BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005122
(713 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BO1|A Chain A, Phosphatidylinositol Phosphate Kinase Type Ii Beta
pdb|1BO1|B Chain B, Phosphatidylinositol Phosphate Kinase Type Ii Beta
Length = 416
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 186/394 (47%), Gaps = 30/394 (7%)
Query: 321 LQLGIRHSVGK--HASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPM 378
L G+ H++ + + V L DF K +++ + F + F++K+YCPM
Sbjct: 46 LMWGVNHTINELSNVPVPVMLMPDDF----KAYSKIKVDNHLFNKENLPSRFKFKEYCPM 101
Query: 379 VFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVL 438
VFR+LRE F ID DY ++ + S G+ G+ F T D RF+IKTV +V +
Sbjct: 102 VFRNLRERFGIDDQDYQNSVTRSAPINS-DSQGRCGTRFLTTYDRRFVIKTVSSEDVAEM 160
Query: 439 IRMLPSYYQHVCQ-YKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKG 497
+L Y+Q + + + NTL+ +F G++ + V G +T +V N+F +HR++DLKG
Sbjct: 161 HNILKKYHQFIVECHGNTLLPQFLGMYRLT-VDGVETYMVVTRNVFSHRLTVHRKYDLKG 219
Query: 498 SSYGR-ITDKPXXXXXXXXXXXXXXXXXXXXXXXSWFQE-LIRQIDRDCEFLEAERIMDY 555
S+ R +DK ++ + ++ RD EFL +IMDY
Sbjct: 220 STVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDY 279
Query: 556 SLLIGLHFRDDYSGDEMKMSPNDKHCLDKRDSDIVGTFMRGYHLLPDMDWVMEGRGPHLR 615
SLL+G+H D +EM++ + + D + G + Y PD +
Sbjct: 280 SLLVGIHDVDRAEQEEMEVEERAEDEECENDG-VGGNLLCSYGTPPDSPGNLLSFPRFFG 338
Query: 616 LGANTPARAQRVSKIEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLE 675
G P+ +D + S+ S+P + V + IIDIL YD KK
Sbjct: 339 PGEFDPS---------VDVY-AMKSHESSPKKE-------VYFMAIIDILTPYDTKKKAA 381
Query: 676 HAYKSLQVDP-SSISAVDPKLYSKRFRDFIHRIF 708
HA K+++ + IS V+P+ YSKRF +F+ I
Sbjct: 382 HAAKTVKHGAGAEISTVNPEQYSKRFNEFMSNIL 415
>pdb|2YBX|A Chain A, Crystal Structure Of Human
Phosphatidylinositol-5-Phosphate 4-Kinase Type-2 Alpha
pdb|2YBX|B Chain B, Crystal Structure Of Human
Phosphatidylinositol-5-Phosphate 4-Kinase Type-2 Alpha
Length = 394
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 189/398 (47%), Gaps = 35/398 (8%)
Query: 317 LMLNLQLGIRHSVGK--HASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKD 374
L+ L G+ HS+ + H + L DF K +++ + F + F++K+
Sbjct: 26 LLSVLMWGVNHSINELSHVQIPVMLMPDDF----KAYSKIKVDNHLFNKENMPSHFKFKE 81
Query: 375 YCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSE 434
YCPMVFR+LRE F ID D+ ++ L S +SG+ F+ + D R++IKT+ +
Sbjct: 82 YCPMVFRNLRERFGIDDQDFQNSLTRSAPLPN-DSQARSGARFHTSYDKRYIIKTITSED 140
Query: 435 VKVLIRMLPSYYQHVCQ-YKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRF 493
V + +L Y+Q++ + + TL+ +F G++ + V G + IV N+F ++R++
Sbjct: 141 VAEMHNILKKYHQYIVECHGITLLPQFLGMYRLN-VDGVEIYVIVTRNVFSHRLSVYRKY 199
Query: 494 DLKGSSYGR-ITDKPXXXXXXXXXXXXXXXXXXXXXXXSWFQEL-IRQIDRDCEFLEAER 551
DLKGS+ R +DK +++ + ++ +D EFL +
Sbjct: 200 DLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLK 259
Query: 552 IMDYSLLIGLHFRDDYSGDEMKMSPNDKHCLDKRDSDIVGTFMRGYHLLPDMDWVMEGRG 611
+MDYSLL+G+H D ++ ++ + ++ +SD GT G PD
Sbjct: 260 LMDYSLLVGIH--DVERAEQEEVECEENDGEEEGESD--GTHPVG--TPPDSPGNTLNSS 313
Query: 612 PHLRLGANTPARAQRVSKIEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDIS 671
P L G P ID + G + ++P + V + II IL YD
Sbjct: 314 PPLAPGEFDP---------NIDVY-GIKCHENSPRKE-------VYFMAIIXILTHYDAK 356
Query: 672 KKLEHAYKSLQVDP-SSISAVDPKLYSKRFRDFIHRIF 708
KK HA K+++ + IS V+P+ YSKRF DFI I
Sbjct: 357 KKAAHAAKTVKHGAGAEISTVNPEQYSKRFLDFIGHIL 394
>pdb|2GK9|A Chain A, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii,
Gamma
pdb|2GK9|B Chain B, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii,
Gamma
pdb|2GK9|C Chain C, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii,
Gamma
pdb|2GK9|D Chain D, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii,
Gamma
Length = 392
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 187/393 (47%), Gaps = 34/393 (8%)
Query: 324 GIRHSVGKHASVMRE--LRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFR 381
G+ HS+ + + V L DF+ K + P H F++K+YCP VFR
Sbjct: 25 GVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRENLPSH----FKFKEYCPQVFR 80
Query: 382 HLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRM 441
+LR+ F ID DY++++ + S G+ F ++ D +IK V ++ +
Sbjct: 81 NLRDRFGIDDQDYLVSLTRNPPSESEGSDGR----FLISYDRTLVIKEVSSEDIADMHSN 136
Query: 442 LPSYYQHVCQ-YKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSY 500
L +Y+Q++ + + NTL+ +F G++ V V + + +VM N+F +HR++DLKGS
Sbjct: 137 LSNYHQYIVKCHGNTLLPQFLGMYRVS-VDNEDSYMLVMRNMFSHRLPVHRKYDLKGSLV 195
Query: 501 GR-ITDKPXXXXXXXXXXXXXXXXXXXXXXXSWFQEL-IRQIDRDCEFLEAERIMDYSLL 558
R +DK +++ + ++ RD EFL +IMDYSLL
Sbjct: 196 SREASDKEKVKELPTLRDMDFLNKNQKVYIGEEEKKIFLEKLKRDVEFLVQLKIMDYSLL 255
Query: 559 IGLHFRDDYSGDEMKMSPNDKHCLDKRDSDIVG--TFMRGYHLLPDMDWVMEGRGPHLRL 616
+G+H D G E P ++ + + +S++ G + L+ EG G ++
Sbjct: 256 LGIH--DIIRGSE----PEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEGIGGYIH- 308
Query: 617 GANTPARAQRVSKIEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEH 676
++ P + E + F+ + S EV+ + G+IDIL YD KK H
Sbjct: 309 -SHRP-----LGPGEFESFIDVYAIRSAEGAPQKEVY----FMGLIDILTQYDAKKKAAH 358
Query: 677 AYKSLQVDP-SSISAVDPKLYSKRFRDFIHRIF 708
A K+++ + IS V P+ Y+KRF DFI IF
Sbjct: 359 AAKTVKHGAGAEISTVHPEQYAKRFLDFITNIF 391
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 21/138 (15%)
Query: 589 IVGTFMRGYHLLPDMDWVMEGRGPHLRLGANTPARAQRVS-------------------K 629
I+G +R L P D++ + +LG P +++ K
Sbjct: 215 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 274
Query: 630 IEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSIS 689
+ D + S H+ S D++ +ID + + L+H Y ++ DP+ +
Sbjct: 275 LFPDSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE 332
Query: 690 AVDPKLYSKRFRDFIHRI 707
A P++Y K+ + H I
Sbjct: 333 APPPQIYDKQLDEREHTI 350
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 21/138 (15%)
Query: 589 IVGTFMRGYHLLPDMDWVMEGRGPHLRLGANTPARAQRVS-------------------K 629
I+G +R L P D++ + +LG P +++ K
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 630 IEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSIS 689
+ D + S H+ S D++ +ID + + L+H Y ++ DP+ +
Sbjct: 274 LFPDSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE 331
Query: 690 AVDPKLYSKRFRDFIHRI 707
A P++Y K+ + H I
Sbjct: 332 APPPQIYDKQLDEREHTI 349
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 21/138 (15%)
Query: 589 IVGTFMRGYHLLPDMDWVMEGRGPHLRLGANTPARAQRVS-------------------K 629
I+G +R L P D++ + +LG P +++ K
Sbjct: 208 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 267
Query: 630 IEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSIS 689
+ D + S H+ S D++ +ID + + L+H Y ++ DP+ +
Sbjct: 268 LFPDSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE 325
Query: 690 AVDPKLYSKRFRDFIHRI 707
A P++Y K+ + H I
Sbjct: 326 APPPQIYDKQLDEREHTI 343
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 21/138 (15%)
Query: 589 IVGTFMRGYHLLPDMDWVMEGRGPHLRLGANTPARAQRVS-------------------K 629
I+G +R L P D++ + +LG P +++ K
Sbjct: 213 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 272
Query: 630 IEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSIS 689
+ D + S H+ S D++ +ID + + L+H Y ++ DP+ +
Sbjct: 273 LFPDSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE 330
Query: 690 AVDPKLYSKRFRDFIHRI 707
A P++Y K+ + H I
Sbjct: 331 APPPQIYDKQLDEREHTI 348
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 21/138 (15%)
Query: 589 IVGTFMRGYHLLPDMDWVMEGRGPHLRLGANTPARAQRVS-------------------K 629
I+G +R L P D++ + +LG P +++ K
Sbjct: 252 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 311
Query: 630 IEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSIS 689
+ D + S H+ S D++ +ID + + L+H Y ++ DP+ +
Sbjct: 312 LFPDSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE 369
Query: 690 AVDPKLYSKRFRDFIHRI 707
A P++Y K+ + H I
Sbjct: 370 APPPQIYDKQLDEREHTI 387
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 21/138 (15%)
Query: 589 IVGTFMRGYHLLPDMDWVMEGRGPHLRLGANTPARAQRVS-------------------K 629
I+G +R L P D++ + +LG P +++ K
Sbjct: 252 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 311
Query: 630 IEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSIS 689
+ D + S H+ S D++ +ID + + L+H Y ++ DP+ +
Sbjct: 312 LFPDSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE 369
Query: 690 AVDPKLYSKRFRDFIHRI 707
A P++Y K+ + H I
Sbjct: 370 APPPQIYDKQLDEREHTI 387
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 21/138 (15%)
Query: 589 IVGTFMRGYHLLPDMDWVMEGRGPHLRLGANTPARAQRVS-------------------K 629
I+G +R L P D++ + +LG P +++ K
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 630 IEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSIS 689
+ D + S H+ S D++ +ID + + L+H Y ++ DP+ +
Sbjct: 274 LFPDSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE 331
Query: 690 AVDPKLYSKRFRDFIHRI 707
A P++Y K+ + H I
Sbjct: 332 APPPQIYDKQLDEREHTI 349
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 21/138 (15%)
Query: 589 IVGTFMRGYHLLPDMDWVMEGRGPHLRLGANTPARAQRVS-------------------K 629
I+G +R L P D++ + +LG P +++ K
Sbjct: 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 266
Query: 630 IEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSIS 689
+ D + S H+ S D++ +ID + + L+H Y ++ DP+ +
Sbjct: 267 LFPDSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE 324
Query: 690 AVDPKLYSKRFRDFIHRI 707
A P++Y K+ + H I
Sbjct: 325 APPPQIYDKQLDEREHTI 342
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 21/138 (15%)
Query: 589 IVGTFMRGYHLLPDMDWVMEGRGPHLRLGANTPARAQRVS-------------------K 629
I+G +R L P D++ + +LG P +++ K
Sbjct: 215 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 274
Query: 630 IEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSIS 689
+ D + S H+ S D++ +ID + + L+H Y ++ DP+ +
Sbjct: 275 LFPDSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE 332
Query: 690 AVDPKLYSKRFRDFIHRI 707
A P++Y K+ + H I
Sbjct: 333 APPPQIYDKQLDEREHTI 350
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 21/138 (15%)
Query: 589 IVGTFMRGYHLLPDMDWVMEGRGPHLRLGANTPARAQRVS-------------------K 629
I+G +R L P D++ + +LG P +++ K
Sbjct: 208 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 267
Query: 630 IEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSIS 689
+ D + S H+ S D++ +ID + + L+H Y ++ DP+ +
Sbjct: 268 LFPDSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE 325
Query: 690 AVDPKLYSKRFRDFIHRI 707
A P++Y K+ + H I
Sbjct: 326 APPPQIYDKQLDEREHTI 343
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 633 DQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVD 692
D + S H+ S D++ +ID + + L+H Y ++ DP+ + A
Sbjct: 270 DSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 327
Query: 693 PKLYSKRFRDFIHRI 707
P++Y K+ + H I
Sbjct: 328 PQIYDKQLDEREHTI 342
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 633 DQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVD 692
D + S H+ S D++ +ID + + L+H Y ++ DP+ + A
Sbjct: 277 DSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 334
Query: 693 PKLYSKRFRDFIHRI 707
P++Y K+ + H I
Sbjct: 335 PQIYDKQLDEREHTI 349
>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|B Chain B, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|C Chain C, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|D Chain D, Peanut Lectin Complexed With C-Lactose
pdb|1V6I|A Chain A, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|B Chain B, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|C Chain C, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|D Chain D, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6J|A Chain A, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|B Chain B, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|C Chain C, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|D Chain D, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6K|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6L|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6M|A Chain A, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|B Chain B, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|C Chain C, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|D Chain D, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|E Chain E, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|F Chain F, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|G Chain G, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|H Chain H, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6N|A Chain A, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|B Chain B, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|C Chain C, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|D Chain D, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|E Chain E, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|F Chain F, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|G Chain G, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|H Chain H, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6O|A Chain A, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|B Chain B, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|C Chain C, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|D Chain D, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|E Chain E, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|F Chain F, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|G Chain G, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|H Chain H, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
Length = 232
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 18/36 (50%)
Query: 101 PSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWSND 136
P+G+ G G G FVGVE DTY S ND
Sbjct: 97 PAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYND 132
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 633 DQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVD 692
D + S H+ S D++ +ID + + L+H Y ++ DP+ + A
Sbjct: 277 DSLFPADSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 334
Query: 693 PKLYSKRFRDFIHRI 707
P++Y K+ + H I
Sbjct: 335 PQIYDKQLDEREHTI 349
>pdb|2PEL|A Chain A, Peanut Lectin
pdb|2PEL|B Chain B, Peanut Lectin
pdb|2PEL|C Chain C, Peanut Lectin
pdb|2PEL|D Chain D, Peanut Lectin
pdb|2TEP|A Chain A, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|B Chain B, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|C Chain C, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|D Chain D, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|1CIW|A Chain A, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|B Chain B, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|C Chain C, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|D Chain D, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1QF3|A Chain A, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|B Chain B, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|C Chain C, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|D Chain D, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1CR7|A Chain A, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|B Chain B, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|C Chain C, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|D Chain D, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|E Chain E, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|F Chain F, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|G Chain G, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|H Chain H, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CQ9|A Chain A, Peanut Lectin-Triclinic Form
pdb|1CQ9|B Chain B, Peanut Lectin-Triclinic Form
pdb|1CQ9|C Chain C, Peanut Lectin-Triclinic Form
pdb|1CQ9|D Chain D, Peanut Lectin-Triclinic Form
pdb|1RIR|A Chain A, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|B Chain B, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|C Chain C, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|D Chain D, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIT|A Chain A, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|B Chain B, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|C Chain C, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|D Chain D, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|2DH1|A Chain A, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|B Chain B, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|C Chain C, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|D Chain D, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DV9|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DVA|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVB|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVD|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVF|A Chain A, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|B Chain B, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|C Chain C, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|D Chain D, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVG|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
Length = 236
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 18/36 (50%)
Query: 101 PSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWSND 136
P+G+ G G G FVGVE DTY S ND
Sbjct: 97 PAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYND 132
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,201,898
Number of Sequences: 62578
Number of extensions: 1180329
Number of successful extensions: 2381
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2323
Number of HSP's gapped (non-prelim): 53
length of query: 713
length of database: 14,973,337
effective HSP length: 106
effective length of query: 607
effective length of database: 8,340,069
effective search space: 5062421883
effective search space used: 5062421883
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)