777778888888888888887765
No 101
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.79 E-value=1.2e-21 Score=224.21 Aligned_cols=244 Identities=13% Similarity=0.031 Sum_probs=151.0
Q ss_pred ceeEEEcCCCC-Ccc-ccCccccCCCCCCEEECCCCCCCcC----CCccccCCCCCceEecccCCCCC----cCCccCCC
Q 005120 83 HLRELQLLNLN-LSG-NLSPEIGRLSYLTILDFMWNKISGS----IPKEIGNIKSLELLLLNGNELTG----SLPEELGY 152 (713)
Q Consensus 83 ~l~~L~l~~~~-l~~-~~~~~~~~l~~L~~L~Ls~n~i~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~ 152 (713)
+++.|++.++. ++. .++..+..+++|++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+..
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 39999999886 221 1223345789999999999998765 33455778999999999999973 34445667
Q ss_pred CCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccc---cccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCc
Q 005120 153 LPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSIS---GQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLL 229 (713)
Q Consensus 153 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 229 (713)
+++|++|+|++|.+.+ +|..+.++++|++|+++.+... ...+..+..+++|+.|+++++.. ..+|..+..+++|+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIR 296 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCc
Confidence 8999999999999885 7788999999999999864322 22334556666777777766433 24555566667777
Q ss_pred EEEcccccCCCCCCcccccCCCCCCEEEccCCCCcc-CCC-CCCCCCCccEEEccC-----------CCCcccCCCCc--
Q 005120 230 ILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG-PMP-DLSRIPNLGYLDLSS-----------NQLNGSIPPGR-- 294 (713)
Q Consensus 230 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~l~~l~~L~~L~Ls~-----------N~l~~~ip~~~-- 294 (713)
+|++++|.+++..++..+..+++|++|+++ +.+.. ..+ ....+++|+.|++++ |.+++......
T Consensus 297 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~ 375 (592)
T 3ogk_B 297 KLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQ 375 (592)
T ss_dssp EEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHH
T ss_pred EEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHh
Confidence 777777765542222334566666666666 22221 111 123345566666652 33332100000
Q ss_pred cccCccEEEccCCcCcccCChhccC-Ccccceeecc
Q 005120 295 LSLNITTIKLSNNKLTGTIPSNFSG-LPRLQRLFIA 329 (713)
Q Consensus 295 ~~~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~ 329 (713)
..++|++|+++.|++++..+..+.. +++|+.|+++
T Consensus 376 ~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~ 411 (592)
T 3ogk_B 376 GCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV 411 (592)
T ss_dssp HCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEE
T ss_pred hCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEe
Confidence 0145555555555555444444433 4555555553
No 102
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=7.4e-19 Score=182.16 Aligned_cols=148 Identities=29% Similarity=0.403 Sum_probs=67.5
Q ss_pred CCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEE
Q 005120 104 RLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (713)
Q Consensus 104 ~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 183 (713)
.+++|++|++++|.+... + .+..+++|++|+|++|++++..+ +..+++|++|+|++|.+++
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~--------------- 104 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD--------------- 104 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC---------------
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC---------------
Confidence 344555555555555422 2 24444555555555554443322 4444444444444444442
Q ss_pred EccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCC
Q 005120 184 HMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (713)
Q Consensus 184 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 263 (713)
. ..+..+++|++|++++|++++. +.+..+++|+.|++++|++++ + ..+..+++|++|++++|++
T Consensus 105 ---------~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~--~-~~l~~l~~L~~L~L~~N~l 168 (291)
T 1h6t_A 105 ---------L--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD--I-TVLSRLTKLDTLSLEDNQI 168 (291)
T ss_dssp ---------G--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCC--C-GGGGGCTTCSEEECCSSCC
T ss_pred ---------C--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCc--c-hhhccCCCCCEEEccCCcc
Confidence 1 1244444444444444444432 234444555555555555543 1 3444455555555555555
Q ss_pred ccCCCCCCCCCCccEEEccCCCCc
Q 005120 264 QGPMPDLSRIPNLGYLDLSSNQLN 287 (713)
Q Consensus 264 ~~~~~~l~~l~~L~~L~Ls~N~l~ 287 (713)
++..+ +..+++|+.|++++|.++
T Consensus 169 ~~~~~-l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 169 SDIVP-LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp CCCGG-GTTCTTCCEEECCSSCCC
T ss_pred ccchh-hcCCCccCEEECCCCcCC
Confidence 44333 444444444444444443
No 103
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.8e-18 Score=171.59 Aligned_cols=151 Identities=21% Similarity=0.320 Sum_probs=95.9
Q ss_pred CEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 005120 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (713)
Q Consensus 109 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (713)
+.++++++.++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 56778888877 4565543 57778888888777766667777777777777777777666777777777777777777
Q ss_pred ccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCC
Q 005120 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (713)
Q Consensus 189 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 263 (713)
.|+...+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++ ..+..+..+++|++|+|++|.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT-IAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCE-ECHHHHhCCCCCCEEEeCCCCc
Confidence 7765555555666666666666666665555555555555555555555553 2233344444444444444433
No 104
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=8.5e-19 Score=187.67 Aligned_cols=151 Identities=22% Similarity=0.301 Sum_probs=100.9
Q ss_pred EEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCcccc-CCCCCceEecccCCCCCcCCccCCCCCCCCEEEcccc
Q 005120 86 ELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIG-NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (713)
Q Consensus 86 ~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 164 (713)
.+++++++++. +|..+. +.++.|+|++|+|++..+..|. ++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 45555666653 454443 3577888888888776666666 7788888888888887777777777777777777777
Q ss_pred CCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCC---CCCCCCcEEEcccccCC
Q 005120 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPEL---SELPKLLILQLDNNNFE 239 (713)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l---~~l~~L~~L~L~~N~l~ 239 (713)
+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+...+..+ ..+++|+.|+|++|+|+
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 7776666667777777777777777776666666666777777777776664333333 34555555555555554
No 105
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=2.2e-18 Score=170.90 Aligned_cols=151 Identities=23% Similarity=0.295 Sum_probs=93.1
Q ss_pred CEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCC-ccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 005120 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLP-EELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (713)
Q Consensus 109 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (713)
+++++++|.++ .+|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 47788888877 3565543 345777777777776644 3466677777777777777766666666666677777666
Q ss_pred CccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCC
Q 005120 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (713)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 263 (713)
|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++ ..|..|..+++|++|+|++|.+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITT-VAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCC-BCTTTTTTCTTCCEEECCSCCE
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCE-ECHHHhcCCCCCCEEEecCcCC
Confidence 66666666666666666666666666665555555555555555555555554 3344444444444444444443
No 106
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.7e-18 Score=179.45 Aligned_cols=170 Identities=25% Similarity=0.341 Sum_probs=132.5
Q ss_pred CcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEE
Q 005120 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (713)
+.+++.|+++++.+... +.+..+++|++|+|++|++++..+ +.++++|++|+|++|.+++. +.+..+++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEEE
Confidence 46899999999999754 358899999999999999997554 99999999999999999863 3489999999999
Q ss_pred ccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
|++|++++. ..+..+++|++|++++|.+++. ..+..+++|++|++++|++++..+ +..+++|+.|++++|.+++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 999999864 4688888899999998888765 466777777777777777775433 6667777777777777653
Q ss_pred CCCcccccCCCCCCEEEccCCCCcc
Q 005120 241 TTIPASYSNMSKLLKLSLRNCSLQG 265 (713)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~ 265 (713)
++ .+..+++|+.|++++|+++.
T Consensus 193 --l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 193 --LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp --CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred --Ch-hhccCCCCCEEECcCCcccC
Confidence 33 35556666666666655543
No 107
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=9.3e-19 Score=187.34 Aligned_cols=153 Identities=21% Similarity=0.265 Sum_probs=121.0
Q ss_pred CEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCC-CCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 005120 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELG-YLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (713)
Q Consensus 109 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (713)
+++++++++++ .+|..+. +.+++|+|++|++++..+..|. .+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57999999998 4676554 4589999999999988888887 899999999999999988888899999999999999
Q ss_pred CccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCccc-c---cCCCCCCEEEccCCCC
Q 005120 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPAS-Y---SNMSKLLKLSLRNCSL 263 (713)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-~---~~l~~L~~L~L~~N~l 263 (713)
|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+. +|.. | ..+++|+.|+|++|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~--l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR--FPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS--CCGGGTC----CTTCCEEECCSSCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe--eCHHHhcCcccCCcCCEEECCCCCC
Confidence 99987777788888888888888888887777788888888888888888874 4433 3 3455555555555555
Q ss_pred ccC
Q 005120 264 QGP 266 (713)
Q Consensus 264 ~~~ 266 (713)
+..
T Consensus 176 ~~l 178 (361)
T 2xot_A 176 KKL 178 (361)
T ss_dssp CCC
T ss_pred Ccc
Confidence 543
No 108
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=2.1e-18 Score=196.04 Aligned_cols=189 Identities=27% Similarity=0.372 Sum_probs=118.2
Q ss_pred ceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEcc
Q 005120 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (713)
Q Consensus 83 ~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 162 (713)
.+..+.+..+.+.+..+ +..+++|+.|++++|.+.. +| .+..+++|++|+|++|.+++..| +..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 34445555555554332 4566677777777777763 33 46777777777777777775544 6677777777777
Q ss_pred ccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCC
Q 005120 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (713)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 242 (713)
+|.+.+. | .+..+++|+.|+|++|.+.+. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++ .
T Consensus 96 ~N~l~~l-~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~-~ 168 (605)
T 1m9s_A 96 ENKIKDL-S-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD-I 168 (605)
T ss_dssp SSCCCCC-T-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC-C
T ss_pred CCCCCCC-h-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC-c
Confidence 7777642 2 566667777777777776643 3466666666666666666643 456666666666666666664 2
Q ss_pred CcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCc
Q 005120 243 IPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN 287 (713)
Q Consensus 243 ~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~ 287 (713)
.| +..+++|+.|+|++|++++. +.+..+++|+.|+|++|+++
T Consensus 169 ~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEE
T ss_pred hh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCc
Confidence 22 66666666666666666653 44556666666666666665
No 109
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=8.1e-18 Score=167.91 Aligned_cols=153 Identities=20% Similarity=0.285 Sum_probs=91.2
Q ss_pred CEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 005120 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (713)
Q Consensus 109 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (713)
+.++++++.++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+|....+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 55777777776 4555443 66777777777777666666666667777776666666555555555666666666666
Q ss_pred ccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCC
Q 005120 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP 268 (713)
Q Consensus 189 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 268 (713)
++++..+..|..+++|++|++++|+++ .+|..+..+++|++|+|++|++++..+
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~--------------------------~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT--------------------------ELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC--------------------------SCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred cCCccChhHhCcchhhCeEeccCCccc--------------------------ccCcccccCCCCCEEECCCCcCCccCH
Confidence 555444444444555555555555444 344445555555555555555555444
Q ss_pred -CCCCCCCccEEEccCCCCcccC
Q 005120 269 -DLSRIPNLGYLDLSSNQLNGSI 290 (713)
Q Consensus 269 -~l~~l~~L~~L~Ls~N~l~~~i 290 (713)
.+..+++|+.|++++|.+.+..
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTTB
T ss_pred HHHhCCCCCCEEEeeCCCccCCc
Confidence 4556667777777777766433
No 110
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=3.6e-18 Score=194.08 Aligned_cols=174 Identities=25% Similarity=0.320 Sum_probs=154.2
Q ss_pred CCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEE
Q 005120 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (713)
Q Consensus 80 ~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 159 (713)
.+.+|+.|+++++.+... +.+..+++|+.|+|++|++.+..| +..+++|++|+|++|.+++. | .+..+++|++|
T Consensus 41 ~L~~L~~L~l~~n~i~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL-S-SLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCCCC--TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-T-TSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCCCC--hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-h-hhccCCCCCEE
Confidence 356899999999998753 368999999999999999997655 99999999999999999863 3 79999999999
Q ss_pred EccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCC
Q 005120 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (713)
Q Consensus 160 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 239 (713)
+|++|.+.+. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|+|+
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 9999999964 4689999999999999999976 678999999999999999997665 899999999999999998
Q ss_pred CCCCcccccCCCCCCEEEccCCCCccCCC
Q 005120 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMP 268 (713)
Q Consensus 240 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 268 (713)
+ + ..+..+++|+.|+|++|++.+.+.
T Consensus 189 ~--l-~~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 189 D--L-RALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp B--C-GGGTTCTTCSEEECCSEEEECCCC
T ss_pred C--C-hHHccCCCCCEEEccCCcCcCCcc
Confidence 5 3 468999999999999999987544
No 111
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=7.3e-20 Score=213.13 Aligned_cols=188 Identities=19% Similarity=0.201 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHhCCCCC-CCCCCCCCC-CCCCCCCceeecCCCCCCCCCcceeEEEcCCCCCccccCccccCCCCCCEEE
Q 005120 35 IEVSALRSIKKSLVDDY-SKLSNWNRG-DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILD 112 (713)
Q Consensus 35 ~~~~~l~~~~~~~~~~~-~~l~~w~~~-~~C~~~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~ 112 (713)
.++++|..+.+.+.... ..-..|... .++. .|.++.++. ++++.|+|.++++... +.. .|+.++
T Consensus 132 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~-------~~~~~l~L~~n~~~~~-~~~-----~l~~l~ 197 (727)
T 4b8c_D 132 CTKQALMEMADTLTDSKTAKKQQPTGDSTPSG-TATNSAVST-------PLTPKIELFANGKDEA-NQA-----LLQHKK 197 (727)
T ss_dssp CCCHHHHHHHHHHHHHHTTC------------------------------------------------------------
T ss_pred cchhhhhhhhhhcccccCcccCCCcCCCCccc-cCCCceecC-------CccceEEeeCCCCCcc-hhh-----HhhcCc
Confidence 34567888877654221 122356433 3332 588877743 5788899988888752 222 244455
Q ss_pred CCCCCCCc---------CCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEE
Q 005120 113 FMWNKISG---------SIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (713)
Q Consensus 113 Ls~n~i~~---------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 183 (713)
|+.|.|.+ ..|..|..++.|++|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|.++++|++|
T Consensus 198 Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 275 (727)
T 4b8c_D 198 LSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVL 275 (727)
T ss_dssp ------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEE
T ss_pred cCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEE
Confidence 55555442 23444555555555555555554 33444444555555555555554 444445555555555
Q ss_pred EccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 184 HMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 184 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
+|++|.|+ .+|..|..+++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++
T Consensus 276 ~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 276 DLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp ECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCS
T ss_pred eCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCC
Confidence 55555544 33444444445555555555444 334444444444444444444443
No 112
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=1.1e-17 Score=162.90 Aligned_cols=150 Identities=21% Similarity=0.261 Sum_probs=73.9
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEc
Q 005120 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (713)
.+++.|++++|.++ .++ .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..+..+..+++|++|++
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 45555566555555 233 4555555555555555443 2234555555555555555555545555555555555555
Q ss_pred cccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccC
Q 005120 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNF 238 (713)
Q Consensus 162 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 238 (713)
++|++++..+..+..+++|++|++++|.+.+.+| .+..+++|++|++++|++++. + .+..+++|++|++++|++
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 5555554445555555555555555554111222 344444444444444444431 1 334444444444444444
No 113
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=1.5e-18 Score=177.08 Aligned_cols=149 Identities=22% Similarity=0.386 Sum_probs=74.0
Q ss_pred ccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCcc
Q 005120 126 IGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV 205 (713)
Q Consensus 126 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 205 (713)
+..+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +.++++|++|++++|++++. |. +.. ++|+
T Consensus 37 ~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l-~~-~~~-~~L~ 109 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNL-NG-IPS-ACLS 109 (263)
T ss_dssp HHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCC-TT-CCC-SSCC
T ss_pred hhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCc-Cc-ccc-Cccc
Confidence 3444444444444444442 22 34444444444444444443322 44444455555555544432 11 111 5555
Q ss_pred EEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCC
Q 005120 206 HMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQ 285 (713)
Q Consensus 206 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~ 285 (713)
+|++++|++++. +.+..+++|+.|++++|++++ ++ .+..+++|++|++++|++++. +.+..+++|+.|++++|+
T Consensus 110 ~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~--~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 110 RLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS--IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp EEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB--CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEE
T ss_pred EEEccCCccCCC--hhhcCcccccEEECCCCcCCC--Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCc
Confidence 555555555532 235555556666666665553 22 455566666666666666554 445556666666666666
Q ss_pred Cc
Q 005120 286 LN 287 (713)
Q Consensus 286 l~ 287 (713)
++
T Consensus 184 ~~ 185 (263)
T 1xeu_A 184 CV 185 (263)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 114
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=1e-17 Score=162.99 Aligned_cols=153 Identities=16% Similarity=0.244 Sum_probs=110.6
Q ss_pred cCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCE
Q 005120 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (713)
Q Consensus 103 ~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 182 (713)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..|..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 56677888888888887 455 5788888888888888665 2346777888888888888887767777888888888
Q ss_pred EEccCCccccccchhcCCCCCccEEecccCC-CcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCC
Q 005120 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNN-LTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (713)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N 261 (713)
|++++|.+++..+..+..+++|++|++++|+ ++ .++ .+..+++|++|++++|++++ ++ .+..+++|++|++++|
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~--~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD--YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC--CT-TGGGCSSCCEEEECBC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC--hH-HhccCCCCCEEEeeCc
Confidence 8888888877777777778888888888877 54 344 46677777777777777764 23 5566666666666666
Q ss_pred CCc
Q 005120 262 SLQ 264 (713)
Q Consensus 262 ~l~ 264 (713)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 654
No 115
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=9.4e-18 Score=171.12 Aligned_cols=171 Identities=19% Similarity=0.224 Sum_probs=144.7
Q ss_pred CcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEE
Q 005120 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (713)
+.+++.+++.++.+++.. .+..+++|++|++++|+++. +| .+..+++|++|+|++|++++..+ +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 456777888888887543 57889999999999999984 55 68999999999999999997655 89999999999
Q ss_pred ccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
|++|++++. |. +.. ++|++|++++|++++. +.+..+++|++|++++|++++. + .+..+++|++|++++|++++
T Consensus 92 L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 999999864 33 233 8999999999999864 3689999999999999999865 3 68899999999999999986
Q ss_pred CCCcccccCCCCCCEEEccCCCCccCC
Q 005120 241 TTIPASYSNMSKLLKLSLRNCSLQGPM 267 (713)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~~~ 267 (713)
. ..+..+++|+.|++++|++++.+
T Consensus 165 ~---~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 165 T---GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp C---TTSTTCCCCCEEEEEEEEEECCC
T ss_pred h---HHhccCCCCCEEeCCCCcccCCc
Confidence 2 67889999999999999998664
No 116
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.71 E-value=2.4e-20 Score=210.71 Aligned_cols=220 Identities=15% Similarity=0.089 Sum_probs=115.6
Q ss_pred cCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCE
Q 005120 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (713)
Q Consensus 103 ~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 182 (713)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|......|. .+..+.+.+..|..+.++++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhccc
Confidence 34555666666666665 4566666666666666644431000000 00111244566667777777777
Q ss_pred EE-ccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCC
Q 005120 183 FH-MNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (713)
Q Consensus 183 L~-L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N 261 (713)
|+ ++.|.+. +|..+.+.+|.++...+ ..|+.|+|++|+|++ +|. +..+++|+.|+|++|
T Consensus 414 L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~--lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 414 VDPMRAAYLD-----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV--LCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp HCGGGHHHHH-----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS--CCC-GGGGTTCCEEECCSS
T ss_pred Ccchhhcccc-----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC--CcC-ccccccCcEeecCcc
Confidence 76 5555432 23333344444432111 124555555555543 343 555555555555555
Q ss_pred CCccCCCCCCCCCCccEEEccCCCCcccCCCCccccCccEEEccCCcCcccC-ChhccCCcccceeecccccCcccCCch
Q 005120 262 SLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTI-PSNFSGLPRLQRLFIANNSLSGSIPSS 340 (713)
Q Consensus 262 ~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~ 340 (713)
+++..+..+..+++|+.|+|++|.+++ +|.....++|+.|+|++|+|++.+ |..|..+++|+.|+|++|+|++..|..
T Consensus 474 ~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 474 RLRALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp CCCCCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred cccccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 555332345555555555555555553 442111256666666666666665 777888888888888888887654422
Q ss_pred hhhhccCCCCCccEEEc
Q 005120 341 IWQSRTLNATETFILDF 357 (713)
Q Consensus 341 ~~~~~~l~~~~L~~L~l 357 (713)
..... .+++|+.||+
T Consensus 553 -~~l~~-~lp~L~~L~l 567 (567)
T 1dce_A 553 -ERLAE-MLPSVSSILT 567 (567)
T ss_dssp -THHHH-HCTTCSEEEC
T ss_pred -HHHHH-HCcccCccCC
Confidence 11100 3567777764
No 117
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.71 E-value=8.1e-20 Score=209.00 Aligned_cols=200 Identities=16% Similarity=0.169 Sum_probs=126.1
Q ss_pred CcceeEEEcCCCCCccccCcccc-CCCCCCEEECCCC-CCCcC-CCccccCCCCCceEecccCCCCCcCCccC----CCC
Q 005120 81 YLHLRELQLLNLNLSGNLSPEIG-RLSYLTILDFMWN-KISGS-IPKEIGNIKSLELLLLNGNELTGSLPEEL----GYL 153 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~-~l~~L~~L~Ls~n-~i~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l 153 (713)
+++++.|+++++.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 46789999999988877666665 6889999999988 45432 34444578999999999998776544333 467
Q ss_pred CCCCEEEccccC--CCC-CCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCC-----------------
Q 005120 154 PKLDRIQIDQNY--ISG-SLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNN----------------- 213 (713)
Q Consensus 154 ~~L~~L~L~~N~--l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~----------------- 213 (713)
++|++|++++|. +.. .++..+.++++|++|++++|...+.++..+..+++|++|++..+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 789999999886 221 122233456889999998883222356666666777777654431
Q ss_pred ---------CcCC----CCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccC-CC-CCCCCCCccE
Q 005120 214 ---------LTGY----LPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP-MP-DLSRIPNLGY 278 (713)
Q Consensus 214 ---------l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~l~~l~~L~~ 278 (713)
+... ++..+..+++|+.|++++|.+++..+...+..+++|++|++++| +... .+ ....+++|+.
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 1111 12222245778888888887654223333556777777777776 3211 11 1123456666
Q ss_pred EEc
Q 005120 279 LDL 281 (713)
Q Consensus 279 L~L 281 (713)
|++
T Consensus 343 L~L 345 (594)
T 2p1m_B 343 LRV 345 (594)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 118
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.69 E-value=1.8e-19 Score=203.51 Aligned_cols=201 Identities=20% Similarity=0.239 Sum_probs=158.3
Q ss_pred CCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCc-------------cccccchhcCCCCCccEEe-cccCCCcC
Q 005120 151 GYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS-------------ISGQIPPELSRLPSLVHML-LDNNNLTG 216 (713)
Q Consensus 151 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~l~~l~~L~~L~-L~~N~l~~ 216 (713)
..+++|+.|+|++|+++ .+|+.++++++|+.|++++|. +.+..|..++.+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 55677777888888776 667778888888888876664 4455666667777777776 555543
Q ss_pred CCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccc
Q 005120 217 YLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS 296 (713)
Q Consensus 217 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~ 296 (713)
.+|+.+.+++|.++. ++. ..|+.|+|++|++++.+ .+..+++|+.|+|++|.++ .+|..+..
T Consensus 423 ---------~~L~~l~l~~n~i~~--l~~-----~~L~~L~Ls~n~l~~lp-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLK--MEY-----ADVRVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHH--HHH-----TTCSEEECTTSCCSSCC-CGGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhcccccc--cCc-----cCceEEEecCCCCCCCc-CccccccCcEeecCccccc-ccchhhhc
Confidence 345566677777653 222 25999999999999854 5899999999999999999 88876444
Q ss_pred -cCccEEEccCCcCcccCChhccCCcccceeecccccCcccC-CchhhhhccCCCCCccEEEccCCcCCCcCCCCC----
Q 005120 297 -LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI-PSSIWQSRTLNATETFILDFQNNNLTNISGSFN---- 370 (713)
Q Consensus 297 -~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~---- 370 (713)
++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..+. .+++|+.|+|++|+|+++++...
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~-----~l~~L~~L~L~~N~l~~~~~~~~~l~~ 557 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLV-----SCPRLVLLNLQGNSLCQEEGIQERLAE 557 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGG-----GCTTCCEEECTTSGGGGSSSCTTHHHH
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHh-----cCCCCCEEEecCCcCCCCccHHHHHHH
Confidence 899999999999997 56 8999999999999999999876 99888 78899999999999999876542
Q ss_pred -CCCceEEEe
Q 005120 371 -IPPNVTVRL 379 (713)
Q Consensus 371 -~~~l~~l~l 379 (713)
+|+++.|++
T Consensus 558 ~lp~L~~L~l 567 (567)
T 1dce_A 558 MLPSVSSILT 567 (567)
T ss_dssp HCTTCSEEEC
T ss_pred HCcccCccCC
Confidence 677777753
No 119
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.68 E-value=6.5e-18 Score=196.70 Aligned_cols=185 Identities=17% Similarity=0.195 Sum_probs=76.8
Q ss_pred CCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEc
Q 005120 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHM 185 (713)
Q Consensus 106 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 185 (713)
+.++.|+|.+|.+.. .+..+ |+.++|+.|.+.+ +++..|.+. ..++.|..+++|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~-----l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQAL-----LQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCc-chhhH-----hhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEEC
Confidence 457778888888774 33332 4445555554432 223333333 34555555556666666
Q ss_pred cCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCcc
Q 005120 186 NNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 265 (713)
Q Consensus 186 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 265 (713)
++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|+ .+|..++.+++|++|+|++|.|+.
T Consensus 232 s~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~ 307 (727)
T 4b8c_D 232 SNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT--SLPAELGSCFQLKYFYFFDNMVTT 307 (727)
T ss_dssp TTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS--SCCSSGGGGTTCSEEECCSSCCCC
T ss_pred CCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC--ccChhhcCCCCCCEEECCCCCCCc
Confidence 666555 34444445566666666666665 55555666666666666666665 346666666666666666666654
Q ss_pred CCCCCCCCCCccEEEccCCCCcccCCCCccc--cCccEEEccCCcCcccCCh
Q 005120 266 PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPS 315 (713)
Q Consensus 266 ~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~N~l~~~~p~ 315 (713)
.+..+..+++|+.|+|++|.|++.+|..+.. .....|+|++|.+++.+|.
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 4335666666666666666666555443222 1122345555555555543
No 120
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.68 E-value=4.2e-19 Score=203.04 Aligned_cols=298 Identities=16% Similarity=0.137 Sum_probs=171.0
Q ss_pred CcceeEEEcCCC-CCccc-cCccccCCCCCCEEECCCCCCCcCCCcccc----CCCCCceEecccCC--CCCc-CCccCC
Q 005120 81 YLHLRELQLLNL-NLSGN-LSPEIGRLSYLTILDFMWNKISGSIPKEIG----NIKSLELLLLNGNE--LTGS-LPEELG 151 (713)
Q Consensus 81 ~~~l~~L~l~~~-~l~~~-~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~----~l~~L~~L~L~~N~--l~~~-~p~~~~ 151 (713)
+++++.|++.+| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. ++.. ++..+.
T Consensus 129 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~ 208 (594)
T 2p1m_B 129 FKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVT 208 (594)
T ss_dssp CTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHH
T ss_pred CCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHH
Confidence 578999999988 55443 334445789999999999988765554443 66799999999887 2211 111224
Q ss_pred CCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCc--------------------------cc----cccchhcCCC
Q 005120 152 YLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS--------------------------IS----GQIPPELSRL 201 (713)
Q Consensus 152 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~--------------------------l~----~~~p~~l~~l 201 (713)
.+++|++|+|++|...+.++..+..+++|++|+++.+. +. ..++..+..+
T Consensus 209 ~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~ 288 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVC 288 (594)
T ss_dssp HCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHH
T ss_pred hCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhh
Confidence 46889999998883222366667777777777754441 11 1122233356
Q ss_pred CCccEEecccCCCcCCCC-cCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccC---------CCCccCCC-CC
Q 005120 202 PSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN---------CSLQGPMP-DL 270 (713)
Q Consensus 202 ~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~---------N~l~~~~~-~l 270 (713)
++|++|++++|.+++... ..+..+++|+.|++++| +....++.....+++|++|++.+ +.+++... .+
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l 367 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHH
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHH
Confidence 788888888887654322 22456778888888877 43212233334567777777733 33332111 11
Q ss_pred -CCCCCccEEEccCCCCcccCCCCcc--ccCccEEEcc--C----CcCcccC-----ChhccCCcccceeecccccCccc
Q 005120 271 -SRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLS--N----NKLTGTI-----PSNFSGLPRLQRLFIANNSLSGS 336 (713)
Q Consensus 271 -~~l~~L~~L~Ls~N~l~~~ip~~~~--~~~L~~L~Ls--~----N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~ 336 (713)
..+++|+.|+++.|.+++....... .++|+.|+++ + |.++... +..+..+++|+.|++++ .+++.
T Consensus 368 ~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~ 446 (594)
T 2p1m_B 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDK 446 (594)
T ss_dssp HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHH
T ss_pred HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHH
Confidence 2356666776666666543222211 1466677766 3 4444211 12244556666666655 55544
Q ss_pred CCchhhhhccCCCCCccEEEccCCcCCCcCC-CC--CCCCceEEEecCCCC
Q 005120 337 IPSSIWQSRTLNATETFILDFQNNNLTNISG-SF--NIPPNVTVRLRGNPF 384 (713)
Q Consensus 337 ~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~-~~--~~~~l~~l~l~~N~~ 384 (713)
.+..+.. .+++|+.|++++|.+++... .+ .+++++.|++++|++
T Consensus 447 ~~~~l~~----~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 447 VFEYIGT----YAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHH----HCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHH----hchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 4444432 24556666666666653211 11 145666666666665
No 121
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.68 E-value=4.7e-17 Score=170.75 Aligned_cols=89 Identities=30% Similarity=0.570 Sum_probs=79.7
Q ss_pred cCcccccccccCCcEEEEEEEec------CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
++|...+.||+|+||.||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..||
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35666788999999999999874 377899999987766667789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
|||||++|+|.++|+
T Consensus 121 V~Ey~~~G~L~~~l~ 135 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLR 135 (329)
T ss_dssp EEECCTTCBHHHHHH
T ss_pred EEEcCCCCcHHHHHH
Confidence 999999999999986
No 122
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.68 E-value=3.9e-17 Score=168.98 Aligned_cols=89 Identities=31% Similarity=0.581 Sum_probs=78.0
Q ss_pred cCcccccccccCCcEEEEEEEec------CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
++|...+.||+|+||.||+|++. +|..||||+++.......++|.+|+++|++++|||||+++|+|.+++..||
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45677789999999999999864 367899999987766667789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
|||||++|+|.++|+
T Consensus 93 V~Ey~~~G~L~~~l~ 107 (299)
T 4asz_A 93 VFEYMKHGDLNKFLR 107 (299)
T ss_dssp EEECCTTCBHHHHHH
T ss_pred EEEcCCCCcHHHHHH
Confidence 999999999999985
No 123
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=2.7e-16 Score=148.71 Aligned_cols=133 Identities=23% Similarity=0.241 Sum_probs=102.4
Q ss_pred CCCCCEEECCCCCCC-cCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEE
Q 005120 105 LSYLTILDFMWNKIS-GSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (713)
Q Consensus 105 l~~L~~L~Ls~n~i~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 183 (713)
.++|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 467888888888887 67777788888888888888888865 678888888888888888887778888788888888
Q ss_pred EccCCcccccc-chhcCCCCCccEEecccCCCcCCCC---cCCCCCCCCcEEEcccccCC
Q 005120 184 HMNNNSISGQI-PPELSRLPSLVHMLLDNNNLTGYLP---PELSELPKLLILQLDNNNFE 239 (713)
Q Consensus 184 ~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~~---~~l~~l~~L~~L~L~~N~l~ 239 (713)
++++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888887642 2567777777777777777775444 35666777777777777665
No 124
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=3.5e-16 Score=151.43 Aligned_cols=129 Identities=22% Similarity=0.279 Sum_probs=78.6
Q ss_pred eEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCc-cccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccc
Q 005120 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPK-EIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ 163 (713)
Q Consensus 85 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 163 (713)
+.+++++++++ .+|..+.. +|++|++++|++++..+. .|..+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56677777764 34544432 667777777776655443 366666666666666666666666666666666666666
Q ss_pred cCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcC
Q 005120 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG 216 (713)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 216 (713)
|+|++..+..|.++++|++|++++|++++..|..|..+++|++|++++|.+++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 66665555555566666666666666655555555555555555555555543
No 125
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=5e-16 Score=150.39 Aligned_cols=129 Identities=26% Similarity=0.394 Sum_probs=95.7
Q ss_pred CEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCc-cCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 005120 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPE-ELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (713)
Q Consensus 109 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (713)
+++++++|+++ .+|..+.. +|++|+|++|++++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67777777775 56655543 777777777777766554 367777777777777777777777777777777777777
Q ss_pred CccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
|+|++..+..|..+++|++|+|++|++++..|..+..+++|++|++++|.+++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 77777777777777777777777777777777777777777777777777765
No 126
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=5.4e-16 Score=148.01 Aligned_cols=136 Identities=20% Similarity=0.259 Sum_probs=88.8
Q ss_pred CCCCCCCceeecCCCCCCCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccC
Q 005120 61 DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGN 140 (713)
Q Consensus 61 ~~C~~~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N 140 (713)
+.|.|.|.++.|... +++. +|..+ .++|++|++++|++++..+..|..+++|++|+|++|
T Consensus 3 ~~C~C~~~~l~~~~~-----------------~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 62 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSK-----------------GLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQN 62 (177)
T ss_dssp TTCEEETTEEECCSS-----------------CCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSS
T ss_pred CCCEeCCCEEEecCC-----------------CCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCC
Confidence 457677888888542 2321 23222 256777777777777666666677777777777777
Q ss_pred CCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcC
Q 005120 141 ELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG 216 (713)
Q Consensus 141 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 216 (713)
.+++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|.+.+
T Consensus 63 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 63 QIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 7776666666777777777777777776666666666667777766666665544445556666666666666554
No 127
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.65 E-value=1.5e-16 Score=165.29 Aligned_cols=87 Identities=29% Similarity=0.497 Sum_probs=74.9
Q ss_pred cccccccccCCcEEEEEEEec------CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 626 FNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
+...+.||+|+||.||+|.+. +++.||||+++.... ...++|.+|+.+|++++|||||+++|+|.+.+..+||
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 445678999999999999973 467899999975433 3357899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
||||++|+|.++|+
T Consensus 108 ~Ey~~~G~L~~~L~ 121 (308)
T 4gt4_A 108 FSYCSHGDLHEFLV 121 (308)
T ss_dssp EECCSSCBHHHHHH
T ss_pred EEcCCCCcHHHHHH
Confidence 99999999999985
No 128
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=5.2e-16 Score=146.72 Aligned_cols=137 Identities=18% Similarity=0.205 Sum_probs=123.5
Q ss_pred CcceeEEEcCCCCCc-cccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEE
Q 005120 81 YLHLRELQLLNLNLS-GNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 159 (713)
..+++.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 368999999999998 78888899999999999999999976 779999999999999999998888888889999999
Q ss_pred EccccCCCCCC-chhhhcCCCCCEEEccCCccccccc---hhcCCCCCccEEecccCCCcCCCCc
Q 005120 160 QIDQNYISGSL-PKSFANLNKTRHFHMNNNSISGQIP---PELSRLPSLVHMLLDNNNLTGYLPP 220 (713)
Q Consensus 160 ~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~N~l~~~~~~ 220 (713)
+|++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.. +|+
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~-~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE-APD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB-CCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh-ccc
Confidence 99999999753 3789999999999999999997665 589999999999999999873 444
No 129
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=4.6e-16 Score=143.93 Aligned_cols=127 Identities=23% Similarity=0.235 Sum_probs=74.0
Q ss_pred CCCCEEECCCCCCC-cCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEE
Q 005120 106 SYLTILDFMWNKIS-GSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFH 184 (713)
Q Consensus 106 ~~L~~L~Ls~n~i~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 184 (713)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666665 45555566666666666666666644 5566666666666666666655666666666666666
Q ss_pred ccCCccccc-cchhcCCCCCccEEecccCCCcCCCC---cCCCCCCCCcEEEcc
Q 005120 185 MNNNSISGQ-IPPELSRLPSLVHMLLDNNNLTGYLP---PELSELPKLLILQLD 234 (713)
Q Consensus 185 L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~~---~~l~~l~~L~~L~L~ 234 (713)
+++|.+++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666543 23455555555555555555554333 234444555555443
No 130
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=2.3e-15 Score=145.75 Aligned_cols=126 Identities=24% Similarity=0.308 Sum_probs=89.6
Q ss_pred EEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccC
Q 005120 86 ELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY 165 (713)
Q Consensus 86 ~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 165 (713)
.+++++++++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|.+++..+..|..+++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4455555555 3444432 57888888888887 566778888888888888888887777777778888888888887
Q ss_pred CCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCc
Q 005120 166 ISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT 215 (713)
Q Consensus 166 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 215 (713)
|++..|..|.++++|++|+|++|.|+...+..|..+++|++|++++|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 77777777777777777777777777655555666666666666666665
No 131
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=3.5e-15 Score=144.43 Aligned_cols=128 Identities=24% Similarity=0.340 Sum_probs=95.6
Q ss_pred CEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 005120 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (713)
Q Consensus 109 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (713)
+++++++|+++ .+|..+. ++|++|+|++|+++ .+|..|..+++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 57888888887 5665543 57888888888887 56677778888888888888888777777777788888888888
Q ss_pred ccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 189 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
+|++..+..|..+++|++|+|++|+++...+..|..+++|+.|++++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 7777777777777777777777777776555566677777777777776653
No 132
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=8.7e-16 Score=142.05 Aligned_cols=129 Identities=18% Similarity=0.210 Sum_probs=117.6
Q ss_pred CcceeEEEcCCCCCc-cccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEE
Q 005120 81 YLHLRELQLLNLNLS-GNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 159 (713)
..+++.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 468999999999998 78898999999999999999999976 779999999999999999998888888889999999
Q ss_pred EccccCCCCC-CchhhhcCCCCCEEEccCCccccccc---hhcCCCCCccEEeccc
Q 005120 160 QIDQNYISGS-LPKSFANLNKTRHFHMNNNSISGQIP---PELSRLPSLVHMLLDN 211 (713)
Q Consensus 160 ~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~ 211 (713)
++++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|++|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999974 45889999999999999999997766 5788999999999864
No 133
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=9.2e-15 Score=139.37 Aligned_cols=130 Identities=22% Similarity=0.244 Sum_probs=100.6
Q ss_pred CCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 005120 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (713)
Q Consensus 108 L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (713)
.+.+++++|+++ .+|..+ .++|++|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467888888887 455444 36888888888888877777778888888888888888877777778888888888888
Q ss_pred CccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
|.+++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+.+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 88887766667778888888888888876555556777777777777777765
No 134
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=3.9e-16 Score=164.68 Aligned_cols=278 Identities=14% Similarity=0.159 Sum_probs=146.6
Q ss_pred CcceeEEEcCCCCCccccCccccC-CCCCCEEECCCCCCC--cCCCccccCCCCCceEecccCCCCCcCCccCCC-----
Q 005120 81 YLHLRELQLLNLNLSGNLSPEIGR-LSYLTILDFMWNKIS--GSIPKEIGNIKSLELLLLNGNELTGSLPEELGY----- 152 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~-l~~L~~L~Ls~n~i~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----- 152 (713)
..+++.|+++++ +...-...+.. +++|++|||++|+|. ...+ +.++.++.+.+..|. +.+..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~---~~~~~~~~~~~~~~~---I~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKA---GTYPNGKFYIYMANF---VPAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESS---SSSGGGCCEEECTTE---ECTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcc---ccccccccccccccc---cCHHHhccccccc
Confidence 356777777653 21111122333 777888888888877 2222 222334555555553 33455666
Q ss_pred ---CCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCC----CcCCCCcCCCCC
Q 005120 153 ---LPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNN----LTGYLPPELSEL 225 (713)
Q Consensus 153 ---l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~----l~~~~~~~l~~l 225 (713)
+++|+.|+|.+ .++.+.+..|.++++|+.|++++|.+....+..|..+.++..+.+..+. ........|.++
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 88888888887 7776777778888888888888888776777777777777766665522 122223334444
Q ss_pred CCCc-EEEcccccCCCCCCcccc----cCCCCCCEEEccCCCCccCCCCC-CCCCCccEEEccCCCCcccCCCCccc--c
Q 005120 226 PKLL-ILQLDNNNFEGTTIPASY----SNMSKLLKLSLRNCSLQGPMPDL-SRIPNLGYLDLSSNQLNGSIPPGRLS--L 297 (713)
Q Consensus 226 ~~L~-~L~L~~N~l~~~~~~~~~----~~l~~L~~L~L~~N~l~~~~~~l-~~l~~L~~L~Ls~N~l~~~ip~~~~~--~ 297 (713)
..|+ .+.+.... .++..+ ....+++.+.+.++-.......+ ..+++|+.+++++|+++ .||...|. .
T Consensus 176 ~~L~~~i~~~~~~----~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~ 250 (329)
T 3sb4_A 176 EPLETTIQVGAMG----KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKK 250 (329)
T ss_dssp CCCEEEEEECTTC----CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCT
T ss_pred cccceeEEecCCC----cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCC
Confidence 4554 33332211 111110 11233334433332111000000 12455556666655555 45554444 4
Q ss_pred CccEEEccCCcCcccCChhccCCcccc-eeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCC-C-CCCc
Q 005120 298 NITTIKLSNNKLTGTIPSNFSGLPRLQ-RLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-N-IPPN 374 (713)
Q Consensus 298 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~-~-~~~l 374 (713)
+|+.|+|.+| ++...+.+|.++++|+ .+++.+ .++..-+..|. .+++|+.+++++|+++.|+... . .+++
T Consensus 251 ~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~-----~c~~L~~l~l~~n~i~~I~~~aF~~~~~L 323 (329)
T 3sb4_A 251 YLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFM-----GCDNLRYVLATGDKITTLGDELFGNGVPS 323 (329)
T ss_dssp TCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTT-----TCTTEEEEEECSSCCCEECTTTTCTTCCC
T ss_pred CCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhh-----CCccCCEEEeCCCccCccchhhhcCCcch
Confidence 5666666555 5545555566666666 666655 45433334444 5566666666666666665432 2 4555
Q ss_pred eEEE
Q 005120 375 VTVR 378 (713)
Q Consensus 375 ~~l~ 378 (713)
+.++
T Consensus 324 ~~ly 327 (329)
T 3sb4_A 324 KLIY 327 (329)
T ss_dssp CEEE
T ss_pred hhhc
Confidence 5554
No 135
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.56 E-value=1.1e-15 Score=161.37 Aligned_cols=260 Identities=13% Similarity=0.110 Sum_probs=170.0
Q ss_pred CcceeEEEcCCCCCc--cccCccccCCCCCCEEECCCCCCCcCCCccccC--------CCCCceEecccCCCCCcCCccC
Q 005120 81 YLHLRELQLLNLNLS--GNLSPEIGRLSYLTILDFMWNKISGSIPKEIGN--------IKSLELLLLNGNELTGSLPEEL 150 (713)
Q Consensus 81 ~~~l~~L~l~~~~l~--~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~--------l~~L~~L~L~~N~l~~~~p~~~ 150 (713)
+.+|+.|||++|.+. ...... ++.++.+.+..|.| .+.+|.+ +++|+.|+|.+ .++.+.+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCcccc---cccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 468999999999987 222222 22355666666633 2455667 99999999998 8887888889
Q ss_pred CCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCcc----ccccchhcCCCCCcc-EEecccCCC-cCCCCcCCCC
Q 005120 151 GYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSI----SGQIPPELSRLPSLV-HMLLDNNNL-TGYLPPELSE 224 (713)
Q Consensus 151 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~~~~p~~l~~l~~L~-~L~L~~N~l-~~~~~~~l~~ 224 (713)
.++++|+.|++++|.+..+.+..|.++.++..+.+..+.. .......|..+..|+ .+.+....- .......-..
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 9999999999999999888888898888888777666332 222233455555665 333332210 0000011112
Q ss_pred CCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc--cCcc-
Q 005120 225 LPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNIT- 300 (713)
Q Consensus 225 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~- 300 (713)
..+++.+.+.++-... ........+++|+.|+|++|+++...+ .|.++++|+.+++.+| ++ .|+...|. .+|+
T Consensus 201 ~~~~~~l~~~~~l~~~-~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~ 277 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNA-DFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAG 277 (329)
T ss_dssp GGGCSEEEEEECCCHH-HHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCE
T ss_pred ccccceEEEeeeecHH-HHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccE
Confidence 4556666665542210 111111236788888888888776666 6778888888888887 55 56666665 5687
Q ss_pred EEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEE
Q 005120 301 TIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILD 356 (713)
Q Consensus 301 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ 356 (713)
.+++.+ .++...+.+|.++++|+.|++++|+++..-+..|. ++++|+.+.
T Consensus 278 ~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~-----~~~~L~~ly 327 (329)
T 3sb4_A 278 TLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFG-----NGVPSKLIY 327 (329)
T ss_dssp EEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTC-----TTCCCCEEE
T ss_pred EEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhc-----CCcchhhhc
Confidence 888877 67766777888888888888888888754445555 566777665
No 136
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.56 E-value=5.6e-15 Score=155.20 Aligned_cols=89 Identities=21% Similarity=0.404 Sum_probs=73.2
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
++|...+.||+|+||.||+|.. .+|+.||||++..... ...+.|.+|+++|++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4688889999999999999985 4689999999976433 234579999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
||++|+|.++|+
T Consensus 104 y~~gg~L~~~i~ 115 (350)
T 4b9d_A 104 YCEGGDLFKRIN 115 (350)
T ss_dssp CCTTCBHHHHHH
T ss_pred CCCCCcHHHHHH
Confidence 999999999984
No 137
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.56 E-value=3.6e-15 Score=154.32 Aligned_cols=88 Identities=27% Similarity=0.432 Sum_probs=74.5
Q ss_pred hhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
..+++...+.||+|+||.||+|++.+ .||||+++... ....++|.+|+++|++++|||||+++|+|.+ +..||||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 34567778899999999999998743 69999987543 2334679999999999999999999999864 5689999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
|||++|+|.++|+
T Consensus 111 Ey~~gGsL~~~l~ 123 (307)
T 3omv_A 111 QWCEGSSLYKHLH 123 (307)
T ss_dssp ECCSSCBHHHHHH
T ss_pred EcCCCCCHHHHHh
Confidence 9999999999985
No 138
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.55 E-value=4.5e-15 Score=155.70 Aligned_cols=89 Identities=25% Similarity=0.397 Sum_probs=79.0
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecC
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (713)
..|+..+.||+|+||.||+|... +|+.||||+++.......+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 34777788999999999999864 58999999997655445567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhh
Q 005120 703 SNGTLRDQLS 712 (713)
Q Consensus 703 ~~GsL~~~L~ 712 (713)
++|+|.++++
T Consensus 154 ~gg~L~~~l~ 163 (346)
T 4fih_A 154 EGGALTDIVT 163 (346)
T ss_dssp TTEEHHHHHH
T ss_pred CCCcHHHHHH
Confidence 9999999875
No 139
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.54 E-value=1e-14 Score=156.96 Aligned_cols=89 Identities=25% Similarity=0.397 Sum_probs=80.2
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecC
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (713)
+.|...+.||+|+||.||+|... +|+.||||++........+.+.+|+.+|++++|||||++++++...+..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 45778889999999999999864 58999999998765555567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhh
Q 005120 703 SNGTLRDQLS 712 (713)
Q Consensus 703 ~~GsL~~~L~ 712 (713)
++|+|.++++
T Consensus 231 ~gG~L~~~i~ 240 (423)
T 4fie_A 231 EGGALTDIVT 240 (423)
T ss_dssp TTEEHHHHHH
T ss_pred CCCcHHHHHh
Confidence 9999999875
No 140
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.53 E-value=4.5e-13 Score=144.67 Aligned_cols=260 Identities=11% Similarity=0.097 Sum_probs=161.2
Q ss_pred CCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEE
Q 005120 105 LSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFH 184 (713)
Q Consensus 105 l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 184 (713)
+..++.+.+.+ .++.+...+|.+. +|+.+.+..+ ++.+...+|.+. +|+.+.+.. .+..+.+..|.++.+|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 45666666643 3454555666664 5777777655 555556666663 577777764 55555666777777777777
Q ss_pred ccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCc
Q 005120 185 MNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQ 264 (713)
Q Consensus 185 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 264 (713)
+.+|.++......|. ..+|+.+.+.++ ++......|.++++|+.+++..| ++. .-..+|.+ .+|+.+.+ .+.++
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~-I~~~aF~~-~~L~~i~l-p~~i~ 260 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VST-IGQEAFRE-SGITTVKL-PNGVT 260 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCE-ECTTTTTT-CCCSEEEE-ETTCC
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccC-cccccccc-CCccEEEe-CCCcc
Confidence 777777655555555 467777777643 55555666777777777777654 332 22344555 66777777 34455
Q ss_pred cCCC-CCCCCCCccEEEccCCCCc----ccCCCCccc--cCccEEEccCCcCcccCChhccCCcccceeecccccCcccC
Q 005120 265 GPMP-DLSRIPNLGYLDLSSNQLN----GSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI 337 (713)
Q Consensus 265 ~~~~-~l~~l~~L~~L~Ls~N~l~----~~ip~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 337 (713)
.... .|.++++|+.+++.+|.+. ..++...|. .+|+.++|. +.++.....+|.++++|+.+.|..| ++..-
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 4444 6677777777777776653 124444444 577777777 3466666677778888888888554 55333
Q ss_pred CchhhhhccCCCCCccEEEccCCcCCCcCCCC--CC-CCceEEEecCCC
Q 005120 338 PSSIWQSRTLNATETFILDFQNNNLTNISGSF--NI-PPNVTVRLRGNP 383 (713)
Q Consensus 338 p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~--~~-~~l~~l~l~~N~ 383 (713)
+..|. .+ +|+.+++++|.+..+.... ++ ..+..+++..|.
T Consensus 339 ~~aF~-----~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 339 FSAFN-----NT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp TTSSS-----SS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred HHhCC-----CC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 34444 55 7778888888777665432 23 345667776554
No 141
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.52 E-value=1e-14 Score=151.61 Aligned_cols=84 Identities=27% Similarity=0.464 Sum_probs=69.4
Q ss_pred CcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHH--HHHHHHHhhCCCCcccceEEEEEeCC----eEEEE
Q 005120 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEF--LTEIQFLSRLHHRNLVSLVGYCDEEG----EQMLV 698 (713)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f--~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lV 698 (713)
++...+.||+|+||.||+|++ +|+.||||+++... .+++ .+|+..+.+++|||||+++|+|..++ ..|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 456678999999999999998 68999999996532 3344 45555667889999999999997653 57999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
||||++|+|.++|+
T Consensus 80 ~Ey~~~gsL~~~l~ 93 (303)
T 3hmm_A 80 SDYHEHGSLFDYLN 93 (303)
T ss_dssp EECCTTCBHHHHHH
T ss_pred ecCCCCCcHHHHHH
Confidence 99999999999986
No 142
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.51 E-value=4e-13 Score=145.05 Aligned_cols=263 Identities=10% Similarity=0.137 Sum_probs=203.0
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEc
Q 005120 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (713)
..++.+.+.+ +++..-..+|.+. +|+.+++..+ ++.+...+|.+. +|+.+.+.. .++.+.+.+|.++++|+.++|
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4456666653 4555556677775 7999999776 776777788884 699999985 777777888999999999999
Q ss_pred cccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCC
Q 005120 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (713)
Q Consensus 162 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 241 (713)
..|+++.+....|. ..+|+.+.+..+ +.......|..+++|+.+++..| ++......|.+ .+|+.+.+. +.++.
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~- 261 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTN- 261 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCE-
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccE-
Confidence 99999876666776 589999999854 77677788999999999999875 66566667777 789999994 44553
Q ss_pred CCcccccCCCCCCEEEccCCCCc-----cCCC-CCCCCCCccEEEccCCCCcccCCCCccc--cCccEEEccCCcCcccC
Q 005120 242 TIPASYSNMSKLLKLSLRNCSLQ-----GPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTI 313 (713)
Q Consensus 242 ~~~~~~~~l~~L~~L~L~~N~l~-----~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~N~l~~~~ 313 (713)
.-...|.++++|+.+++.+|.+. ...+ .|.++++|+.+++.+ .++ .|+...|. .+|+.++|..| ++...
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 33567899999999999988775 2333 788999999999984 476 67776665 78999999665 77677
Q ss_pred ChhccCCcccceeecccccCcccCCchhhhhccCCC-CCccEEEccCCcCCC
Q 005120 314 PSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNA-TETFILDFQNNNLTN 364 (713)
Q Consensus 314 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~-~~L~~L~ls~N~l~~ 364 (713)
+.+|.++ +|+.|++.+|.+....+..|. .+ ..+..|.+..|.+..
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~~~l~~~~F~-----~~~~~l~~l~vp~~~~~~ 384 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTPPQVFEKVWY-----GFPDDITVIRVPAESVEK 384 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSCCBCCCSSCC-----CSCTTCCEEEECGGGHHH
T ss_pred HHhCCCC-CCCEEEEcCCCCccccccccc-----CCCCCccEEEeCHHHHHH
Confidence 7889999 999999999988744444444 33 367888888877654
No 143
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.51 E-value=1.3e-14 Score=149.79 Aligned_cols=89 Identities=18% Similarity=0.230 Sum_probs=78.4
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
++|...+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 3588889999999999999985 468999999997532 223467999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
|||++|+|.++|+
T Consensus 112 Ey~~gG~L~~~i~ 124 (311)
T 4aw0_A 112 SYAKNGELLKYIR 124 (311)
T ss_dssp CCCTTEEHHHHHH
T ss_pred ecCCCCCHHHHHH
Confidence 9999999999985
No 144
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=1.7e-14 Score=137.36 Aligned_cols=133 Identities=18% Similarity=0.216 Sum_probs=90.5
Q ss_pred ccccCCCCCCEEECCCCCCCcCCCccccCCC-CCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCC
Q 005120 100 PEIGRLSYLTILDFMWNKISGSIPKEIGNIK-SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLN 178 (713)
Q Consensus 100 ~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 178 (713)
+.+.++.+|++|++++|+++. +|. +..+. +|++|+|++|.+++. +.+..+++|++|+|++|+|++..+..|..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 345667778888888888874 444 44444 788888888888765 5677788888888888888766556667777
Q ss_pred CCCEEEccCCccccccch--hcCCCCCccEEecccCCCcCCCCcC----CCCCCCCcEEEcccccC
Q 005120 179 KTRHFHMNNNSISGQIPP--ELSRLPSLVHMLLDNNNLTGYLPPE----LSELPKLLILQLDNNNF 238 (713)
Q Consensus 179 ~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~----l~~l~~L~~L~L~~N~l 238 (713)
+|++|++++|.+.. +|. .+..+++|++|++++|.++. +|.. +..+++|+.|++++|.+
T Consensus 89 ~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 89 DLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp TCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 88888888887753 343 56666777777777776663 3332 55566666666666554
No 145
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.51 E-value=1.3e-14 Score=153.34 Aligned_cols=99 Identities=25% Similarity=0.493 Sum_probs=82.6
Q ss_pred ccHHHHHHhhcCcccccccccCCcEEEEEEEecC------CCEEEEEEeccCCcc-cHHHHHHHHHHHhhCCC-Ccccce
Q 005120 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHH-RNLVSL 685 (713)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~------g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H-~niv~l 685 (713)
+...+++...++|...+.||+|+||.||+|.+.. ++.||||++...... ..++|.+|+++|.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3445667777889999999999999999998643 358999999765433 34679999999999965 899999
Q ss_pred EEEEEeC-CeEEEEEecCCCCCHHHHhh
Q 005120 686 VGYCDEE-GEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 686 ~g~~~~~-~~~~lV~Ey~~~GsL~~~L~ 712 (713)
+|+|... +..|||||||++|+|.++|+
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~ 161 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLR 161 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHH
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHH
Confidence 9999764 56899999999999999986
No 146
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.51 E-value=3.1e-14 Score=146.17 Aligned_cols=86 Identities=29% Similarity=0.432 Sum_probs=72.4
Q ss_pred ccccccccCCcEEEEEEEec-CCCEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCcccceEEEEEe----CCeEEEEE
Q 005120 627 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQMLVY 699 (713)
Q Consensus 627 ~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lV~ 699 (713)
...+.||+|+||.||+|... .+..||||++.... ....+.|.+|+++|++++|||||++++++.. ++..||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 44567999999999999864 48899999996533 2234579999999999999999999999864 24579999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
|||++|+|.++|+
T Consensus 109 Ey~~gg~L~~~l~ 121 (290)
T 3fpq_A 109 ELMTSGTLKTYLK 121 (290)
T ss_dssp ECCCSCBHHHHHH
T ss_pred eCCCCCCHHHHHH
Confidence 9999999999985
No 147
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=1.8e-16 Score=154.27 Aligned_cols=132 Identities=23% Similarity=0.290 Sum_probs=84.8
Q ss_pred ceeEEEcCCCCCccccCc------cccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCC
Q 005120 83 HLRELQLLNLNLSGNLSP------EIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKL 156 (713)
Q Consensus 83 ~l~~L~l~~~~l~~~~~~------~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 156 (713)
.++.+++..+.+.+.+|. .+..+++|++|+|++|++++ +| .+.++++|++|++++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344444555555555444 66777777777777777765 55 6777777777777777776 455556666777
Q ss_pred CEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccc-hhcCCCCCccEEecccCCCcCCCC
Q 005120 157 DRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTGYLP 219 (713)
Q Consensus 157 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~ 219 (713)
++|+|++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..|
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 777777777765 33 56667777777777777664332 356666677777777776665443
No 148
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=2.5e-14 Score=136.24 Aligned_cols=131 Identities=22% Similarity=0.226 Sum_probs=65.2
Q ss_pred ccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCcc
Q 005120 126 IGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV 205 (713)
Q Consensus 126 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 205 (713)
+.++.+|++|++++|+++. +|......++|++|+|++|.+++. ..|..+++|++|++++|.+++..+..+..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 4556666666666666663 233222223666666666666543 3455555555555555555544333334555555
Q ss_pred EEecccCCCcCCCCc--CCCCCCCCcEEEcccccCCCCCCccc----ccCCCCCCEEEccCCC
Q 005120 206 HMLLDNNNLTGYLPP--ELSELPKLLILQLDNNNFEGTTIPAS----YSNMSKLLKLSLRNCS 262 (713)
Q Consensus 206 ~L~L~~N~l~~~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~~----~~~l~~L~~L~L~~N~ 262 (713)
+|++++|+++. +|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|+++.|.
T Consensus 92 ~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~--~~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 92 ELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT--NKKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp EEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG--GSTTHHHHHHHHCTTCSEETTEECC
T ss_pred EEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC--CcHhHHHHHHHHCCccceeCCCcCC
Confidence 55555555532 232 3444455555555555544 22332 4444444444444443
No 149
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.47 E-value=5.7e-14 Score=145.37 Aligned_cols=88 Identities=20% Similarity=0.384 Sum_probs=73.2
Q ss_pred CcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCcccceEEEEEeCC---------
Q 005120 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--------- 693 (713)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--------- 693 (713)
+|+..+.||+|+||.||+|.. .+|+.||||+++..... ..+.|.+|+++|++++|||||++++++...+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 577889999999999999985 46899999999754432 3457999999999999999999999986543
Q ss_pred ---eEEEEEecCCCCCHHHHhh
Q 005120 694 ---EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 694 ---~~~lV~Ey~~~GsL~~~L~ 712 (713)
..|+|||||++|+|.++++
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~ 107 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMN 107 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHH
T ss_pred CCcEEEEEEecCCCCcHHHHHH
Confidence 3699999999999999985
No 150
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=2.3e-13 Score=128.76 Aligned_cols=106 Identities=20% Similarity=0.239 Sum_probs=80.1
Q ss_pred eEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEcccc
Q 005120 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (713)
Q Consensus 85 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 164 (713)
+.|+++++.++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455556666664 455442 67888888888888777778888888888888888888777777788888888888888
Q ss_pred CCCCCCchhhhcCCCCCEEEccCCccccc
Q 005120 165 YISGSLPKSFANLNKTRHFHMNNNSISGQ 193 (713)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 193 (713)
+|++..+..|.++++|++|+|++|.+...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 88877666777788888888888877643
No 151
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.46 E-value=6.9e-14 Score=146.21 Aligned_cols=85 Identities=20% Similarity=0.294 Sum_probs=74.7
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
.+.|...+.||+|+||.||+|.. ..|+.||||+++.... +.+|+.+|++++|||||++++++.+++..||||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 34577778899999999999985 4589999999976432 24799999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
|++|+|.++|+
T Consensus 132 ~~gg~L~~~l~ 142 (336)
T 4g3f_A 132 LEGGSLGQLIK 142 (336)
T ss_dssp CTTCBHHHHHH
T ss_pred cCCCcHHHHHH
Confidence 99999999985
No 152
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=1.7e-16 Score=154.49 Aligned_cols=133 Identities=20% Similarity=0.284 Sum_probs=76.9
Q ss_pred ccCCCCCCEEECCCCCCCcCCCc------cccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhh
Q 005120 102 IGRLSYLTILDFMWNKISGSIPK------EIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFA 175 (713)
Q Consensus 102 ~~~l~~L~~L~Ls~n~i~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 175 (713)
+.....++.++++.+.+++..|. .|..+++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34455666666666666666655 66666777777777776665 44 5666666666666666666 3455555
Q ss_pred cCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCC-cCCCCCCCCcEEEcccccCC
Q 005120 176 NLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFE 239 (713)
Q Consensus 176 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~ 239 (713)
.+++|++|++++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 55666666666666654 22 34555555555555555543211 23444555555555555544
No 153
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=5.6e-13 Score=126.08 Aligned_cols=106 Identities=25% Similarity=0.344 Sum_probs=74.9
Q ss_pred CCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 005120 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (713)
Q Consensus 108 L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (713)
.+++++++|.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 467888888877 4565553 6777777777777777777777777777777777777766666667777777777777
Q ss_pred CccccccchhcCCCCCccEEecccCCCcC
Q 005120 188 NSISGQIPPELSRLPSLVHMLLDNNNLTG 216 (713)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 216 (713)
|+|++..+..|..+++|++|+|++|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 77766555556666666666666666653
No 154
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.43 E-value=1.7e-13 Score=139.46 Aligned_cols=88 Identities=25% Similarity=0.412 Sum_probs=72.6
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
++|...+.||+|+||.||+|.. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5788899999999999999985 4689999999975432 23457999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||| +|+|.++|.
T Consensus 93 Ey~-~g~L~~~l~ 104 (275)
T 3hyh_A 93 EYA-GNELFDYIV 104 (275)
T ss_dssp ECC-CEEHHHHHH
T ss_pred eCC-CCCHHHHHH
Confidence 999 689999874
No 155
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.42 E-value=4.7e-14 Score=145.61 Aligned_cols=89 Identities=26% Similarity=0.377 Sum_probs=71.6
Q ss_pred cCcccccccccCCcEEEEEEEec----CCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
++|...+.||+|+||.||+|+.. .++.||||+++.... .....+.+|+++|++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 45888899999999999999742 367999999975432 223468899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
|||||++|+|.++|+
T Consensus 104 vmEy~~gg~L~~~l~ 118 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLS 118 (304)
T ss_dssp EECCCTTCEEHHHHH
T ss_pred EEEcCCCCCHHHHHH
Confidence 999999999999885
No 156
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=9.7e-13 Score=124.88 Aligned_cols=104 Identities=21% Similarity=0.269 Sum_probs=69.8
Q ss_pred eEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEcccc
Q 005120 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (713)
Q Consensus 85 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 164 (713)
+.++++++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777777774 4555443 66777777777777666667777777777777777777655555666777777777777
Q ss_pred CCCCCCchhhhcCCCCCEEEccCCccc
Q 005120 165 YISGSLPKSFANLNKTRHFHMNNNSIS 191 (713)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 191 (713)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 776555555666666666666666665
No 157
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.37 E-value=2.4e-12 Score=122.21 Aligned_cols=104 Identities=23% Similarity=0.346 Sum_probs=70.7
Q ss_pred CEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 005120 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (713)
Q Consensus 109 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (713)
+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67778877776 5666553 67777777777777777777777777777777777777655555666666666666666
Q ss_pred ccccccchhcCCCCCccEEecccCCCc
Q 005120 189 SISGQIPPELSRLPSLVHMLLDNNNLT 215 (713)
Q Consensus 189 ~l~~~~p~~l~~l~~L~~L~L~~N~l~ 215 (713)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666554445666666666666666655
No 158
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.36 E-value=1.3e-12 Score=147.65 Aligned_cols=89 Identities=27% Similarity=0.465 Sum_probs=80.5
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecC
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (713)
++|...+.||+|+||.||+|.. .+|+.||||++........+.+.+|+++|++++|||||++++++.+.+..|||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 4688889999999999999986 458999999998766555667899999999999999999999999999999999999
Q ss_pred CCCCHHHHhh
Q 005120 703 SNGTLRDQLS 712 (713)
Q Consensus 703 ~~GsL~~~L~ 712 (713)
++|+|.++|.
T Consensus 237 ~gg~L~~~i~ 246 (573)
T 3uto_A 237 SGGELFEKVA 246 (573)
T ss_dssp CCCBHHHHHT
T ss_pred CCCcHHHHHH
Confidence 9999999884
No 159
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.34 E-value=3.2e-12 Score=134.08 Aligned_cols=101 Identities=25% Similarity=0.287 Sum_probs=87.0
Q ss_pred ccccHHHHHHhhcC----------cccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCC
Q 005120 612 RSFTYGEMALATNN----------FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR 680 (713)
Q Consensus 612 ~~~~~~~~~~~~~~----------~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~ 680 (713)
..++++++..+++. |...+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34677777776654 566678999999999999975 6999999999876656667899999999999999
Q ss_pred cccceEEEEEeCCeEEEEEecCCCCCHHHHhh
Q 005120 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 681 niv~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
|||++++++...+..++||||+++|+|.++++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 134 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS 134 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH
Confidence 99999999999999999999999999999875
No 160
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.34 E-value=5.1e-13 Score=140.10 Aligned_cols=99 Identities=48% Similarity=0.783 Sum_probs=87.8
Q ss_pred ccHHHHHHhhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCC
Q 005120 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 693 (713)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 693 (713)
+.+.++...+++|...+.||+|+||.||+|...+|+.||||++........++|.+|++++++++||||++++++|...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 34455566788999999999999999999998889999999987766556678999999999999999999999999889
Q ss_pred eEEEEEecCCCCCHHHHhh
Q 005120 694 EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~ 712 (713)
..++||||+++|+|.++++
T Consensus 109 ~~~lv~e~~~~~~L~~~l~ 127 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLY 127 (321)
T ss_dssp CCEEEEECCTTCBTGGGSS
T ss_pred eEEEEEEcCCCCcHHHHHh
Confidence 9999999999999999874
No 161
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.32 E-value=1.1e-12 Score=137.69 Aligned_cols=104 Identities=44% Similarity=0.807 Sum_probs=91.0
Q ss_pred CCcccccHHHHHHhhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCcccceEE
Q 005120 609 DGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVG 687 (713)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g 687 (713)
...+.+++.++....++|...+.||+|+||.||+|...+|+.||||++...... ....|.+|++++++++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 345678899999999999999999999999999999878999999999764322 2346899999999999999999999
Q ss_pred EEEeCCeEEEEEecCCCCCHHHHhh
Q 005120 688 YCDEEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 688 ~~~~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
+|...+..++||||+++|+|.++++
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~ 119 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLR 119 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHH
T ss_pred EEecCCceEEEEEeccCCCHHHHHH
Confidence 9998889999999999999999885
No 162
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=3.9e-12 Score=134.89 Aligned_cols=97 Identities=16% Similarity=0.223 Sum_probs=79.3
Q ss_pred CCccccCccccCCCCCCEEECCC-CCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCc
Q 005120 93 NLSGNLSPEIGRLSYLTILDFMW-NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLP 171 (713)
Q Consensus 93 ~l~~~~~~~~~~l~~L~~L~Ls~-n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 171 (713)
+++. +|. +..+++|++|+|++ |.|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+
T Consensus 20 ~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 97 (347)
T 2ifg_A 20 ALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSW 97 (347)
T ss_dssp CCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCS
T ss_pred CCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCH
Confidence 4553 666 88888899999985 88888777888889999999999999888888888888888888888888887766
Q ss_pred hhhhcCCCCCEEEccCCcccc
Q 005120 172 KSFANLNKTRHFHMNNNSISG 192 (713)
Q Consensus 172 ~~~~~l~~L~~L~L~~N~l~~ 192 (713)
..|..++ |+.|+|.+|.+..
T Consensus 98 ~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 98 KTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TTTCSCC-CCEEECCSSCCCC
T ss_pred HHcccCC-ceEEEeeCCCccC
Confidence 6666665 8888888888763
No 163
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.29 E-value=2.8e-12 Score=137.95 Aligned_cols=88 Identities=22% Similarity=0.366 Sum_probs=74.0
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEe------CCe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------EGE 694 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~------~~~ 694 (713)
++|...+.||+|+||.||+|.. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4688889999999999999985 4699999999975432 234568999999999999999999999754 257
Q ss_pred EEEEEecCCCCCHHHHhh
Q 005120 695 QMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~ 712 (713)
.|||||||+ |+|.++++
T Consensus 134 ~~ivmE~~~-g~L~~~i~ 150 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIH 150 (398)
T ss_dssp EEEEEECCS-EEHHHHHT
T ss_pred EEEEEeCCC-CCHHHHHH
Confidence 899999996 78999875
No 164
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.29 E-value=8.3e-12 Score=129.80 Aligned_cols=101 Identities=39% Similarity=0.700 Sum_probs=89.2
Q ss_pred cccccHHHHHHhhcCcccc------cccccCCcEEEEEEEecCCCEEEEEEeccCC----cccHHHHHHHHHHHhhCCCC
Q 005120 611 VRSFTYGEMALATNNFNSS------TQIGQGGYGKVYKGILPDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRLHHR 680 (713)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~------~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~----~~~~~~f~~E~~~l~~l~H~ 680 (713)
...|++.++..++++|... +.||+|+||.||+|.. +++.||||++.... ....+.|.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4568999999999999887 8899999999999987 68899999986532 22346799999999999999
Q ss_pred cccceEEEEEeCCeEEEEEecCCCCCHHHHhh
Q 005120 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 681 niv~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
||+++++++...+..++||||+++|+|.++++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 122 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHH
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHH
Confidence 99999999998889999999999999999875
No 165
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.28 E-value=9.4e-12 Score=129.69 Aligned_cols=89 Identities=21% Similarity=0.425 Sum_probs=80.2
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecC
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (713)
++|...+.||+|+||.||+|... +++.||+|++........+.|.+|++++.+++||||+++++++...+..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 45777899999999999999964 58999999997666556678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhh
Q 005120 703 SNGTLRDQLS 712 (713)
Q Consensus 703 ~~GsL~~~L~ 712 (713)
++|+|.++++
T Consensus 90 ~~~~L~~~l~ 99 (310)
T 3s95_A 90 KGGTLRGIIK 99 (310)
T ss_dssp TTCBHHHHHH
T ss_pred CCCcHHHHHH
Confidence 9999999875
No 166
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.28 E-value=7.5e-12 Score=133.01 Aligned_cols=90 Identities=18% Similarity=0.282 Sum_probs=77.7
Q ss_pred HhhcCcccccccccCCcEEEEEEEec----CCCEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeE
Q 005120 621 LATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (713)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 695 (713)
...+.|...+.||+|+||.||+|+.+ .++.||||++.... ....+.+|+++|..+ +|||||++++++...+..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 34567999999999999999999742 36789999986543 345688999999998 799999999999999999
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
|+|||||++|+|.++++
T Consensus 96 ~lvmE~~~g~~L~~~~~ 112 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN 112 (361)
T ss_dssp EEEEECCCCCCHHHHHT
T ss_pred EEEEeCCCcccHHHHHc
Confidence 99999999999999875
No 167
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.27 E-value=1.2e-11 Score=128.08 Aligned_cols=90 Identities=22% Similarity=0.390 Sum_probs=80.2
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
.+.|...+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.++++++|||||++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 34688889999999999999984 56899999999765555567799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.++++
T Consensus 99 ~~~~~L~~~~~ 109 (297)
T 3fxz_A 99 LAGGSLTDVVT 109 (297)
T ss_dssp CTTCBHHHHHH
T ss_pred CCCCCHHHHHh
Confidence 99999999874
No 168
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.24 E-value=6.4e-12 Score=134.70 Aligned_cols=89 Identities=29% Similarity=0.523 Sum_probs=77.4
Q ss_pred cCcccccccccCCcEEEEEEEec----CCCEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
.+|...+.||+|+||.||+|... ++..||||+++... ....++|.+|+.++++++|||||+++|+|...+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 46788899999999999999864 46789999997643 23346799999999999999999999999988899999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.++++
T Consensus 125 ~e~~~~~sL~~~l~ 138 (373)
T 2qol_A 125 TEYMENGSLDSFLR 138 (373)
T ss_dssp EECCTTCBHHHHHH
T ss_pred EeCCCCCcHHHHHH
Confidence 99999999999985
No 169
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.24 E-value=6e-12 Score=137.42 Aligned_cols=99 Identities=22% Similarity=0.278 Sum_probs=84.4
Q ss_pred ccHHHHHHhhcCcccccccccCCcEEEEEEEecC-CCEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCcccceEEEE
Q 005120 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYC 689 (713)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~ 689 (713)
+.+.++...+++|...++||+|+||.||+|.... ++.||||++..... ...+.+.+|+.++..++|||||+++++|
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 3456667778899999999999999999999764 78999999965221 1123488999999999999999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHhh
Q 005120 690 DEEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 690 ~~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
.+.+..|+|||||++|+|.++|+
T Consensus 144 ~~~~~~~lV~Ey~~gg~L~~~l~ 166 (437)
T 4aw2_A 144 QDDNNLYLVMDYYVGGDLLTLLS 166 (437)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHH
T ss_pred eeCCEEEEEEecCCCCcHHHHHH
Confidence 99999999999999999999985
No 170
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.23 E-value=8.6e-12 Score=137.40 Aligned_cols=94 Identities=28% Similarity=0.470 Sum_probs=82.3
Q ss_pred HHHHHhhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEE
Q 005120 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 617 ~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (713)
.++....++|...+.||+|+||.||+|...++..||||+++... ...++|.+|+.+|++++|||||+++|++. .+..|
T Consensus 181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~ 258 (454)
T 1qcf_A 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY 258 (454)
T ss_dssp TCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred cceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE
Confidence 34455567788899999999999999999888899999997654 34678999999999999999999999986 56789
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+|||||++|+|.++|+
T Consensus 259 lv~e~~~~g~L~~~l~ 274 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLK 274 (454)
T ss_dssp EEECCCTTCBHHHHHH
T ss_pred EEEeecCCCcHHHHHH
Confidence 9999999999999986
No 171
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.22 E-value=1.9e-11 Score=124.48 Aligned_cols=88 Identities=35% Similarity=0.621 Sum_probs=79.4
Q ss_pred cCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecCC
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (713)
++|...+.||+|+||.||+|...+++.||||++..... ..++|.+|++++.+++||||+++++++...+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 46777899999999999999988888999999976543 35679999999999999999999999998889999999999
Q ss_pred CCCHHHHhh
Q 005120 704 NGTLRDQLS 712 (713)
Q Consensus 704 ~GsL~~~L~ 712 (713)
+|+|.++++
T Consensus 89 ~~~L~~~l~ 97 (269)
T 4hcu_A 89 HGCLSDYLR 97 (269)
T ss_dssp TCBHHHHHH
T ss_pred CCcHHHHHH
Confidence 999999885
No 172
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.22 E-value=2.4e-11 Score=127.76 Aligned_cols=90 Identities=26% Similarity=0.391 Sum_probs=79.0
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
..+|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788889999999999999986 578999999996542 223456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
|||++|+|.+++.
T Consensus 94 e~~~~~~L~~~l~ 106 (328)
T 3fe3_A 94 EYASGGEVFDYLV 106 (328)
T ss_dssp CCCTTCBHHHHHH
T ss_pred ECCCCCcHHHHHH
Confidence 9999999999874
No 173
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.22 E-value=2e-11 Score=137.51 Aligned_cols=89 Identities=25% Similarity=0.377 Sum_probs=73.4
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc---ccHHHH---HHHHHHHhhCCCCcccceEEEEEeCCeEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEF---LTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~f---~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (713)
++|...++||+|+||.||+|... +|+.||||++..... .....+ .+++.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 46888899999999999999864 589999999964321 112223 34467778889999999999999999999
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+|||||++|+|.++|+
T Consensus 269 lVmEy~~GGdL~~~l~ 284 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLS 284 (689)
T ss_dssp EEECCCCSCBHHHHHH
T ss_pred EEEecCCCCcHHHHHH
Confidence 9999999999999885
No 174
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.21 E-value=2.7e-11 Score=124.75 Aligned_cols=89 Identities=13% Similarity=0.167 Sum_probs=78.6
Q ss_pred cCcccccccccCCcEEEEEEEecC-CCEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vavK~l~~~~~~---~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
+.|...+.||+|+||.||+|.... |+.||||++...... ..+.|.+|+.++.+++||||+++++++...+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 468888999999999999999654 899999999764332 2367999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 111 e~~~g~~L~~~l~ 123 (286)
T 3uqc_A 111 EWIRGGSLQEVAD 123 (286)
T ss_dssp ECCCEEEHHHHHT
T ss_pred EecCCCCHHHHHh
Confidence 9999999999875
No 175
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.21 E-value=1.5e-11 Score=129.13 Aligned_cols=89 Identities=29% Similarity=0.486 Sum_probs=76.9
Q ss_pred cCcccccccccCCcEEEEEEEec----CCCEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
+.|...+.||+|+||.||+|... .+..||||++.... ....++|.+|++++++++||||+++++++...+..|+|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45777889999999999999974 34569999997643 23346799999999999999999999999888889999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.++++
T Consensus 129 ~e~~~~~~L~~~l~ 142 (325)
T 3kul_A 129 TEYMENGSLDTFLR 142 (325)
T ss_dssp EECCTTCBHHHHHH
T ss_pred eeCCCCCcHHHHHH
Confidence 99999999999985
No 176
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.21 E-value=1.5e-11 Score=128.15 Aligned_cols=94 Identities=31% Similarity=0.510 Sum_probs=80.5
Q ss_pred HHHHhhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeE
Q 005120 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (713)
Q Consensus 618 ~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 695 (713)
++.....+|...+.||+|+||.||+|.. .|+.||||++..... ...++|.+|++++++++|||||++++++...+..
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence 3344456788889999999999999987 688999999876443 2345799999999999999999999999988899
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
++||||+++|+|.++++
T Consensus 110 ~lv~e~~~~~~L~~~l~ 126 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLH 126 (309)
T ss_dssp EEEEECCTTCBHHHHHH
T ss_pred EEEEecCCCCcHHHHHh
Confidence 99999999999999875
No 177
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.21 E-value=6.7e-12 Score=139.78 Aligned_cols=93 Identities=33% Similarity=0.617 Sum_probs=81.7
Q ss_pred HHHhhcCcccccccccCCcEEEEEEEecC-CCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 619 MALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 619 ~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
+.....+|...+.||+|+||.||+|.... +..||||+++.... ..++|.+|+.+|++++|||||+++|+|...+..|+
T Consensus 215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 33445678888999999999999999765 78999999976443 45789999999999999999999999998889999
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
|||||++|+|.++|+
T Consensus 294 v~E~~~~g~L~~~l~ 308 (495)
T 1opk_A 294 ITEFMTYGNLLDYLR 308 (495)
T ss_dssp EEECCTTCBHHHHHH
T ss_pred EEEccCCCCHHHHHH
Confidence 999999999999985
No 178
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.21 E-value=1.2e-11 Score=132.80 Aligned_cols=93 Identities=32% Similarity=0.563 Sum_probs=80.1
Q ss_pred HHhhcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 620 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 620 ~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
....++|...+.||+|+||.||+|... +++.||||+++.... ...++|.+|+++|++++|||||+++|+|...+..|+
T Consensus 110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 334567888899999999999999975 689999999975432 223468999999999999999999999998889999
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
|||||++|+|.++++
T Consensus 190 v~e~~~~g~L~~~l~ 204 (377)
T 3cbl_A 190 VMELVQGGDFLTFLR 204 (377)
T ss_dssp EEECCTTCBHHHHHH
T ss_pred EEEcCCCCCHHHHHH
Confidence 999999999999885
No 179
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.21 E-value=1.6e-11 Score=134.97 Aligned_cols=89 Identities=35% Similarity=0.542 Sum_probs=78.4
Q ss_pred HhhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCC-eEEEEE
Q 005120 621 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLVY 699 (713)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~ 699 (713)
...++|...+.||+|+||.||+|... |+.||||+++... ..++|.+|+++|++++|||||+++|+|...+ ..|+||
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 34567888899999999999999984 7899999997654 3468999999999999999999999998765 789999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
|||++|+|.++|+
T Consensus 267 e~~~~g~L~~~l~ 279 (450)
T 1k9a_A 267 EYMAKGSLVDYLR 279 (450)
T ss_dssp ECCTTCBHHHHHH
T ss_pred EecCCCcHHHHHH
Confidence 9999999999985
No 180
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.20 E-value=6.7e-10 Score=119.86 Aligned_cols=285 Identities=14% Similarity=0.034 Sum_probs=150.1
Q ss_pred CCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCC
Q 005120 78 DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLD 157 (713)
Q Consensus 78 ~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 157 (713)
..++.+|+++.+.. +++..-..+|.++++|+.+++..+ ++.+...+|.++++|+.+.+..+ +......+|..+..++
T Consensus 67 F~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~ 143 (394)
T 4fs7_A 67 FQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKE 143 (394)
T ss_dssp TTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSE
T ss_pred hhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccc
Confidence 34556788888864 466555677888888888888655 55455667888888887766543 3323333343333222
Q ss_pred EEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEccccc
Q 005120 158 RIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNN 237 (713)
Q Consensus 158 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 237 (713)
...... +..+....|.++++|+.+.+.++. .......|..+++|+.+.+..+ ++......|.++..|+.+.+..+.
T Consensus 144 ~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~ 219 (394)
T 4fs7_A 144 ITIPEG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSL 219 (394)
T ss_dssp EECCTT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTC
T ss_pred cccCcc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCc
Confidence 221111 111223445555555555554432 2233344555555555555443 332333344444444444443322
Q ss_pred C---------------------CCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccc
Q 005120 238 F---------------------EGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS 296 (713)
Q Consensus 238 l---------------------~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~ 296 (713)
. +. .....+.++.+|+.+.+..+...-....+..+..++.+....+. ++...+.
T Consensus 220 ~~i~~~~~~~~~l~~i~ip~~~~~-i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~----i~~~~F~ 294 (394)
T 4fs7_A 220 YYLGDFALSKTGVKNIIIPDSFTE-LGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVI----VPEKTFY 294 (394)
T ss_dssp CEECTTTTTTCCCCEEEECTTCCE-ECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSE----ECTTTTT
T ss_pred eEeehhhcccCCCceEEECCCcee-cccccccccccceeEEcCCCcceeeccccccccccceeccCcee----ecccccc
Confidence 1 10 11233455566666666555433222245555666666554432 2333232
Q ss_pred --cCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCCC-C-CC
Q 005120 297 --LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-N-IP 372 (713)
Q Consensus 297 --~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~-~-~~ 372 (713)
.+|+.+.+.++ ++.....+|.++.+|+.+++.++ ++..-..+|. ++.+|+.+++..| ++.|.... . ..
T Consensus 295 ~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~-----~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 295 GCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFR-----GCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTT-----TCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred ccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhcc-----CCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 56777777654 55455667777777887777644 5422233444 5677777777665 66665432 2 45
Q ss_pred CceEEEecCC
Q 005120 373 PNVTVRLRGN 382 (713)
Q Consensus 373 ~l~~l~l~~N 382 (713)
+|+.+.+..+
T Consensus 367 ~L~~i~lp~~ 376 (394)
T 4fs7_A 367 NLKKVELPKR 376 (394)
T ss_dssp TCCEEEEEGG
T ss_pred CCCEEEECCC
Confidence 6666666443
No 181
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=3e-11 Score=128.01 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=70.6
Q ss_pred EEECCCC-CCCcCCCccccCCCCCceEeccc-CCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 005120 110 ILDFMWN-KISGSIPKEIGNIKSLELLLLNG-NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (713)
Q Consensus 110 ~L~Ls~n-~i~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (713)
.++++++ +++ .+|. +..+++|++|+|++ |.+++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3566766 676 4666 77777777777775 777766667777777777777777777777777777777777777777
Q ss_pred CccccccchhcCCCCCccEEecccCCCc
Q 005120 188 NSISGQIPPELSRLPSLVHMLLDNNNLT 215 (713)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 215 (713)
|+|++..+..|..++ |++|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 777655554454444 666666666655
No 182
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.20 E-value=2e-11 Score=130.78 Aligned_cols=87 Identities=25% Similarity=0.447 Sum_probs=72.3
Q ss_pred cccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecCCC
Q 005120 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (713)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (713)
+...+.||+|+||.||+|.. .+|+.||||++........++|.+|++++.+++|||||++++++...+..++||||+++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 34457899999999999986 45899999999876655667899999999999999999999999999999999999999
Q ss_pred CCHHHHhh
Q 005120 705 GTLRDQLS 712 (713)
Q Consensus 705 GsL~~~L~ 712 (713)
|+|.+++.
T Consensus 171 ~~L~~~l~ 178 (373)
T 2x4f_A 171 GELFDRII 178 (373)
T ss_dssp CEEHHHHH
T ss_pred CcHHHHHH
Confidence 99988774
No 183
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.20 E-value=3.4e-11 Score=126.45 Aligned_cols=89 Identities=20% Similarity=0.360 Sum_probs=75.1
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCC--------
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-------- 693 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-------- 693 (713)
++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++|||||+++++|...+
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 45778899999999999999975 689999999975433 33567999999999999999999999986543
Q ss_pred -------------------------------------------------eEEEEEecCCCCCHHHHhh
Q 005120 694 -------------------------------------------------EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 694 -------------------------------------------------~~~lV~Ey~~~GsL~~~L~ 712 (713)
..++||||+++|+|.++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 153 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMN 153 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHh
Confidence 2799999999999999875
No 184
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.20 E-value=1.9e-11 Score=124.32 Aligned_cols=89 Identities=35% Similarity=0.530 Sum_probs=79.7
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecC
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (713)
.++|...+.||+|+||.||+|...++..||||++..... ..+++.+|++++.+++||||+++++++...+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 456778899999999999999988888999999976543 3467999999999999999999999999888999999999
Q ss_pred CCCCHHHHhh
Q 005120 703 SNGTLRDQLS 712 (713)
Q Consensus 703 ~~GsL~~~L~ 712 (713)
++|+|.++++
T Consensus 86 ~~~~L~~~l~ 95 (268)
T 3sxs_A 86 SNGCLLNYLR 95 (268)
T ss_dssp TTCBHHHHHH
T ss_pred CCCcHHHHHH
Confidence 9999999874
No 185
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.19 E-value=3.3e-11 Score=123.70 Aligned_cols=90 Identities=31% Similarity=0.547 Sum_probs=77.6
Q ss_pred hhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
..++|...+.||+|+||.||+|...++..||||++..... ..++|.+|++++.+++||||+++++++...+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 4456788899999999999999998888999999976543 356799999999999999999999999988999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.++++
T Consensus 101 ~~~~~L~~~l~ 111 (283)
T 3gen_A 101 MANGCLLNYLR 111 (283)
T ss_dssp CTTCBHHHHHH
T ss_pred cCCCcHHHHHH
Confidence 99999999885
No 186
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.19 E-value=1.3e-11 Score=133.63 Aligned_cols=97 Identities=19% Similarity=0.272 Sum_probs=82.4
Q ss_pred HHHHHHhhcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCcccceEEEEEe
Q 005120 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (713)
Q Consensus 616 ~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 691 (713)
+.++....++|...+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++..++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4455666788999999999999999999965 488999999865211 122358899999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHhh
Q 005120 692 EGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 692 ~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
.+..|+|||||++|+|.++++
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~ 161 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMS 161 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHH
T ss_pred CCEEEEEEeCCCCCcHHHHHH
Confidence 999999999999999999875
No 187
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.19 E-value=2.1e-11 Score=130.47 Aligned_cols=90 Identities=23% Similarity=0.560 Sum_probs=77.3
Q ss_pred hcCcccccccccCCcEEEEEEEec--------CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCcccceEEEEEeC
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~--------~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 692 (713)
.++|...+.||+|+||.||+|... ++..||||+++.... ...+++.+|++++.++ +|||||+++++|...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 356778899999999999999852 345799999976533 2346799999999999 999999999999988
Q ss_pred CeEEEEEecCCCCCHHHHhh
Q 005120 693 GEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~ 712 (713)
+..|+||||+++|+|.++++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~ 179 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLR 179 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHH
Confidence 99999999999999999985
No 188
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.19 E-value=3.4e-11 Score=127.46 Aligned_cols=91 Identities=25% Similarity=0.396 Sum_probs=78.7
Q ss_pred hhcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
..+.|...+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++++++|||||++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 346788899999999999999985 5689999999976432 22346899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
|||++|+|.+++.
T Consensus 88 E~~~gg~L~~~l~ 100 (347)
T 3zgw_A 88 EYCPGGELFDYII 100 (347)
T ss_dssp ECCTTCBHHHHHH
T ss_pred eCCCCCCHHHHHH
Confidence 9999999999874
No 189
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.19 E-value=5.5e-11 Score=126.62 Aligned_cols=90 Identities=22% Similarity=0.355 Sum_probs=78.7
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcc------cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 695 (713)
.+.|...+.||+|+||.||++... +|+.||||.+...... ..+++.+|+.++.+++|||||++++++...+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 346788899999999999999864 5899999999764321 246799999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
|+||||+++|+|.+++.
T Consensus 91 ~lv~e~~~gg~L~~~l~ 107 (361)
T 2yab_A 91 VLILELVSGGELFDFLA 107 (361)
T ss_dssp EEEEECCCSCBHHHHHT
T ss_pred EEEEEcCCCCcHHHHHH
Confidence 99999999999999874
No 190
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.19 E-value=1.4e-11 Score=135.65 Aligned_cols=92 Identities=32% Similarity=0.544 Sum_probs=80.3
Q ss_pred HHHhhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 619 MALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 619 ~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
+....++|...+.||+|+||.||+|...++..||||+++.... ..++|.+|+++|++++|||||+++|+|.. +..++|
T Consensus 179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv 256 (452)
T 1fmk_A 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256 (452)
T ss_dssp SBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred cccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence 3445567888899999999999999998888899999976543 35689999999999999999999999865 678999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
||||++|+|.++|+
T Consensus 257 ~e~~~~gsL~~~l~ 270 (452)
T 1fmk_A 257 TEYMSKGSLLDFLK 270 (452)
T ss_dssp ECCCTTCBHHHHHS
T ss_pred ehhhcCCCHHHHHH
Confidence 99999999999985
No 191
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.19 E-value=1.8e-11 Score=126.43 Aligned_cols=89 Identities=33% Similarity=0.543 Sum_probs=77.1
Q ss_pred cCcccccccccCCcEEEEEEEe-----cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeC--CeEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQM 696 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 696 (713)
++|...+.||+|+||.||+|.+ .+|+.||||++........+.|.+|++++.+++||||++++++|... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4577789999999999999985 25789999999876655567899999999999999999999998653 4589
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||+++|+|.++++
T Consensus 90 lv~e~~~~~~L~~~l~ 105 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQ 105 (295)
T ss_dssp EEEECCTTCBHHHHHH
T ss_pred EEEEeCCCCCHHHHHH
Confidence 9999999999999874
No 192
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=4.3e-13 Score=143.35 Aligned_cols=110 Identities=15% Similarity=0.158 Sum_probs=52.9
Q ss_pred CCCCEEECCCCCCCcCCCccccC-----CCCCceEecccCCCCCcCCccCC-CCCCCCEEEccccCCCCCCchhhh----
Q 005120 106 SYLTILDFMWNKISGSIPKEIGN-----IKSLELLLLNGNELTGSLPEELG-YLPKLDRIQIDQNYISGSLPKSFA---- 175 (713)
Q Consensus 106 ~~L~~L~Ls~n~i~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~---- 175 (713)
+.|+.|+|++|.++......+.. .++|++|+|++|.++......+. .+++|++|+|++|.++......+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45666666666665433332222 24566666666665432222221 234556666666655533333321
Q ss_pred -cCCCCCEEEccCCccccc----cchhcCCCCCccEEecccCCCc
Q 005120 176 -NLNKTRHFHMNNNSISGQ----IPPELSRLPSLVHMLLDNNNLT 215 (713)
Q Consensus 176 -~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~ 215 (713)
..++|++|+|++|.|+.. ++..+..+++|++|+|++|.|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 235566666666655431 2223344455555555555544
No 193
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.18 E-value=2.6e-11 Score=124.81 Aligned_cols=89 Identities=29% Similarity=0.505 Sum_probs=78.2
Q ss_pred cCcccccccccCCcEEEEEEEecC-C-------CEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPD-G-------TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g-------~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 695 (713)
++|...+.||+|+||.||+|.... + ..||+|++........+.|.+|++++++++||||+++++++...+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 457778899999999999998543 3 47999999766555667899999999999999999999999988899
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
++||||+++|+|.++++
T Consensus 88 ~lv~e~~~~~~L~~~l~ 104 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLK 104 (289)
T ss_dssp EEEEECCTTCBHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 99999999999999875
No 194
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.18 E-value=2.1e-11 Score=132.10 Aligned_cols=99 Identities=24% Similarity=0.270 Sum_probs=84.3
Q ss_pred ccHHHHHHhhcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCcccceEEEE
Q 005120 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYC 689 (713)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~ 689 (713)
+.+.+.....++|...+.||+|+||.||++... +|+.||||+++.... ...+.+.+|..++.+++|||||++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345566667788999999999999999999974 589999999965321 1223488999999999999999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHhh
Q 005120 690 DEEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 690 ~~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
.+.+..|+|||||++|+|.++|+
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~ 153 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLS 153 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHH
T ss_pred eeCCEEEEEEcCCCCCcHHHHHH
Confidence 99999999999999999999885
No 195
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.17 E-value=1.5e-11 Score=130.95 Aligned_cols=99 Identities=26% Similarity=0.528 Sum_probs=82.9
Q ss_pred ccHHHHHHhhcCcccccccccCCcEEEEEEEe------cCCCEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCcccce
Q 005120 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSL 685 (713)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l 685 (713)
+...++....++|...+.||+|+||.||+|.. .+++.||||++..... ...+.|.+|++++.++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44556667778899999999999999999974 2357899999976433 2345799999999999 89999999
Q ss_pred EEEEEeCC-eEEEEEecCCCCCHHHHhh
Q 005120 686 VGYCDEEG-EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 686 ~g~~~~~~-~~~lV~Ey~~~GsL~~~L~ 712 (713)
+|+|...+ ..++||||+++|+|.++++
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~ 119 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLR 119 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHH
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHH
Confidence 99997754 4899999999999999986
No 196
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.17 E-value=2.9e-11 Score=127.91 Aligned_cols=93 Identities=27% Similarity=0.415 Sum_probs=79.7
Q ss_pred HHhhcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccC-----CcccHHHHHHHHHHHhhCCCCcccceEEEEEeCC
Q 005120 620 ALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 693 (713)
Q Consensus 620 ~~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 693 (713)
....++|...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++++++|||||++++++...+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 44456788899999999999999986 45789999998643 2234467999999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHhh
Q 005120 694 EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~ 712 (713)
..++||||+++|+|.++++
T Consensus 102 ~~~lv~e~~~gg~L~~~l~ 120 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLN 120 (345)
T ss_dssp EEEEEEECCCSCBHHHHEE
T ss_pred eEEEEEeCCCCCcHHHHHH
Confidence 9999999999999999874
No 197
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.17 E-value=6.2e-11 Score=127.48 Aligned_cols=89 Identities=25% Similarity=0.445 Sum_probs=79.8
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecC
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (713)
+.|...+.||+|+||.||+|... +|+.||+|.+..........+.+|++++.+++|||||++++++...+..++|||||
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 46888899999999999999864 58899999997765555567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhh
Q 005120 703 SNGTLRDQLS 712 (713)
Q Consensus 703 ~~GsL~~~L~ 712 (713)
++|+|.+++.
T Consensus 131 ~gg~L~~~l~ 140 (387)
T 1kob_A 131 SGGELFDRIA 140 (387)
T ss_dssp CCCBHHHHTT
T ss_pred CCCcHHHHHH
Confidence 9999999875
No 198
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.17 E-value=2.5e-11 Score=128.27 Aligned_cols=94 Identities=29% Similarity=0.541 Sum_probs=80.7
Q ss_pred HHHhhcCcccccccccCCcEEEEEEEec------CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEe
Q 005120 619 MALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (713)
Q Consensus 619 ~~~~~~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 691 (713)
+....++|...+.||+|+||.||+|... +++.||||+++.... ...+.|.+|+.++++++||||++++++|..
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445677888999999999999999874 247899999976433 234679999999999999999999999998
Q ss_pred CCeEEEEEecCCCCCHHHHhh
Q 005120 692 EGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 692 ~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
.+..++||||+++|+|.++++
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~ 142 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLR 142 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHH
T ss_pred CCceEEEEecCCCCcHHHHHH
Confidence 889999999999999999885
No 199
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.17 E-value=1.7e-11 Score=137.86 Aligned_cols=93 Identities=31% Similarity=0.538 Sum_probs=80.8
Q ss_pred HHHHhhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 618 ~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
++....++|...+.||+|+||.||+|...++..||||+++.... ..++|.+|+++|++++|+|||+++|+|.. +..|+
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 33445567888899999999999999998888899999976543 35689999999999999999999999865 67899
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
|||||++|+|.++|+
T Consensus 339 v~e~~~~gsL~~~l~ 353 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLK 353 (535)
T ss_dssp EECCCTTEEHHHHHS
T ss_pred eeehhcCCcHHHHHh
Confidence 999999999999985
No 200
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.17 E-value=1.1e-10 Score=121.77 Aligned_cols=88 Identities=23% Similarity=0.364 Sum_probs=76.8
Q ss_pred Cccc-ccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEEEEec
Q 005120 625 NFNS-STQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 625 ~~~~-~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
.|.. .+.||+|+||.||+|.. .+++.||||++........+.+.+|++++.++ +||||+++++++...+..|+||||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 92 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence 4544 47899999999999984 46899999999776555567899999999985 899999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.++++
T Consensus 93 ~~~~~L~~~l~ 103 (316)
T 2ac3_A 93 MRGGSILSHIH 103 (316)
T ss_dssp CTTCBHHHHHH
T ss_pred CCCCcHHHHHh
Confidence 99999999874
No 201
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.17 E-value=9.2e-13 Score=140.81 Aligned_cols=135 Identities=13% Similarity=0.142 Sum_probs=101.1
Q ss_pred cceeEEEcCCCCCccccCccccC-----CCCCCEEECCCCCCCcCCCccc-cCCCCCceEecccCCCCCcCCccC-----
Q 005120 82 LHLRELQLLNLNLSGNLSPEIGR-----LSYLTILDFMWNKISGSIPKEI-GNIKSLELLLLNGNELTGSLPEEL----- 150 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~-----l~~L~~L~Ls~n~i~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~----- 150 (713)
.+++.|++++|.++......+.. .++|++|+|++|.++......+ ..+++|++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 57999999999998654444332 3799999999999975433333 346789999999999985444443
Q ss_pred CCCCCCCEEEccccCCCCC----CchhhhcCCCCCEEEccCCcccccc----chhcCCCCCccEEecccCCCcC
Q 005120 151 GYLPKLDRIQIDQNYISGS----LPKSFANLNKTRHFHMNNNSISGQI----PPELSRLPSLVHMLLDNNNLTG 216 (713)
Q Consensus 151 ~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~L~~N~l~~ 216 (713)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|+... +..+...++|++|+|++|.|+.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 3568999999999999743 4555678999999999999997532 4455666677777777777653
No 202
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.16 E-value=5.7e-11 Score=121.46 Aligned_cols=89 Identities=21% Similarity=0.384 Sum_probs=79.1
Q ss_pred cCcccccccccCCcEEEEEEEecC-CCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecC
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (713)
+.|...+.||+|+||.||+|.... +..||+|++........+.|.+|++++++++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 457788999999999999998654 7799999997755555678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhh
Q 005120 703 SNGTLRDQLS 712 (713)
Q Consensus 703 ~~GsL~~~L~ 712 (713)
++|+|.+++.
T Consensus 89 ~~~~L~~~~~ 98 (277)
T 3f3z_A 89 TGGELFERVV 98 (277)
T ss_dssp CSCBHHHHHH
T ss_pred CCCcHHHHHH
Confidence 9999998764
No 203
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.16 E-value=1e-10 Score=122.90 Aligned_cols=89 Identities=20% Similarity=0.395 Sum_probs=77.8
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcc------cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (713)
+.|...+.||+|+||.||+|... +|+.||||.+...... ..+++.+|+.++.+++|||||++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 34777899999999999999864 5899999998754321 3567999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||+++|+|.+++.
T Consensus 91 lv~e~~~~~~L~~~l~ 106 (326)
T 2y0a_A 91 LILELVAGGELFDFLA 106 (326)
T ss_dssp EEEECCCSCBHHHHHT
T ss_pred EEEEcCCCCCHHHHHH
Confidence 9999999999999875
No 204
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.16 E-value=5.7e-11 Score=126.17 Aligned_cols=89 Identities=22% Similarity=0.339 Sum_probs=76.7
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC-----cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
+.|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++.+++|||||++++++...+..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 35777899999999999999864 58999999985421 1235679999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
|||||++|+|.+++.
T Consensus 104 v~e~~~g~~L~~~l~ 118 (351)
T 3c0i_A 104 VFEFMDGADLCFEIV 118 (351)
T ss_dssp EEECCSSCBHHHHHH
T ss_pred EEeCCCCCCHHHHHH
Confidence 999999999988763
No 205
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.16 E-value=9.3e-11 Score=122.88 Aligned_cols=89 Identities=18% Similarity=0.321 Sum_probs=78.2
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
.+.|...+.||+|+||.||+|... +|+.||+|.+.... .....+.+|+.++..++|||||++++++...+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 356888899999999999999864 57899999987543 2345689999999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.++++
T Consensus 83 ~~g~~L~~~l~ 93 (321)
T 1tki_A 83 ISGLDIFERIN 93 (321)
T ss_dssp CCCCBHHHHHT
T ss_pred CCCCCHHHHHH
Confidence 99999999875
No 206
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.16 E-value=2.3e-11 Score=123.74 Aligned_cols=88 Identities=23% Similarity=0.416 Sum_probs=76.6
Q ss_pred cCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeC--CeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~ 699 (713)
++|...+.||+|+||.||+|+. +|+.||||++..... ...++|.+|+.++++++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 4577788999999999999998 488999999976432 3346799999999999999999999999876 6789999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 89 e~~~~~~L~~~l~ 101 (271)
T 3kmu_A 89 HWMPYGSLYNVLH 101 (271)
T ss_dssp ECCTTCBHHHHHH
T ss_pred cccCCCcHHHHHh
Confidence 9999999999986
No 207
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.16 E-value=5.9e-11 Score=125.21 Aligned_cols=89 Identities=25% Similarity=0.275 Sum_probs=77.7
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
++|...+.||+|+||.||++... +|+.||||+++... ....+.+.+|+.++.+++||||+++++++...+..|+||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 46888899999999999999864 58999999996532 223457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 85 E~~~gg~L~~~l~ 97 (337)
T 1o6l_A 85 EYANGGELFFHLS 97 (337)
T ss_dssp ECCTTCBHHHHHH
T ss_pred eCCCCCcHHHHHH
Confidence 9999999998874
No 208
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.15 E-value=8e-11 Score=121.44 Aligned_cols=88 Identities=26% Similarity=0.414 Sum_probs=76.1
Q ss_pred CcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecCC
Q 005120 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (713)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (713)
.+....+||+|+||.||+|.. .+++.||||.+........+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 345566899999999999985 4588999999987655556789999999999999999999999999999999999999
Q ss_pred CCCHHHHhh
Q 005120 704 NGTLRDQLS 712 (713)
Q Consensus 704 ~GsL~~~L~ 712 (713)
+|+|.++++
T Consensus 103 ~~~L~~~l~ 111 (295)
T 2clq_A 103 GGSLSALLR 111 (295)
T ss_dssp EEEHHHHHH
T ss_pred CCCHHHHHH
Confidence 999999875
No 209
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.15 E-value=5.6e-11 Score=124.68 Aligned_cols=89 Identities=27% Similarity=0.379 Sum_probs=75.8
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcc-cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
++|...+.||+|+||.||+|... +++.||||++...... ..+.+.+|+.+++.++|||||++++++...+..|+||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 56888899999999999999865 6899999998654322 235689999999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.++++
T Consensus 87 ~~~~~L~~~l~ 97 (323)
T 3tki_A 87 CSGGELFDRIE 97 (323)
T ss_dssp CTTEEGGGGSB
T ss_pred CCCCcHHHHHh
Confidence 99999998875
No 210
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.15 E-value=7.8e-11 Score=121.79 Aligned_cols=89 Identities=26% Similarity=0.350 Sum_probs=77.4
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
+.|...+.||+|+||.||+|.. ..++.||||++...... ..+.|.+|+.++.+++||||+++++++...+..|+||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 4678889999999999999985 45889999998653322 2357899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 91 e~~~g~~L~~~l~ 103 (294)
T 4eqm_A 91 EYIEGPTLSEYIE 103 (294)
T ss_dssp ECCCSCBHHHHHH
T ss_pred eCCCCCCHHHHHH
Confidence 9999999999874
No 211
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.15 E-value=5.1e-11 Score=125.21 Aligned_cols=90 Identities=27% Similarity=0.437 Sum_probs=72.8
Q ss_pred hcCcccccccccCCcEEEEEEEe----cCCCEEEEEEeccCCc----ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCe
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~----~~g~~vavK~l~~~~~----~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 694 (713)
.++|...+.||+|+||.||++.. .+|+.||||+++.... .....+.+|+.++++++|||||++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35688889999999999999986 4689999999976432 223458899999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHhh
Q 005120 695 QMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~ 712 (713)
.|+||||+++|+|.++++
T Consensus 96 ~~lv~e~~~~~~L~~~l~ 113 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLE 113 (327)
T ss_dssp EEEEEECCTTEEHHHHHH
T ss_pred EEEEEeCCCCCcHHHHHH
Confidence 999999999999998874
No 212
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.15 E-value=3.7e-11 Score=122.00 Aligned_cols=89 Identities=35% Similarity=0.588 Sum_probs=79.5
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecC
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (713)
.++|...+.||+|+||.||+|...+++.||||++..... ..+++.+|++++.+++||||+++++++...+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 346777889999999999999988888999999976543 3468999999999999999999999999888999999999
Q ss_pred CCCCHHHHhh
Q 005120 703 SNGTLRDQLS 712 (713)
Q Consensus 703 ~~GsL~~~L~ 712 (713)
++|+|.++++
T Consensus 86 ~~~~L~~~~~ 95 (267)
T 3t9t_A 86 EHGCLSDYLR 95 (267)
T ss_dssp TTCBHHHHHH
T ss_pred CCCcHHHHHh
Confidence 9999999875
No 213
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.14 E-value=9.4e-11 Score=122.63 Aligned_cols=89 Identities=27% Similarity=0.431 Sum_probs=76.7
Q ss_pred cCcccccccccCCcEEEEEEEecC-CCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCC--eEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~ 699 (713)
+.|...+.||+|+||.||+|.... |+.||||++..... ...+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 457778999999999999999654 89999999975432 33567899999999999999999999998755 779999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 89 e~~~~~~L~~~l~ 101 (319)
T 4euu_A 89 EFCPCGSLYTVLE 101 (319)
T ss_dssp ECCTTCBHHHHHH
T ss_pred eCCCCCCHHHHHH
Confidence 9999999999885
No 214
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.14 E-value=3.4e-11 Score=128.78 Aligned_cols=90 Identities=30% Similarity=0.509 Sum_probs=77.4
Q ss_pred hcCcccccccccCCcEEEEEEEec------CCCEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 695 (713)
.++|...+.||+|+||.||+|.+. .++.||||++.... .....+|.+|+.++++++|||||++++++...+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 346778899999999999999853 35689999996542 33345799999999999999999999999988889
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
++||||+++|+|.++++
T Consensus 150 ~lv~e~~~~g~L~~~l~ 166 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLR 166 (367)
T ss_dssp EEEEECCTTEEHHHHHH
T ss_pred EEEEEeCCCCCHHHHHH
Confidence 99999999999999875
No 215
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.14 E-value=7.1e-11 Score=125.31 Aligned_cols=88 Identities=27% Similarity=0.385 Sum_probs=71.4
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
.+.|...+.||+|+||.||+|... +++.||||++.... ..+.+.+|++++.+++||||+++++++...+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 356888899999999999999975 47899999997543 345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.+++.
T Consensus 130 ~~~~~L~~~l~ 140 (349)
T 2w4o_A 130 VTGGELFDRIV 140 (349)
T ss_dssp CCSCBHHHHHT
T ss_pred CCCCCHHHHHH
Confidence 99999999875
No 216
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.13 E-value=3.2e-11 Score=125.62 Aligned_cols=91 Identities=30% Similarity=0.544 Sum_probs=78.4
Q ss_pred hhcCcccccccccCCcEEEEEEEe------cCCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCe
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 694 (713)
..++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 456688889999999999999985 2357899999975432 334679999999999999999999999998889
Q ss_pred EEEEEecCCCCCHHHHhh
Q 005120 695 QMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~ 712 (713)
.++||||+++|+|.++++
T Consensus 101 ~~lv~e~~~~~~L~~~l~ 118 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLR 118 (314)
T ss_dssp CEEEEECCTTCBHHHHHH
T ss_pred eEEEEeecCCCCHHHHHH
Confidence 999999999999999885
No 217
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.13 E-value=1.1e-10 Score=119.71 Aligned_cols=90 Identities=28% Similarity=0.496 Sum_probs=78.7
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc--ccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 698 (713)
.++|...+.||+|+||.||+|... +++.||||++..... ....++.+|+..+.++ +||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 346788899999999999999965 689999999976432 3346789999999999 999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.++++
T Consensus 90 ~e~~~~~~L~~~l~ 103 (289)
T 1x8b_A 90 NEYCNGGSLADAIS 103 (289)
T ss_dssp EECCTTCBHHHHHH
T ss_pred EEecCCCcHHHHHH
Confidence 99999999999875
No 218
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.13 E-value=9.7e-11 Score=124.89 Aligned_cols=89 Identities=22% Similarity=0.421 Sum_probs=78.0
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++|||||++++++...+..|+|||
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e 108 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 46888899999999999999864 589999999976432 234578999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|+++|+|.+++.
T Consensus 109 ~~~gg~L~~~l~ 120 (362)
T 2bdw_A 109 LVTGGELFEDIV 120 (362)
T ss_dssp CCCSCBHHHHHT
T ss_pred cCCCCCHHHHHH
Confidence 999999998874
No 219
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.13 E-value=3.1e-11 Score=126.42 Aligned_cols=99 Identities=27% Similarity=0.520 Sum_probs=83.5
Q ss_pred ccHHHHHHhhcCcccccccccCCcEEEEEEEec------CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceE
Q 005120 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLV 686 (713)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~ 686 (713)
+..+++....++|...+.||+|+||.||+|... .++.||||.+..... ....+|.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 334455566778999999999999999999854 367899999975433 2345799999999999999999999
Q ss_pred EEEEeCCeEEEEEecCCCCCHHHHhh
Q 005120 687 GYCDEEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 687 g~~~~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
+++...+..++||||+++|+|.++++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~ 120 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLR 120 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHH
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHH
Confidence 99988889999999999999999875
No 220
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.13 E-value=1.2e-10 Score=124.28 Aligned_cols=89 Identities=21% Similarity=0.306 Sum_probs=78.5
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
.++|...+.||+|+||.||++... +|+.||||++..... ..+.+.+|+.++++++|||||++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 356888899999999999999865 689999999976433 235788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.++++
T Consensus 98 ~~~~~L~~~l~ 108 (361)
T 3uc3_A 98 ASGGELYERIC 108 (361)
T ss_dssp CCSCBHHHHHH
T ss_pred CCCCCHHHHHH
Confidence 99999998874
No 221
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.13 E-value=5.1e-11 Score=125.36 Aligned_cols=95 Identities=26% Similarity=0.488 Sum_probs=80.6
Q ss_pred HHHHhhcCcccccccccCCcEEEEEEEecC------CCEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCcccceEEEE
Q 005120 618 EMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYC 689 (713)
Q Consensus 618 ~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~------g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~ 689 (713)
++....++|...+.||+|+||.||+|.... +..||||.+..... ...+.+.+|++++.++ +||||++++++|
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 344556789999999999999999998532 24799999976432 3346799999999999 999999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHhh
Q 005120 690 DEEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 690 ~~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
...+..++||||+++|+|.++++
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~ 142 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLR 142 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHH
T ss_pred ecCCceEEEEecCCCCcHHHHHH
Confidence 98899999999999999999875
No 222
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.12 E-value=6.1e-11 Score=121.36 Aligned_cols=89 Identities=30% Similarity=0.536 Sum_probs=77.5
Q ss_pred hhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
..++|...+.||+|+||.||+|...++..||||++.... ...+.|.+|++++++++||||+++++++. .+..++||||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 88 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEY 88 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEec
Confidence 345688889999999999999998888899999997643 23568999999999999999999999986 4568999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.++++
T Consensus 89 ~~~~~L~~~l~ 99 (279)
T 1qpc_A 89 MENGSLVDFLK 99 (279)
T ss_dssp CTTCBHHHHTT
T ss_pred CCCCCHHHHHh
Confidence 99999999875
No 223
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.12 E-value=1.1e-10 Score=121.12 Aligned_cols=89 Identities=22% Similarity=0.384 Sum_probs=75.8
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecC
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (713)
+.|...+.||+|+||.||++... +|+.||||.+........+.+.+|++++.+++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 45778899999999999999864 68999999998655444567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhh
Q 005120 703 SNGTLRDQLS 712 (713)
Q Consensus 703 ~~GsL~~~L~ 712 (713)
++|+|.+++.
T Consensus 89 ~~~~L~~~l~ 98 (304)
T 2jam_A 89 SGGELFDRIL 98 (304)
T ss_dssp CSCBHHHHHH
T ss_pred CCccHHHHHH
Confidence 9999998874
No 224
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.12 E-value=5.5e-11 Score=124.67 Aligned_cols=89 Identities=22% Similarity=0.268 Sum_probs=74.7
Q ss_pred hhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCC----eEEE
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----EQML 697 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~l 697 (713)
..++|...+.||+|+||.||+|+.. ++.||||++..... ....+.+|+.++.+++|||||++++++.... ..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3457888899999999999999874 78999999965432 2345677999999999999999999997743 3699
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
||||+++|+|.++++
T Consensus 100 v~e~~~~g~L~~~l~ 114 (322)
T 3soc_A 100 ITAFHEKGSLSDFLK 114 (322)
T ss_dssp EEECCTTCBHHHHHH
T ss_pred EEecCCCCCHHHHHH
Confidence 999999999999875
No 225
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.12 E-value=1.2e-10 Score=125.55 Aligned_cols=90 Identities=21% Similarity=0.259 Sum_probs=78.4
Q ss_pred hcCcccccccccC--CcEEEEEEEec-CCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 623 TNNFNSSTQIGQG--GYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 623 ~~~~~~~~~iG~G--~fg~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
.++|...+.||+| +||.||+|... +|+.||||++..... ...+.+.+|+.++++++|||||++++++...+..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3467788999999 99999999965 589999999975432 223568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
|||||++|+|.++++
T Consensus 104 v~e~~~~~~L~~~l~ 118 (389)
T 3gni_B 104 VTSFMAYGSAKDLIC 118 (389)
T ss_dssp EEECCTTCBHHHHHH
T ss_pred EEEccCCCCHHHHHh
Confidence 999999999999874
No 226
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.12 E-value=1.2e-10 Score=122.34 Aligned_cols=89 Identities=31% Similarity=0.481 Sum_probs=77.6
Q ss_pred cCcccccccccCCcEEEEEEEe-----cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEe--CCeEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQM 696 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~ 696 (713)
++|...+.||+|+||.||+|.+ ..++.||||++........+.|.+|++++++++||||+++++++.. ....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4677889999999999999984 3578999999987665556779999999999999999999999874 45689
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||+++|+|.++++
T Consensus 103 lv~e~~~~~~L~~~l~ 118 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQ 118 (327)
T ss_dssp EEEECCTTCBHHHHHH
T ss_pred EEEeecCCCCHHHHHH
Confidence 9999999999999874
No 227
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.12 E-value=8.6e-11 Score=122.90 Aligned_cols=89 Identities=19% Similarity=0.319 Sum_probs=77.6
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
++|...+.||+|+||.||++... +|+.||||+++... ....+.+.+|+.+++.++|||||++++++.+.+..|+||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 46788899999999999999864 58999999996532 123456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 86 e~~~gg~L~~~l~ 98 (318)
T 1fot_A 86 DYIEGGELFSLLR 98 (318)
T ss_dssp CCCCSCBHHHHHH
T ss_pred eCCCCCCHHHHHH
Confidence 9999999999874
No 228
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.12 E-value=1.2e-10 Score=120.61 Aligned_cols=90 Identities=24% Similarity=0.466 Sum_probs=77.0
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
.+.|...+.||+|+||.||+|... +|+.||+|.+........++|.+|++++.+++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 356788899999999999999975 4889999999776555667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.+++.
T Consensus 98 ~~~~~l~~~~~ 108 (302)
T 2j7t_A 98 CPGGAVDAIML 108 (302)
T ss_dssp CTTEEHHHHHH
T ss_pred CCCCcHHHHHH
Confidence 99999998864
No 229
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.11 E-value=1.7e-10 Score=118.26 Aligned_cols=89 Identities=24% Similarity=0.416 Sum_probs=77.8
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc------ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (713)
++|...+.||+|+||.||++... +|+.||||.+..... ...++|.+|+.++.+++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 35777899999999999999975 589999999865422 13567999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||+++|+|.+++.
T Consensus 85 lv~e~~~~~~L~~~l~ 100 (283)
T 3bhy_A 85 LILELVSGGELFDFLA 100 (283)
T ss_dssp EEEECCCSCBHHHHHH
T ss_pred EEEeecCCCcHHHHHH
Confidence 9999999999999874
No 230
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.11 E-value=4.1e-11 Score=123.20 Aligned_cols=93 Identities=33% Similarity=0.603 Sum_probs=80.9
Q ss_pred HHHhhcCcccccccccCCcEEEEEEEecC-CCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 619 MALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 619 ~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
+....++|...+.||+|+||.||+|.... +..||||++.... ...++|.+|++++++++||||+++++++...+..++
T Consensus 8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 33455678888999999999999999754 7899999997543 345679999999999999999999999998899999
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
||||+++|+|.++++
T Consensus 87 v~e~~~~~~L~~~~~ 101 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLR 101 (288)
T ss_dssp EEECCTTEEHHHHHH
T ss_pred EEEcCCCCcHHHHHH
Confidence 999999999999874
No 231
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.11 E-value=8.6e-11 Score=119.66 Aligned_cols=89 Identities=35% Similarity=0.519 Sum_probs=73.2
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc----ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~----~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
.++|...+.||+|+||.||+|.. .|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 35688889999999999999997 488999999865322 2246789999999999999999999999988899999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.++++
T Consensus 85 ~e~~~~~~L~~~~~ 98 (271)
T 3dtc_A 85 MEFARGGPLNRVLS 98 (271)
T ss_dssp EECCTTEEHHHHHT
T ss_pred EEcCCCCCHHHHhh
Confidence 99999999999874
No 232
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.11 E-value=1.3e-10 Score=119.50 Aligned_cols=89 Identities=19% Similarity=0.300 Sum_probs=77.7
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
+.|...+.||+|+||.||++... +|..||||++.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 35777899999999999999864 58899999987543 23457899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.+++.
T Consensus 102 ~~~~~L~~~l~ 112 (285)
T 3is5_A 102 CEGGELLERIV 112 (285)
T ss_dssp CSCCBHHHHHH
T ss_pred CCCCcHHHHHH
Confidence 99999998873
No 233
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.11 E-value=5.3e-11 Score=123.91 Aligned_cols=92 Identities=27% Similarity=0.499 Sum_probs=79.0
Q ss_pred HhhcCcccccccccCCcEEEEEEEe------cCCCEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCcccceEEEEEeC
Q 005120 621 LATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (713)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 692 (713)
...++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++.++ +||||+++++++...
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 3446788889999999999999984 2467899999976433 3346799999999999 999999999999988
Q ss_pred CeEEEEEecCCCCCHHHHhh
Q 005120 693 GEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~ 712 (713)
+..++||||+++|+|.++++
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~ 119 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLR 119 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHH
T ss_pred CCcEEEEecCCCCCHHHHHH
Confidence 99999999999999999875
No 234
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.10 E-value=1e-10 Score=122.09 Aligned_cols=91 Identities=26% Similarity=0.403 Sum_probs=76.6
Q ss_pred hhcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEe----CCeEE
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQM 696 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~ 696 (713)
..++|...+.||+|+||.||++.. .+|+.||||++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 345688889999999999999986 5689999999976555556789999999999999999999999963 34689
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+|+||+++|+|.++++
T Consensus 107 lv~e~~~~~~L~~~l~ 122 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIE 122 (317)
T ss_dssp EEEECCTTCBHHHHHH
T ss_pred EEEEeCCCCcHHHHHH
Confidence 9999999999999874
No 235
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.10 E-value=1.5e-10 Score=122.47 Aligned_cols=89 Identities=24% Similarity=0.333 Sum_probs=76.7
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc---ccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 698 (713)
++|...+.||+|+||.||++... +|+.||||++..... ...+.+.+|..++.++ +|||||++++++...+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 45778899999999999999975 488999999975432 2234588999999988 899999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.++++
T Consensus 89 ~e~~~gg~L~~~l~ 102 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQ 102 (345)
T ss_dssp ECCCCSCBHHHHHH
T ss_pred EeCCCCCcHHHHHH
Confidence 99999999998874
No 236
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.10 E-value=1.2e-10 Score=121.42 Aligned_cols=89 Identities=34% Similarity=0.543 Sum_probs=75.2
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
.++|...+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++|||||++++++..++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 356888899999999999999988899999999965432 224578999999999999999999999998899999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|+++ +|.+++.
T Consensus 100 ~~~~-~l~~~~~ 110 (311)
T 3niz_A 100 FMEK-DLKKVLD 110 (311)
T ss_dssp CCSE-EHHHHHH
T ss_pred CCCC-CHHHHHH
Confidence 9995 7877764
No 237
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.10 E-value=1.5e-10 Score=122.94 Aligned_cols=91 Identities=25% Similarity=0.350 Sum_probs=77.3
Q ss_pred hhcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEE
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 696 (713)
..++|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|.+++..+ +|||||++++++...+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3467888999999999999999864 58999999997532 22345688999999988 7999999999999999999
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+|||||++|+|.++++
T Consensus 101 lv~E~~~gg~L~~~l~ 116 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQ 116 (353)
T ss_dssp EEEECCCSCBHHHHHH
T ss_pred EEEeCCCCCcHHHHHH
Confidence 9999999999998874
No 238
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.10 E-value=2.6e-10 Score=119.42 Aligned_cols=89 Identities=22% Similarity=0.370 Sum_probs=78.0
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcc------cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (713)
+.|...+.||+|+||.||+|... +|+.||||.+...... ..+++.+|+.++.+++||||+++++++...+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 35778899999999999999864 5899999998754321 3567999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||+++|+|.+++.
T Consensus 92 lv~e~~~~~~L~~~l~ 107 (321)
T 2a2a_A 92 LILELVSGGELFDFLA 107 (321)
T ss_dssp EEECCCCSCBHHHHHH
T ss_pred EEEEcCCCCcHHHHHH
Confidence 9999999999999875
No 239
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.10 E-value=1.4e-10 Score=123.49 Aligned_cols=89 Identities=25% Similarity=0.365 Sum_probs=78.4
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
++|...+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 46788899999999999999865 588999999976432 2346799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.++++
T Consensus 113 ~~~~~L~~~l~ 123 (360)
T 3eqc_A 113 MDGGSLDQVLK 123 (360)
T ss_dssp CTTCBHHHHHH
T ss_pred CCCCCHHHHHH
Confidence 99999999875
No 240
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.09 E-value=1e-10 Score=123.19 Aligned_cols=91 Identities=23% Similarity=0.564 Sum_probs=77.5
Q ss_pred hhcCcccccccccCCcEEEEEEEec--------CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCcccceEEEEEe
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~--------~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 691 (713)
..++|...+.||+|+||.||+|... ++..||||++..... ...+++.+|++++.++ +||||++++++|..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3467888899999999999999863 467899999976432 3346799999999999 99999999999998
Q ss_pred CCeEEEEEecCCCCCHHHHhh
Q 005120 692 EGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 692 ~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
.+..++||||+++|+|.++++
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~ 133 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLR 133 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHH
T ss_pred CCceEEEEECCCCCcHHHHHH
Confidence 889999999999999999985
No 241
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.09 E-value=2.1e-10 Score=119.26 Aligned_cols=89 Identities=28% Similarity=0.476 Sum_probs=76.1
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
.+|...+.||+|+||.||+|.. .+|+.||||++.... ....+++.+|+.++++++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4688889999999999999985 468999999997532 223457999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.+++.
T Consensus 112 e~~~~~~L~~~l~ 124 (310)
T 2wqm_A 112 ELADAGDLSRMIK 124 (310)
T ss_dssp ECCCSCBHHHHHH
T ss_pred ecCCCCCHHHHHH
Confidence 9999999999874
No 242
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.09 E-value=2e-10 Score=118.84 Aligned_cols=89 Identities=30% Similarity=0.484 Sum_probs=73.8
Q ss_pred cCcccccccccCCcEEEEEEEe-----cCCCEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCcccceEEEEEeC--CeE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 695 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-----~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 695 (713)
+.|...+.||+|+||.||+|.+ ..++.||||++.... ....+.+.+|++++.+++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3477788999999999999984 357899999997543 23346799999999999999999999999876 668
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
++||||+++|+|.++++
T Consensus 101 ~lv~e~~~~~~L~~~l~ 117 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLP 117 (302)
T ss_dssp EEEEECCTTCBHHHHHH
T ss_pred EEEEEeCCCCcHHHHHH
Confidence 99999999999999873
No 243
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.09 E-value=7.3e-11 Score=124.81 Aligned_cols=94 Identities=27% Similarity=0.510 Sum_probs=78.4
Q ss_pred HHHhhcCcccccccccCCcEEEEEEEe------cCCCEEEEEEeccCC-cccHHHHHHHHHHHhhC-CCCcccceEEEEE
Q 005120 619 MALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 690 (713)
Q Consensus 619 ~~~~~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~ 690 (713)
+....++|...+.||+|+||.||+|.. ..+..||||++.... ....+.+.+|+.++.++ +||||+++++++.
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 344567788899999999999999985 235689999997542 22346799999999999 9999999999999
Q ss_pred eCCeEEEEEecCCCCCHHHHhh
Q 005120 691 EEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 691 ~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
..+..++||||+++|+|.++++
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~ 141 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLR 141 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHH
T ss_pred eCCccEEEEecCCCCcHHHHHh
Confidence 8899999999999999999985
No 244
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.09 E-value=1.3e-10 Score=122.97 Aligned_cols=92 Identities=20% Similarity=0.325 Sum_probs=77.8
Q ss_pred HhhcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeE
Q 005120 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (713)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 695 (713)
...++|...+.||+|+||.||+|... +|+.||||+++... ....+.+.+|..++..+ +|||||++++++...+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34567888999999999999999975 58899999997532 12345678899999877 999999999999999999
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
|+||||+++|+|.++++
T Consensus 94 ~lv~E~~~gg~L~~~l~ 110 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQ 110 (345)
T ss_dssp EEEEECCTTCBHHHHHH
T ss_pred EEEEeCCCCCcHHHHHH
Confidence 99999999999999874
No 245
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.09 E-value=1.7e-10 Score=120.64 Aligned_cols=89 Identities=30% Similarity=0.534 Sum_probs=64.0
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
.++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++|||||++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 346778899999999999999854 589999999975432 234678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|++ |+|.+++.
T Consensus 84 ~~~-~~L~~~l~ 94 (317)
T 2pmi_A 84 FMD-NDLKKYMD 94 (317)
T ss_dssp CCC-CBHHHHHH
T ss_pred ecC-CCHHHHHH
Confidence 999 69998874
No 246
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.09 E-value=8e-11 Score=123.32 Aligned_cols=94 Identities=26% Similarity=0.426 Sum_probs=71.0
Q ss_pred HHHhhcCcccccccccCCcEEEEEEEecC-C---CEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCcccceEEEEEeC
Q 005120 619 MALATNNFNSSTQIGQGGYGKVYKGILPD-G---TVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (713)
Q Consensus 619 ~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~-g---~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 692 (713)
.....++|...+.||+|+||.||+|.... + ..||||++.... ....++|.+|++++++++||||+++++++...
T Consensus 18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 33455678889999999999999998644 2 279999997642 23356799999999999999999999999876
Q ss_pred CeE------EEEEecCCCCCHHHHhh
Q 005120 693 GEQ------MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 693 ~~~------~lV~Ey~~~GsL~~~L~ 712 (713)
+.. ++||||+++|+|.+++.
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~ 123 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLL 123 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHH
T ss_pred ccccCCCccEEEEEeccCCcHHHHHH
Confidence 654 99999999999999874
No 247
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.09 E-value=1.6e-10 Score=122.64 Aligned_cols=89 Identities=21% Similarity=0.340 Sum_probs=77.7
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
++|...+.||+|+||.||++... +|+.||||++.... ....+.+.+|+.++.+++||||+++++++...+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 45778899999999999999964 58999999986532 123467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 121 e~~~gg~L~~~l~ 133 (350)
T 1rdq_E 121 EYVAGGEMFSHLR 133 (350)
T ss_dssp ECCTTCBHHHHHH
T ss_pred cCCCCCcHHHHHH
Confidence 9999999999875
No 248
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.09 E-value=1.1e-10 Score=125.44 Aligned_cols=90 Identities=24% Similarity=0.525 Sum_probs=77.0
Q ss_pred hcCcccccccccCCcEEEEEEEec--------CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCcccceEEEEEeC
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~--------~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 692 (713)
.++|...+.||+|+||.||+|... .+..||||++..... ...+++.+|++++.++ +|||||+++++|...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 456778899999999999999852 235799999976433 2346799999999999 999999999999998
Q ss_pred CeEEEEEecCCCCCHHHHhh
Q 005120 693 GEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~ 712 (713)
+..++||||+++|+|.++++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~ 167 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQ 167 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHH
T ss_pred CceEEEEEecCCCcHHHHHH
Confidence 99999999999999999875
No 249
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.09 E-value=1.6e-10 Score=124.77 Aligned_cols=89 Identities=27% Similarity=0.431 Sum_probs=76.6
Q ss_pred cCcccccccccCCcEEEEEEEecC-CCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCC--eEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~ 699 (713)
+.|...+.||+|+||.||+|.... |+.||||++..... ...+.+.+|++++++++|||||++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 457778999999999999999654 89999999975432 33567889999999999999999999998755 679999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 89 e~~~~g~L~~~l~ 101 (396)
T 4eut_A 89 EFCPCGSLYTVLE 101 (396)
T ss_dssp CCCTTEEHHHHTT
T ss_pred ecCCCCCHHHHHH
Confidence 9999999999875
No 250
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.08 E-value=1.2e-10 Score=124.97 Aligned_cols=89 Identities=25% Similarity=0.377 Sum_probs=77.5
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
++|...+.||+|+||.||++... +|+.||||++.... ....+.+.+|+.++.+++|||||++++++...+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45778899999999999999864 48899999986432 223467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 95 e~~~gg~L~~~l~ 107 (384)
T 4fr4_A 95 DLLLGGDLRYHLQ 107 (384)
T ss_dssp CCCTTEEHHHHHH
T ss_pred ecCCCCcHHHHHH
Confidence 9999999999875
No 251
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.08 E-value=1.8e-10 Score=119.14 Aligned_cols=85 Identities=26% Similarity=0.496 Sum_probs=71.4
Q ss_pred cCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhh--CCCCcccceEEEEEeCC----eEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEEG----EQML 697 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~l 697 (713)
++|...+.||+|+||.||+|.. +|+.||||++... ..+++.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 4577889999999999999987 4889999998643 34578889888887 79999999999998765 7899
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
||||+++|+|.++++
T Consensus 79 v~e~~~~g~L~~~l~ 93 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLN 93 (303)
T ss_dssp EEECCTTCCHHHHHH
T ss_pred EEeccCCCCHHHHHh
Confidence 999999999999874
No 252
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.08 E-value=1.6e-10 Score=121.22 Aligned_cols=89 Identities=34% Similarity=0.572 Sum_probs=76.1
Q ss_pred cCcccccccccCCcEEEEEEEe-----cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCC--eEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQM 696 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~ 696 (713)
++|...+.||+|+||.||++.+ .+|+.||||++........+.|.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4577788999999999999984 358899999998765555678999999999999999999999986543 679
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||+++|+|.++++
T Consensus 121 lv~e~~~~~~L~~~l~ 136 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQ 136 (326)
T ss_dssp EEECCCTTCBHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 9999999999999875
No 253
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.08 E-value=2.6e-10 Score=116.37 Aligned_cols=90 Identities=27% Similarity=0.371 Sum_probs=78.2
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
.++|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 356788899999999999999975 68999999986532 12345789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.+++.
T Consensus 90 ~e~~~~~~L~~~l~ 103 (276)
T 2h6d_A 90 MEYVSGGELFDYIC 103 (276)
T ss_dssp EECCCSCBHHHHHH
T ss_pred EeccCCCcHHHHHh
Confidence 99999999999874
No 254
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.08 E-value=3e-10 Score=126.85 Aligned_cols=90 Identities=24% Similarity=0.392 Sum_probs=75.3
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc-------------ccHHHHHHHHHHHhhCCCCcccceEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-------------QGEKEFLTEIQFLSRLHHRNLVSLVGY 688 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~niv~l~g~ 688 (713)
.+.|...+.||+|+||.||+|... .++.||||++..... ...+++.+|+.++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 456888899999999999999964 478999999875321 224578999999999999999999999
Q ss_pred EEeCCeEEEEEecCCCCCHHHHhh
Q 005120 689 CDEEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 689 ~~~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
|...+..|+|||||++|+|.+++.
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~ 138 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQII 138 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHH
T ss_pred EEcCCEEEEEEecCCCCcHHHHHH
Confidence 999999999999999999998874
No 255
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.08 E-value=9.8e-11 Score=121.84 Aligned_cols=84 Identities=32% Similarity=0.543 Sum_probs=73.0
Q ss_pred cCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecCC
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (713)
++|...+.||+|+||.||+|.. .++.||||++.... ..+.|.+|++++++++||||++++|++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 4577788999999999999987 47889999996532 3567999999999999999999999886 45789999999
Q ss_pred CCCHHHHhh
Q 005120 704 NGTLRDQLS 712 (713)
Q Consensus 704 ~GsL~~~L~ 712 (713)
+|+|.++++
T Consensus 83 ~~~L~~~l~ 91 (307)
T 2eva_A 83 GGSLYNVLH 91 (307)
T ss_dssp TCBHHHHHH
T ss_pred CCCHHHHHh
Confidence 999999986
No 256
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.07 E-value=3.3e-10 Score=116.09 Aligned_cols=90 Identities=22% Similarity=0.422 Sum_probs=77.7
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
.++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 357888899999999999999864 588999999865432 23457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.+++.
T Consensus 85 e~~~~~~l~~~~~ 97 (284)
T 3kk8_A 85 DLVTGGELFEDIV 97 (284)
T ss_dssp CCCCSCBHHHHHH
T ss_pred ecCCCCCHHHHHH
Confidence 9999999988763
No 257
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.07 E-value=1.4e-10 Score=126.85 Aligned_cols=90 Identities=21% Similarity=0.397 Sum_probs=76.2
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
.++|...+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|++++++++|||||++++++...+..|+||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 34688889999999999999985 4688999999976443 23456899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
|||++|+|.+++.
T Consensus 90 E~~~gg~L~~~i~ 102 (444)
T 3soa_A 90 DLVTGGELFEDIV 102 (444)
T ss_dssp CCCBCCBHHHHHH
T ss_pred EeCCCCCHHHHHH
Confidence 9999999998764
No 258
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.07 E-value=3.1e-10 Score=118.11 Aligned_cols=89 Identities=30% Similarity=0.464 Sum_probs=77.0
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
++|...+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++.+++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 46788899999999999999975 4899999998654332 24568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|+++|+|.++++
T Consensus 83 ~~~~~~l~~~~~ 94 (311)
T 4agu_A 83 YCDHTVLHELDR 94 (311)
T ss_dssp CCSEEHHHHHHH
T ss_pred eCCCchHHHHHh
Confidence 999999988764
No 259
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.07 E-value=3.6e-10 Score=118.10 Aligned_cols=87 Identities=30% Similarity=0.511 Sum_probs=74.5
Q ss_pred cccccccccCCcEEEEEEEec-----CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeC--CeEEE
Q 005120 626 FNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 697 (713)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-----~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l 697 (713)
|...+.||+|+||.||++.+. +|+.||||++..... ...+.|.+|++++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 477889999999999998753 578999999976432 3346799999999999999999999999874 57899
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
||||+++|+|.++++
T Consensus 113 v~e~~~~~~L~~~l~ 127 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLP 127 (318)
T ss_dssp EECCCTTCBHHHHGG
T ss_pred EEecccCCcHHHHHh
Confidence 999999999999875
No 260
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.07 E-value=1.6e-10 Score=118.07 Aligned_cols=89 Identities=22% Similarity=0.434 Sum_probs=77.5
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
++|...+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 4677889999999999999986 4689999999964321 22367899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 91 e~~~~~~L~~~l~ 103 (278)
T 3cok_A 91 EMCHNGEMNRYLK 103 (278)
T ss_dssp ECCTTEEHHHHHH
T ss_pred ecCCCCcHHHHHh
Confidence 9999999999875
No 261
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.07 E-value=2.1e-10 Score=130.93 Aligned_cols=81 Identities=30% Similarity=0.548 Sum_probs=70.7
Q ss_pred ccccCCcEEEEEEEec---CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecCCCCC
Q 005120 631 QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (713)
Q Consensus 631 ~iG~G~fg~Vy~~~~~---~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~Gs 706 (713)
.||+|+||.||+|.+. ++..||||+++.... ...++|.+|+++|++++|||||+++|+|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999864 456799999976533 345789999999999999999999999975 56899999999999
Q ss_pred HHHHhh
Q 005120 707 LRDQLS 712 (713)
Q Consensus 707 L~~~L~ 712 (713)
|.++|+
T Consensus 422 L~~~l~ 427 (613)
T 2ozo_A 422 LHKFLV 427 (613)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999985
No 262
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.07 E-value=2.2e-10 Score=123.38 Aligned_cols=90 Identities=22% Similarity=0.319 Sum_probs=76.2
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcc---cHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 697 (713)
.++|...++||+|+||.||++... +++.||||+++..... ..+.+.+|..++.++ +|||||++++++...+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 356888899999999999999965 4789999999754222 223578999999887 89999999999999999999
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
|||||++|+|.++++
T Consensus 131 V~E~~~gg~L~~~l~ 145 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQ 145 (396)
T ss_dssp EEECCTTCBHHHHHH
T ss_pred EEEcCCCCcHHHHHH
Confidence 999999999998874
No 263
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.06 E-value=3.9e-10 Score=118.34 Aligned_cols=81 Identities=23% Similarity=0.332 Sum_probs=72.2
Q ss_pred ccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCC-CCcccceEEEEEeCCeEEEEEecCCCCC
Q 005120 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (713)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~Gs 706 (713)
.+.||+|+||.||+|... +|+.||||++... ....+.+|+.++.+++ |||||++++++...+..|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999964 5899999999643 3457889999999997 9999999999999999999999999999
Q ss_pred HHHHhh
Q 005120 707 LRDQLS 712 (713)
Q Consensus 707 L~~~L~ 712 (713)
|.++++
T Consensus 93 L~~~l~ 98 (325)
T 3kn6_A 93 LFERIK 98 (325)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 264
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.06 E-value=1.3e-10 Score=120.24 Aligned_cols=89 Identities=29% Similarity=0.448 Sum_probs=71.1
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcc--------------------------cHHHHHHHHHHHh
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--------------------------GEKEFLTEIQFLS 675 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~--------------------------~~~~f~~E~~~l~ 675 (713)
.++|...+.||+|+||.||+|.. .+|+.||||++...... ..++|.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 35688889999999999999985 45889999998654211 1246899999999
Q ss_pred hCCCCcccceEEEEEe--CCeEEEEEecCCCCCHHHHh
Q 005120 676 RLHHRNLVSLVGYCDE--EGEQMLVYEFMSNGTLRDQL 711 (713)
Q Consensus 676 ~l~H~niv~l~g~~~~--~~~~~lV~Ey~~~GsL~~~L 711 (713)
+++||||+++++++.. .+..|+||||+++|+|.+++
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 129 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh
Confidence 9999999999999986 56789999999999987654
No 265
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.06 E-value=3e-10 Score=117.18 Aligned_cols=89 Identities=18% Similarity=0.303 Sum_probs=77.0
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
++|...+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 45778899999999999999965 47899999986532 223457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.+++.
T Consensus 95 e~~~~~~L~~~~~ 107 (294)
T 2rku_A 95 ELCRRRSLLELHK 107 (294)
T ss_dssp ECCTTCBHHHHHH
T ss_pred ecCCCCCHHHHHH
Confidence 9999999998764
No 266
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.06 E-value=3.5e-10 Score=116.83 Aligned_cols=90 Identities=23% Similarity=0.317 Sum_probs=77.3
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc---------ccHHHHHHHHHHHhhCC-CCcccceEEEEEe
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---------QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE 691 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~---------~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~ 691 (713)
.++|...+.||+|+||.||+|... +|+.||||.+..... ...+.+.+|++++.+++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 457888899999999999999864 588999999965431 11346889999999995 9999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHhh
Q 005120 692 EGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 692 ~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
.+..++||||+++|+|.++++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~ 116 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLT 116 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHH
T ss_pred CCeEEEEEeccCCCcHHHHHh
Confidence 999999999999999999875
No 267
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.06 E-value=1.4e-10 Score=121.85 Aligned_cols=90 Identities=31% Similarity=0.535 Sum_probs=75.1
Q ss_pred hcCcccccccccCCcEEEEEEEe------cCCCEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 695 (713)
.++|...+.||+|+||.||+|.. .++..||||++.... ....++|.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 45688889999999999999984 246789999996542 23456799999999999999999999999988889
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
|+||||+++|+|.++++
T Consensus 109 ~lv~e~~~~~~L~~~l~ 125 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLR 125 (327)
T ss_dssp EEEEECCTTEEHHHHHH
T ss_pred EEEEecCCCCcHHHHHH
Confidence 99999999999999885
No 268
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.06 E-value=2.3e-10 Score=128.35 Aligned_cols=90 Identities=28% Similarity=0.440 Sum_probs=78.4
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
.++|...++||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++.+++|||||++++++...+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456888899999999999999864 58999999996532 22345689999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
||||++|+|.++++
T Consensus 263 mEy~~gg~L~~~l~ 276 (576)
T 2acx_A 263 LTLMNGGDLKFHIY 276 (576)
T ss_dssp ECCCCSCBHHHHHH
T ss_pred EEcCCCCcHHHHHH
Confidence 99999999999875
No 269
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.06 E-value=2.6e-10 Score=117.37 Aligned_cols=88 Identities=27% Similarity=0.446 Sum_probs=76.4
Q ss_pred cCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
++|...+.||+|+||.||+|....|+.||||++...... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 357778999999999999999877999999999654322 236789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++ +|.+++.
T Consensus 82 ~~~-~l~~~~~ 91 (288)
T 1ob3_A 82 LDQ-DLKKLLD 91 (288)
T ss_dssp CSE-EHHHHHH
T ss_pred cCC-CHHHHHH
Confidence 995 8888764
No 270
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.06 E-value=3.3e-10 Score=117.94 Aligned_cols=90 Identities=19% Similarity=0.311 Sum_probs=78.3
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCccc---HHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
.++|...+.||+|+||.||+|... +++.||||++....... .+.+.+|+.++.+++||||+++++++...+..|+|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 357888899999999999999864 58899999997543222 36789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.++++
T Consensus 113 ~e~~~~~~L~~~l~ 126 (309)
T 2h34_A 113 MRLINGVDLAAMLR 126 (309)
T ss_dssp EECCCCEEHHHHHH
T ss_pred EEecCCCCHHHHHH
Confidence 99999999999875
No 271
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.06 E-value=2.2e-10 Score=117.26 Aligned_cols=90 Identities=26% Similarity=0.461 Sum_probs=77.2
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
.++|...+.||+|+||.||+|... ++..||||++..... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 456888899999999999999864 477999999864321 2245789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.+++.
T Consensus 88 ~e~~~~~~l~~~l~ 101 (279)
T 3fdn_A 88 LEYAPLGTVYRELQ 101 (279)
T ss_dssp ECCCTTEEHHHHHH
T ss_pred EecCCCCcHHHHHH
Confidence 99999999998874
No 272
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.05 E-value=8.9e-11 Score=122.36 Aligned_cols=89 Identities=25% Similarity=0.284 Sum_probs=75.1
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCccc---HHHHHHHHHHHhhCCCCcccceEEEEEeCC----eE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----EQ 695 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~ 695 (713)
+.|...+.||+|+||.||+|.. .+++.||||++....... .+.|.+|++++.+++|||||++++++.... ..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5688889999999999999985 568899999997643322 356899999999999999999999986543 34
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
|+||||+++|+|.++++
T Consensus 92 ~lv~e~~~g~~L~~~l~ 108 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVH 108 (311)
T ss_dssp EEEEECCCEEEHHHHHH
T ss_pred EEEEecCCCCCHHHHHH
Confidence 99999999999999875
No 273
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.05 E-value=1.8e-10 Score=127.05 Aligned_cols=89 Identities=26% Similarity=0.381 Sum_probs=77.8
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46778899999999999999864 689999999965321 22457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.+++.
T Consensus 96 E~~~gg~L~~~l~ 108 (476)
T 2y94_A 96 EYVSGGELFDYIC 108 (476)
T ss_dssp ECCSSEEHHHHTT
T ss_pred eCCCCCcHHHHHH
Confidence 9999999999875
No 274
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.05 E-value=2.6e-10 Score=120.93 Aligned_cols=87 Identities=30% Similarity=0.472 Sum_probs=74.6
Q ss_pred CcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcc---cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
.|...+.||+|+||.||+|.. .+|+.||||++...... ..++|.+|++++++++|||||++++++...+..++|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 477778999999999999985 56899999999754332 23578999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|++ |+|.+++.
T Consensus 135 ~~~-g~l~~~l~ 145 (348)
T 1u5q_A 135 YCL-GSASDLLE 145 (348)
T ss_dssp CCS-EEHHHHHH
T ss_pred cCC-CCHHHHHH
Confidence 998 68887763
No 275
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.05 E-value=4.3e-10 Score=116.57 Aligned_cols=89 Identities=25% Similarity=0.401 Sum_probs=78.3
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
+.|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4577889999999999999985 4588999999975432 3457799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.++++
T Consensus 102 ~~~~~L~~~~~ 112 (303)
T 3a7i_A 102 LGGGSALDLLE 112 (303)
T ss_dssp CTTEEHHHHHT
T ss_pred CCCCcHHHHHh
Confidence 99999999875
No 276
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.05 E-value=2.2e-10 Score=120.63 Aligned_cols=89 Identities=30% Similarity=0.545 Sum_probs=75.7
Q ss_pred cCcccccccccCCcEEEEEEEecC-----CCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-----g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
..|...+.||+|+||.||+|.... +..||||++..... ....+|.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456667899999999999998643 23699999976432 234579999999999999999999999998899999
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
||||+++|+|.++++
T Consensus 124 v~e~~~~~~L~~~l~ 138 (333)
T 1mqb_A 124 ITEYMENGALDKFLR 138 (333)
T ss_dssp EEECCTTEEHHHHHH
T ss_pred EEeCCCCCcHHHHHH
Confidence 999999999999874
No 277
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.05 E-value=2.6e-10 Score=121.76 Aligned_cols=89 Identities=20% Similarity=0.315 Sum_probs=76.4
Q ss_pred HhhcCcccccccccCCcEEEEEEE------ecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCC---CCcccceEEEEEe
Q 005120 621 LATNNFNSSTQIGQGGYGKVYKGI------LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDE 691 (713)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~------~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~ 691 (713)
...+.|...+.||+|+||.||+|. ...++.||||++... ...+|.+|++++.+++ |+||+++++++..
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 345678888999999999999994 446889999999754 3457888888888887 9999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHhh
Q 005120 692 EGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 692 ~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
.+..|+|||||++|+|.++++
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~ 159 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAIN 159 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHH
T ss_pred CCCcEEEEeccCCCcHHHHHH
Confidence 999999999999999999985
No 278
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.05 E-value=3.6e-10 Score=125.79 Aligned_cols=89 Identities=24% Similarity=0.391 Sum_probs=73.5
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
+.|...+.||+|+||.||+|... .+..||||++.... ....+.+.+|+.++++++|||||+++++|...+..|+|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 35778899999999999999864 58899999997543 2234679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
||++|+|.+++.
T Consensus 117 ~~~~g~L~~~~~ 128 (494)
T 3lij_A 117 CYKGGELFDEII 128 (494)
T ss_dssp CCCSCBHHHHHH
T ss_pred cCCCCcHHHHHH
Confidence 999999988763
No 279
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.05 E-value=3.4e-10 Score=119.28 Aligned_cols=90 Identities=18% Similarity=0.299 Sum_probs=77.5
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
.++|...+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.++++++|+||+++++++...+..|+|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 346778899999999999999865 47899999986532 22345789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.+++.
T Consensus 120 ~e~~~~~~L~~~~~ 133 (335)
T 2owb_A 120 LELCRRRSLLELHK 133 (335)
T ss_dssp ECCCTTCBHHHHHH
T ss_pred EecCCCCCHHHHHh
Confidence 99999999998764
No 280
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.05 E-value=1.8e-10 Score=119.98 Aligned_cols=99 Identities=26% Similarity=0.528 Sum_probs=81.6
Q ss_pred ccHHHHHHhhcCcccccccccCCcEEEEEEEe------cCCCEEEEEEeccCCc-ccHHHHHHHHHHHhhC-CCCcccce
Q 005120 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSL 685 (713)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l 685 (713)
+...++....++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34455556677899999999999999999974 2467899999976433 2345799999999999 79999999
Q ss_pred EEEEEeCC-eEEEEEecCCCCCHHHHhh
Q 005120 686 VGYCDEEG-EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 686 ~g~~~~~~-~~~lV~Ey~~~GsL~~~L~ 712 (713)
+++|...+ ..++||||+++|+|.++++
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 124 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLR 124 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHH
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHH
Confidence 99997654 5899999999999999885
No 281
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.05 E-value=2.6e-10 Score=116.30 Aligned_cols=89 Identities=27% Similarity=0.388 Sum_probs=77.8
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+..++|+||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 45778899999999999999865 589999999865332 3346799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.++++
T Consensus 87 ~~~~~L~~~l~ 97 (276)
T 2yex_A 87 CSGGELFDRIE 97 (276)
T ss_dssp CTTEEGGGGSB
T ss_pred cCCCcHHHHHh
Confidence 99999998875
No 282
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.04 E-value=4.1e-10 Score=115.10 Aligned_cols=89 Identities=24% Similarity=0.433 Sum_probs=76.4
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEe--CCeEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLV 698 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV 698 (713)
++|...+.||+|+||.||++... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.. .+..++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 46778899999999999999864 589999999975432 234579999999999999999999998864 5678999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.+++.
T Consensus 86 ~e~~~~~~L~~~l~ 99 (279)
T 2w5a_A 86 MEYCEGGDLASVIT 99 (279)
T ss_dssp EECCTTEEHHHHHH
T ss_pred EeCCCCCCHHHHHH
Confidence 99999999999874
No 283
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.04 E-value=4.7e-10 Score=115.31 Aligned_cols=87 Identities=29% Similarity=0.522 Sum_probs=72.8
Q ss_pred Cccccc-ccccCCcEEEEEEEec---CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 625 NFNSST-QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 625 ~~~~~~-~iG~G~fg~Vy~~~~~---~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
+|.... .||+|+||.||+|... ++..||||+++.... ...+++.+|++++.+++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 343444 8999999999999853 577899999976432 3356799999999999999999999999 556789999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.+++.
T Consensus 89 e~~~~~~L~~~l~ 101 (287)
T 1u59_A 89 EMAGGGPLHKFLV 101 (287)
T ss_dssp ECCTTEEHHHHHT
T ss_pred EeCCCCCHHHHHH
Confidence 9999999999884
No 284
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.04 E-value=3e-10 Score=120.54 Aligned_cols=91 Identities=20% Similarity=0.238 Sum_probs=77.9
Q ss_pred hhcCcccccccccCCcEEEEEEEecC-CCEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEE
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 696 (713)
..++|...+.||+|+||.||+|.... |+.||||+++... ....+.+.+|..++..+ +||||+++++++...+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 34678889999999999999999754 7899999997532 12345688999999988 8999999999999999999
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||+++|+|.++++
T Consensus 98 lv~E~~~gg~L~~~l~ 113 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQ 113 (353)
T ss_dssp EEEECCCSCBHHHHHH
T ss_pred EEEeCCCCCcHHHHHH
Confidence 9999999999999875
No 285
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.03 E-value=1.2e-10 Score=128.05 Aligned_cols=90 Identities=26% Similarity=0.275 Sum_probs=69.5
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccC---CcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++.+++||||++++++|...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 35688889999999999999985 45899999999753 222335688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
||||++|+|.++++
T Consensus 227 ~e~~~~~~L~~~l~ 240 (446)
T 4ejn_A 227 MEYANGGELFFHLS 240 (446)
T ss_dssp ECCCSSCBHHHHHH
T ss_pred EeeCCCCcHHHHHH
Confidence 99999999998874
No 286
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.03 E-value=4e-10 Score=125.11 Aligned_cols=89 Identities=26% Similarity=0.452 Sum_probs=78.1
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
+.|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++|||||++++++...+..|+|+
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 35777899999999999999864 68999999996543 234567999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.+++.
T Consensus 106 e~~~~~~L~~~~~ 118 (484)
T 3nyv_A 106 EVYTGGELFDEII 118 (484)
T ss_dssp CCCCSCBHHHHHH
T ss_pred ecCCCCCHHHHHH
Confidence 9999999998874
No 287
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.03 E-value=2.9e-10 Score=117.48 Aligned_cols=88 Identities=26% Similarity=0.421 Sum_probs=75.0
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEe-----------
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----------- 691 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----------- 691 (713)
++|...+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++++++||||+++++++..
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 4578889999999999999986 46899999999642 2234678999999999999999999999865
Q ss_pred --CCeEEEEEecCCCCCHHHHhh
Q 005120 692 --EGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 692 --~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
.+..|+||||+++|+|.++++
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~ 107 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIH 107 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHH
T ss_pred ccCCceEEEEecCCCCCHHHhhh
Confidence 346799999999999999885
No 288
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.03 E-value=1.1e-10 Score=123.63 Aligned_cols=87 Identities=20% Similarity=0.370 Sum_probs=76.8
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCccc-----------------HHHHHHHHHHHhhCCCCcccce
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-----------------EKEFLTEIQFLSRLHHRNLVSL 685 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~-----------------~~~f~~E~~~l~~l~H~niv~l 685 (713)
.++|...+.||+|+||.||+|.. +|+.||||++....... .+.|.+|++++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788889999999999999998 89999999986432111 1789999999999999999999
Q ss_pred EEEEEeCCeEEEEEecCCCCCHHHH
Q 005120 686 VGYCDEEGEQMLVYEFMSNGTLRDQ 710 (713)
Q Consensus 686 ~g~~~~~~~~~lV~Ey~~~GsL~~~ 710 (713)
++++...+..++||||+++|+|.++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~ 133 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKF 133 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHH
Confidence 9999999999999999999999887
No 289
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.03 E-value=2.4e-10 Score=119.09 Aligned_cols=88 Identities=26% Similarity=0.374 Sum_probs=72.4
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc--ccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 699 (713)
++|+..+.||+|+||.||+|... +|+.||||++..... ....++.+|+..+.++ +|||||+++++|...+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 46888899999999999999975 689999999865332 2234566777666666 9999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+ +|+|.+++.
T Consensus 137 e~~-~~~L~~~~~ 148 (311)
T 3p1a_A 137 ELC-GPSLQQHCE 148 (311)
T ss_dssp ECC-CCBHHHHHH
T ss_pred ecc-CCCHHHHHH
Confidence 999 678988764
No 290
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.03 E-value=5.7e-10 Score=115.36 Aligned_cols=86 Identities=26% Similarity=0.455 Sum_probs=71.8
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhh--CCCCcccceEEEEEeC----CeEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEE----GEQM 696 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~----~~~~ 696 (713)
.++|...+.||+|+||.||+|.. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++... ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 35678889999999999999987 6899999998643 34567777777776 7999999999997542 4579
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||+++|+|.++++
T Consensus 83 lv~e~~~~g~L~~~l~ 98 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQ 98 (301)
T ss_dssp EEECCCTTCBHHHHHT
T ss_pred EehhhccCCCHHHHHh
Confidence 9999999999999885
No 291
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.03 E-value=2.4e-10 Score=120.36 Aligned_cols=88 Identities=23% Similarity=0.335 Sum_probs=75.6
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
+.|...+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+.+++.++|||||++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4678889999999999999995 5689999999864321 12357899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+ +|+|.+++.
T Consensus 89 E~~-~g~l~~~l~ 100 (336)
T 3h4j_B 89 EYA-GGELFDYIV 100 (336)
T ss_dssp CCC-CEEHHHHHH
T ss_pred ECC-CCcHHHHHH
Confidence 999 689998874
No 292
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.03 E-value=2.4e-10 Score=124.39 Aligned_cols=89 Identities=22% Similarity=0.396 Sum_probs=73.7
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc--------ccHHHHHHHHHHHhhCCCCcccceEEEEEeCC
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 693 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 693 (713)
.++|...+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++|||||++++++. .+
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~ 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AE 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SS
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence 467888999999999999999864 578999999865321 11124889999999999999999999975 55
Q ss_pred eEEEEEecCCCCCHHHHhh
Q 005120 694 EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~ 712 (713)
..|+|||||++|+|.+++.
T Consensus 213 ~~~lv~e~~~~g~L~~~l~ 231 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVV 231 (419)
T ss_dssp EEEEEEECCTTCBGGGGTS
T ss_pred ceEEEEEcCCCCcHHHHHh
Confidence 6899999999999998874
No 293
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.02 E-value=6.9e-10 Score=114.21 Aligned_cols=88 Identities=28% Similarity=0.419 Sum_probs=73.6
Q ss_pred CcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCcccceEEEEEe----CCeEEE
Q 005120 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQML 697 (713)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~l 697 (713)
.|...+.||+|+||.||+|... ++..||+|.+.... ....+.|.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3566778999999999999864 57899999987532 2334679999999999999999999999865 345899
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
||||+++|+|.++++
T Consensus 107 v~e~~~~~~L~~~l~ 121 (290)
T 1t4h_A 107 VTELMTSGTLKTYLK 121 (290)
T ss_dssp EEECCCSCBHHHHHH
T ss_pred EEEecCCCCHHHHHH
Confidence 999999999999875
No 294
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.02 E-value=5.7e-10 Score=116.23 Aligned_cols=89 Identities=26% Similarity=0.490 Sum_probs=73.5
Q ss_pred hhcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
..+.|...+.||+|+||.||+|... +|+.||||.+.... ..+++.+|+.++.+++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3457888899999999999999875 48999999997643 34679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|+++|+|.++++
T Consensus 105 ~~~~~~L~~~~~ 116 (314)
T 3com_A 105 YCGAGSVSDIIR 116 (314)
T ss_dssp CCTTEEHHHHHH
T ss_pred cCCCCCHHHHHH
Confidence 999999999874
No 295
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.02 E-value=3.3e-10 Score=116.08 Aligned_cols=89 Identities=26% Similarity=0.447 Sum_probs=74.5
Q ss_pred hcCcccccccccCCcEEEEEEEecC----CCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
.++|...+.||+|+||.||+|.... +..||||++..... ...+.|.+|+.++++++||||+++++++ ..+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence 4567788999999999999998643 45799999876432 2345799999999999999999999998 4567899
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
||||+++|+|.++++
T Consensus 93 v~e~~~~~~L~~~l~ 107 (281)
T 1mp8_A 93 IMELCTLGELRSFLQ 107 (281)
T ss_dssp EEECCTTEEHHHHHH
T ss_pred EEecCCCCCHHHHHH
Confidence 999999999999875
No 296
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.02 E-value=1.4e-10 Score=120.03 Aligned_cols=92 Identities=28% Similarity=0.390 Sum_probs=64.6
Q ss_pred HhhcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 621 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
...++|...+.||+|+||.||+|.. .+++.||||++..... ...+++.+|+.++.+++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3456788899999999999999985 4688999999865432 2346789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.++++
T Consensus 92 ~e~~~~~~L~~~l~ 105 (303)
T 2vwi_A 92 MKLLSGGSVLDIIK 105 (303)
T ss_dssp EECCTTCBHHHHHH
T ss_pred ehhccCCchHHHHH
Confidence 99999999999874
No 297
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.02 E-value=4e-10 Score=115.78 Aligned_cols=88 Identities=39% Similarity=0.588 Sum_probs=73.6
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCccc-------HHHHHHHHHHHhhCCCCcccceEEEEEeCCe
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG-------EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~-------~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 694 (713)
.++|...+.||+|+||.||+|.. .+++.||||++....... .++|.+|++++.+++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35688889999999999999986 468999999986543221 157999999999999999999999985544
Q ss_pred EEEEEecCCCCCHHHHhh
Q 005120 695 QMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~ 712 (713)
++||||+++|+|.+++.
T Consensus 97 -~lv~e~~~~~~L~~~l~ 113 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLL 113 (287)
T ss_dssp -EEEEECCTTCBHHHHHH
T ss_pred -eEEEEecCCCCHHHHHh
Confidence 79999999999988874
No 298
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.02 E-value=2.9e-10 Score=117.15 Aligned_cols=89 Identities=28% Similarity=0.441 Sum_probs=72.1
Q ss_pred hcCccccc-ccccCCcEEEEEEEec---CCCEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEE
Q 005120 623 TNNFNSST-QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 623 ~~~~~~~~-~iG~G~fg~Vy~~~~~---~g~~vavK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (713)
...|...+ .||+|+||.||+|... .++.||||++...... ..++|.+|++++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 34566666 8999999999999653 3678999999754322 246799999999999999999999999 567789
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||+++|+|.++++
T Consensus 94 lv~e~~~~~~L~~~l~ 109 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQ 109 (291)
T ss_dssp EEEECCTTEEHHHHHH
T ss_pred EEEEeCCCCCHHHHHH
Confidence 9999999999999875
No 299
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.02 E-value=3.9e-10 Score=129.09 Aligned_cols=82 Identities=29% Similarity=0.478 Sum_probs=70.1
Q ss_pred cccccCCcEEEEEEEec---CCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEecCCC
Q 005120 630 TQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (713)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~---~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (713)
+.||+|+||.||+|.+. .++.||||+++.... ...++|.+|+++|.+++|||||+++|+|. .+..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 47999999999999763 357899999976432 23578999999999999999999999996 4568999999999
Q ss_pred CCHHHHhh
Q 005120 705 GTLRDQLS 712 (713)
Q Consensus 705 GsL~~~L~ 712 (713)
|+|.++|+
T Consensus 454 g~L~~~l~ 461 (635)
T 4fl3_A 454 GPLNKYLQ 461 (635)
T ss_dssp EEHHHHHH
T ss_pred CCHHHHHh
Confidence 99999875
No 300
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.02 E-value=4.7e-10 Score=117.69 Aligned_cols=89 Identities=34% Similarity=0.642 Sum_probs=74.3
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCE--EEEEEeccCC-cccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTV--VAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~--vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 698 (713)
++|...+.||+|+||.||+|... +|.. ||||++.... ....+.+.+|++++.++ +||||+++++++...+..|+|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 45777899999999999999864 4554 5999987532 22345799999999999 999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.++++
T Consensus 105 ~e~~~~~~L~~~l~ 118 (327)
T 1fvr_A 105 IEYAPHGNLLDFLR 118 (327)
T ss_dssp ECCCTTCBHHHHHH
T ss_pred EecCCCCCHHHHHH
Confidence 99999999999985
No 301
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.02 E-value=3.9e-10 Score=115.72 Aligned_cols=89 Identities=25% Similarity=0.452 Sum_probs=76.8
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 45778899999999999999865 47789999986432 122467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.+++.
T Consensus 94 e~~~~~~L~~~l~ 106 (284)
T 2vgo_A 94 EFAPRGELYKELQ 106 (284)
T ss_dssp CCCTTEEHHHHHH
T ss_pred EeCCCCcHHHHHH
Confidence 9999999998874
No 302
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.02 E-value=4e-10 Score=125.95 Aligned_cols=90 Identities=26% Similarity=0.461 Sum_probs=78.2
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
.++|...++||+|+||.||++... +|+.||||++..... ...+.+.+|+.++.+++|||||++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 356788889999999999999975 589999999965321 2345789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
||||++|+|.++++
T Consensus 264 mE~~~gg~L~~~l~ 277 (543)
T 3c4z_A 264 MTIMNGGDIRYHIY 277 (543)
T ss_dssp ECCCTTCBHHHHHH
T ss_pred EEeccCCCHHHHHH
Confidence 99999999999875
No 303
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.02 E-value=3.2e-10 Score=118.77 Aligned_cols=98 Identities=29% Similarity=0.479 Sum_probs=81.7
Q ss_pred ccHHHHHHhhcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCcccceEEEEEe
Q 005120 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (713)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 691 (713)
+++.++....+.|...+.||+|+||.||+|.. .+|+.||||++..... ..+++.+|+.++.++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 34444555677899999999999999999996 4689999999875432 346799999999999 89999999999976
Q ss_pred ------CCeEEEEEecCCCCCHHHHhh
Q 005120 692 ------EGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 692 ------~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
.+..++||||+++|+|.++++
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~ 119 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIK 119 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHH
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHH
Confidence 457899999999999999874
No 304
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.01 E-value=6.7e-10 Score=118.52 Aligned_cols=91 Identities=21% Similarity=0.326 Sum_probs=77.9
Q ss_pred hhcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcc--------cHHHHHHHHHHHhhC-CCCcccceEEEEEe
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~--------~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 691 (713)
..++|...+.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.++.++ +||||+++++++..
T Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 171 (365)
T 2y7j_A 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES 171 (365)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence 3456888899999999999999975 6999999998654311 124578999999999 89999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHhh
Q 005120 692 EGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 692 ~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
.+..|+||||+++|+|.+++.
T Consensus 172 ~~~~~lv~e~~~g~~L~~~l~ 192 (365)
T 2y7j_A 172 SSFMFLVFDLMRKGELFDYLT 192 (365)
T ss_dssp SSEEEEEECCCTTCBHHHHHH
T ss_pred CCEEEEEEEeCCCCcHHHHHH
Confidence 999999999999999999874
No 305
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.01 E-value=3.9e-10 Score=120.14 Aligned_cols=97 Identities=27% Similarity=0.371 Sum_probs=80.6
Q ss_pred cHHHHHHhhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcc-----------cHHHHHHHHHHHhhCCCCccc
Q 005120 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-----------GEKEFLTEIQFLSRLHHRNLV 683 (713)
Q Consensus 615 ~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~niv 683 (713)
...++....+.|...+.||+|+||.||+|...+|+.||||++...... ..+.+.+|++++.+++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 356677788999999999999999999999878999999998542211 126799999999999999999
Q ss_pred ceEEEEEeC-----CeEEEEEecCCCCCHHHHhh
Q 005120 684 SLVGYCDEE-----GEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 684 ~l~g~~~~~-----~~~~lV~Ey~~~GsL~~~L~ 712 (713)
++++++... ...|+||||++ |+|.++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~ 125 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIH 125 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHH
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHH
Confidence 999998653 35799999999 68888764
No 306
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.01 E-value=3.3e-10 Score=119.10 Aligned_cols=89 Identities=26% Similarity=0.487 Sum_probs=74.2
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
.++|...+.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|++++++++|||||++++++...+..++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 45688889999999999999984 46889999999754332 2356889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||++ |+|.++++
T Consensus 113 e~~~-~~L~~~~~ 124 (329)
T 3gbz_A 113 EYAE-NDLKKYMD 124 (329)
T ss_dssp ECCS-EEHHHHHH
T ss_pred ecCC-CCHHHHHh
Confidence 9999 59998874
No 307
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.01 E-value=5.6e-10 Score=123.99 Aligned_cols=89 Identities=25% Similarity=0.406 Sum_probs=77.4
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
+.|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++|||||++++++...+..|+|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 35778899999999999999864 68999999986422 2335679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|+++|+|.+++.
T Consensus 102 ~~~~~~L~~~~~ 113 (486)
T 3mwu_A 102 LYTGGELFDEII 113 (486)
T ss_dssp CCCSCBHHHHHH
T ss_pred cCCCCcHHHHHH
Confidence 999999988763
No 308
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.00 E-value=2.8e-10 Score=121.73 Aligned_cols=89 Identities=26% Similarity=0.385 Sum_probs=68.6
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc---ccHHHHHHHHHH-HhhCCCCcccceEEEEEeCCeEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
++|...+.||+|+||.||++... +++.||||+++.... ...+.+.+|..+ ++.++|||||++++++...+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 46888899999999999999965 478999999976432 223456777776 5778999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++|+|.++++
T Consensus 118 ~E~~~gg~L~~~l~ 131 (373)
T 2r5t_A 118 LDYINGGELFYHLQ 131 (373)
T ss_dssp EECCCSCBHHHHHH
T ss_pred EeCCCCCcHHHHHH
Confidence 99999999998874
No 309
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.00 E-value=4.9e-10 Score=116.81 Aligned_cols=88 Identities=28% Similarity=0.419 Sum_probs=71.0
Q ss_pred cCcccccccccCCcEEEEEEEecC-CCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEE------------
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD------------ 690 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~------------ 690 (713)
+.|...+.||+|+||.||+|.... |+.||||++........+++.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 467888999999999999999754 8899999998766555678999999999999999999999873
Q ss_pred --eCCeEEEEEecCCCCCHHHHhh
Q 005120 691 --EEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 691 --~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
.....++||||++ |+|.++++
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~ 113 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLE 113 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHT
T ss_pred ccccCceeEEeeccC-CCHHHHhh
Confidence 3467899999998 69998875
No 310
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.00 E-value=2.4e-10 Score=122.34 Aligned_cols=87 Identities=34% Similarity=0.569 Sum_probs=72.3
Q ss_pred cccccccccCCcEEEEEEEecC--C--CEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEe-CCeEEEEE
Q 005120 626 FNSSTQIGQGGYGKVYKGILPD--G--TVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQMLVY 699 (713)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~--g--~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~ 699 (713)
|...+.||+|+||.||+|...+ + ..||||.++.... ...++|.+|+.++++++|||||+++++|.. ++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 5566889999999999998632 2 3689999875432 335679999999999999999999999865 45789999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 171 e~~~~g~L~~~l~ 183 (373)
T 3c1x_A 171 PYMKHGDLRNFIR 183 (373)
T ss_dssp ECCTTCBHHHHHH
T ss_pred ECCCCCCHHHHHh
Confidence 9999999999985
No 311
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.00 E-value=7.3e-10 Score=113.89 Aligned_cols=89 Identities=25% Similarity=0.406 Sum_probs=78.0
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
+.|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|+|
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 46888899999999999999865 58899999986532 2345679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|+++|+|.+++.
T Consensus 102 ~~~~~~L~~~l~ 113 (287)
T 2wei_A 102 LYTGGELFDEII 113 (287)
T ss_dssp CCCSCBHHHHHH
T ss_pred ccCCCCHHHHHH
Confidence 999999988763
No 312
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.00 E-value=3.7e-10 Score=115.65 Aligned_cols=85 Identities=29% Similarity=0.507 Sum_probs=73.3
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEe-----------
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----------- 691 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----------- 691 (713)
.+|...+.||+|+||.||+|... +|+.||||++.... +.+.+|++++.+++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 45788899999999999999975 68999999997543 357789999999999999999998854
Q ss_pred -----CCeEEEEEecCCCCCHHHHhh
Q 005120 692 -----EGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 692 -----~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
....++||||+++|+|.++++
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~ 112 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIE 112 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHH
T ss_pred ccccCcceEEEEEeccCCCCHHHHHh
Confidence 345799999999999999884
No 313
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.00 E-value=6.9e-10 Score=114.39 Aligned_cols=87 Identities=29% Similarity=0.466 Sum_probs=73.5
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++.+++|||||++++++...+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 45778899999999999999864 588999999975432 224678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHh
Q 005120 701 FMSNGTLRDQL 711 (713)
Q Consensus 701 y~~~GsL~~~L 711 (713)
|+++ ++.+++
T Consensus 82 ~~~~-~l~~~~ 91 (292)
T 3o0g_A 82 FCDQ-DLKKYF 91 (292)
T ss_dssp CCSE-EHHHHH
T ss_pred cCCC-CHHHHH
Confidence 9986 555443
No 314
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.00 E-value=3.4e-10 Score=115.75 Aligned_cols=87 Identities=36% Similarity=0.572 Sum_probs=74.1
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeC-CeEEEEEec
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-GEQMLVYEF 701 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lV~Ey 701 (713)
.++|...+.||+|+||.||+|.. .|+.||||.++... ..+.|.+|++++.+++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 45678889999999999999987 58899999997543 346799999999999999999999998654 468999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+++|+|.++++
T Consensus 97 ~~~~~L~~~l~ 107 (278)
T 1byg_A 97 MAKGSLVDYLR 107 (278)
T ss_dssp CTTEEHHHHHH
T ss_pred CCCCCHHHHHH
Confidence 99999999874
No 315
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.00 E-value=8.6e-10 Score=112.51 Aligned_cols=88 Identities=24% Similarity=0.389 Sum_probs=65.9
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc---ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
++|...+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 4688889999999999999985 4689999999975432 23457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+ +|+|.+++.
T Consensus 93 e~~-~~~l~~~~~ 104 (275)
T 2eue_A 93 EYA-GNELFDYIV 104 (275)
T ss_dssp ECC-CEEHHHHHH
T ss_pred hhc-CCcHHHHHH
Confidence 999 678887764
No 316
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.99 E-value=7.9e-09 Score=111.40 Aligned_cols=263 Identities=11% Similarity=0.054 Sum_probs=164.3
Q ss_pred CCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCC----------------------ccccCCCCCceE
Q 005120 78 DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIP----------------------KEIGNIKSLELL 135 (713)
Q Consensus 78 ~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p----------------------~~~~~l~~L~~L 135 (713)
..++.+|+.+++..+ ++..-...|.++.+|+.+.+..+ +..... .+|.++++|+.+
T Consensus 90 F~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i 167 (394)
T 4fs7_A 90 FENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYV 167 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCEE
T ss_pred hhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccCccccccchhhhcccCCCcEE
Confidence 345678899988753 55555567777888877766543 222222 345555556665
Q ss_pred ecccCCCCCcCCccCCCCCCCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCc
Q 005120 136 LLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT 215 (713)
Q Consensus 136 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 215 (713)
.+.++. ..+....|.++++|+.+.+..| ++.+....|.++..|+.+.+..+... +.+......+|+.+.+..+ ++
T Consensus 168 ~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~ 242 (394)
T 4fs7_A 168 SLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FT 242 (394)
T ss_dssp ECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CC
T ss_pred ecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ce
Confidence 554332 2244445555566666555544 33344455555555655555544322 2223333455666655433 23
Q ss_pred CCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCcc
Q 005120 216 GYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL 295 (713)
Q Consensus 216 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~ 295 (713)
......+..+..|+.+.+..+... .....|..+..++.+....+.+. ...+..+.+|+.+.+..+ ++ .|+...|
T Consensus 243 ~i~~~~f~~~~~l~~~~~~~~~~~--i~~~~F~~~~~l~~~~~~~~~i~--~~~F~~~~~L~~i~l~~~-i~-~I~~~aF 316 (394)
T 4fs7_A 243 ELGKSVFYGCTDLESISIQNNKLR--IGGSLFYNCSGLKKVIYGSVIVP--EKTFYGCSSLTEVKLLDS-VK-FIGEEAF 316 (394)
T ss_dssp EECSSTTTTCSSCCEEEECCTTCE--ECSCTTTTCTTCCEEEECSSEEC--TTTTTTCTTCCEEEECTT-CC-EECTTTT
T ss_pred ecccccccccccceeEEcCCCcce--eeccccccccccceeccCceeec--cccccccccccccccccc-cc-eechhhh
Confidence 334456777888898888877543 34556788888988887765432 125777889999998765 55 5666656
Q ss_pred c--cCccEEEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCC
Q 005120 296 S--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNN 360 (713)
Q Consensus 296 ~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N 360 (713)
. .+|+.++|.++ ++..-..+|.++.+|+.+++..| ++..-..+|. .+.+|+.+++..+
T Consensus 317 ~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~-----~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 317 ESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQ-----GCINLKKVELPKR 376 (394)
T ss_dssp TTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBT-----TCTTCCEEEEEGG
T ss_pred cCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhh-----CCCCCCEEEECCC
Confidence 5 68999999754 77666788999999999999877 6633344555 6788899988754
No 317
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=98.99 E-value=2.8e-10 Score=120.99 Aligned_cols=89 Identities=27% Similarity=0.396 Sum_probs=76.5
Q ss_pred cCcccccccccCCcEEEEEEEe----cCCCEEEEEEeccCCc----ccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 694 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~----~~g~~vavK~l~~~~~----~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 694 (713)
++|...+.||+|+||.||++.. .+|+.||||+++.... ...+.+.+|++++.++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 4688889999999999999986 3689999999865321 2234678899999999 69999999999999999
Q ss_pred EEEEEecCCCCCHHHHhh
Q 005120 695 QMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~ 712 (713)
.++||||+++|+|.++++
T Consensus 134 ~~lv~e~~~~~~L~~~l~ 151 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLS 151 (355)
T ss_dssp EEEEECCCCSCBHHHHHH
T ss_pred EEEEeecCCCCCHHHHHH
Confidence 999999999999999875
No 318
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=98.99 E-value=2.8e-10 Score=118.53 Aligned_cols=95 Identities=28% Similarity=0.490 Sum_probs=73.9
Q ss_pred HHHHHhhcCcccccccccCCcEEEEEEEecC----CCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEE
Q 005120 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690 (713)
Q Consensus 617 ~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~----g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 690 (713)
.++....++|...+.||+|+||.||+|.... +..||||++..... ...+.|.+|+.++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 3444556678888999999999999998642 45899999875432 23467999999999999999999999997
Q ss_pred eCC-----eEEEEEecCCCCCHHHHh
Q 005120 691 EEG-----EQMLVYEFMSNGTLRDQL 711 (713)
Q Consensus 691 ~~~-----~~~lV~Ey~~~GsL~~~L 711 (713)
..+ ..++||||+++|+|.+++
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l 132 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYL 132 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHH
T ss_pred eccccCCcccEEEEecccCCCHHHHH
Confidence 654 349999999999999987
No 319
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=98.99 E-value=6.2e-10 Score=117.65 Aligned_cols=86 Identities=27% Similarity=0.391 Sum_probs=73.9
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEEEEe
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E 700 (713)
.++|...+.||+|+||.||++... +|+.||||++..... ++.+|++++.++ +|||||++++++...+..|+|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 345788899999999999999864 588999999976533 245688888888 89999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|+++|+|.+++.
T Consensus 97 ~~~gg~L~~~i~ 108 (342)
T 2qr7_A 97 LMKGGELLDKIL 108 (342)
T ss_dssp CCCSCBHHHHHH
T ss_pred CCCCCcHHHHHH
Confidence 999999999874
No 320
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=98.99 E-value=4.6e-10 Score=117.52 Aligned_cols=88 Identities=25% Similarity=0.410 Sum_probs=71.8
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc--------ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 694 (713)
++|...+.||+|+||.||+|... +++.||||.+..... .....+.+|++++.+++||||+++++++...+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 45788899999999999999864 478999999865321 11235889999999999999999999987554
Q ss_pred EEEEEecCCCCCHHHHhh
Q 005120 695 QMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~ 712 (713)
.|+||||+++|+|.+++.
T Consensus 89 ~~lv~e~~~~~~L~~~~~ 106 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVV 106 (322)
T ss_dssp EEEEEECCTTEETHHHHS
T ss_pred eEEEEecCCCCcHHHHHh
Confidence 899999999999998874
No 321
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=98.98 E-value=6.2e-10 Score=116.86 Aligned_cols=88 Identities=28% Similarity=0.543 Sum_probs=69.4
Q ss_pred cCcccccccccCCcEEEEEEEec-CCC----EEEEEEeccCC-cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~----~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
++|...+.||+|+||.||+|... +|+ .||+|.+.... ....++|.+|+.++++++|||||+++++|... ..++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence 45778899999999999999853 344 46888886432 23457899999999999999999999999865 4789
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
|+||+++|+|.++++
T Consensus 94 v~e~~~~g~L~~~l~ 108 (327)
T 3poz_A 94 ITQLMPFGCLLDYVR 108 (327)
T ss_dssp EEECCTTCBHHHHHH
T ss_pred EEEecCCCcHHHHHH
Confidence 999999999999875
No 322
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=98.98 E-value=5.8e-10 Score=118.65 Aligned_cols=99 Identities=19% Similarity=0.267 Sum_probs=83.5
Q ss_pred ccccHHHHHHhhcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCC-----CCcccce
Q 005120 612 RSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----HRNLVSL 685 (713)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-----H~niv~l 685 (713)
..+++.+.....++|...+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++.+++ |||||++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 3455555566678899999999999999999986 46889999999743 223456888999999986 9999999
Q ss_pred EEEEEeCCeEEEEEecCCCCCHHHHhh
Q 005120 686 VGYCDEEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 686 ~g~~~~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
++++...+..++||||+ +|+|.+++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~ 127 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIIT 127 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHH
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHH
Confidence 99999999999999999 899999874
No 323
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=98.98 E-value=7.5e-10 Score=116.38 Aligned_cols=88 Identities=32% Similarity=0.521 Sum_probs=76.2
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
++|...+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++.+++||||++++++|...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 45778899999999999999965 4899999998654332 23568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHh
Q 005120 701 FMSNGTLRDQL 711 (713)
Q Consensus 701 y~~~GsL~~~L 711 (713)
|+++|+|.+++
T Consensus 105 ~~~~~~l~~~~ 115 (331)
T 4aaa_A 105 FVDHTILDDLE 115 (331)
T ss_dssp CCSEEHHHHHH
T ss_pred cCCcchHHHHH
Confidence 99999988765
No 324
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=98.98 E-value=6e-10 Score=115.09 Aligned_cols=89 Identities=33% Similarity=0.506 Sum_probs=73.1
Q ss_pred cCcccccccccCCcEEEEEEEecC----CCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEe-CCeEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQML 697 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~l 697 (713)
..|...+.||+|+||.||+|...+ +..||||.+..... ...+.|.+|+.++++++||||++++++|.. ++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 346777899999999999998643 23689999876433 334679999999999999999999999754 457899
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
||||+++|+|.++++
T Consensus 105 v~e~~~~~~L~~~l~ 119 (298)
T 3f66_A 105 VLPYMKHGDLRNFIR 119 (298)
T ss_dssp EEECCTTCBHHHHHH
T ss_pred EEeCCCCCCHHHHHH
Confidence 999999999999985
No 325
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=98.97 E-value=1e-09 Score=113.32 Aligned_cols=88 Identities=33% Similarity=0.541 Sum_probs=73.7
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 46788899999999999999865 689999999865432 223678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|++ |+|.+++.
T Consensus 83 ~~~-~~L~~~~~ 93 (299)
T 2r3i_A 83 FLH-QDLKKFMD 93 (299)
T ss_dssp CCS-EEHHHHHH
T ss_pred ccc-CCHHHHHH
Confidence 998 69988874
No 326
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=98.97 E-value=8.2e-10 Score=113.08 Aligned_cols=89 Identities=26% Similarity=0.525 Sum_probs=74.2
Q ss_pred hcCcccccccccCCcEEEEEEEecC----CCEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~----g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
.++|...+.||+|+||.||+|.... +..||||.+.... ....+.|.+|+.++++++||||+++++++.. +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4568888999999999999998643 2369999997653 2345679999999999999999999999864 45689
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
||||+++|+|.++++
T Consensus 90 v~e~~~~~~L~~~l~ 104 (281)
T 3cc6_A 90 IMELYPYGELGHYLE 104 (281)
T ss_dssp EEECCTTCBHHHHHH
T ss_pred EEecCCCCCHHHHHH
Confidence 999999999999874
No 327
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=98.97 E-value=8.2e-10 Score=113.99 Aligned_cols=87 Identities=26% Similarity=0.396 Sum_probs=72.2
Q ss_pred cccccccccCCcEEEEEEEecC-C---CEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeE-EEEE
Q 005120 626 FNSSTQIGQGGYGKVYKGILPD-G---TVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ-MLVY 699 (713)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~-g---~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~-~lV~ 699 (713)
|...+.||+|+||.||+|...+ + ..||||.+..... ...+.|.+|+.++++++||||+++++++...+.. ++|+
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 4556889999999999998533 2 3799999976433 3346799999999999999999999999766554 9999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 103 e~~~~~~L~~~~~ 115 (298)
T 3pls_A 103 PYMCHGDLLQFIR 115 (298)
T ss_dssp CCCTTCBHHHHHH
T ss_pred ecccCCCHHHHHh
Confidence 9999999999885
No 328
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=98.96 E-value=1.2e-09 Score=115.28 Aligned_cols=86 Identities=26% Similarity=0.492 Sum_probs=75.0
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhh--CCCCcccceEEEEEeCC----eEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEEG----EQM 696 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~ 696 (713)
.++|...+.||+|+||.||+|+. +|+.||||++... ..+++.+|++++.. ++||||+++++++.... ..+
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~ 116 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred cccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence 45688889999999999999987 5899999999643 34678899999887 79999999999998765 789
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||+++|+|.++++
T Consensus 117 lv~e~~~~g~L~~~l~ 132 (342)
T 1b6c_B 117 LVSDYHEHGSLFDYLN 132 (342)
T ss_dssp EEECCCTTCBHHHHHH
T ss_pred EEEeecCCCcHHHHHh
Confidence 9999999999999874
No 329
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=98.95 E-value=1.2e-09 Score=114.88 Aligned_cols=86 Identities=27% Similarity=0.449 Sum_probs=72.3
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhC--CCCcccceEEEEEeC----CeEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL--HHRNLVSLVGYCDEE----GEQM 696 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l--~H~niv~l~g~~~~~----~~~~ 696 (713)
.++|...+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++... +||||+++++++... ...+
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 111 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred ccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence 456888999999999999999874 899999998643 234566666666655 999999999999887 6889
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||+++|+|.++++
T Consensus 112 lv~e~~~~g~L~~~l~ 127 (337)
T 3mdy_A 112 LITDYHENGSLYDYLK 127 (337)
T ss_dssp EEECCCTTCBHHHHHH
T ss_pred EEEeccCCCcHHHHhh
Confidence 9999999999999875
No 330
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=98.94 E-value=3.9e-10 Score=118.28 Aligned_cols=88 Identities=27% Similarity=0.480 Sum_probs=72.4
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCccc-HHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEec
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
++|...+.||+|+||.||+|... +++.||||++....... ...+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 45778899999999999999965 68899999996543221 12466899999999999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
++ |+|.+++.
T Consensus 82 ~~-~~l~~~~~ 91 (324)
T 3mtl_A 82 LD-KDLKQYLD 91 (324)
T ss_dssp CS-EEHHHHHH
T ss_pred cc-cCHHHHHH
Confidence 98 58888764
No 331
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=98.94 E-value=1.8e-09 Score=113.29 Aligned_cols=86 Identities=22% Similarity=0.436 Sum_probs=75.2
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCC-CCcccceEEEEEe--CCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE--EGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~--~~~~~lV~ 699 (713)
++|...+.||+|+||.||+|.. .+++.||||++... ..+.+.+|++++.+++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 4678889999999999999985 56899999999753 3467999999999997 9999999999987 56789999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 113 e~~~~~~l~~~~~ 125 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ 125 (330)
T ss_dssp ECCCCCCHHHHGG
T ss_pred eccCchhHHHHHH
Confidence 9999999998764
No 332
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=98.94 E-value=9.2e-10 Score=115.63 Aligned_cols=86 Identities=21% Similarity=0.290 Sum_probs=74.9
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEEEEec
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
++|...+.||+|+||.||+|.. .+|+.||||.+..... .+.+.+|++++.++ +||||+++++++...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 5688889999999999999985 5689999999875432 23588999999999 999999999999999999999999
Q ss_pred CCCCCHHHHhh
Q 005120 702 MSNGTLRDQLS 712 (713)
Q Consensus 702 ~~~GsL~~~L~ 712 (713)
+ +|+|.++++
T Consensus 87 ~-~~~L~~~~~ 96 (330)
T 2izr_A 87 L-GPSLEDLFD 96 (330)
T ss_dssp C-CCBHHHHHH
T ss_pred C-CCCHHHHHH
Confidence 9 999999875
No 333
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=98.94 E-value=4.1e-10 Score=118.69 Aligned_cols=90 Identities=22% Similarity=0.379 Sum_probs=76.6
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcc--------cHHHHHHHHHHHhhCCCCcccceEEEEEeCC
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 693 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~--------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 693 (713)
.++|...+.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|++++++++||||+++++++...+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 35688889999999999999984 46889999999764321 1235788999999999999999999999999
Q ss_pred eEEEEEecCCCC-CHHHHhh
Q 005120 694 EQMLVYEFMSNG-TLRDQLS 712 (713)
Q Consensus 694 ~~~lV~Ey~~~G-sL~~~L~ 712 (713)
..++||||+..| +|.++++
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~ 122 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFID 122 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHH
T ss_pred EEEEEEEeCCCCccHHHHHH
Confidence 999999999888 9998875
No 334
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=98.94 E-value=1.4e-09 Score=114.89 Aligned_cols=89 Identities=24% Similarity=0.333 Sum_probs=76.7
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCC--CcccceEEEEEeCCeEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV 698 (713)
.+.|...+.||+|+||.||++...+++.||||++..... ...+.|.+|++++.+++| +||+++++++...+..|+|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 345778899999999999999988899999999875432 234679999999999977 9999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|| +.+|+|.++++
T Consensus 88 ~e-~~~~~L~~~l~ 100 (343)
T 3dbq_A 88 ME-CGNIDLNSWLK 100 (343)
T ss_dssp EC-CCSEEHHHHHH
T ss_pred Ee-CCCCCHHHHHH
Confidence 99 56789999874
No 335
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.93 E-value=3.6e-08 Score=106.18 Aligned_cols=280 Identities=14% Similarity=0.153 Sum_probs=138.3
Q ss_pred eeEEEcCCCCCccccCccccCCCCCCEEECCCCC---CCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEE
Q 005120 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNK---ISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (713)
Q Consensus 84 l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~---i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (713)
|+.+.+.. .++..-..+|.++++|+.+.+..|. ++.+-..+|..+.+|+.+.+..+ ++.+....|..+.+|+.+.
T Consensus 66 L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 66666653 3554555667777777777776553 54444556777777777666543 4445556677777777777
Q ss_pred ccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCC
Q 005120 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (713)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (713)
+..+ +..+....|..+.+|+.+.+..+ +...-...|. ...|+.+.+..+-. ......+..+.+++......+....
T Consensus 144 lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 144 IPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSSCB
T ss_pred ccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCccc-ccccchhhhccccceeccccccccc
Confidence 7543 33345556667777777777654 3323333443 24566666654322 2334455555566555544332211
Q ss_pred CCCccc--------------ccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc--cCccEEE
Q 005120 241 TTIPAS--------------YSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIK 303 (713)
Q Consensus 241 ~~~~~~--------------~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~ 303 (713)
.... +.....+..+.+.. .++.... .|.++..|+.+.+..+.. .+....+. .+|+.+.
T Consensus 220 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~--~I~~~aF~~c~~L~~i~ 294 (394)
T 4gt6_A 220 --IDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVV--SIGTGAFMNCPALQDIE 294 (394)
T ss_dssp --SSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCC--EECTTTTTTCTTCCEEE
T ss_pred --ccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccc--eecCccccccccccccc
Confidence 0000 00111122222211 1111111 344555566665544432 23333332 4555555
Q ss_pred ccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCC-CC-CCCceEEEecC
Q 005120 304 LSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-FN-IPPNVTVRLRG 381 (713)
Q Consensus 304 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~-~~-~~~l~~l~l~~ 381 (713)
+. +.++......|.++.+|+.+++..+ ++..-...|. .+.+|+.+.+..+ ++.|... +. ..+|+.+.+.+
T Consensus 295 l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~-----~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~ 366 (394)
T 4gt6_A 295 FS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFA-----GCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSG 366 (394)
T ss_dssp CC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-----TCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESS
T ss_pred CC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhh-----CCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECC
Confidence 54 3344444455666666666666543 3322222333 4455566666432 5544432 21 45555666555
Q ss_pred C
Q 005120 382 N 382 (713)
Q Consensus 382 N 382 (713)
|
T Consensus 367 ~ 367 (394)
T 4gt6_A 367 S 367 (394)
T ss_dssp C
T ss_pred c
Confidence 5
No 336
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=98.93 E-value=1.4e-09 Score=116.88 Aligned_cols=87 Identities=21% Similarity=0.355 Sum_probs=69.1
Q ss_pred HhhcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeC-------
Q 005120 621 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------- 692 (713)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------- 692 (713)
...++|...+.||+|+||.||+|.. .+|+.||||++..... ...+|+++|+.++|||||++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4456788999999999999999985 5689999999865432 234799999999999999999998543
Q ss_pred -------------------------------CeEEEEEecCCCCCHHHHhh
Q 005120 693 -------------------------------GEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 693 -------------------------------~~~~lV~Ey~~~GsL~~~L~ 712 (713)
...++|||||+ |+|.+.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~ 129 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLK 129 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHH
Confidence 23789999999 58877664
No 337
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=98.91 E-value=1.4e-09 Score=111.93 Aligned_cols=88 Identities=26% Similarity=0.436 Sum_probs=73.5
Q ss_pred hhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
..++|...+.||+|+||.||+|... ..||||++..... ...+.|.+|++++++++||||+++++++ ..+..++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3456888899999999999999863 3699999875432 2346799999999999999999999976 455689999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++|+|.++++
T Consensus 99 e~~~~~~L~~~l~ 111 (289)
T 3og7_A 99 QWCEGSSLYHHLH 111 (289)
T ss_dssp ECCCEEEHHHHHT
T ss_pred EecCCCcHHHHHh
Confidence 9999999999874
No 338
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=98.91 E-value=1.8e-09 Score=113.38 Aligned_cols=90 Identities=20% Similarity=0.287 Sum_probs=75.7
Q ss_pred hcCcccc-cccccCCcEEEEEEEec-CCCEEEEEEeccCC--cccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEE
Q 005120 623 TNNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 623 ~~~~~~~-~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 697 (713)
.+.|... +.||+|+||.||+|... +|+.||||++.... ....+++.+|+.++.++ +||||+++++++...+..++
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l 106 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence 3345444 78999999999999865 58999999987532 23357899999999999 56999999999999999999
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
||||+++|+|.+++.
T Consensus 107 v~e~~~~~~L~~~~~ 121 (327)
T 3lm5_A 107 ILEYAAGGEIFSLCL 121 (327)
T ss_dssp EEECCTTEEGGGGGS
T ss_pred EEEecCCCcHHHHHH
Confidence 999999999998873
No 339
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=98.91 E-value=1.6e-09 Score=118.48 Aligned_cols=89 Identities=27% Similarity=0.385 Sum_probs=75.1
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCcccceEEEEEeC-----Ce
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GE 694 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~ 694 (713)
.++|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++|||||++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 357888999999999999999854 57899999997532 22346789999999999999999999999765 56
Q ss_pred EEEEEecCCCCCHHHHhh
Q 005120 695 QMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~ 712 (713)
.|+|||||+ |+|.++++
T Consensus 105 ~~lv~e~~~-~~L~~~~~ 121 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFK 121 (432)
T ss_dssp EEEEEECCS-EEHHHHHH
T ss_pred EEEEEecCC-cCHHHHHh
Confidence 899999998 59998875
No 340
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=98.91 E-value=8.7e-10 Score=115.58 Aligned_cols=88 Identities=25% Similarity=0.466 Sum_probs=71.7
Q ss_pred cCcccccccccCCcEEEEEEEec-CCC----EEEEEEeccCC-cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~----~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (713)
++|...+.||+|+||.||+|... +++ .||+|.+.... ....+.+.+|+.++++++|||||+++++|. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46777899999999999999854 344 38888875432 222346789999999999999999999985 466899
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
|+||+++|+|.++++
T Consensus 92 v~e~~~~~~L~~~l~ 106 (325)
T 3kex_A 92 VTQYLPLGSLLDHVR 106 (325)
T ss_dssp EEECCTTCBSHHHHH
T ss_pred EEEeCCCCCHHHHHH
Confidence 999999999999875
No 341
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=98.91 E-value=2.1e-09 Score=115.72 Aligned_cols=88 Identities=24% Similarity=0.335 Sum_probs=76.0
Q ss_pred cCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCC--CCcccceEEEEEeCCeEEEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLH--HRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lV~ 699 (713)
..|...+.||+|+||.||++...+++.||||++..... ...+.|.+|++++.+++ |||||++++++...+..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 35888899999999999999987799999999865432 33467999999999996 599999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
| +.+|+|.++++
T Consensus 136 E-~~~~~L~~~l~ 147 (390)
T 2zmd_A 136 E-CGNIDLNSWLK 147 (390)
T ss_dssp E-CCSEEHHHHHH
T ss_pred e-cCCCCHHHHHH
Confidence 9 67889999874
No 342
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=98.90 E-value=1.3e-09 Score=115.40 Aligned_cols=89 Identities=25% Similarity=0.470 Sum_probs=70.5
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCccc-----HHHHHHHHHHHhhCCCCcccceEEEEEeCCeEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-----EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~-----~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (713)
.+.|...+.||+|+||.||+|... +|+.||||++....... .+.+.+|++++.+++||||+++++++...+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 456888899999999999999964 58999999997532211 246889999999999999999999999888999
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||+++ +|.++++
T Consensus 89 lv~e~~~~-~l~~~~~ 103 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIK 103 (346)
T ss_dssp EEEECCSE-EHHHHHT
T ss_pred EEEEcCCC-CHHHHHH
Confidence 99999996 8888764
No 343
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.90 E-value=9e-10 Score=127.58 Aligned_cols=89 Identities=19% Similarity=0.405 Sum_probs=73.2
Q ss_pred cCcccccccccCCcEEEEEEEec--CCCEEEEEEeccCC-cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCe-----E
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE-----Q 695 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~--~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-----~ 695 (713)
++|...+.||+|+||.||+|... +|+.||||++.... ....+.|.+|++++.+++|||||++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57888899999999999999864 58899999986532 2334578999999999999999999999977554 7
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
|+|||||++|+|.+++.
T Consensus 160 ~lv~E~~~g~~L~~~~~ 176 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG 176 (681)
T ss_dssp EEEEECCCCEECC----
T ss_pred EEEEEeCCCCcHHHHHh
Confidence 99999999999988764
No 344
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=98.90 E-value=1.8e-09 Score=111.92 Aligned_cols=87 Identities=29% Similarity=0.438 Sum_probs=71.4
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC----cccHHHHHHHHHHHhhCCCCcccceEEEEEe--CCeEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQM 696 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~ 696 (713)
++|...+.||+|+||.||++... +++.||||++.... ....+.+.+|++++++++||||+++++++.. .+..+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 57888999999999999999864 58899999996532 2234679999999999999999999999853 45789
Q ss_pred EEEecCCCCCHHHHh
Q 005120 697 LVYEFMSNGTLRDQL 711 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L 711 (713)
+||||+++| |.+++
T Consensus 85 lv~e~~~~~-l~~~~ 98 (305)
T 2wtk_C 85 MVMEYCVCG-MQEML 98 (305)
T ss_dssp EEEECCSEE-HHHHH
T ss_pred EEehhccCC-HHHHH
Confidence 999999987 66654
No 345
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=98.90 E-value=2.4e-09 Score=112.95 Aligned_cols=90 Identities=24% Similarity=0.417 Sum_probs=73.8
Q ss_pred hhcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc-ccHHHHHHHHHH-HhhCCCCcccceEEEEEeCCeEEEE
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
..++|...+.||+|+||.||+|.. .+|+.||||++..... ...+++..|..+ ++.++||||+++++++...+..|+|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 345677888999999999999985 5689999999976432 233456666666 7788999999999999999999999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
|||+++ +|.++++
T Consensus 129 ~e~~~~-~L~~~l~ 141 (340)
T 3an0_A 129 MELMDT-SLDKFYK 141 (340)
T ss_dssp ECCCSE-EHHHHHH
T ss_pred HHHhhC-cHHHHHH
Confidence 999985 8988764
No 346
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=98.90 E-value=1.4e-09 Score=124.94 Aligned_cols=91 Identities=25% Similarity=0.449 Sum_probs=75.7
Q ss_pred HhhcCcccccccccCCcEEEEEEEecC----CCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeE
Q 005120 621 LATNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (713)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 695 (713)
...++|...+.||+|+||.||+|.... +..||||++..... ...+.|.+|+.++++++|||||+++|++. ++..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 344567788899999999999998642 45799999875432 23467999999999999999999999984 5668
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
|+||||+++|+|.++++
T Consensus 466 ~lv~E~~~~g~L~~~l~ 482 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQ 482 (656)
T ss_dssp EEEEECCTTCBHHHHHH
T ss_pred EEEEEcCCCCcHHHHHH
Confidence 99999999999999875
No 347
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=98.89 E-value=5.9e-10 Score=119.50 Aligned_cols=89 Identities=12% Similarity=0.150 Sum_probs=71.2
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccC---CcccHHHHHHHH---HHHhhCCCCcccceE-------EE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG---SLQGEKEFLTEI---QFLSRLHHRNLVSLV-------GY 688 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~f~~E~---~~l~~l~H~niv~l~-------g~ 688 (713)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.|.+|+ +.+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45677889999999999999995 56899999999743 223346799999 566677899999998 66
Q ss_pred EEeCC-----------------eEEEEEecCCCCCHHHHhh
Q 005120 689 CDEEG-----------------EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 689 ~~~~~-----------------~~~lV~Ey~~~GsL~~~L~ 712 (713)
+...+ ..|+||||+ +|+|.++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~ 191 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGE 191 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHH
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHH
Confidence 65443 279999999 689999885
No 348
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=98.89 E-value=1.3e-09 Score=120.02 Aligned_cols=88 Identities=26% Similarity=0.411 Sum_probs=64.9
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCcccceEEEEEeC-----CeE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 695 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 695 (713)
++|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++.+++|||||++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 56888999999999999999854 68999999996532 22346799999999999999999999999543 468
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
|+||||++ |+|.++++
T Consensus 133 ~lv~e~~~-~~L~~~~~ 148 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFR 148 (458)
T ss_dssp EEEECCCS-EEHHHHHH
T ss_pred EEEEeccc-cchhhhcc
Confidence 99999986 68988775
No 349
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=98.89 E-value=1.5e-09 Score=112.87 Aligned_cols=87 Identities=28% Similarity=0.432 Sum_probs=72.9
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEEe
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (713)
.++|...+.||+|+||.||+|... ..+|||.++.... ...+.|.+|++++.+++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 456788899999999999999863 4689998875332 23467999999999999999999999875 456889999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|+++|+|.++++
T Consensus 112 ~~~~~~L~~~l~ 123 (307)
T 3lb7_A 112 WCEGSSLYKHLH 123 (307)
T ss_dssp CCSSCBHHHHHH
T ss_pred cCCCCcHHHHHH
Confidence 999999999885
No 350
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=98.89 E-value=1.7e-09 Score=113.68 Aligned_cols=89 Identities=22% Similarity=0.389 Sum_probs=74.9
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCC-CCcccceEEEEEe--------C
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE--------E 692 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~--------~ 692 (713)
..+|...+.||+|+||.||+|... +|+.||||++........+.+.+|+.++.+++ ||||+++++++.. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 446888899999999999999964 68999999997665555678999999999996 9999999999953 3
Q ss_pred CeEEEEEecCCCCCHHHHhh
Q 005120 693 GEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~ 712 (713)
...++|+||++ |+|.++++
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~ 125 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLK 125 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHH
T ss_pred ceEEEEEEecC-CCHHHHHH
Confidence 34799999997 79988874
No 351
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=98.89 E-value=1.3e-09 Score=111.99 Aligned_cols=88 Identities=28% Similarity=0.464 Sum_probs=66.4
Q ss_pred cCcccccccccCCcEEEEEEEec--CCC--EEEEEEeccCC---cccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP--DGT--VVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~--~g~--~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (713)
++|...+.||+|+||.||+|... +++ .||||+++... ....++|.+|++++.+++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 46778899999999999999863 233 68999986542 223467999999999999999999999997654 88
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+|+||+++|+|.++++
T Consensus 97 ~v~e~~~~~~L~~~l~ 112 (291)
T 1u46_A 97 MVTELAPLGSLLDRLR 112 (291)
T ss_dssp EEEECCTTCBHHHHHH
T ss_pred eeEecccCCCHHHHHH
Confidence 9999999999999874
No 352
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=98.89 E-value=1.4e-09 Score=114.61 Aligned_cols=87 Identities=25% Similarity=0.374 Sum_probs=70.5
Q ss_pred cCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc--------ccHHHHHHHHHHHhhCC---------CCcccceE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLH---------HRNLVSLV 686 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~---------H~niv~l~ 686 (713)
++|...+.||+|+||.||+|+. +|+.||||++..... ...+.+.+|+.++++++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4577789999999999999987 789999999975421 22367899999998885 88888888
Q ss_pred EEEE------------------------------eCCeEEEEEecCCCCCHHHHh
Q 005120 687 GYCD------------------------------EEGEQMLVYEFMSNGTLRDQL 711 (713)
Q Consensus 687 g~~~------------------------------~~~~~~lV~Ey~~~GsL~~~L 711 (713)
+++. ..+..|+|||||++|++.+.+
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~ 153 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQM 153 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGG
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHH
Confidence 8753 167899999999999766654
No 353
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=98.88 E-value=2.6e-09 Score=115.40 Aligned_cols=83 Identities=18% Similarity=0.257 Sum_probs=68.3
Q ss_pred Ccccc-cccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHh-hCCCCcccceEEEEEe----CCeEEE
Q 005120 625 NFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLS-RLHHRNLVSLVGYCDE----EGEQML 697 (713)
Q Consensus 625 ~~~~~-~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~-~l~H~niv~l~g~~~~----~~~~~l 697 (713)
+|... ++||+|+||.||++... +|+.||||+++.. ..+.+|++++. ..+|||||++++++.. .+..|+
T Consensus 62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 34443 68999999999999864 5889999999642 45778888874 4599999999999865 456899
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
|||||++|+|.++++
T Consensus 137 v~E~~~gg~L~~~l~ 151 (400)
T 1nxk_A 137 VMECLDGGELFSRIQ 151 (400)
T ss_dssp EEECCCSEEHHHHHH
T ss_pred EEEeCCCCcHHHHHH
Confidence 999999999999985
No 354
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=98.87 E-value=3.1e-09 Score=109.10 Aligned_cols=89 Identities=22% Similarity=0.324 Sum_probs=70.3
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcc-cHH-HHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ-GEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~-~~~-~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
.++|...+.||+|+||.||+|.. .+|+.||||++...... ... .+.++...++.++||||+++++++...+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 45688889999999999999986 46899999999754322 222 3445555688889999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||++ |+|.++++
T Consensus 86 e~~~-~~l~~~l~ 97 (290)
T 3fme_A 86 ELMD-TSLDKFYK 97 (290)
T ss_dssp ECCS-EEHHHHHH
T ss_pred ehhc-cchHHHHH
Confidence 9998 58877763
No 355
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=98.87 E-value=3.1e-09 Score=114.31 Aligned_cols=89 Identities=28% Similarity=0.515 Sum_probs=66.6
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCC--cccHHHHHHHHHHHhhCC-CCcccceEEEEEeCC--eEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEG--EQM 696 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~--~~~ 696 (713)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++.+++ |||||++++++...+ ..|
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 46788899999999999999985 468999999986532 223456889999999997 999999999997654 689
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+|||||+ |+|.++++
T Consensus 88 lv~e~~~-~~L~~~~~ 102 (388)
T 3oz6_A 88 LVFDYME-TDLHAVIR 102 (388)
T ss_dssp EEEECCS-EEHHHHHH
T ss_pred EEecccC-cCHHHHHH
Confidence 9999999 68988764
No 356
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.87 E-value=3.9e-09 Score=109.10 Aligned_cols=83 Identities=18% Similarity=0.264 Sum_probs=69.7
Q ss_pred Ccccc-cccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHH-hhCCCCcccceEEEEEe----CCeEEE
Q 005120 625 NFNSS-TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFL-SRLHHRNLVSLVGYCDE----EGEQML 697 (713)
Q Consensus 625 ~~~~~-~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~l 697 (713)
+|... +.||+|+||.||++.. .+++.||||+++. ...+.+|++++ +..+||||+++++++.. ....++
T Consensus 18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 45554 7799999999999986 4688999999964 24677889888 56699999999999976 567899
Q ss_pred EEecCCCCCHHHHhh
Q 005120 698 VYEFMSNGTLRDQLS 712 (713)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (713)
||||+++|+|.++++
T Consensus 93 v~e~~~~~~L~~~l~ 107 (299)
T 3m2w_A 93 VMECLDGGELFSRIQ 107 (299)
T ss_dssp EECCCCSCBHHHHHH
T ss_pred EEeecCCCcHHHHHH
Confidence 999999999999874
No 357
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=98.86 E-value=1.4e-09 Score=116.14 Aligned_cols=89 Identities=22% Similarity=0.378 Sum_probs=68.1
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCC------
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------ 693 (713)
.+.|...+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 45688889999999999999986 4589999999965322 22457899999999999999999999997653
Q ss_pred eEEEEEecCCCCCHHHHhh
Q 005120 694 EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~ 712 (713)
..|+||||| +++|.++++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~ 121 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMK 121 (367)
T ss_dssp CCEEEEECC-SEEHHHHHH
T ss_pred eEEEEEecC-CCCHHHHHh
Confidence 459999999 789998874
No 358
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.86 E-value=6.2e-08 Score=104.33 Aligned_cols=287 Identities=11% Similarity=0.153 Sum_probs=169.0
Q ss_pred CCCCcceeEEEcCCCC---CccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCC
Q 005120 78 DDGYLHLRELQLLNLN---LSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLP 154 (713)
Q Consensus 78 ~~~~~~l~~L~l~~~~---l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 154 (713)
..++.+|+.+.+..+. ++..-..+|..+.+|+.+.+..+ ++.+...+|..+.+|+.+.+..+ +..+....|..+.
T Consensus 83 F~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~ 160 (394)
T 4gt6_A 83 FYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCY 160 (394)
T ss_dssp TTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred hhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceeccc
Confidence 3456788999887653 55555677888899998888655 55466678899999999999754 4446667888999
Q ss_pred CCCEEEccccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcCCCCcCC------------
Q 005120 155 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPEL------------ 222 (713)
Q Consensus 155 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l------------ 222 (713)
+|+.+.+..+ +..+-...|.+ .+|+.+.+..+-. ......|..+.+++......+.........+
T Consensus 161 ~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (394)
T 4gt6_A 161 SLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIR 237 (394)
T ss_dssp TCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEE
T ss_pred ccccccccce-eeEeccccccc-cceeEEEECCccc-ccccchhhhccccceecccccccccccceeecccccccccccc
Confidence 9999998765 44444555644 6788888876543 3445667777777777665544331110000
Q ss_pred -CCCCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCCCCCCCCCccEEEccCCCCcccCCCCccc--cCc
Q 005120 223 -SELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNI 299 (713)
Q Consensus 223 -~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L 299 (713)
.....+..+.+..+ ++. .-...|.++.+|+.+.+..+..+-....+.++++|+.+.+. +.++ .|+...|. .+|
T Consensus 238 ~~~~~~~~~~~ip~~-v~~-i~~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L 313 (394)
T 4gt6_A 238 YPSQREDPAFKIPNG-VAR-IETHAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISL 313 (394)
T ss_dssp CCTTCCCSEEECCTT-EEE-ECTTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTC
T ss_pred cccccccceEEcCCc-ceE-cccceeeecccccEEecccccceecCcccccccccccccCC-Cccc-ccCceeecCCCCc
Confidence 01112222322211 111 11235667777777777655433122256677777777775 3444 56655555 577
Q ss_pred cEEEccCCcCcccCChhccCCcccceeecccccCcccCC-chhhhhccCCCCCccEEEccCCcCCCcCCCCCCCCceEEE
Q 005120 300 TTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP-SSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVR 378 (713)
Q Consensus 300 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~~~~l~~l~ 378 (713)
+.++|..+ ++..-..+|.++.+|+.+.+..+ ++ .+. ..|. ++.+|+.+++.+|.... ..-.....++.+.
T Consensus 314 ~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~-----~C~~L~~i~~~~~~~~~-~~~~~~~~L~~i~ 384 (394)
T 4gt6_A 314 KSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFS-----NCTALNNIEYSGSRSQW-NAISTDSGLQNLP 384 (394)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGT-----TCTTCCEEEESSCHHHH-HTCBCCCCC----
T ss_pred CEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhh-----CCCCCCEEEECCceeeh-hhhhccCCCCEEE
Confidence 77777654 55455667777778888777544 54 343 3344 66777777777765321 1111234455555
Q ss_pred ecCC
Q 005120 379 LRGN 382 (713)
Q Consensus 379 l~~N 382 (713)
+..|
T Consensus 385 i~~~ 388 (394)
T 4gt6_A 385 VAPG 388 (394)
T ss_dssp ----
T ss_pred eCCC
Confidence 5444
No 359
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=98.86 E-value=3.5e-09 Score=113.22 Aligned_cols=89 Identities=19% Similarity=0.290 Sum_probs=73.7
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCcccceEEEEEeCC------
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------ 693 (713)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 35788889999999999999985 458899999997532 223457899999999999999999999997654
Q ss_pred eEEEEEecCCCCCHHHHhh
Q 005120 694 EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~ 712 (713)
..|+||||+++ +|.++++
T Consensus 104 ~~~lv~e~~~~-~l~~~~~ 121 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ 121 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH
T ss_pred ceEEEEEcCCC-CHHHHHh
Confidence 68999999985 7877764
No 360
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=98.86 E-value=3.4e-09 Score=111.17 Aligned_cols=89 Identities=29% Similarity=0.536 Sum_probs=73.7
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCC----EEEEEEeccC-CcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~----~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (713)
.++|...+.||+|+||.||+|... +++ .||+|.+... .....+++.+|+.++.+++||||++++++|.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 356888899999999999999853 344 4688887543 2344678999999999999999999999998654 78
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+|+||+++|+|.++++
T Consensus 93 ~v~~~~~~g~L~~~l~ 108 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVR 108 (327)
T ss_dssp EEECCCSSCBHHHHHH
T ss_pred EEEEecCCCcHHHHHH
Confidence 9999999999999874
No 361
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=98.86 E-value=3.8e-09 Score=111.93 Aligned_cols=88 Identities=32% Similarity=0.523 Sum_probs=72.8
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeC--------
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-------- 692 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-------- 692 (713)
++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+|++++.+++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 4688889999999999999996 4689999999865432 2245788999999999999999999999763
Q ss_pred CeEEEEEecCCCCCHHHHhh
Q 005120 693 GEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~ 712 (713)
+..++||||+++ +|.+++.
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~ 115 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLS 115 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHH
T ss_pred ceEEEEEeccCC-CHHHHHh
Confidence 468999999995 7766653
No 362
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=98.85 E-value=5.2e-10 Score=116.73 Aligned_cols=94 Identities=21% Similarity=0.334 Sum_probs=78.9
Q ss_pred HHHHHhhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCe
Q 005120 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (713)
Q Consensus 617 ~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 694 (713)
+++....++|...+.||+|+||.||+|...+ .||||++..... ...+.|.+|+.++.+++||||+++++++...+.
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 103 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH 103 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence 4444556788899999999999999998743 499999865322 223468899999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHhh
Q 005120 695 QMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~ 712 (713)
.++||||+++|+|.++++
T Consensus 104 ~~iv~e~~~~~~L~~~l~ 121 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVR 121 (319)
T ss_dssp EEEECBCCCSEEHHHHTT
T ss_pred eEEEeecccCCcHHHHHH
Confidence 999999999999999885
No 363
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=98.85 E-value=5.7e-09 Score=109.30 Aligned_cols=89 Identities=24% Similarity=0.414 Sum_probs=72.0
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc-ccHHHHHHHHH-HHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
.++|...+.||+|+||.||+|... +|+.||||++..... ...+++.+|+. +++.++||||++++|++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 456888899999999999999974 588999999976432 23345666666 677789999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||+++ +|.+++.
T Consensus 101 e~~~~-~l~~~~~ 112 (327)
T 3aln_A 101 ELMST-SFDKFYK 112 (327)
T ss_dssp CCCSE-EHHHHHH
T ss_pred eecCC-ChHHHHH
Confidence 99995 7777653
No 364
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=98.85 E-value=3.7e-09 Score=111.99 Aligned_cols=89 Identities=24% Similarity=0.424 Sum_probs=74.6
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeC-----CeE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 695 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 695 (713)
.++|...+.||+|+||.||+|... +|+.||||++..... .....+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 457888899999999999999864 588999999965432 2345788999999999999999999998654 678
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
++||||++ |+|.+++.
T Consensus 90 ~lv~e~~~-~~L~~~~~ 105 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIS 105 (353)
T ss_dssp EEEECCCS-EEHHHHHH
T ss_pred EEEEeccC-ccHHHHHh
Confidence 99999998 68988764
No 365
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=98.84 E-value=7.1e-09 Score=108.98 Aligned_cols=86 Identities=34% Similarity=0.512 Sum_probs=68.4
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHH--HhhCCCCcccceEEEEEe-----CCeE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQF--LSRLHHRNLVSLVGYCDE-----EGEQ 695 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~--l~~l~H~niv~l~g~~~~-----~~~~ 695 (713)
.++|...+.||+|+||.||+|.. +++.||||++.... .+++..|.++ +..++|+||+++++++.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 45688889999999999999987 68999999996432 3445555555 445899999999987643 2256
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
++||||+++|+|.++++
T Consensus 88 ~lv~e~~~~g~L~~~l~ 104 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLS 104 (336)
T ss_dssp EEEECCCTTCBHHHHHH
T ss_pred EEEEecCCCCcHHHHHh
Confidence 89999999999999874
No 366
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=98.84 E-value=1.7e-09 Score=112.54 Aligned_cols=98 Identities=22% Similarity=0.336 Sum_probs=80.6
Q ss_pred ccHHHHHHhhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCC--CCcccceEEEE
Q 005120 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLH--HRNLVSLVGYC 689 (713)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~--H~niv~l~g~~ 689 (713)
+.++.+....+.|...+.||+|+||.||++...+++.||||++..... ...+.|.+|++++.+++ |+||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 334444455567888999999999999999988899999999965432 23467999999999997 59999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHhh
Q 005120 690 DEEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 690 ~~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
...+..++||| +.+|+|.++++
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~ 119 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLK 119 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHH
T ss_pred ecCCEEEEEEe-cCCCcHHHHHH
Confidence 99999999999 67789999874
No 367
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.84 E-value=2.8e-09 Score=122.82 Aligned_cols=91 Identities=20% Similarity=0.238 Sum_probs=77.3
Q ss_pred hhcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCC---cccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEE
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 696 (713)
..++|...++||+|+||.||+|... +++.||||+++... ....+.+.+|..++..+ +||+|+++++++...+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3467888999999999999999964 58899999997531 12345688999999988 8999999999999889999
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+|||||++|+|.++|+
T Consensus 419 lV~E~~~gg~L~~~l~ 434 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQ 434 (674)
T ss_dssp EEEECCCSCBHHHHHH
T ss_pred EEEeCcCCCcHHHHHH
Confidence 9999999999999875
No 368
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=98.84 E-value=2.2e-09 Score=118.26 Aligned_cols=88 Identities=22% Similarity=0.324 Sum_probs=72.1
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccC--CcccHHHHHHHHHHHhhCCCCcccceEEEEEeC------C
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~ 693 (713)
.++|...+.||+|+||.||+|.. ..|+.||||++... .....+.+.+|+.+++.++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 45788889999999999999984 45889999999754 222345789999999999999999999999654 3
Q ss_pred eEEEEEecCCCCCHHHHh
Q 005120 694 EQMLVYEFMSNGTLRDQL 711 (713)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L 711 (713)
..|+|||||+++ |.+.+
T Consensus 141 ~~~lv~E~~~~~-l~~~~ 157 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVI 157 (464)
T ss_dssp EEEEEEECCSEE-HHHHH
T ss_pred eEEEEEeCCCCC-HHHHH
Confidence 579999999875 66554
No 369
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=98.83 E-value=5.6e-09 Score=108.38 Aligned_cols=89 Identities=31% Similarity=0.492 Sum_probs=70.4
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCC-----cccHHHHHHHHHHHhhC---CCCcccceEEEEEeCC
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRL---HHRNLVSLVGYCDEEG 693 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~ 693 (713)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+|++++.++ +||||++++++|....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56788899999999999999984 568999999986422 11234677888877766 4999999999997755
Q ss_pred -----eEEEEEecCCCCCHHHHhh
Q 005120 694 -----EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 694 -----~~~lV~Ey~~~GsL~~~L~ 712 (713)
..++||||++ |+|.++++
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~ 110 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLD 110 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHH
T ss_pred CCCceeEEEEehhhh-cCHHHHHh
Confidence 4799999998 59999875
No 370
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=98.83 E-value=5.4e-09 Score=113.14 Aligned_cols=81 Identities=25% Similarity=0.427 Sum_probs=63.2
Q ss_pred ccccccCCcEEEEEEEec---CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEe--CCeEEEEEecCC
Q 005120 629 STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVYEFMS 703 (713)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~---~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~Ey~~ 703 (713)
.++||+|+||.||+|... +++.||||++..... .+.+.+|++++++++|||||++++++.. ....|+||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 458999999999999965 478899999975432 3578899999999999999999999965 568899999998
Q ss_pred CCCHHHHhh
Q 005120 704 NGTLRDQLS 712 (713)
Q Consensus 704 ~GsL~~~L~ 712 (713)
+ +|.+++.
T Consensus 104 ~-~l~~~~~ 111 (405)
T 3rgf_A 104 H-DLWHIIK 111 (405)
T ss_dssp E-EHHHHHH
T ss_pred C-CHHHHHH
Confidence 5 7877663
No 371
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=98.83 E-value=6.9e-09 Score=106.94 Aligned_cols=87 Identities=20% Similarity=0.323 Sum_probs=75.8
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEEEEe
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E 700 (713)
.++|...+.||+|+||.||+|.. .+|+.||||++..... .+++.+|+.++.++ +|+|++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 35688889999999999999984 5689999999865432 24588999999999 89999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|+ +|+|.++++
T Consensus 87 ~~-~~~L~~~l~ 97 (298)
T 1csn_A 87 LL-GPSLEDLLD 97 (298)
T ss_dssp CC-CCBHHHHHH
T ss_pred ec-CCCHHHHHH
Confidence 99 999999875
No 372
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=98.83 E-value=4.5e-09 Score=114.84 Aligned_cols=83 Identities=24% Similarity=0.187 Sum_probs=70.9
Q ss_pred cccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEEEEecCCC
Q 005120 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (713)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (713)
|...++||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++...+..|+|||||+
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 4456889999999998766667999999998653 235678999999876 89999999999999999999999996
Q ss_pred CCHHHHhh
Q 005120 705 GTLRDQLS 712 (713)
Q Consensus 705 GsL~~~L~ 712 (713)
|+|.++++
T Consensus 93 gsL~~~l~ 100 (434)
T 2rio_A 93 LNLQDLVE 100 (434)
T ss_dssp EEHHHHHH
T ss_pred CCHHHHHh
Confidence 69999885
No 373
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=98.82 E-value=4.9e-09 Score=111.71 Aligned_cols=89 Identities=22% Similarity=0.326 Sum_probs=74.2
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc-ccHHHHHHHHHHHhhCCCCcccceEEEEEeC-----CeE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 695 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 695 (713)
...|...+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 456888999999999999999854 578999999975432 2336799999999999999999999999654 368
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
|+|+||++ |+|.++++
T Consensus 106 ~iv~e~~~-~~L~~~l~ 121 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLK 121 (364)
T ss_dssp EEEEECCS-EEHHHHHH
T ss_pred EEEEcccC-cCHHHHHH
Confidence 99999998 58988764
No 374
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=98.82 E-value=4.2e-09 Score=110.20 Aligned_cols=90 Identities=31% Similarity=0.497 Sum_probs=71.5
Q ss_pred hhcCcccccccccCCcEEEEEEEe--cCCCEEEEEEeccCCc--ccHHHHHHHHHHHhhC---CCCcccceEEEEE----
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGIL--PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRL---HHRNLVSLVGYCD---- 690 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~--~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l---~H~niv~l~g~~~---- 690 (713)
..++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.+++.+ +||||++++++|.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456788899999999999999986 4578999999864321 1223567787777665 8999999999997
Q ss_pred -eCCeEEEEEecCCCCCHHHHhh
Q 005120 691 -EEGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 691 -~~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
.....++||||++ |+|.++++
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~ 110 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLD 110 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHH
T ss_pred CCCceEEEEEecCC-CCHHHHHH
Confidence 4457899999999 69998874
No 375
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=98.81 E-value=2e-09 Score=114.22 Aligned_cols=83 Identities=14% Similarity=0.242 Sum_probs=70.7
Q ss_pred cCcccccccccCCcEEEEEEEecC---------CCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccc----------
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPD---------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS---------- 684 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~---------- 684 (713)
++|...+.||+|+||.||+|.... ++.||||++... +.+.+|++++.+++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 568888999999999999998653 789999998754 35889999999999999998
Q ss_pred -----eEEEEEe-CCeEEEEEecCCCCCHHHHhh
Q 005120 685 -----LVGYCDE-EGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 685 -----l~g~~~~-~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
+++++.. .+..|+||||+ +|+|.++++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~ 149 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALD 149 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHH
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHH
Confidence 6788876 67889999999 999999875
No 376
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=98.81 E-value=1.5e-09 Score=113.02 Aligned_cols=91 Identities=22% Similarity=0.388 Sum_probs=69.1
Q ss_pred hhcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcc------cHHHHHHHHHHHhhC----CCCcccceEEEEE
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRL----HHRNLVSLVGYCD 690 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~------~~~~f~~E~~~l~~l----~H~niv~l~g~~~ 690 (713)
..++|...+.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.++.++ +|+||+++++++.
T Consensus 29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 356788899999999999999985 46889999999654322 122466799999888 8999999999998
Q ss_pred eCCeEEEEEec-CCCCCHHHHhh
Q 005120 691 EEGEQMLVYEF-MSNGTLRDQLS 712 (713)
Q Consensus 691 ~~~~~~lV~Ey-~~~GsL~~~L~ 712 (713)
..+..++|+|| +++|+|.++++
T Consensus 109 ~~~~~~~v~e~~~~~~~L~~~l~ 131 (312)
T 2iwi_A 109 TQEGFMLVLERPLPAQDLFDYIT 131 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHHH
T ss_pred cCCeEEEEEEecCCCCCHHHHHH
Confidence 88889999999 89999999874
No 377
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=98.80 E-value=5e-09 Score=114.32 Aligned_cols=87 Identities=22% Similarity=0.257 Sum_probs=72.7
Q ss_pred hhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEEEEe
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E 700 (713)
...+|...++||+|+||.||.....+|+.||||++...... .+.+|++++.++ +|||||++++++...+..|+|||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 34468888999999999966555567899999999654332 356899999999 89999999999999999999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
||+ |+|.++++
T Consensus 99 ~~~-g~L~~~l~ 109 (432)
T 3p23_A 99 LCA-ATLQEYVE 109 (432)
T ss_dssp CCS-EEHHHHHH
T ss_pred CCC-CCHHHHHH
Confidence 997 69999875
No 378
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=98.80 E-value=3.1e-09 Score=112.40 Aligned_cols=88 Identities=17% Similarity=0.211 Sum_probs=67.6
Q ss_pred cCcccccccccCCcEEEEEEEec----CCCEEEEEEeccCCcc-----------cHHHHHHHHHHHhhCCCCcccceEEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQ-----------GEKEFLTEIQFLSRLHHRNLVSLVGY 688 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vavK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~niv~l~g~ 688 (713)
++|...+.||+|+||.||+|... .+..||||+....... ..+.+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888899999999999999975 4678999998754321 12347788999999999999999999
Q ss_pred EEe----CCeEEEEEecCCCCCHHHHhh
Q 005120 689 CDE----EGEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 689 ~~~----~~~~~lV~Ey~~~GsL~~~L~ 712 (713)
+.. ....|+||||+ +|+|.++++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~ 143 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISG 143 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCB
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHH
Confidence 987 67889999999 999999875
No 379
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=98.80 E-value=4.9e-09 Score=112.06 Aligned_cols=89 Identities=26% Similarity=0.421 Sum_probs=74.0
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcc--cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeE----
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ---- 695 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~---- 695 (713)
.+.|...+.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 35688889999999999999985 45889999999764322 246789999999999999999999999776554
Q ss_pred --EEEEecCCCCCHHHHhh
Q 005120 696 --MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 --~lV~Ey~~~GsL~~~L~ 712 (713)
++||||++ |+|.+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~ 138 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG 138 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT
T ss_pred eEEEEEcccc-ccHHHHhh
Confidence 99999999 68887653
No 380
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=98.79 E-value=4.9e-09 Score=111.73 Aligned_cols=90 Identities=16% Similarity=0.210 Sum_probs=70.4
Q ss_pred hhcCcccccccccCCcEEEEEEEecC------CCEEEEEEeccCCccc-----------HHHHHHHHHHHhhCCCCcccc
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQG-----------EKEFLTEIQFLSRLHHRNLVS 684 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~------g~~vavK~l~~~~~~~-----------~~~f~~E~~~l~~l~H~niv~ 684 (713)
..++|...+.||+|+||.||+|.... ++.||||++....... ...+..|+..+..++|+||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34578889999999999999998754 4789999987653211 123456677788889999999
Q ss_pred eEEEEEeC----CeEEEEEecCCCCCHHHHhh
Q 005120 685 LVGYCDEE----GEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 685 l~g~~~~~----~~~~lV~Ey~~~GsL~~~L~ 712 (713)
+++++... ...|+||||+ +|+|.++++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~ 143 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYE 143 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHH
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHH
Confidence 99999764 4479999999 999999874
No 381
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=98.79 E-value=8.7e-10 Score=125.08 Aligned_cols=89 Identities=29% Similarity=0.496 Sum_probs=74.0
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccC-CcccHHHHHHHHHHHhhCCCCcccceEEEEEe------CCeE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------EGEQ 695 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~------~~~~ 695 (713)
++|...+.||+|+||.||+|.. .+|+.||||++... .....+.|.+|++++.+++|||||++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 5688899999999999999986 45889999998754 22334679999999999999999999998754 5667
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
++||||+++|+|.++++
T Consensus 94 ~LVmEy~~ggsL~~~L~ 110 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLN 110 (676)
T ss_dssp CCEEECCSSCBHHHHHH
T ss_pred EEEEEeCCCCCHHHHHH
Confidence 99999999999999875
No 382
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=98.78 E-value=3e-09 Score=113.50 Aligned_cols=89 Identities=22% Similarity=0.414 Sum_probs=67.2
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCC--cccHHHHHHHHHHHhhCCCCcccceEEEEEeC------C
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~ 693 (713)
.+.|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 35788889999999999999984 468899999996532 22346788999999999999999999999654 5
Q ss_pred eEEEEEecCCCCCHHHHhh
Q 005120 694 EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~ 712 (713)
..|+|+||+ +|+|.++++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~ 125 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVK 125 (367)
T ss_dssp CCEEEEECC-CEECC----
T ss_pred eEEEEeccc-CCCHHHHHh
Confidence 679999999 578887764
No 383
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=98.77 E-value=1.2e-08 Score=108.24 Aligned_cols=90 Identities=30% Similarity=0.406 Sum_probs=62.1
Q ss_pred HHHHhhcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCe--
Q 005120 618 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE-- 694 (713)
Q Consensus 618 ~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-- 694 (713)
+.....++|...+.||+|+||.||+|... +|+.||||++...... .+.+.+|++.+..++|||||++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 34556678999999999999999999964 5899999998654322 2356788888999999999999999966433
Q ss_pred -----EEEEEecCCCCCHHH
Q 005120 695 -----QMLVYEFMSNGTLRD 709 (713)
Q Consensus 695 -----~~lV~Ey~~~GsL~~ 709 (713)
.++||||+++ +|.+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~ 114 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHR 114 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHH
T ss_pred ccceeEEEEeecccc-cHHH
Confidence 7899999997 4444
No 384
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=98.77 E-value=5.9e-09 Score=110.54 Aligned_cols=88 Identities=26% Similarity=0.414 Sum_probs=72.7
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc--ccHHHHHHHHHHHhhCCCCcccceEEEEEeCCe------
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE------ 694 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------ 694 (713)
++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 46778899999999999999864 589999999965432 224578999999999999999999999976543
Q ss_pred EEEEEecCCCCCHHHHhh
Q 005120 695 QMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~ 712 (713)
.|+||||++ |+|.+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~ 120 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG 120 (353)
T ss_dssp CEEEEECCS-EEGGGTTT
T ss_pred EEEEecccc-CCHHHHhc
Confidence 499999998 68887653
No 385
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.77 E-value=2.5e-09 Score=113.23 Aligned_cols=134 Identities=19% Similarity=0.220 Sum_probs=59.3
Q ss_pred cCCCCCccEEecccCCCcCCCCcCCCCCCCCcEEEcccccCCCCCCccccc--CCCCCCEEEccC--CCCccC------C
Q 005120 198 LSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYS--NMSKLLKLSLRN--CSLQGP------M 267 (713)
Q Consensus 198 l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~--~l~~L~~L~L~~--N~l~~~------~ 267 (713)
+..+|+|+.|.+++|.-. .++. + .+++|+.|++..+.+.. .....+. .+++|+.|+|+. |...+. .
T Consensus 168 l~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~-~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~ 243 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPD-SVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR 243 (362)
T ss_dssp HHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCH-HHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG
T ss_pred HhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCCh-HHHHHHHHccCCCCcEEEEeccccccccchhHHHHH
Confidence 344455555555544201 1121 2 25566666666655542 1111222 456666666542 111110 0
Q ss_pred CCC--CCCCCccEEEccCCCCcccCCCCc----cccCccEEEccCCcCcccC----ChhccCCcccceeecccccCcc
Q 005120 268 PDL--SRIPNLGYLDLSSNQLNGSIPPGR----LSLNITTIKLSNNKLTGTI----PSNFSGLPRLQRLFIANNSLSG 335 (713)
Q Consensus 268 ~~l--~~l~~L~~L~Ls~N~l~~~ip~~~----~~~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~ 335 (713)
+.+ ..+++|+.|+|++|.+.+..+... ..++|+.|+|+.|.|++.- +..+..+++|+.|+|++|.|+.
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 111 235666666666666553221111 1245556666555555421 2222334556666666665553
No 386
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=98.76 E-value=1.7e-08 Score=106.33 Aligned_cols=85 Identities=18% Similarity=0.300 Sum_probs=66.1
Q ss_pred hcCccc-ccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHH-HHHhhCCCCcccceEEEEEe----CCeE
Q 005120 623 TNNFNS-STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEI-QFLSRLHHRNLVSLVGYCDE----EGEQ 695 (713)
Q Consensus 623 ~~~~~~-~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~-~~l~~l~H~niv~l~g~~~~----~~~~ 695 (713)
.++|.. .++||+|+||.||+|... +|+.||||++.... ...+|+ ..+..++||||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 345666 457999999999999865 58999999996532 222233 34567799999999999865 3458
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
++||||+++|+|.++++
T Consensus 102 ~lv~e~~~gg~L~~~l~ 118 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQ 118 (336)
T ss_dssp EEEEECCTTEEHHHHHH
T ss_pred EEEEeccCCCCHHHHHH
Confidence 99999999999999885
No 387
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.73 E-value=2.3e-08 Score=112.07 Aligned_cols=85 Identities=9% Similarity=0.149 Sum_probs=63.0
Q ss_pred ccccccccCCcEEEEEEEecCCCEEEEEEeccCCcc--------cHHHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEE
Q 005120 627 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 627 ~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~--------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (713)
...+.||+|+||.||+|.. .++.+|+|+....... ..+.|.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467899999999999955 5788999986542211 123589999999999999999888888788888999
Q ss_pred EecCCCCCHHHHhh
Q 005120 699 YEFMSNGTLRDQLS 712 (713)
Q Consensus 699 ~Ey~~~GsL~~~L~ 712 (713)
||||++|+|.++++
T Consensus 418 mE~~~ggsL~~~l~ 431 (540)
T 3en9_A 418 MSYINGKLAKDVIE 431 (540)
T ss_dssp EECCCSEEHHHHST
T ss_pred EECCCCCCHHHHHH
Confidence 99999999999886
No 388
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.73 E-value=3.9e-09 Score=111.81 Aligned_cols=183 Identities=12% Similarity=0.188 Sum_probs=95.2
Q ss_pred cceeEEEcCCCCCcc-c-------cCccccCCCCCCEEECCCCCCC---------cCCCccccCCCCCceEecccCCCCC
Q 005120 82 LHLRELQLLNLNLSG-N-------LSPEIGRLSYLTILDFMWNKIS---------GSIPKEIGNIKSLELLLLNGNELTG 144 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~-~-------~~~~~~~l~~L~~L~Ls~n~i~---------~~~p~~~~~l~~L~~L~L~~N~l~~ 144 (713)
.+++.|.+......+ . +..++..+++|+.|.+..+... +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 467777776554432 1 1233456778888888655321 112333455677777777666211
Q ss_pred cCCccCCCCCCCCEEEccccCCCCCCchhhh--cCCCCCEEEccC--CccccccchhcCCCCCccEEecccCCCcCCCCc
Q 005120 145 SLPEELGYLPKLDRIQIDQNYISGSLPKSFA--NLNKTRHFHMNN--NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPP 220 (713)
Q Consensus 145 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 220 (713)
.++. + .+++|++|+|..|.+.......+. .+++|++|+|+. |...+.. . +.. +..
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~----------------~~~-l~~ 244 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--D----------------MNV-FRP 244 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--C----------------GGG-TGG
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--h----------------HHH-HHH
Confidence 1222 2 256677777766665433333333 456666666542 1111100 0 000 000
Q ss_pred CC--CCCCCCcEEEcccccCCCCCCcccc---cCCCCCCEEEccCCCCccCC----C-CCCCCCCccEEEccCCCCc
Q 005120 221 EL--SELPKLLILQLDNNNFEGTTIPASY---SNMSKLLKLSLRNCSLQGPM----P-DLSRIPNLGYLDLSSNQLN 287 (713)
Q Consensus 221 ~l--~~l~~L~~L~L~~N~l~~~~~~~~~---~~l~~L~~L~L~~N~l~~~~----~-~l~~l~~L~~L~Ls~N~l~ 287 (713)
.+ ..+++|+.|+|.+|.+.. ..+..+ ..+++|++|+|+.|.+.+.. + .+..+++|+.|++++|.++
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~-~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQN-VVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHH-HHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHhcCCCCCcCEEeCCCCCCch-HHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 11 235667777776666643 112122 24667777777777776531 1 2345678888888888776
No 389
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=98.72 E-value=1.5e-08 Score=110.09 Aligned_cols=82 Identities=26% Similarity=0.421 Sum_probs=65.7
Q ss_pred CcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeC----C--eEEE
Q 005120 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE----G--EQML 697 (713)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~----~--~~~l 697 (713)
.|...+.||+|+||.||+|... +|+.||||++..... .+.+|+++|++++|||||++++++... + ..++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 4777889999999999999975 589999999865422 234799999999999999999998542 2 3679
Q ss_pred EEecCCCCCHHHHh
Q 005120 698 VYEFMSNGTLRDQL 711 (713)
Q Consensus 698 V~Ey~~~GsL~~~L 711 (713)
||||+++ +|.+.+
T Consensus 131 v~e~~~~-~l~~~~ 143 (420)
T 1j1b_A 131 VLDYVPE-TVYRVA 143 (420)
T ss_dssp EEECCCE-EHHHHH
T ss_pred ehhcccc-cHHHHH
Confidence 9999996 565543
No 390
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=98.70 E-value=2.7e-08 Score=108.40 Aligned_cols=87 Identities=20% Similarity=0.306 Sum_probs=72.7
Q ss_pred cCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhC------CCCcccceEEEEEeCCeEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL------HHRNLVSLVGYCDEEGEQM 696 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l------~H~niv~l~g~~~~~~~~~ 696 (713)
..|...+.||+|+||.||+|... .++.||||++.... ...+++.+|++++..+ .|+||+++++++...+..+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 45888899999999999999854 48899999997532 2345678888888776 6779999999999999999
Q ss_pred EEEecCCCCCHHHHhh
Q 005120 697 LVYEFMSNGTLRDQLS 712 (713)
Q Consensus 697 lV~Ey~~~GsL~~~L~ 712 (713)
+||||++ |+|.+++.
T Consensus 176 lv~e~~~-~~L~~~l~ 190 (429)
T 3kvw_A 176 MTFELLS-MNLYELIK 190 (429)
T ss_dssp EEECCCC-CBHHHHHH
T ss_pred EEEeccC-CCHHHHHH
Confidence 9999997 68988764
No 391
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=98.70 E-value=3.6e-08 Score=101.44 Aligned_cols=87 Identities=21% Similarity=0.397 Sum_probs=73.4
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEE-EeCCeEEEEEe
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYE 700 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lV~E 700 (713)
.++|...+.||+|+||.||+|.. .+|+.||||++..... .+++.+|+.++.+++|++++..++++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 45788899999999999999985 5689999999875433 24689999999999999988877776 55677899999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|+ +|+|.++++
T Consensus 86 ~~-~~~L~~~~~ 96 (296)
T 3uzp_A 86 LL-GPSLEDLFN 96 (296)
T ss_dssp CC-CCBHHHHHH
T ss_pred ec-CCCHHHHHH
Confidence 99 899999875
No 392
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=98.70 E-value=2e-08 Score=107.18 Aligned_cols=88 Identities=11% Similarity=-0.052 Sum_probs=59.5
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCc---ccHHHHHHHHH---HHhhCCCCcccceE-------EE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ---FLSRLHHRNLVSLV-------GY 688 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~---~l~~l~H~niv~l~-------g~ 688 (713)
..+|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+. .++. +|||||+++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 345788899999999999999964 688999999987543 22345777854 5555 799988755 44
Q ss_pred EEeC-----------------CeEEEEEecCCCCCHHHHhh
Q 005120 689 CDEE-----------------GEQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 689 ~~~~-----------------~~~~lV~Ey~~~GsL~~~L~ 712 (713)
+... ...|+|||||+ |+|.++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~ 179 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFS 179 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHH
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHH
Confidence 4433 23799999999 89999985
No 393
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=98.69 E-value=1.8e-08 Score=105.77 Aligned_cols=87 Identities=24% Similarity=0.396 Sum_probs=73.7
Q ss_pred cCcccccccccCCcEEEEEEEe--cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCc------ccceEEEEEeCCeE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL--PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN------LVSLVGYCDEEGEQ 695 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~--~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~~~ 695 (713)
++|...+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++..++|++ ++++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4688889999999999999985 358899999997532 23457889999998887665 99999999999999
Q ss_pred EEEEecCCCCCHHHHhh
Q 005120 696 MLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (713)
++||||+ +|+|.+++.
T Consensus 93 ~lv~e~~-~~~l~~~l~ 108 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIK 108 (339)
T ss_dssp EEEEECC-CCBHHHHHH
T ss_pred EEEEcCC-CCCHHHHHH
Confidence 9999999 889998874
No 394
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=98.68 E-value=1.8e-08 Score=108.49 Aligned_cols=80 Identities=24% Similarity=0.427 Sum_probs=64.9
Q ss_pred cCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEEEeCCe------EEE
Q 005120 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE------QML 697 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------~~l 697 (713)
..|...+.||+|+||.||+|....+..||+|++...... ..+|+++++.++|||||++++++...+. .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 357788999999999999999877777999988653322 2379999999999999999999965432 789
Q ss_pred EEecCCCCCH
Q 005120 698 VYEFMSNGTL 707 (713)
Q Consensus 698 V~Ey~~~GsL 707 (713)
||||++++.+
T Consensus 116 v~e~~~~~l~ 125 (394)
T 4e7w_A 116 VLEYVPETVY 125 (394)
T ss_dssp EEECCSEEHH
T ss_pred EeeccCccHH
Confidence 9999997543
No 395
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=98.67 E-value=1.8e-08 Score=108.29 Aligned_cols=86 Identities=17% Similarity=0.284 Sum_probs=70.2
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCC--------CCcccceEEEEE----
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH--------HRNLVSLVGYCD---- 690 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~--------H~niv~l~g~~~---- 690 (713)
++|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++.+++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 5688889999999999999985 458899999997542 23467899999999886 788999999987
Q ss_pred eCCeEEEEEecCCCCCHHHHh
Q 005120 691 EEGEQMLVYEFMSNGTLRDQL 711 (713)
Q Consensus 691 ~~~~~~lV~Ey~~~GsL~~~L 711 (713)
.....++||||+ +|+|.+++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~ 135 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWI 135 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHH
T ss_pred CCceEEEEEecc-CccHHHHH
Confidence 345789999999 55666654
No 396
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=98.66 E-value=1.1e-08 Score=106.84 Aligned_cols=91 Identities=21% Similarity=0.436 Sum_probs=75.7
Q ss_pred hhcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcc------cHHHHHHHHHHHhhCC--CCcccceEEEEEeC
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLH--HRNLVSLVGYCDEE 692 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~------~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~ 692 (713)
..++|...+.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.++.+++ |+||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 345688889999999999999985 46889999998653221 1235778999999996 59999999999999
Q ss_pred CeEEEEEecCCC-CCHHHHhh
Q 005120 693 GEQMLVYEFMSN-GTLRDQLS 712 (713)
Q Consensus 693 ~~~~lV~Ey~~~-GsL~~~L~ 712 (713)
+..++|+||+.. |+|.+++.
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~ 141 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFIT 141 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHH
T ss_pred CcEEEEEEcCCCCccHHHHHh
Confidence 999999999986 89998874
No 397
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=98.66 E-value=3.8e-08 Score=102.33 Aligned_cols=86 Identities=19% Similarity=0.289 Sum_probs=62.0
Q ss_pred hcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcc-cH-HHHHHHHHHHhhCCCCcccceEEEEEeCCeEEEEE
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~-~~-~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (713)
.++|...+.||+|+||.||+|... +|+.||||++...... .. +.+.++..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 456778889999999999999975 6899999999764332 22 23445556788889999999999999999999999
Q ss_pred ecCCCCCHHH
Q 005120 700 EFMSNGTLRD 709 (713)
Q Consensus 700 Ey~~~GsL~~ 709 (713)
||+ ++.+.+
T Consensus 104 e~~-~~~~~~ 112 (318)
T 2dyl_A 104 ELM-GTCAEK 112 (318)
T ss_dssp CCC-SEEHHH
T ss_pred ecc-CCcHHH
Confidence 999 344443
No 398
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=98.63 E-value=5.1e-08 Score=100.22 Aligned_cols=87 Identities=21% Similarity=0.400 Sum_probs=69.8
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcccceEEEE-EeCCeEEEEEe
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYE 700 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lV~E 700 (713)
.++|...+.||+|+||.||+|.. .+++.||||++...... +++.+|++++..++|++++..+++| ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 46788899999999999999985 56889999987553322 3588999999999999988888777 55678899999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|+ +|+|.++++
T Consensus 86 ~~-~~~L~~~~~ 96 (296)
T 4hgt_A 86 LL-GPSLEDLFN 96 (296)
T ss_dssp CC-CCBHHHHHH
T ss_pred cc-CCCHHHHHH
Confidence 99 999999875
No 399
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=98.60 E-value=1e-07 Score=105.21 Aligned_cols=87 Identities=22% Similarity=0.366 Sum_probs=71.0
Q ss_pred hcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCC-cccceEEEEEeCCeEEEEEe
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR-NLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lV~E 700 (713)
.++|...+.||+|+||.||+|.. .+++.||||++...... +++.+|++++..++|+ ++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 35788899999999999999985 56899999988654332 3588999999999775 55556666677888999999
Q ss_pred cCCCCCHHHHhh
Q 005120 701 FMSNGTLRDQLS 712 (713)
Q Consensus 701 y~~~GsL~~~L~ 712 (713)
|+ +|+|.++++
T Consensus 84 ~~-g~sL~~ll~ 94 (483)
T 3sv0_A 84 LL-GPSLEDLFN 94 (483)
T ss_dssp CC-CCBHHHHHH
T ss_pred CC-CCCHHHHHH
Confidence 99 999999875
No 400
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=98.59 E-value=3.2e-08 Score=105.47 Aligned_cols=87 Identities=18% Similarity=0.314 Sum_probs=72.7
Q ss_pred cCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCcccHHHHHHHHHHHhhCC-----------CCcccceEEEEEe
Q 005120 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----------HRNLVSLVGYCDE 691 (713)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~niv~l~g~~~~ 691 (713)
.+|...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++.+++ |+||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5688889999999999999985 468899999997532 23457889999998886 8999999999976
Q ss_pred CC----eEEEEEecCCCCCHHHHhh
Q 005120 692 EG----EQMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 692 ~~----~~~lV~Ey~~~GsL~~~L~ 712 (713)
.+ ..++||||+ +|+|.+++.
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~ 121 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIK 121 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHH
T ss_pred cCCCCceEEEEEecC-CCCHHHHHH
Confidence 43 689999999 889998874
No 401
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.57 E-value=7.7e-08 Score=98.43 Aligned_cols=88 Identities=13% Similarity=0.105 Sum_probs=67.5
Q ss_pred HHHHhhcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc------------------ccHHHHHHHHHHHhhCCC
Q 005120 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL------------------QGEKEFLTEIQFLSRLHH 679 (713)
Q Consensus 618 ~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~------------------~~~~~f~~E~~~l~~l~H 679 (713)
.+......|...+.||+|+||.||+|...+|+.||||.++.... .....|.+|+++|++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34444556667799999999999999987799999999964321 12346899999999999
Q ss_pred CcccceEEEEEeCCeEEEEEecCCCCCHHH
Q 005120 680 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709 (713)
Q Consensus 680 ~niv~l~g~~~~~~~~~lV~Ey~~~GsL~~ 709 (713)
| +++.+++.. +..|+|||||++|+|.+
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~ 189 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR 189 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH
Confidence 4 666665543 45699999999999987
No 402
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=98.56 E-value=8.4e-08 Score=102.83 Aligned_cols=89 Identities=24% Similarity=0.300 Sum_probs=73.6
Q ss_pred hhcCcccccccccCCcEEEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCC-CC-----cccceEEEEEeCCe
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HR-----NLVSLVGYCDEEGE 694 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~-----niv~l~g~~~~~~~ 694 (713)
..++|...+.||+|+||.||+|... +++.||||+++... ...+++.+|++++..++ |+ +|+++.+++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 4567889999999999999999854 57899999997532 23456788998888884 55 49999999999999
Q ss_pred EEEEEecCCCCCHHHHhh
Q 005120 695 QMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~ 712 (713)
.++||||++ |+|.++++
T Consensus 131 ~~lv~e~~~-~~L~~~l~ 147 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLR 147 (382)
T ss_dssp EEEEEECCC-CBHHHHHH
T ss_pred eEEEEecCC-CCHHHHHh
Confidence 999999997 59998874
No 403
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.56 E-value=4.3e-06 Score=89.24 Aligned_cols=278 Identities=10% Similarity=0.051 Sum_probs=142.8
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEc
Q 005120 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (713)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (713)
.+++.+.+.. +++..-..+|.++.+|+.++|..+ ++.+-..+|.++ +|+.+.+..+ +..+...+|... +|+.+.+
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEF 120 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccC
Confidence 4677777753 466555677888899999998654 665666778776 5777777543 554555556554 7888888
Q ss_pred cccCCCCCCchhhhcCCCCCEEEccCCccccccchhcCCCCCccEEecccCCCcC------------CCCcCCCCCCCCc
Q 005120 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG------------YLPPELSELPKLL 229 (713)
Q Consensus 162 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~------------~~~~~l~~l~~L~ 229 (713)
..+ +..+....|.+. +|+.+.+..+ ++......|.....++.+.+..+.... .....+.....+.
T Consensus 121 p~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
T 4h09_A 121 PGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGT 197 (379)
T ss_dssp CTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCS
T ss_pred CCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccc
Confidence 755 332333444443 4555554433 333444556666666666655433211 0111122233344
Q ss_pred EEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc--cCccEEEccC
Q 005120 230 ILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSN 306 (713)
Q Consensus 230 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~ 306 (713)
.+.+....-. .....+....+|+.+.+..+ ++.... .+.++..|+.+.+..+ ++ .|....+. .+|+.+.+..
T Consensus 198 ~~~~~~~~~~--i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~ 272 (379)
T 4h09_A 198 EFTIPSTVKT--VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYA 272 (379)
T ss_dssp EEECCTTCCE--ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECC
T ss_pred ccccccceeE--Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhccccccc
Confidence 4433322211 12233444555665555433 222222 4455556666665544 33 33333333 4555555543
Q ss_pred CcCcccCChhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcCCC-CC-CCCceEEEe
Q 005120 307 NKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-FN-IPPNVTVRL 379 (713)
Q Consensus 307 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~-~~-~~~l~~l~l 379 (713)
+ +.......|.++++|+.+.+.++.++..-...|. ++.+|+.++|..+ ++.|... +. ..+|+.+.+
T Consensus 273 ~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~-----~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 273 K-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFM-----DCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp C-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTT-----TCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred c-ceeccccccccccccccccccccccceehhhhhc-----CCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 3 4434445566666666666666555522223333 4555666666433 5544432 21 344544444
No 404
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.50 E-value=1.3e-07 Score=99.83 Aligned_cols=88 Identities=18% Similarity=0.342 Sum_probs=72.2
Q ss_pred hcCcccccccccCCcEEEEEEEec-CC-CEEEEEEeccCCcccHHHHHHHHHHHhhCCCCc------ccceEEEEEeCCe
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILP-DG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN------LVSLVGYCDEEGE 694 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g-~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~~ 694 (713)
.++|...+.||+|+||.||+|... .+ +.||||+++... ...+.+.+|+.++.+++|++ ++.+.+++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 357888899999999999999863 34 689999997532 23457889999999998776 9999999999999
Q ss_pred EEEEEecCCCCCHHHHhh
Q 005120 695 QMLVYEFMSNGTLRDQLS 712 (713)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~ 712 (713)
.++||||+ +|+|.+++.
T Consensus 97 ~~lv~e~~-~~~l~~~l~ 113 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLK 113 (355)
T ss_dssp EEEEEECC-CCBHHHHHH
T ss_pred EEEEEecc-CCChHHHHH
Confidence 99999999 567777653
No 405
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.41 E-value=2.7e-05 Score=82.94 Aligned_cols=270 Identities=11% Similarity=0.049 Sum_probs=165.8
Q ss_pred CCCCCcceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEecccCCCCCcCCccCCCCCCC
Q 005120 77 MDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKL 156 (713)
Q Consensus 77 ~~~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 156 (713)
...++.+|+.+++.. +++..-..+|.++ +|+.+.+..+ +..+...+|.. .+|+.+.+..+ +.......|.+. +|
T Consensus 64 aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~~-~l 137 (379)
T 4h09_A 64 NFNSCYNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYNS-SV 137 (379)
T ss_dssp TTTTCTTCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-CC
T ss_pred HhhCCCCCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCc-cccccccccccc-ee
Confidence 345667899999974 4665556778776 6888887654 55444556655 47999998765 333444455554 57
Q ss_pred CEEEccccCCCCCCchhhhcCCCCCEEEccCCccccc------------cchhcCCCCCccEEecccCCCcCCCCcCCCC
Q 005120 157 DRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ------------IPPELSRLPSLVHMLLDNNNLTGYLPPELSE 224 (713)
Q Consensus 157 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~------------~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~ 224 (713)
+.+.+..+ ++.+....|..+.+++.+.+..+..... ....+.....+..+.+.... .......+..
T Consensus 138 ~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~ 215 (379)
T 4h09_A 138 KRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSY 215 (379)
T ss_dssp CEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTTT
T ss_pred eeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce-eEEeeccccc
Confidence 77666543 4445566777888888877765443211 12233344455555544332 2234455666
Q ss_pred CCCCcEEEcccccCCCCCCcccccCCCCCCEEEccCCCCccCCC-CCCCCCCccEEEccCCCCcccCCCCccc--cCccE
Q 005120 225 LPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITT 301 (713)
Q Consensus 225 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~ 301 (713)
..+|+.+.+..+- +. .....+.++.+|+.+.+..+ ++.... .+.++.+|+.+.+..+ ++ .++...+. .+|+.
T Consensus 216 ~~~l~~i~~~~~~-~~-i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~ 290 (379)
T 4h09_A 216 GKNLKKITITSGV-TT-LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTK 290 (379)
T ss_dssp CSSCSEEECCTTC-CE-ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCE
T ss_pred ccccceeeeccce-eE-EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-ecccccccccccccc
Confidence 6777777776542 21 23345677778888877655 444433 5667777888877544 44 45555444 67888
Q ss_pred EEccCCcCcccCChhccCCcccceeecccccCcccCCchhhhhccCCCCCccEEEccCCcCCCcC
Q 005120 302 IKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS 366 (713)
Q Consensus 302 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~ 366 (713)
+.+.++.++.....+|.++.+|+.+.|..+ ++..-..+|. ++.+|+.+.+..+ ++.|.
T Consensus 291 i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~-----~C~~L~~i~ip~~-v~~I~ 348 (379)
T 4h09_A 291 VVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFK-----NCKALSTISYPKS-ITLIE 348 (379)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-----TCTTCCCCCCCTT-CCEEC
T ss_pred ccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhh-----CCCCCCEEEECCc-cCEEc
Confidence 888877777666777888888888888654 5522233444 5667777777544 65554
No 406
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.34 E-value=3.3e-07 Score=103.24 Aligned_cols=81 Identities=17% Similarity=0.064 Sum_probs=59.3
Q ss_pred cccCCcEEEEEEE-ecCCCEEEEEEeccCCc----------ccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEEEE
Q 005120 632 IGQGGYGKVYKGI-LPDGTVVAVKRAQEGSL----------QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 699 (713)
Q Consensus 632 iG~G~fg~Vy~~~-~~~g~~vavK~l~~~~~----------~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 699 (713)
.+.|+.|.+.++. +--|+.+|||.+..... ...++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666555433 22478899999865321 1235799999999999 8999999999999999999999
Q ss_pred ecCCCCCHHHHhh
Q 005120 700 EFMSNGTLRDQLS 712 (713)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (713)
||++||+|.++|+
T Consensus 322 Eyv~G~~L~d~i~ 334 (569)
T 4azs_A 322 EKLPGRLLSDMLA 334 (569)
T ss_dssp ECCCSEEHHHHHH
T ss_pred ecCCCCcHHHHHH
Confidence 9999999999985
No 407
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.31 E-value=1.1e-07 Score=90.78 Aligned_cols=92 Identities=14% Similarity=0.182 Sum_probs=40.8
Q ss_pred ccccCCCCCCEEECCCC-CCCcC----CCccccCCCCCceEecccCCCCCc----CCccCCCCCCCCEEEccccCCCCC-
Q 005120 100 PEIGRLSYLTILDFMWN-KISGS----IPKEIGNIKSLELLLLNGNELTGS----LPEELGYLPKLDRIQIDQNYISGS- 169 (713)
Q Consensus 100 ~~~~~l~~L~~L~Ls~n-~i~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~- 169 (713)
..+...+.|++|+|++| .+... +...+...++|++|+|++|.+... +.+.+...++|++|+|++|.|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 33445555666666665 55422 122333445555555555555421 112222334455555555554422
Q ss_pred ---CchhhhcCCCCCEEEc--cCCccc
Q 005120 170 ---LPKSFANLNKTRHFHM--NNNSIS 191 (713)
Q Consensus 170 ---~p~~~~~l~~L~~L~L--~~N~l~ 191 (713)
+...+...+.|++|+| ++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2233334444455554 444443
No 408
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.26 E-value=1e-07 Score=91.02 Aligned_cols=92 Identities=20% Similarity=0.207 Sum_probs=53.2
Q ss_pred ccccCCCCCceEecccC-CCCCc----CCccCCCCCCCCEEEccccCCCCC----CchhhhcCCCCCEEEccCCccccc-
Q 005120 124 KEIGNIKSLELLLLNGN-ELTGS----LPEELGYLPKLDRIQIDQNYISGS----LPKSFANLNKTRHFHMNNNSISGQ- 193 (713)
Q Consensus 124 ~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~- 193 (713)
..+...+.|++|+|++| .+... +.+.+...++|++|+|++|.|... +.+.+...+.|++|+|++|.|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34566777778888777 76532 233455566777777777776532 233444556667777777666532
Q ss_pred ---cchhcCCCCCccEEec--ccCCCc
Q 005120 194 ---IPPELSRLPSLVHMLL--DNNNLT 215 (713)
Q Consensus 194 ---~p~~l~~l~~L~~L~L--~~N~l~ 215 (713)
+...+...++|++|+| ++|.++
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2333444455555555 445554
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.23 E-value=6.5e-08 Score=97.23 Aligned_cols=105 Identities=18% Similarity=0.260 Sum_probs=61.5
Q ss_pred ccCCCCCce--EecccCCCC---CcCCccCCCCCCCCEEEccccCCCC--CCchhhhcCCCCCEEEccCCccccccchhc
Q 005120 126 IGNIKSLEL--LLLNGNELT---GSLPEELGYLPKLDRIQIDQNYISG--SLPKSFANLNKTRHFHMNNNSISGQIPPEL 198 (713)
Q Consensus 126 ~~~l~~L~~--L~L~~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 198 (713)
|...+.|+. ++++.|... ..++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|.+. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444444554 555555332 1111112346677777777777776 3446666777777777777777654 223
Q ss_pred CCCC--CccEEecccCCCcCCCCc-------CCCCCCCCcEEE
Q 005120 199 SRLP--SLVHMLLDNNNLTGYLPP-------ELSELPKLLILQ 232 (713)
Q Consensus 199 ~~l~--~L~~L~L~~N~l~~~~~~-------~l~~l~~L~~L~ 232 (713)
..+. +|++|+|++|.+.+..|+ .+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3333 777777777777765442 245667777765
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.16 E-value=1.4e-06 Score=87.52 Aligned_cols=103 Identities=19% Similarity=0.284 Sum_probs=71.5
Q ss_pred CCCCCCE--EECCCCCCC---cCCCccccCCCCCceEecccCCCCC--cCCccCCCCCCCCEEEccccCCCCCCchhhhc
Q 005120 104 RLSYLTI--LDFMWNKIS---GSIPKEIGNIKSLELLLLNGNELTG--SLPEELGYLPKLDRIQIDQNYISGSLPKSFAN 176 (713)
Q Consensus 104 ~l~~L~~--L~Ls~n~i~---~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 176 (713)
..+.|.. ++++.|... ..++....++++|++|+|++|++++ .+|+.+..+++|+.|+|++|+|++. ..+..
T Consensus 139 ~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~ 216 (267)
T 3rw6_A 139 SDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDK 216 (267)
T ss_dssp GCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGG
T ss_pred CCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhh
Confidence 3344444 667777433 1122223567889999999999887 4456677888999999999998865 33444
Q ss_pred CC--CCCEEEccCCccccccc-------hhcCCCCCccEEe
Q 005120 177 LN--KTRHFHMNNNSISGQIP-------PELSRLPSLVHML 208 (713)
Q Consensus 177 l~--~L~~L~L~~N~l~~~~p-------~~l~~l~~L~~L~ 208 (713)
+. +|+.|+|++|.+.+.+| ..+..+++|+.||
T Consensus 217 l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 217 IKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 44 89999999999887554 2466788888876
No 411
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=97.97 E-value=4.5e-06 Score=84.00 Aligned_cols=82 Identities=21% Similarity=0.120 Sum_probs=58.6
Q ss_pred cccccccccCCcEEEEEEEe-cCCCE--EEEEEeccCCcc------------------------cHHHHHHHHHHHhhCC
Q 005120 626 FNSSTQIGQGGYGKVYKGIL-PDGTV--VAVKRAQEGSLQ------------------------GEKEFLTEIQFLSRLH 678 (713)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~--vavK~l~~~~~~------------------------~~~~f~~E~~~l~~l~ 678 (713)
|...+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++.+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45668899999999999997 67888 999987543111 0125789999999998
Q ss_pred CCcc--cceEEEEEeCCeEEEEEecCCC-C----CHHHHh
Q 005120 679 HRNL--VSLVGYCDEEGEQMLVYEFMSN-G----TLRDQL 711 (713)
Q Consensus 679 H~ni--v~l~g~~~~~~~~~lV~Ey~~~-G----sL~~~L 711 (713)
|+++ ...+++ +..+|||||+.+ | +|.++.
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~ 164 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELG 164 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHG
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHh
Confidence 8864 333332 346899999942 4 666553
No 412
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=97.73 E-value=2.3e-05 Score=84.64 Aligned_cols=58 Identities=16% Similarity=0.056 Sum_probs=46.3
Q ss_pred hhcCcccccccccCCcEEEEEEEe-cCCCEEEEEEeccCCc---ccHHHHHHHHHHHhhCCC
Q 005120 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHH 679 (713)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H 679 (713)
.+..|...+.||+|+||.||+|.. .+|+.||||++..... ...+.|.+|+.++..++|
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~ 137 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 137 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence 345577788999999999999994 5689999999874322 224679999999999987
No 413
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=97.69 E-value=6.5e-06 Score=86.95 Aligned_cols=84 Identities=13% Similarity=0.228 Sum_probs=54.1
Q ss_pred CcccccccccCCcEEEEEEEecCCCEEEEEEeccCCc--------------ccHHHHH--------HHHHHHhhCCCCcc
Q 005120 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--------------QGEKEFL--------TEIQFLSRLHHRNL 682 (713)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~--------------~~~~~f~--------~E~~~l~~l~H~ni 682 (713)
-|.....||+|+||.||+|.-.+|+.||||.++.... .....+. +|...|.++.+..+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3677889999999999999988899999998753210 0111222 35555555544433
Q ss_pred cceEEEEEeCCeEEEEEecCCCCCHHHH
Q 005120 683 VSLVGYCDEEGEQMLVYEFMSNGTLRDQ 710 (713)
Q Consensus 683 v~l~g~~~~~~~~~lV~Ey~~~GsL~~~ 710 (713)
....-+... ..+|||||++++.|.++
T Consensus 176 ~vp~p~~~~--~~~LVME~i~G~~L~~l 201 (397)
T 4gyi_A 176 PVPEPIAQS--RHTIVMSLVDALPMRQV 201 (397)
T ss_dssp SCCCEEEEE--TTEEEEECCSCEEGGGC
T ss_pred CCCeeeecc--CceEEEEecCCccHhhh
Confidence 221112222 23799999999888664
No 414
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.61 E-value=1.6e-05 Score=74.09 Aligned_cols=34 Identities=6% Similarity=0.066 Sum_probs=18.0
Q ss_pred ceeEEEcCCCCCccccCccccCCCCCCEEECCCC
Q 005120 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWN 116 (713)
Q Consensus 83 ~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n 116 (713)
+|+.||++++.++..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555554443344455555555555555
No 415
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.61 E-value=3e-05 Score=72.26 Aligned_cols=83 Identities=10% Similarity=0.048 Sum_probs=42.6
Q ss_pred CCCCEEECCCCCCCcCCCccccCCCCCceEecccCC-CCCcCCccCCCC----CCCCEEEccccC-CCCCCchhhhcCCC
Q 005120 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE-LTGSLPEELGYL----PKLDRIQIDQNY-ISGSLPKSFANLNK 179 (713)
Q Consensus 106 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 179 (713)
.+|+.||++++.|+..--..+.++++|++|+|++|. ++..--..+..+ ++|++|+|++|. |+..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356777777777665444455666666666666663 442222223332 245555555553 44322233444555
Q ss_pred CCEEEccCC
Q 005120 180 TRHFHMNNN 188 (713)
Q Consensus 180 L~~L~L~~N 188 (713)
|++|+++++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555554
No 416
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.12 E-value=0.00056 Score=60.58 Aligned_cols=58 Identities=24% Similarity=0.329 Sum_probs=43.1
Q ss_pred eeecccccCc-ccCCchhhhhccCCCCCccEEEccCCcCCCcCCCCC--CCCceEEEecCCCCCCCCC
Q 005120 325 RLFIANNSLS-GSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFN--IPPNVTVRLRGNPFCLNTN 389 (713)
Q Consensus 325 ~L~L~~N~l~-~~~p~~~~~~~~l~~~~L~~L~ls~N~l~~i~~~~~--~~~l~~l~l~~N~~~~~~~ 389 (713)
.++.+++.++ ..+|..+. .+|+.|+|++|+|+.++.... +++++.|+|++|||.|++.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp-------~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP-------VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC-------TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred EEEeCCCCCccccCCCCCC-------cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 5666777765 35665443 457788888888888876542 7889999999999999874
No 417
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=97.10 E-value=0.0011 Score=66.27 Aligned_cols=87 Identities=10% Similarity=0.068 Sum_probs=68.4
Q ss_pred hcCcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCcccceEEEEEeCCeEEEEEec
Q 005120 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEF 701 (713)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey 701 (713)
...|......+.|+.+.||+... ++..+++|+..........++.+|++++..+ .|..+.++++++...+..|+||||
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~ 91 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE 91 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred hccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence 34566667788888899999875 3688999998652212234588999999988 467788899999888899999999
Q ss_pred CCCCCHHHH
Q 005120 702 MSNGTLRDQ 710 (713)
Q Consensus 702 ~~~GsL~~~ 710 (713)
+++.+|.+.
T Consensus 92 i~G~~l~~~ 100 (263)
T 3tm0_A 92 ADGVLCSEE 100 (263)
T ss_dssp CSSEEHHHH
T ss_pred cCCeehhhc
Confidence 999998764
No 418
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.10 E-value=0.00067 Score=69.13 Aligned_cols=76 Identities=20% Similarity=0.241 Sum_probs=61.0
Q ss_pred cccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCC---cccceEEEEEeCCeEEEEEecCCC
Q 005120 628 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCDEEGEQMLVYEFMSN 704 (713)
Q Consensus 628 ~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lV~Ey~~~ 704 (713)
..+.++.|.++.||+....+|+.++||+...........|.+|++.|+.++|. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 45678999999999999888999999997544333345789999999999876 477777763 35899999999
Q ss_pred CCH
Q 005120 705 GTL 707 (713)
Q Consensus 705 GsL 707 (713)
+.+
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 419
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.84 E-value=0.0017 Score=57.34 Aligned_cols=57 Identities=25% Similarity=0.433 Sum_probs=44.9
Q ss_pred cEEEccCCCCc-ccCCCCccccCccEEEccCCcCcccCChhccCCcccceeecccccCc
Q 005120 277 GYLDLSSNQLN-GSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (713)
Q Consensus 277 ~~L~Ls~N~l~-~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (713)
..++.+++.++ ..+|.. +..+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~-lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTA-FPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSC-CCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCC-CCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36777777775 356654 5567888999999988777778888999999999999886
No 420
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.76 E-value=0.00039 Score=65.95 Aligned_cols=41 Identities=15% Similarity=0.131 Sum_probs=20.4
Q ss_pred cCCCCCCEEECCCC-CCCcC----CCccccCCCCCceEecccCCCC
Q 005120 103 GRLSYLTILDFMWN-KISGS----IPKEIGNIKSLELLLLNGNELT 143 (713)
Q Consensus 103 ~~l~~L~~L~Ls~n-~i~~~----~p~~~~~l~~L~~L~L~~N~l~ 143 (713)
.+-+.|++|+|++| +|... +-.++..-+.|++|+|++|.+.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC
Confidence 34456666777664 55421 1223334445555555555554
No 421
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.68 E-value=0.00044 Score=65.59 Aligned_cols=62 Identities=24% Similarity=0.217 Sum_probs=29.8
Q ss_pred cceeEEEcCCC-CCccc----cCccccCCCCCCEEECCCCCCCcCC----CccccCCCCCceEecccCCCC
Q 005120 82 LHLRELQLLNL-NLSGN----LSPEIGRLSYLTILDFMWNKISGSI----PKEIGNIKSLELLLLNGNELT 143 (713)
Q Consensus 82 ~~l~~L~l~~~-~l~~~----~~~~~~~l~~L~~L~Ls~n~i~~~~----p~~~~~l~~L~~L~L~~N~l~ 143 (713)
..++.|+|+++ .+... +...+..-+.|+.|+|++|+|.... -..+..-+.|++|+|+.|.|+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 34556666553 44321 2233444455666666666655221 122233445555555555554
No 422
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=96.60 E-value=0.0017 Score=64.55 Aligned_cols=81 Identities=19% Similarity=0.189 Sum_probs=59.7
Q ss_pred CcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcc--cceEEEEEeCCeEEEEEecC
Q 005120 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL--VSLVGYCDEEGEQMLVYEFM 702 (713)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~ni--v~l~g~~~~~~~~~lV~Ey~ 702 (713)
.+....+.+.|..+.||+....+|..++||...... ...+.+|++++..+++.++ .+++++....+..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 343333334566799999987778889999876532 2357789999988855454 45888887777889999999
Q ss_pred CCCCHH
Q 005120 703 SNGTLR 708 (713)
Q Consensus 703 ~~GsL~ 708 (713)
++.+|.
T Consensus 98 ~G~~l~ 103 (264)
T 1nd4_A 98 PGQDLL 103 (264)
T ss_dssp SSEETT
T ss_pred CCcccC
Confidence 998774
No 423
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=94.18 E-value=0.049 Score=36.08 Aligned_cols=30 Identities=20% Similarity=0.461 Sum_probs=19.5
Q ss_pred CCCCccchhhhHHHHHHHHHHHHHHHHHHH
Q 005120 555 SGISKAALAGIILGAIAGAVTISAIVSLLI 584 (713)
Q Consensus 555 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 584 (713)
++.+...++++++|+++++.+++++.++++
T Consensus 6 ~~ls~GaIAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 6 RGLTGGEIVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceeeeehHHHHHHHHHHHHHHHHe
Confidence 345667888888888776665555444433
No 424
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=93.65 E-value=0.11 Score=52.39 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=55.9
Q ss_pred cccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCC---cccceEEEEEeCCeEEEEEecC
Q 005120 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCDEEGEQMLVYEFM 702 (713)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lV~Ey~ 702 (713)
+.....+|.|..+.||+.++.+|+.|.||+-..........|.+|++.|+.+.-. -+.+.+++ . ..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEee
Confidence 4445678999999999999999999999987654433344688999988877322 23344443 2 237899999
Q ss_pred CCCCH
Q 005120 703 SNGTL 707 (713)
Q Consensus 703 ~~GsL 707 (713)
+.+..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87653
No 425
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=92.95 E-value=0.062 Score=56.15 Aligned_cols=78 Identities=18% Similarity=0.368 Sum_probs=55.3
Q ss_pred ccccccCCcEEEEEEEecCCCEEEEEEec--cCCc-ccHHHHHHHHHHHhhCC--CCcccceEEEEEeC---CeEEEEEe
Q 005120 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQ--EGSL-QGEKEFLTEIQFLSRLH--HRNLVSLVGYCDEE---GEQMLVYE 700 (713)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~g~~vavK~l~--~~~~-~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~---~~~~lV~E 700 (713)
.+.++.|.++.||+....+ ..+++|+.. .... ....++.+|.+++..++ +..+.++++++... +..|+|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4568899999999988754 578888775 3321 12346788999999886 45578899988765 45799999
Q ss_pred cCCCCCH
Q 005120 701 FMSNGTL 707 (713)
Q Consensus 701 y~~~GsL 707 (713)
|+++..+
T Consensus 122 ~v~G~~l 128 (359)
T 3dxp_A 122 FVSGRVL 128 (359)
T ss_dssp CCCCBCC
T ss_pred ecCCeec
Confidence 9998876
No 426
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=92.47 E-value=0.19 Score=34.37 Aligned_cols=12 Identities=25% Similarity=0.313 Sum_probs=4.9
Q ss_pred chhhhHHHHHHH
Q 005120 561 ALAGIILGAIAG 572 (713)
Q Consensus 561 ~~~~i~~~~~~~ 572 (713)
.+++.+++.+++
T Consensus 12 ~IA~gVVgGv~~ 23 (44)
T 2ks1_B 12 SIATGMVGALLL 23 (44)
T ss_dssp SSTHHHHHHHHH
T ss_pred eEEeehhHHHHH
Confidence 344444443333
No 427
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=92.03 E-value=0.17 Score=34.50 Aligned_cols=8 Identities=25% Similarity=0.522 Sum_probs=3.3
Q ss_pred chhhhHHH
Q 005120 561 ALAGIILG 568 (713)
Q Consensus 561 ~~~~i~~~ 568 (713)
.+++.++|
T Consensus 11 aIA~gVVg 18 (44)
T 2l2t_A 11 LIAAGVIG 18 (44)
T ss_dssp HHHHHHHH
T ss_pred eEEEeehH
Confidence 34444443
No 428
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=90.73 E-value=0.32 Score=33.14 Aligned_cols=28 Identities=21% Similarity=0.453 Sum_probs=12.7
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 005120 560 AALAGIILGAIAGAVTISAIVSLLIVRAH 588 (713)
Q Consensus 560 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 588 (713)
..+++.++| +..++++++.++++++||+
T Consensus 12 ~~Ia~~vVG-vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 12 TSIISAVVG-ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHH-HHHHHHHHHHHHhheehhh
Confidence 346666666 3333333333344444433
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=90.56 E-value=0.61 Score=47.52 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=58.9
Q ss_pred ccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCC---CCcccceEEEEEeCCeEEEEEecCCCC
Q 005120 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (713)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~Ey~~~G 705 (713)
.+.|+.|.+..+|+... ++..++||+-... ....|.+|.+.|..+. ...+.+.++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45689999999999876 4677888887542 2456889988888773 356778898888778899999999987
Q ss_pred CH
Q 005120 706 TL 707 (713)
Q Consensus 706 sL 707 (713)
.+
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 430
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=89.32 E-value=0.9 Score=44.82 Aligned_cols=77 Identities=13% Similarity=0.141 Sum_probs=55.5
Q ss_pred ccccCCcE-EEEEEEec-CCCEEEEEEeccCCcccHHHHHHHHHHHhhCC-CCcccceEEEEEeCCeEEEEEecCCCCCH
Q 005120 631 QIGQGGYG-KVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (713)
Q Consensus 631 ~iG~G~fg-~Vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (713)
.+..|..| .||+-... ++..+.||+-... ...++.+|.+.|+.+. +--+-++++++...+..|+||||+++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34556555 68987654 4567888876532 2456888999988773 33355788999888999999999998876
Q ss_pred HHH
Q 005120 708 RDQ 710 (713)
Q Consensus 708 ~~~ 710 (713)
.+.
T Consensus 108 ~~~ 110 (272)
T 4gkh_A 108 FQV 110 (272)
T ss_dssp HHH
T ss_pred ccc
Confidence 553
No 431
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=88.61 E-value=0.51 Score=49.87 Aligned_cols=75 Identities=19% Similarity=0.112 Sum_probs=48.5
Q ss_pred ccccccCCcEEEEEEEec-CCCEEEEEEeccCCc-------ccHHHHHHHHHHHhhCCC--Cccc-ceEEEEEeCCeEEE
Q 005120 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-------QGEKEFLTEIQFLSRLHH--RNLV-SLVGYCDEEGEQML 697 (713)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~f~~E~~~l~~l~H--~niv-~l~g~~~~~~~~~l 697 (713)
.+.+|.|.++.||++... +++.++||....... .....+.+|.+++..+.+ +..+ +++.+ ..+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 356899999999999754 467899998643211 112346778888887632 3444 45543 3455689
Q ss_pred EEecCCCC
Q 005120 698 VYEFMSNG 705 (713)
Q Consensus 698 V~Ey~~~G 705 (713)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 432
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=86.58 E-value=0.084 Score=57.32 Aligned_cols=60 Identities=5% Similarity=0.046 Sum_probs=17.7
Q ss_pred ccccccCCcEEEEEEEecC-CCEEEE------EEeccCCcc--cHHHHHHHHHHHhhCCCCcccceEEEEEe
Q 005120 629 STQIGQGGYGKVYKGILPD-GTVVAV------KRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (713)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~-g~~vav------K~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 691 (713)
.+.+| ||.||+|.+.. ..+||| |+.+..... ...+|.+|..++.+.+|+|+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 34566 99999999864 367888 776653322 23579999999999999999999988753
No 433
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=84.01 E-value=2.3 Score=44.22 Aligned_cols=73 Identities=8% Similarity=0.075 Sum_probs=55.0
Q ss_pred ccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCc--ccceEEEEEeC-CeEEEEEecCCCC
Q 005120 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLVGYCDEE-GEQMLVYEFMSNG 705 (713)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~-~~~~lV~Ey~~~G 705 (713)
...++.|....+|+... +|..+++|.-... ..+.+|+.++..+.... +.++++++... +..|+||||+++.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 45688999999999875 5778888877432 25888999998886544 45677777654 5689999999976
Q ss_pred CH
Q 005120 706 TL 707 (713)
Q Consensus 706 sL 707 (713)
.+
T Consensus 120 ~l 121 (362)
T 3ovc_A 120 TL 121 (362)
T ss_dssp ET
T ss_pred Cc
Confidence 55
No 434
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=83.55 E-value=1.3 Score=45.21 Aligned_cols=74 Identities=9% Similarity=0.171 Sum_probs=52.4
Q ss_pred CcccccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCC---C-cccceEEEEEeCCeEEEEEe
Q 005120 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH---R-NLVSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H---~-niv~l~g~~~~~~~~~lV~E 700 (713)
.+...+.++.|....||+. |..+++|+.... .....+.+|.+++..+.+ + .+.+++++ +..|+|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 3445567899999999987 566788876432 113458899999888866 2 23344544 56689999
Q ss_pred cCCCCCHH
Q 005120 701 FMSNGTLR 708 (713)
Q Consensus 701 y~~~GsL~ 708 (713)
|+++..+.
T Consensus 108 ~i~G~~l~ 115 (320)
T 3r70_A 108 YIKGERIT 115 (320)
T ss_dssp CCCCBCCC
T ss_pred ecCCcccc
Confidence 99998875
No 435
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=79.67 E-value=3 Score=42.14 Aligned_cols=74 Identities=20% Similarity=0.209 Sum_probs=52.8
Q ss_pred cccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCC---cccceEEEEE-eCCeEEEEEecCCCC
Q 005120 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCD-EEGEQMLVYEFMSNG 705 (713)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~-~~~~~~lV~Ey~~~G 705 (713)
..++.|....||+. |..++||.-.. ......+.+|.++|..+.+. -+.+.++++. ..+..++||||+++.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 45788888899987 56677877422 22245688999999998653 2456677764 345678999999987
Q ss_pred CHHH
Q 005120 706 TLRD 709 (713)
Q Consensus 706 sL~~ 709 (713)
.+.+
T Consensus 99 ~l~~ 102 (306)
T 3tdw_A 99 ILGE 102 (306)
T ss_dssp ECHH
T ss_pred ECch
Confidence 7754
No 436
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=78.09 E-value=0.88 Score=47.10 Aligned_cols=79 Identities=4% Similarity=-0.014 Sum_probs=53.3
Q ss_pred ccc-ccCCcEEEEEEEec-------CCCEEEEEEeccCC---cccHHHHHHHHHHHhhCC-C--CcccceEEEEEeC---
Q 005120 630 TQI-GQGGYGKVYKGILP-------DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLH-H--RNLVSLVGYCDEE--- 692 (713)
Q Consensus 630 ~~i-G~G~fg~Vy~~~~~-------~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~-H--~niv~l~g~~~~~--- 692 (713)
+.| +.|....+|+.... ++..+++|.-.... ......+.+|+.++..++ + -.+.++++++...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 88999999988764 25678888764322 101235678888887773 2 3466788887554
Q ss_pred CeEEEEEecCCCCCHH
Q 005120 693 GEQMLVYEFMSNGTLR 708 (713)
Q Consensus 693 ~~~~lV~Ey~~~GsL~ 708 (713)
+..|+||||+++..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999987654
No 437
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=74.64 E-value=3.5 Score=28.09 Aligned_cols=22 Identities=9% Similarity=0.252 Sum_probs=14.8
Q ss_pred cchhhhHHHHHHHHHHHHHHHH
Q 005120 560 AALAGIILGAIAGAVTISAIVS 581 (713)
Q Consensus 560 ~~~~~i~~~~~~~~~~~~~~~~ 581 (713)
....+|++|++++++++++++.
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~ 29 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVAL 29 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHH
T ss_pred CCcceEEeehhHHHHHHHHHHH
Confidence 4577777777777777665544
No 438
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=72.97 E-value=3.4 Score=28.14 Aligned_cols=20 Identities=20% Similarity=0.217 Sum_probs=12.2
Q ss_pred chhhhHHHHHHHHHHHHHHH
Q 005120 561 ALAGIILGAIAGAVTISAIV 580 (713)
Q Consensus 561 ~~~~i~~~~~~~~~~~~~~~ 580 (713)
...+|++|++++++++++++
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~ 27 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVG 27 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEeehHHHHHHHHHH
Confidence 46677777777665544443
No 439
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=70.23 E-value=3.1 Score=27.85 Aligned_cols=13 Identities=31% Similarity=0.468 Sum_probs=5.1
Q ss_pred hHHHHHHHHHHHH
Q 005120 565 IILGAIAGAVTIS 577 (713)
Q Consensus 565 i~~~~~~~~~~~~ 577 (713)
+++++++++++++
T Consensus 15 I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 15 VIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 3344444433333
No 440
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=66.32 E-value=7.5 Score=39.37 Aligned_cols=73 Identities=22% Similarity=0.288 Sum_probs=41.0
Q ss_pred cccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhC-----CCCcccceE-E--EEEeCCeEEEEEec
Q 005120 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-----HHRNLVSLV-G--YCDEEGEQMLVYEF 701 (713)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-----~H~niv~l~-g--~~~~~~~~~lV~Ey 701 (713)
..++.|..+.||+....+| .+++|+.... ..+...|.+++..+ ..|.++... | +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3456677889999887555 4889988652 12333444444433 334444311 1 11246678999999
Q ss_pred CCCCCH
Q 005120 702 MSNGTL 707 (713)
Q Consensus 702 ~~~GsL 707 (713)
+++..+
T Consensus 113 i~G~~~ 118 (346)
T 2q83_A 113 IEGRPF 118 (346)
T ss_dssp CCCBCC
T ss_pred ecCccC
Confidence 998654
No 441
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=62.96 E-value=3.1 Score=41.82 Aligned_cols=75 Identities=13% Similarity=0.131 Sum_probs=49.4
Q ss_pred ccccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhC-CCCc--ccceEEEEEeCC---eEEEEEecC
Q 005120 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRN--LVSLVGYCDEEG---EQMLVYEFM 702 (713)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~n--iv~l~g~~~~~~---~~~lV~Ey~ 702 (713)
.+.++.|.+..||+.. ..+++|.-... .....+.+|.+++..+ .+.. +.+.++.....+ ..|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 3458999999999753 45788875432 2345688999999887 3333 234444433322 348999999
Q ss_pred CCCCHHH
Q 005120 703 SNGTLRD 709 (713)
Q Consensus 703 ~~GsL~~ 709 (713)
++..|.+
T Consensus 99 ~G~~l~~ 105 (304)
T 3sg8_A 99 KGVPLTP 105 (304)
T ss_dssp CCEECCH
T ss_pred CCeECCc
Confidence 9877653
No 442
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=58.58 E-value=9.3 Score=24.25 Aligned_cols=22 Identities=36% Similarity=0.526 Sum_probs=14.0
Q ss_pred CccchhhhHHHHHHHHHHHHHH
Q 005120 558 SKAALAGIILGAIAGAVTISAI 579 (713)
Q Consensus 558 ~~~~~~~i~~~~~~~~~~~~~~ 579 (713)
+...+++++++.+++.+++++.
T Consensus 5 ~~gaIaGIVvgdi~~t~~i~~~ 26 (33)
T 2l34_A 5 SPGVLAGIVVGDLVLTVLIALA 26 (33)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEeEeHHHHHHHHHHHHH
Confidence 4467788888877665544433
No 443
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=50.50 E-value=17 Score=26.80 Aligned_cols=18 Identities=28% Similarity=0.538 Sum_probs=10.5
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 005120 565 IILGAIAGAVTISAIVSL 582 (713)
Q Consensus 565 i~~~~~~~~~~~~~~~~~ 582 (713)
+++|.++++++++.+.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 566666666655555444
No 444
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=49.98 E-value=31 Score=34.52 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=46.9
Q ss_pred ccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCCC--cccceEEE-----EEeCCeEEEEEecCC
Q 005120 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR--NLVSLVGY-----CDEEGEQMLVYEFMS 703 (713)
Q Consensus 631 ~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~--niv~l~g~-----~~~~~~~~lV~Ey~~ 703 (713)
.++ |....||+....+|+.+++|....... ...++..|..++..++.. .+.+++.. ....+..++||||++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 777899988776777899999864321 234566777777665321 23334432 123456789999998
Q ss_pred CCC
Q 005120 704 NGT 706 (713)
Q Consensus 704 ~Gs 706 (713)
+..
T Consensus 111 G~~ 113 (328)
T 1zyl_A 111 GRQ 113 (328)
T ss_dssp CEE
T ss_pred CCC
Confidence 754
No 445
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=44.30 E-value=20 Score=27.91 Aligned_cols=16 Identities=13% Similarity=0.258 Sum_probs=6.8
Q ss_pred hhhHHHHHHHHHHHHH
Q 005120 563 AGIILGAIAGAVTISA 578 (713)
Q Consensus 563 ~~i~~~~~~~~~~~~~ 578 (713)
.+++.|++++++++.+
T Consensus 11 ~~Iv~gvi~gilliGl 26 (79)
T 2knc_B 11 LVVLLSVMGAILLIGL 26 (79)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHH
Confidence 3444444444443333
No 446
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=41.52 E-value=31 Score=36.19 Aligned_cols=73 Identities=11% Similarity=0.132 Sum_probs=44.5
Q ss_pred ccccccCCcEEEEEEEecCCCEEEEEEeccC------C-c--ccHHHHHHHHHHHh-hCCCCcccceEEEEEeCCeEEEE
Q 005120 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEG------S-L--QGEKEFLTEIQFLS-RLHHRNLVSLVGYCDEEGEQMLV 698 (713)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~------~-~--~~~~~f~~E~~~l~-~l~H~niv~l~g~~~~~~~~~lV 698 (713)
.+.+|.|....||+... +++.++||..... . . .....+..|+..+. ...+..+.+++++. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 35688999999999864 5678999943210 0 0 12233444443332 22234555666665 5667899
Q ss_pred EecC-CC
Q 005120 699 YEFM-SN 704 (713)
Q Consensus 699 ~Ey~-~~ 704 (713)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 447
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=40.74 E-value=46 Score=21.68 Aligned_cols=22 Identities=27% Similarity=0.517 Sum_probs=12.1
Q ss_pred cchhhhHHHHHHHHHHHHHHHH
Q 005120 560 AALAGIILGAIAGAVTISAIVS 581 (713)
Q Consensus 560 ~~~~~i~~~~~~~~~~~~~~~~ 581 (713)
..++.++.+++++++-..+++.
T Consensus 10 p~i~lII~~vmaGiIG~IllI~ 31 (40)
T 1afo_A 10 PEITLIIFGVMAGVIGTILLIS 31 (40)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHH
Confidence 3566667776666544333333
No 448
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=40.40 E-value=48 Score=21.69 Aligned_cols=30 Identities=27% Similarity=0.430 Sum_probs=16.4
Q ss_pred CccchhhhHHHHHHHHHHHHHHHH-HHHhhh
Q 005120 558 SKAALAGIILGAIAGAVTISAIVS-LLIVRA 587 (713)
Q Consensus 558 ~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~ 587 (713)
+...-.+.++|++++.++.++++. +.++..
T Consensus 5 ~~~ls~GaIAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 5 SRGLTGGEIVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeeeehHHHHHHHHHHHHHHHHe
Confidence 344556667777766655444444 344443
No 449
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=37.67 E-value=34 Score=23.20 Aligned_cols=31 Identities=10% Similarity=0.176 Sum_probs=19.1
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhhhhccc
Q 005120 561 ALAGIILGAIAGAVTISAIVSLLIVRAHMKN 591 (713)
Q Consensus 561 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (713)
.-...+++.++++++++++...+..+.|+++
T Consensus 9 ~~~~~Ia~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 9 SPLTSIISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhheehhh
Confidence 3455677788885555555555666666554
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=37.45 E-value=58 Score=26.39 Aligned_cols=40 Identities=5% Similarity=-0.017 Sum_probs=17.0
Q ss_pred CCCccccCCCCCceEecccCCCCCcCCccCCCCCCCCEEEc
Q 005120 121 SIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (713)
Q Consensus 121 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (713)
+-..+|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 33344444444544444332 33233344444444444444
No 451
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=35.65 E-value=81 Score=31.49 Aligned_cols=76 Identities=8% Similarity=0.087 Sum_probs=38.3
Q ss_pred ccccCCcEE-EEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCCC--CcccceEEEEEeCCeEEEEEecCCCCCH
Q 005120 631 QIGQGGYGK-VYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (713)
Q Consensus 631 ~iG~G~fg~-Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (713)
.++.|+... +|+....+|..+.+|....... .++..|+.++..+.. -.+.++++++...+ ++|||++++..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence 455555444 5666654466777776543221 123345555555422 23456666643333 789999987777
Q ss_pred HHHh
Q 005120 708 RDQL 711 (713)
Q Consensus 708 ~~~L 711 (713)
.+++
T Consensus 100 ~~~l 103 (333)
T 3csv_A 100 TEVI 103 (333)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
No 452
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=35.26 E-value=54 Score=34.53 Aligned_cols=72 Identities=19% Similarity=0.266 Sum_probs=48.1
Q ss_pred cccccCCcEEEEEEEecC--------CCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcc-cceEEEEEeCCeEEEEEe
Q 005120 630 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E 700 (713)
+.|+.|....+|+...++ +..+.+|+.... .....+.+|..++..+...++ .++++.+. + .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 457788889999998753 467888877431 112456689988887743444 46666542 2 38999
Q ss_pred cCCCCCH
Q 005120 701 FMSNGTL 707 (713)
Q Consensus 701 y~~~GsL 707 (713)
|+++-.|
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9985343
No 453
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=34.81 E-value=79 Score=31.30 Aligned_cols=75 Identities=9% Similarity=0.068 Sum_probs=41.8
Q ss_pred cccccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCC-----CCcccceE-E--EEEeCCeEEEEEec
Q 005120 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----HRNLVSLV-G--YCDEEGEQMLVYEF 701 (713)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-----H~niv~l~-g--~~~~~~~~~lV~Ey 701 (713)
+.|+.|....+|+....+| .+++|...... ...++..|++++..++ -|.++... | +....+..++|+||
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4567788889999887666 57788876521 1224556666666553 23333210 1 11224567899999
Q ss_pred CCCCCH
Q 005120 702 MSNGTL 707 (713)
Q Consensus 702 ~~~GsL 707 (713)
+++..+
T Consensus 105 l~G~~~ 110 (322)
T 2ppq_A 105 LEGMWL 110 (322)
T ss_dssp CCCBCC
T ss_pred CCCcCC
Confidence 997653
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=32.15 E-value=86 Score=25.34 Aligned_cols=42 Identities=17% Similarity=0.071 Sum_probs=22.6
Q ss_pred ccCccccCCCCCCEEECCCCCCCcCCCccccCCCCCceEeccc
Q 005120 97 NLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNG 139 (713)
Q Consensus 97 ~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~ 139 (713)
.-...|.++.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33445556666666666443 3334445566666666666544
No 455
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=29.23 E-value=51 Score=34.09 Aligned_cols=73 Identities=21% Similarity=0.258 Sum_probs=42.4
Q ss_pred cccccCCcEEEEEEEecC--------CCEEEEEEeccCCcccHHHHHHHHHHHhhCCCCcc-cceEEEEEeCCeEEEEEe
Q 005120 630 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVYE 700 (713)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E 700 (713)
+.+..|....+|+...++ ++.+.+|+-... .....++.+|.++++.+.-..+ .++++++. + .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEEE
Confidence 345567777888887642 467888875321 2234567789988887743333 45666553 3 28999
Q ss_pred cCCCCCH
Q 005120 701 FMSNGTL 707 (713)
Q Consensus 701 y~~~GsL 707 (713)
|+++..|
T Consensus 131 ~i~G~~l 137 (379)
T 3feg_A 131 YIPSRPL 137 (379)
T ss_dssp CCSEEEC
T ss_pred EecCccC
Confidence 9997554
No 456
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=22.91 E-value=1e+02 Score=21.88 Aligned_cols=17 Identities=18% Similarity=0.528 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHHH
Q 005120 566 ILGAIAGAVTISAIVSL 582 (713)
Q Consensus 566 ~~~~~~~~~~~~~~~~~ 582 (713)
++++++++++++++++.
T Consensus 16 i~svl~GLllL~li~~~ 32 (54)
T 2knc_A 16 LVGVLGGLLLLTILVLA 32 (54)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33444444444444433
No 457
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=20.80 E-value=1.8e+02 Score=29.08 Aligned_cols=68 Identities=10% Similarity=0.102 Sum_probs=40.3
Q ss_pred ccCCcEEEEEEEecCCCEEEEEEeccCCcccHHHHHHHHHHHhhCC---CCcccceEEE------EEeCCeEEEEEecCC
Q 005120 633 GQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGY------CDEEGEQMLVYEFMS 703 (713)
Q Consensus 633 G~G~fg~Vy~~~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~------~~~~~~~~lV~Ey~~ 703 (713)
|.|....||+....+| .+++|+....... +|+.++..+. -+.+.+.+.. +...+..++||||++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~~------~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHDE------INLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSCC------HHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccch------HHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4444678999987677 8899987654422 3333333331 1113333321 223567899999999
Q ss_pred CCCH
Q 005120 704 NGTL 707 (713)
Q Consensus 704 ~GsL 707 (713)
+..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8655
No 458
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=20.50 E-value=1.1e+02 Score=20.62 Aligned_cols=16 Identities=13% Similarity=0.341 Sum_probs=6.9
Q ss_pred hhhhHHHHHHHHHHHH
Q 005120 562 LAGIILGAIAGAVTIS 577 (713)
Q Consensus 562 ~~~i~~~~~~~~~~~~ 577 (713)
+.+++.|++++++++.
T Consensus 9 ~~~Iv~gvi~~ivliG 24 (43)
T 2k9j_B 9 ILVVLLSVMGAILLIG 24 (43)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred EeehHHHHHHHHHHHH
Confidence 3444445444444333
Done!