Query 005122
Match_columns 713
No_of_seqs 532 out of 2474
Neff 6.7
Searched_HMMs 46136
Date Thu Mar 28 18:24:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005122.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005122hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03185 phosphatidylinositol 100.0 1E-150 3E-155 1294.4 60.3 645 50-709 1-765 (765)
2 KOG0229 Phosphatidylinositol-4 100.0 1E-108 3E-113 874.6 32.7 389 298-709 25-420 (420)
3 cd00139 PIPKc Phosphatidylinos 100.0 5.5E-90 1.2E-94 731.7 31.8 303 314-709 1-313 (313)
4 smart00330 PIPKc Phosphatidyli 100.0 2.1E-81 4.6E-86 674.2 32.1 333 340-708 1-342 (342)
5 PF01504 PIP5K: Phosphatidylin 100.0 4.9E-67 1.1E-71 544.3 16.5 247 396-708 1-252 (252)
6 COG5253 MSS4 Phosphatidylinosi 100.0 7.5E-59 1.6E-63 495.5 14.9 307 300-708 281-596 (612)
7 KOG0230 Phosphatidylinositol-4 100.0 1.9E-49 4.2E-54 465.2 16.5 247 368-709 1324-1587(1598)
8 PLN03185 phosphatidylinositol 100.0 9.5E-37 2.1E-41 352.4 24.1 174 46-220 20-193 (765)
9 COG4642 Uncharacterized protei 99.8 1.2E-18 2.5E-23 159.8 11.1 131 80-210 8-138 (139)
10 COG4642 Uncharacterized protei 99.8 3E-18 6.4E-23 157.1 11.4 133 56-188 7-139 (139)
11 KOG0231 Junctional membrane co 99.8 7.1E-19 1.5E-23 196.9 8.9 174 46-219 131-319 (455)
12 KOG0231 Junctional membrane co 99.7 2.3E-17 4.9E-22 184.9 8.1 169 51-221 115-298 (455)
13 COG2849 Uncharacterized protei 98.1 0.00018 3.9E-09 74.5 18.6 130 92-221 85-219 (230)
14 COG2849 Uncharacterized protei 98.0 0.00014 3.1E-09 75.3 15.9 139 69-207 85-229 (230)
15 smart00698 MORN Possible plasm 97.3 0.00035 7.6E-09 47.2 4.1 22 197-218 2-23 (26)
16 smart00698 MORN Possible plasm 97.2 0.00059 1.3E-08 46.1 3.9 22 174-195 2-23 (26)
17 PF02493 MORN: MORN repeat; I 97.2 0.0003 6.6E-09 45.8 2.4 22 198-219 1-22 (23)
18 PF02493 MORN: MORN repeat; I 97.1 0.00039 8.5E-09 45.3 2.7 22 175-196 1-22 (23)
19 PLN02667 inositol polyphosphat 72.7 6.4 0.00014 42.3 5.6 67 419-496 22-99 (286)
20 PF07202 Tcp10_C: T-complex pr 69.4 60 0.0013 32.5 11.2 11 186-196 119-129 (179)
21 PF07202 Tcp10_C: T-complex pr 56.4 1.5E+02 0.0033 29.7 11.3 11 209-219 119-129 (179)
22 PF12226 Astro_capsid_p: Turke 50.0 6.1 0.00013 38.6 0.4 49 372-428 102-153 (230)
23 PF14977 FAM194: FAM194 protei 45.8 1.1E+02 0.0024 31.4 8.6 81 144-232 9-93 (208)
24 PF01636 APH: Phosphotransfera 29.4 2.1E+02 0.0045 28.1 7.8 73 409-484 6-79 (239)
25 PRK10345 hypothetical protein; 27.8 1.9E+02 0.0042 29.4 7.2 67 409-480 11-85 (210)
26 cd00180 PKc Catalytic domain o 27.7 1.8E+02 0.0039 27.3 6.7 108 410-552 3-113 (215)
27 KOG4620 Uncharacterized conser 26.5 54 0.0012 27.8 2.3 37 670-710 7-43 (80)
28 PF12915 DUF3833: Protein of u 25.7 2E+02 0.0044 28.4 6.5 53 178-230 27-92 (164)
29 cd05040 PTKc_Ack_like Catalyti 22.9 4.6E+02 0.01 26.2 9.1 69 409-483 4-78 (257)
30 PF14977 FAM194: FAM194 protei 22.3 2.5E+02 0.0053 28.9 6.6 12 162-173 67-78 (208)
31 PF07661 MORN_2: MORN repeat v 22.1 1.4E+02 0.0029 18.4 3.1 19 185-203 2-21 (22)
32 PF10411 DsbC_N: Disulfide bon 21.3 69 0.0015 25.6 2.0 22 404-427 25-46 (57)
33 cd06608 STKc_myosinIII_like Ca 20.6 6.4E+02 0.014 25.2 9.6 115 409-552 15-134 (275)
34 PLN00034 mitogen-activated pro 20.3 6E+02 0.013 27.3 9.8 68 410-482 84-154 (353)
No 1
>PLN03185 phosphatidylinositol phosphate kinase; Provisional
Probab=100.00 E-value=1.3e-150 Score=1294.37 Aligned_cols=645 Identities=53% Similarity=0.924 Sum_probs=542.0
Q ss_pred EEEEcCCCCEEEEEEECCeEeeeEEEEEcCCcEEEEEEECCEEeeeEEEEeCCCCEEEEEEeCCeeeeeeEEEeecCCee
Q 005122 50 VEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTY 129 (713)
Q Consensus 50 ~~~~~~nG~~Y~G~~~~g~~hG~G~~~~~dG~~YeG~w~~g~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~~G~~Y 129 (713)
+++.++||++|+|+|.++++||.|++.|+||++|+|+|++|++||.|++.|++|.+|+|+|++|++||.|++++++|.+|
T Consensus 1 Ge~~~~nGd~Y~Ge~~~g~~hG~G~~~~~DG~~YeGew~~Gk~hG~G~~~~~nG~~YeGeF~nG~~hG~G~~~~~~G~~Y 80 (765)
T PLN03185 1 GELVLSNGDFYSGSLLGNVPEGPGKYLWSDGCMYEGEWRRGMRHGNGKISWPSGATYEGEFSGGYMHGSGTYTGTDGTTY 80 (765)
T ss_pred CeEEecCCCEEEEEEECCccccceEEEECCCCEEEEEEECCEeeCcEeEEeCCCCEEEEEEECCEEeceEEEEecCCCEE
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCeeeeeeeEEecCCcEEEEEEeCceEeeeEEEEEccCCEEEEEEecCeEeeeEEEEecCCCEEEEEEeCCeeeE
Q 005122 130 RGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKG 209 (713)
Q Consensus 130 ~G~w~~g~~~G~G~~~~~nG~~YeG~w~~g~~~G~G~~~~~nG~~Y~G~w~~g~~~G~G~~~~~nG~~YeG~w~~G~~~G 209 (713)
+|+|++|++||.|++.|+||++|+|+|++|+++|.|+|.|+||.+|+|+|++|++||.|+++|+||.+|+|+|.+|++||
T Consensus 81 eG~w~~gkkhG~G~~~y~nG~vYeG~wk~G~~~G~G~y~~~nG~~Y~Gefk~Gk~~G~G~l~~~nG~~YeG~w~nG~~hG 160 (765)
T PLN03185 81 KGRWRLNLKHGLGYQRYPNGDVFEGSWIQGLQEGPGKYTWANGNVYLGDMKGGKMSGKGTLTWVSGDSYEGQWLDGMMHG 160 (765)
T ss_pred EEEEeCCcccceeEEEEecchhhhhhhhcCceecceeeeccCCCeEEEEecCCEEecCEEEEEeCCCeEEEEEeCCccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCccc-------cCCCccEEecCccccCCC--CCCC------CCc---------------------------
Q 005122 210 KGVFTWSNHENMK-------NDERDNFEVMGARKRSSS--ADPA------RPR--------------------------- 247 (713)
Q Consensus 210 ~G~~~~~dG~~y~-------~~~~G~~~~~~~~~~~~~--~~~~------~~~--------------------------- 247 (713)
.|+++|+||.+|. +++.|+|++.|...+... +... ++.
T Consensus 161 ~G~y~~~DG~~Y~G~W~~G~~~G~G~~y~~G~~~p~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (765)
T PLN03185 161 FGVYTWSDGGCYVGTWTRGLKDGKGVFYPAGSRVPAVQEFYLNALRKRGVLPDLRRQNQVLSSHNSEQLSRGVSSDKLSK 240 (765)
T ss_pred eEEEEECCCCEEEEEeeCCceEeEEEEEECCCcccccchhhhhcccccccccchhhcccccccccccccccccccccccc
Confidence 9999999999992 346899999876422221 0000 000
Q ss_pred --e---------ee-----ecCCCCCCC-cccccc---chhhHhhhhhc-------ccCCCCCCCCCc-c----------
Q 005122 248 --I---------YI-----WELDGEAGD-ITCDIV---DKAEAASMLYK-------NQFGGPPNGIGQ-F---------- 289 (713)
Q Consensus 248 --~---------~~-----~~~~~~~~~-~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~-~---------- 289 (713)
+ .. |.++.+..+ ++.+.+ ..++. .++.. ..++|+++||+. +
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (765)
T PLN03185 241 GSLLPLEQSRNRNVSLERRWSLEVSIEKVIGHDYSGSSSAVLD-EGSEVEYKANRPILEREYMQGVLISELVLNNSFSST 319 (765)
T ss_pred cccccccccccccccccccccccCcccceeccccccccccccc-chhhccccccccccchhhhcceeeeeeecccccchh
Confidence 0 00 111111111 111100 00000 00000 012567777731 1
Q ss_pred cCCCCCc---CCCcccCCceEEeCCCcchHHHHHHHHHHHHhhcCC-ccccccCCcCCCCccceeeeecCCCCCCCCCCc
Q 005122 290 QKSPCSS---ADGEVKKPGHTISKGHKNYDLMLNLQLGIRHSVGKH-ASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPH 365 (713)
Q Consensus 290 ~~~~~~~---~~~~~~~~g~~i~~gh~~~~l~~~~~~Gi~~sv~~~-~~~~~~l~~~df~~~~k~~~~f~~~~s~~~p~~ 365 (713)
.++++.. ..++++++|++|++||+||+||+|||||||+||+++ +.+.++|+++||++++|+++.||++||+.||+|
T Consensus 320 ~~~~~~~~~~~~~~~~~~g~~i~~gh~~~~l~~~~~~GIr~sv~~~~~~~~~~l~~~DF~~~~~~~~~fp~~gs~~tp~h 399 (765)
T PLN03185 320 SRRAKRRQKKLVKEIKRPGETIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRPSDFGPRASFWMNFPKAGSQLTPSH 399 (765)
T ss_pred ccccccccccchhhhcCCCcEEecCcCcHHHHHHHHHhHHHHhccccccCCccCChhhCcceEEEEEEcCcccCccCCCC
Confidence 1222222 236779999999999999999999999999999999 556679999999999999999999999999999
Q ss_pred cccceEEEEcCHHHHHHHHHHcCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCeEEEEecCHHHHHHHHHHhHHh
Q 005122 366 QSMDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSY 445 (713)
Q Consensus 366 ~~~~f~~k~Y~P~vF~~lR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~t~D~rfiiKti~~~E~~~l~~~lp~Y 445 (713)
++.+|+||||||+|||+||++|||+++||+.|||++.+|+|++|+|||||+||+|+|+|||||||+++|+++|++|||+|
T Consensus 400 ~~~~fkfkdY~P~vFr~LR~~fgId~~dyl~Sl~~~~~l~el~S~GKSGS~Fy~S~D~rFiIKTI~k~E~~~l~~iLp~Y 479 (765)
T PLN03185 400 QSEDFKWKDYCPMVFRNLREMFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRKSEVKVLLRMLPDY 479 (765)
T ss_pred ccCceEEEEECHHHHHHHHHHhCCCHHHHHHhccCCccchhccCCCCcCCeEEEecCCcEEEEecCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEceeccCccceEEEEEecCCcccccCCCCccccccccccccccccce
Q 005122 446 YQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFV 525 (713)
Q Consensus 446 ~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~~~ 525 (713)
|+||..||+|||+||||||+|++.+++++|||||+|||+++..||++||||||+++|.+.+. +.++.+||||+||+..
T Consensus 480 ~~hv~~n~~TLL~kf~Gl~~i~~~~g~k~~fvVM~NlF~~~~~I~~~yDLKGSt~~R~~~k~--~~~~~~tlKDlD~~~~ 557 (765)
T PLN03185 480 HHHVKTYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSADKV--EIDENTTLKDLDLNYS 557 (765)
T ss_pred HHHHhhCCCcchhhheEEEEEEeCCCcEEEEEEEecCCCCCCccceEEECCCCCCCCCCccc--cccCCCeeeecCcCce
Confidence 99999999999999999999998888999999999999999999999999999999999663 4567899999999999
Q ss_pred eccChHHHHHHHHHHHHHHHhhhcCCccccceeeEeeecCCCccccccCCC----------C------CC----------
Q 005122 526 FRLDRSWFQELIRQIDRDCEFLEAERIMDYSLLIGLHFRDDYSGDEMKMSP----------N------DK---------- 579 (713)
Q Consensus 526 ~~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~----------~------~~---------- 579 (713)
+.|++++++.|++||++||+||++++|||||||||||+++....+...... . +.
T Consensus 558 ~~l~~~~k~~l~~qL~~D~~FL~~~~IMDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (765)
T PLN03185 558 FYLEPSWRDALLRQIEIDSKFLEAQRIMDYSLLLGVHFRAPQHLRSLLPYSRSITADGLEVVAEEDTIEDEELSYPEGLV 637 (765)
T ss_pred EeeCHHHHHHHHHHHHHHHHHHhHCcCeecceEEEEEecChhhhcccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999998764332211110 0 00
Q ss_pred -------ccCCCCcCCCcccccccc-CCCCCchhhhc-CCCCcccCCCCCccccccccc-cccccccCCCCCCCCCCCCC
Q 005122 580 -------HCLDKRDSDIVGTFMRGY-HLLPDMDWVME-GRGPHLRLGANTPARAQRVSK-IEIDQFMGSGSNHSTPSQSG 649 (713)
Q Consensus 580 -------~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~-~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 649 (713)
+.+.+.+++.+++++++. ....++|++++ ++.+.+++|+||||||+++.+ ++.+... .
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~mpara~~~~~~~~~~~~~------------~ 705 (765)
T PLN03185 638 LVPRGADDGSTVPGPHIRGSRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAERIPGREDKEKQS------------F 705 (765)
T ss_pred cccccccccccCCCcccccccccccccCchhhhhccccccccchhhcccCchhhhcccccccccccc------------c
Confidence 000111223334444432 22567888888 445779999999999999887 3322211 3
Q ss_pred CCceeEEEEEEEeeeeecccchhhHHHHHhhhccCCCCceeeChhhHHHHHHHHHHhhcc
Q 005122 650 GEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFIHRIFR 709 (713)
Q Consensus 650 ~~~~~~vyy~GIIDiLq~Y~~~KklE~~~Ks~~~~~~~iS~v~P~~Y~~RF~~fi~~iF~ 709 (713)
+|.+++|||||||||||+|+++|||||+||++++|+.+||||+|+.|++||++||.++|+
T Consensus 706 ~e~~d~~~~~giidilq~y~~~k~~eh~~k~~~~~~~~is~v~p~~y~~rf~~f~~~~f~ 765 (765)
T PLN03185 706 HEVYDVVLYLGIIDILQEYNMSKKIEHAYKSLQFDSLSISAVDPTFYSKRFLEFIQKVFP 765 (765)
T ss_pred CcccceEEEEEEEEeecccchhHHHHHHHhhhccCCCceeccChHHHHHHHHHHHHhhcC
Confidence 578999999999999999999999999999999999999999999999999999999995
No 2
>KOG0229 consensus Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-108 Score=874.59 Aligned_cols=389 Identities=56% Similarity=0.935 Sum_probs=338.6
Q ss_pred CCcccCCceEEeCCCcchHHHHHHHHHHHHhhcCC-ccccccCCcCCCCccceeeeecCCCCCCCCCCccccceEEEEcC
Q 005122 298 DGEVKKPGHTISKGHKNYDLMLNLQLGIRHSVGKH-ASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYC 376 (713)
Q Consensus 298 ~~~~~~~g~~i~~gh~~~~l~~~~~~Gi~~sv~~~-~~~~~~l~~~df~~~~k~~~~f~~~~s~~~p~~~~~~f~~k~Y~ 376 (713)
++..+.+|++|++||.||+||+||||||||||+++ +.+.++|+..||.+.+++|+.||.+||+.||+|.+.+|+|||||
T Consensus 25 ~~~~~~~g~~v~~~~~~~~l~~~lqlGI~~tVg~ls~v~~r~~~~~df~~~~k~~~~fp~~gs~~tp~h~~~~Fk~KdYc 104 (420)
T KOG0229|consen 25 KKHFVKQGEKVKKGHASYPLMLNLQLGIRHTVGSLSSVPERDLPVMDFPDVEKAYSKFPSEGSKFTPPHHSSDFKFKDYC 104 (420)
T ss_pred ccceeccCceEecccccHHHHHHHHhcchhhhcccccCCcccCchhhCchhhhhheecCCCCCccCCCCCccccchhhcC
Confidence 56778899999999999999999999999999999 67778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCeEEEEecCHHHHHHHHHHhHHhHHHHcccCC-c
Q 005122 377 PMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKN-T 455 (713)
Q Consensus 377 P~vF~~lR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~-t 455 (713)
|+|||+||++||||++|||.|||+++++++++|||||||+||+|+|+|||||||+++|+++|++|||.||+|+.++++ |
T Consensus 105 P~vFR~lRelFgId~~DYl~Slc~~~~l~e~sspGksGS~Fy~S~DdrFiIKTv~~~E~~~l~~mLp~Yy~~v~~~~~~T 184 (420)
T KOG0229|consen 105 PMVFRNLRELFGIDPADYLLSLCGNPPLRELSSPGKSGSFFYLSYDDRFIIKTVRKSEVKVLLKMLPGYYQHVVEQNNRT 184 (420)
T ss_pred hHHHHHHHHHhCCChHHHHHHHhcchhhhhccCCCCccceEEEecCceEEEEeccHHHHHHHHHHHHHHHHHHHccCCce
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999876555 9
Q ss_pred ceeeeeeeEEEEecCCeEEEEEEEceeccCccceEEEEEecCCcccccCCCCcccccccccccccccc---ceeccChHH
Q 005122 456 LVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLD---FVFRLDRSW 532 (713)
Q Consensus 456 LL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~---~~~~l~~~~ 532 (713)
|||||||||||++.+|+++|||||+|||++++.||++|||||||++|.+++ ++++++.+||||+||. ..|.|++++
T Consensus 185 Ll~kf~Gly~vk~~gg~k~yfvVM~Nlf~~~~~iH~kyDLKGSt~~R~ask-ke~~k~~pTlKDlDf~~~~~~~~l~~~~ 263 (420)
T KOG0229|consen 185 LLPKFFGLYRVKPDGGKKIYFVVMNNLFPSRLKVHRKYDLKGSTVGREASK-KEKIKELPTLKDLDFLNEGQKLYLGKEA 263 (420)
T ss_pred eehhhceeEEEeeCCCceEEEEEecccCCCccceeEEeecCCCcccccccc-hhhccCCCccccchhhccCceEecCHHH
Confidence 999999999999999999999999999999999999999999999999988 5567899999999997 789999999
Q ss_pred HHHHHHHHHHHHHhhhcCCccccceeeEeeecCCCccccccCCCCCCccCCCCcCCCccccccccCCCCCchhhhcCCCC
Q 005122 533 FQELIRQIDRDCEFLEAERIMDYSLLIGLHFRDDYSGDEMKMSPNDKHCLDKRDSDIVGTFMRGYHLLPDMDWVMEGRGP 612 (713)
Q Consensus 533 ~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (713)
+++|++||++||+||++++|||||||||||++++...+.....+.. +.+....+.+.... . +...+++.+
T Consensus 264 ~~~l~~ql~~Dce~Le~~~IMDYSLLvGiH~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~--~-~~~~~~~~~ 333 (420)
T KOG0229|consen 264 KKALLKQLKRDCEFLESLKIMDYSLLVGIHDRDRGQAEKEELEPQE-------DESEREQRLSSASP--E-DVLTSTASP 333 (420)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhhheeeeeeccccccchhhcCCCC-------Cccccccccccccc--c-ccCCCCCcc
Confidence 9999999999999999999999999999999988544433332210 01111111111111 1 222235677
Q ss_pred cccCCCCCcccccc--ccccccccccCCCCCCCCCCCCCCCceeEEEEEEEeeeeecccchhhHHHHHhhhccCCCCcee
Q 005122 613 HLRLGANTPARAQR--VSKIEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSISA 690 (713)
Q Consensus 613 ~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyy~GIIDiLq~Y~~~KklE~~~Ks~~~~~~~iS~ 690 (713)
.+++|.++|+++.. ..+. .+.+ +....++++|||||||||||+|+++||+||+||+++|++.+|||
T Consensus 334 ~i~~g~~~p~~~~~~~~~~~------~~~~------~~~~~~~~~v~y~GIIDILq~Y~~~KK~EH~~Ksl~~d~~tIS~ 401 (420)
T KOG0229|consen 334 SIQLGANMPARAGEERVDRM------EYAP------AQNSGGYDVVLYIGIIDILQDYDIKKKLEHAYKSLQHDPDTISA 401 (420)
T ss_pred cccCCCCCCCcccccccccc------cccc------ccccCcceEEEEEEeehhhhhcchhhHHHHHHhhhccCCceeec
Confidence 89999999998732 2210 0111 11223789999999999999999999999999999999999999
Q ss_pred eChhhHHHHHHHHHHhhcc
Q 005122 691 VDPKLYSKRFRDFIHRIFR 709 (713)
Q Consensus 691 v~P~~Y~~RF~~fi~~iF~ 709 (713)
|+|++||+||++||.++|.
T Consensus 402 v~P~~Ys~RF~dFi~~~~~ 420 (420)
T KOG0229|consen 402 VDPKFYAKRFLDFISNIFF 420 (420)
T ss_pred cCHHHHHHHHHHHHHhhcC
Confidence 9999999999999999874
No 3
>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II phosphatidylinositol phosphate kinases (PIPKII-beta), type I andII PIPK (-alpha, -beta, and -gamma) kinases and related yeast Fab1p and Mss4p kinases. Signaling by phosphorylated species of phosphatidylinositol regulates secretion, vesicular trafficking, membrane translocation, cell adhesion, chemotaxis, DNA synthesis, and cell cycling. The catalytic core domains of PIPKs are structurally similar to PI3K, PI4K, and cAMP-dependent protein kinases (PKA), the dimerization region is a unique feature of the PIPKs.
Probab=100.00 E-value=5.5e-90 Score=731.73 Aligned_cols=303 Identities=54% Similarity=0.861 Sum_probs=283.5
Q ss_pred chHHHHHHHHHHHHhhcCC-ccc-cccCCcCCCCccceeeeecCCCCCCCCCCccccceEEEEcCHHHHHHHHHHcCCCh
Q 005122 314 NYDLMLNLQLGIRHSVGKH-ASV-MRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDP 391 (713)
Q Consensus 314 ~~~l~~~~~~Gi~~sv~~~-~~~-~~~l~~~df~~~~k~~~~f~~~~s~~~p~~~~~~f~~k~Y~P~vF~~lR~~~~i~~ 391 (713)
||+||++||||||+||+++ +.+ +++|+++||++++++. ||++|+..||+|...+|+|++|||.||++||++|||++
T Consensus 1 ~~~l~~~~~~Gi~~~v~~~~~~~~~~~l~~~Df~~~~~~~--~~~~~~~~~~~~~~~~f~fk~Y~P~vF~~lR~~~gi~~ 78 (313)
T cd00139 1 SYPLMSNLQLGIRHSVGELSSVPSPRDLLPDDFKAKSKIK--FPNHGSHLTPPHLSADFKFKDYCPEVFRALRELFGIDE 78 (313)
T ss_pred ChHHHHHHHHHHHHHhhhcccCCccccCchhhhhheEEEE--cCCCCCcccCCCCCccEEEEEeCHHHHHHHHHHcCCCH
Confidence 6899999999999999999 333 3789999999988887 99999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCcccccccCCCCccceEEEeeCCeEEEEecCHHHHHHHHHHhHHhHHHHcccC-CcceeeeeeeEEEEec-
Q 005122 392 ADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYK-NTLVTKFFGVHCVKPV- 469 (713)
Q Consensus 392 ~~y~~Sl~~~~~l~~~~s~GKSGs~F~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~-~tLL~k~~Gl~~i~~~- 469 (713)
+||+.|||++. +.+++|+|||||+||+|+|+|||||||+++|+++|+++||+||+||.+|| +|||+||||||+|++.
T Consensus 79 ~dy~~Sl~~~~-~~e~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~Lp~Y~~~~~~n~~~TLL~k~~Gl~~i~~~~ 157 (313)
T cd00139 79 ADYLRSLCRSP-LWELSSGGKSGSFFYKTLDDRFIIKTVSHSEIESLLKFLPNYYEYITQNPQNTLLPKFFGLYRVKVKS 157 (313)
T ss_pred HHHHHHhcCCC-CccCCCCCCCCCEEEEecCCcEEEEecCHHHHHHHHHHHHHHHHHHHhCCCCcchhhheEEEEEEEcC
Confidence 99999999764 78899999999999999999999999999999999999999999999999 9999999999999987
Q ss_pred -CCeEEEEEEEceeccCccceEEEEEecCCcccccCCCCccccccccccccccccc----eeccChHHHHHHHHHHHHHH
Q 005122 470 -GGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDF----VFRLDRSWFQELIRQIDRDC 544 (713)
Q Consensus 470 -~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~~----~~~l~~~~~~~l~~ql~~D~ 544 (713)
.++++|||||+|||+++..||++||||||+++|.+.+++ ..+..+||||+||.. .+.|++++++.|++||++||
T Consensus 158 ~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~vlKD~df~~~~~~~i~l~~~~k~~l~~qL~~D~ 236 (313)
T cd00139 158 GTGKKVDFLVMENLFYSRLKIHRKYDLKGSTRNREASKKE-KQKENPVLKDLNLLEMIEQPLFVGEHSKKALLTQIKRDC 236 (313)
T ss_pred CCCceEEEEEEecCCCCCccceEEEECCCCCCCCCcCccc-ccCCccccchhhhHhhcCceEEeCHHHHHHHHHHHHHHH
Confidence 468999999999999989999999999999999998753 346789999999965 78999999999999999999
Q ss_pred HhhhcCCccccceeeEeeecCCCccccccCCCCCCccCCCCcCCCccccccccCCCCCchhhhcCCCCcccCCCCCcccc
Q 005122 545 EFLEAERIMDYSLLIGLHFRDDYSGDEMKMSPNDKHCLDKRDSDIVGTFMRGYHLLPDMDWVMEGRGPHLRLGANTPARA 624 (713)
Q Consensus 545 ~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~ 624 (713)
+||+++||||||||||||..
T Consensus 237 ~FL~~~~iMDYSLLvGi~~~------------------------------------------------------------ 256 (313)
T cd00139 237 EFLESLNIMDYSLLVGIHDI------------------------------------------------------------ 256 (313)
T ss_pred HHHHHCCCcccceEEEEecC------------------------------------------------------------
Confidence 99999999999999999832
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEEEEeeeeecccchhhHHHHHhhhccCC-CCceeeChhhHHHHHHHH
Q 005122 625 QRVSKIEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDP-SSISAVDPKLYSKRFRDF 703 (713)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyy~GIIDiLq~Y~~~KklE~~~Ks~~~~~-~~iS~v~P~~Y~~RF~~f 703 (713)
+.|||||||||||+||++||+||++|++.+++ .+||||||++|++||++|
T Consensus 257 -----------------------------~~i~~~GIID~L~~y~~~Kk~E~~~K~~~~~~~~~iS~v~P~~Y~~RF~~f 307 (313)
T cd00139 257 -----------------------------RLVLYLGIIDILRTYTWDKKLEHWVKSLGHDGGKTPSVVSPEQYAKRFREF 307 (313)
T ss_pred -----------------------------CceEEEEEEeeeeeCCHHHHHHHHHHHhccCCCCCcceECHHHHHHHHHHH
Confidence 13799999999999999999999999999988 899999999999999999
Q ss_pred HHhhcc
Q 005122 704 IHRIFR 709 (713)
Q Consensus 704 i~~iF~ 709 (713)
|.++|.
T Consensus 308 i~~~f~ 313 (313)
T cd00139 308 MDKYFL 313 (313)
T ss_pred HHHhcC
Confidence 999984
No 4
>smart00330 PIPKc Phosphatidylinositol phosphate kinases.
Probab=100.00 E-value=2.1e-81 Score=674.16 Aligned_cols=333 Identities=49% Similarity=0.774 Sum_probs=268.0
Q ss_pred CcCCCCccceeeeecCCCCCCCCCCccccceEEEEcCHHHHHHHHHHcCCChHHHHHhhcCCcccccccCCCCccceEEE
Q 005122 340 RQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYL 419 (713)
Q Consensus 340 ~~~df~~~~k~~~~f~~~~s~~~p~~~~~~f~~k~Y~P~vF~~lR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~ 419 (713)
+++||++.+|+++.++.. ++.+|+|++.+|+|++|||.+|+.||++|||++++|+.|||.+.. +++.|+|||||+||+
T Consensus 1 ~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Y~P~~F~~lR~~~~i~~~~y~~Sl~~~~~-~~~~s~GKSGs~F~~ 78 (342)
T smart00330 1 LPSDFKATEKIKFPTPGH-LELTPSHGSADFKFKDYCPEVFRNLRELFGIDPADYLRSLCRSPP-LELSSGGKSGSFFYL 78 (342)
T ss_pred CccccccceeEeecCCCc-ccccCCCCCccEEEEEeCHHHHHHHHHHcCCCHHHHHHHhCCCCc-cccCCCCCCCCEEEE
Confidence 478999999999877776 799999999999999999999999999999999999999997553 688999999999999
Q ss_pred eeCCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCC--eEEEEEEEceeccCccceEEEEEecC
Q 005122 420 TQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGG--QKTRFIVMGNLFCSEYRIHRRFDLKG 497 (713)
Q Consensus 420 t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~--~~~~fvVM~Nlf~~~~~i~~~yDLKG 497 (713)
|.|+|||||||+++|+++|+++||+||+||..||+|||+||||||+|++.++ .++|||||+|||++...||++|||||
T Consensus 79 T~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~n~~SlL~ki~Gly~i~~~~~~~~~~~fiVM~NlF~~~~~i~~~yDLKG 158 (342)
T smart00330 79 SLDDRFIIKTVSKSEIKSLLPMLPNYYEHIVQNPNTLLPKFFGLYRVKVKGGTEKKIYFLVMENLFYSDLKVHRKYDLKG 158 (342)
T ss_pred ecCCcEEEEecCHHHHHHHHHHHHHHHHHHHhCCCcchhhhcEEEEEEECCCcceeEEEEEEecCCCCCCceeEEEECCC
Confidence 9999999999999999999999999999999999999999999999998876 69999999999998899999999999
Q ss_pred CcccccCCCCcccccccccccccccc----ceeccChHHHHHHHHHHHHHHHhhhcCCccccceeeEeeecCCCcccccc
Q 005122 498 SSYGRITDKPEEEIDETTTLKDLDLD----FVFRLDRSWFQELIRQIDRDCEFLEAERIMDYSLLIGLHFRDDYSGDEMK 573 (713)
Q Consensus 498 S~~~R~~~~~~~~~~~~~~lkDld~~----~~~~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~ 573 (713)
|+++|.+.+ +..+..+||||+||. ..+.|++..++.|++||++||+||+++||||||||||||..+....+...
T Consensus 159 S~~~R~~~~--~~~~~~~vlkD~df~~~~~~~i~l~~~~k~~l~~ql~~D~~FL~~~~imDYSLLvGi~~~~~~~~~~~~ 236 (342)
T smart00330 159 STRGREADK--KKVKELPVLKDLDLVEMWNQPIYVDPLAKKALLKQIKRDCEFLESLKIMDYSLLVGIHDIERGQREEIE 236 (342)
T ss_pred CCCCCCcCc--cccCCCCcccccchhhccCCeEEECHHHHHHHHHHHHHHHHHHHHccchhhhhhhccccccccchhccc
Confidence 999999976 334578999999997 56899999999999999999999999999999999999987764332211
Q ss_pred CCCCC-CccCC-CCcCCCccccccccCCCCCchhhhcC-CCCcccCCCCCccccccccccccccccCCCCCCCCCCCCCC
Q 005122 574 MSPND-KHCLD-KRDSDIVGTFMRGYHLLPDMDWVMEG-RGPHLRLGANTPARAQRVSKIEIDQFMGSGSNHSTPSQSGG 650 (713)
Q Consensus 574 ~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (713)
..... ..... ..+. ..+..+.. +.+.+... ......+|. +|++ ..
T Consensus 237 ~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~-------------------------~~ 284 (342)
T smart00330 237 LPPVYGSDESPSSESS--NGGKAPDI----TGNLLVSNSPDGDGPFGG-IPAR-------------------------AI 284 (342)
T ss_pred cccccccccccccccc--ccCCCccc----cccccccccccccccccc-cccc-------------------------cc
Confidence 11100 00000 0000 00000000 00000000 000000000 1100 01
Q ss_pred CceeEEEEEEEeeeeecccchhhHHHHHhhhccCCCCceeeChhhHHHHHHHHHHhhc
Q 005122 651 EVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFIHRIF 708 (713)
Q Consensus 651 ~~~~~vyy~GIIDiLq~Y~~~KklE~~~Ks~~~~~~~iS~v~P~~Y~~RF~~fi~~iF 708 (713)
...++|||||||||||+||++||+||++|++.+++.+||||||+.|++||++||.+||
T Consensus 285 ~~~~~vy~iGIID~Lq~Y~~~KklE~~~K~~~~~~~~iS~V~P~~Y~~RF~~fi~~~F 342 (342)
T smart00330 285 RARRVVLYLGIIDILQTYTWDKKLEHWVKSIGHDGKTISVVHPEQYAKRFRDFMDKYF 342 (342)
T ss_pred cCCceEEEEEEEEEEEeCCHhHHHHHHHHHhccCCCCcceECHHHHHHHHHHHHHhhC
Confidence 1235799999999999999999999999999999999999999999999999999998
No 5
>PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in []. This region is found in I, II and III phosphatidylinositol-4-phosphate 5-kinases (PIP5K enzymes). PIP5K catalyses the formation of phosphoinositol-4,5-bisphosphate via the phosphorylation of phosphatidylinositol-4-phosphate a precursor in the phosphinositide signalling pathway.; GO: 0016307 phosphatidylinositol phosphate kinase activity, 0046488 phosphatidylinositol metabolic process; PDB: 1BO1_A 2GK9_C 2YBX_B.
Probab=100.00 E-value=4.9e-67 Score=544.26 Aligned_cols=247 Identities=45% Similarity=0.752 Sum_probs=161.0
Q ss_pred HhhcCCcccccccCCCCccceEEEeeCCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCC-eEE
Q 005122 396 LAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGG-QKT 474 (713)
Q Consensus 396 ~Sl~~~~~l~~~~s~GKSGs~F~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~-~~~ 474 (713)
+|||+..++++..|+|||||+||+|.|+|||||||+++|+++|+++||+||+||.+||+|||+||||||+|+..++ +++
T Consensus 1 ~sl~~~~~~~~~~s~GKSGs~F~~T~D~kfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~SlL~r~~Gl~~i~~~~~~~~~ 80 (252)
T PF01504_consen 1 MSLCNLSSLSEKSSGGKSGSFFFFTSDGKFIIKTISKSEFKFLLKILPAYFEHMSENPNSLLPRFYGLYSIKKSNGKEKI 80 (252)
T ss_dssp ----------ES---SSSSS-EEE-TTSSEEEEEE-HHHHHHHHHHHHHHHHHHHHTTTSSS--EEEEEEE-EETT-EEE
T ss_pred CCccccccccccCCCCCccCEEEEeCCCCEEEEeCCHHHHHHHHHHHHHHHHHHHhCcCchHHHHHHHheecccCCceeE
Confidence 4899888999999999999999999999999999999999999999999999999999999999999999976666 999
Q ss_pred EEEEEceeccCccceEEEEEecCCcccccCCCCcccccccccccccccc---ceeccChHHHHHHHHHHHHHHHhhhcCC
Q 005122 475 RFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLD---FVFRLDRSWFQELIRQIDRDCEFLEAER 551 (713)
Q Consensus 475 ~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~---~~~~l~~~~~~~l~~ql~~D~~FL~~~~ 551 (713)
|||||+|||++...|+++||||||+++|.+.+ ++..+..+|+||+||. ..+.|++..++.|++||++||+||+++|
T Consensus 81 ~fvVM~N~f~~~~~i~~~yDLKGs~~~R~~~~-~~~~~~~~~lkD~df~~~~~~i~l~~~~~~~l~~ql~~D~~FL~~~~ 159 (252)
T PF01504_consen 81 YFVVMENLFYTPRNIHERYDLKGSTVGRKAKK-KDREQTEPVLKDLDFIESKRKIHLGPEQKEELLKQLERDTEFLSSHN 159 (252)
T ss_dssp EEEEEE-SS-SSS--SEEEEE--SSSSS-S-C-HHHCSSS-EEEHHHHHHTT--SBS-SCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCccCCcccceEEecCCcccCCCCCc-cccccccceeecccccccCcEEEeChHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999899999999999999999986 3334468899999997 7799999999999999999999999999
Q ss_pred ccccceeeEeeecCCCccccccCCCCCCccCCCCcCCCccccccccCCCCCchhhhcCCCCcccCCCCCccccccccccc
Q 005122 552 IMDYSLLIGLHFRDDYSGDEMKMSPNDKHCLDKRDSDIVGTFMRGYHLLPDMDWVMEGRGPHLRLGANTPARAQRVSKIE 631 (713)
Q Consensus 552 imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~ 631 (713)
|||||||||||............ .
T Consensus 160 imDYSLLvGi~~~~~~~~~~~~~--------------------------------------------------------~ 183 (252)
T PF01504_consen 160 IMDYSLLVGIHNRDSNEEQENKS--------------------------------------------------------S 183 (252)
T ss_dssp EES-EEEEEEEH---HHHHHH-H---------------------------------------------------------
T ss_pred ccccceeEeeeeccccccccccc--------------------------------------------------------c
Confidence 99999999999443211000000 0
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEEEEeeeeecccchhhHHHHHhhh-ccCCCCceeeChhhHHHHHHHHHHhhc
Q 005122 632 IDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSL-QVDPSSISAVDPKLYSKRFRDFIHRIF 708 (713)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~vyy~GIIDiLq~Y~~~KklE~~~Ks~-~~~~~~iS~v~P~~Y~~RF~~fi~~iF 708 (713)
.+ ...++. .+...+.+||+|||||||+||++|++||++|++ .+++.+||||||+.||+||++||+++|
T Consensus 184 ~~-~~~~~~--------~s~~~~~vy~~GIID~L~~y~~~K~~E~~~K~~~~~~~~~iS~v~P~~Y~~RF~~~i~~~f 252 (252)
T PF01504_consen 184 FP-SYAGGI--------MSEDGNEVYYLGIIDILQEYNWKKKLEHFFKSLIKCDGQDISCVPPEEYAERFIKFIESIF 252 (252)
T ss_dssp ---TTTTTT--------CCCETTEEEEEEEE-S-EETT------------------SSS---HHHHHHHHHHHHHHH-
T ss_pred cc-ccccce--------eecCCCeEEEEEEehheeeccHHHHHHHHHHHHhhcCCCCCcccCHHHHHHHHHHHHHHhC
Confidence 00 000000 112246799999999999999999999999998 677899999999999999999999987
No 6
>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-59 Score=495.52 Aligned_cols=307 Identities=32% Similarity=0.437 Sum_probs=242.8
Q ss_pred cccCCceEEeCCCcchHHHHHHHHHHHHhhcCCccccccCCcCCCCccceeeeecCCCCCCCCCCccccceEEEEcCHHH
Q 005122 300 EVKKPGHTISKGHKNYDLMLNLQLGIRHSVGKHASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMV 379 (713)
Q Consensus 300 ~~~~~g~~i~~gh~~~~l~~~~~~Gi~~sv~~~~~~~~~l~~~df~~~~k~~~~f~~~~s~~~p~~~~~~f~~k~Y~P~v 379 (713)
+..-.|-.|-.||+|+....||..|||.++.++... |++..|-.-++ .+|. ...+|+||+|||.+
T Consensus 281 e~~l~~~~le~gh~n~~~synmltgirvtlsr~e~i--M~~~tdth~~e------------~~~e-g~~~~s~K~y~~e~ 345 (612)
T COG5253 281 ERLLNGMPLEGGHRNPQESYNMLTGIRVTLSRIEEI--MIKKTDTHLNE------------QFEE-GLYEFSCKDYFPEV 345 (612)
T ss_pred hhhccccccccccccchhhhhhhhhhHHHHHHHHHH--hcCCcCccchh------------hccc-cceeeeHHhhCHHH
Confidence 344456678999999999999999999999998433 23333433222 2222 33689999999999
Q ss_pred HHHHHHHcCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceee
Q 005122 380 FRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTK 459 (713)
Q Consensus 380 F~~lR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k 459 (713)
||.||++||++++ +. ++.....|.|+. +||||||||+|.|.|||||||+++|+..|+.++-.||.|+..||+|||||
T Consensus 346 Fr~lR~l~g~~~a-lv-sl~sryil~E~~-~GKSGSff~~trD~kfIiKti~hsE~~~~r~~~~eY~~~V~~np~T~l~k 422 (612)
T COG5253 346 FRELRALCGCDEA-LV-SLLSRYILWESN-GGKSGSFFLFTRDYKFIIKTISHSEHICFRPMIFEYYVHVLFNPLTLLCK 422 (612)
T ss_pred HHHHHHHhCCcHH-HH-HHHhhhheeccC-CCcccceEEEeccchhhhhhhhhhhHHHHHHHHHHHHHHHHcCchHHHHH
Confidence 9999999999998 54 444455677755 99999999999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEecCC------eEEEEEEEceeccCccceEEEEEecCCcccccCCCCcccccccccccccccc---ceeccCh
Q 005122 460 FFGVHCVKPVGG------QKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLD---FVFRLDR 530 (713)
Q Consensus 460 ~~Gl~~i~~~~~------~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~---~~~~l~~ 530 (713)
|||+|+|++..+ .|+|||||+|||+++. ||++||||||+.+|.+...........++||++|- .++..+
T Consensus 423 i~G~yrv~~~~s~~~~k~~K~~fiVMeNlf~~~~-i~~ifDLKGS~~Nr~ve~~gk~~s~l~~mndv~wI~es~~~~~g- 500 (612)
T COG5253 423 IFGFYRVKSRSSISSSKSRKIYFIVMENLFYPHG-IHRIFDLKGSMRNRHVERTGKSMSVLLDMNDVEWIRESPKIVFG- 500 (612)
T ss_pred HhceeEEeccccccccccceeEEEEecccCCCCC-cceEEeccCchhhhhhhhhccccchhccchhHHHHHhCchhhhh-
Confidence 999999998765 8999999999999875 99999999999999886543222234455666762 224444
Q ss_pred HHHHHHHHHHHHHHHhhhcCCccccceeeEeeecCCCccccccCCCCCCccCCCCcCCCccccccccCCCCCchhhhcCC
Q 005122 531 SWFQELIRQIDRDCEFLEAERIMDYSLLIGLHFRDDYSGDEMKMSPNDKHCLDKRDSDIVGTFMRGYHLLPDMDWVMEGR 610 (713)
Q Consensus 531 ~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (713)
..++.|+.||++|+.||+++||||||||||||+..... ++-.+.
T Consensus 501 ~~Kk~~~sqv~~Dv~fLsklniMDYSllVgi~~~~~~~---------------------------------~V~~I~--- 544 (612)
T COG5253 501 LKKKLLLSQVWNDVLFLSKLNIMDYSLLVGIDDEREEA---------------------------------SVGLII--- 544 (612)
T ss_pred HHHHHHHHHHHHHHHHHHHhCccceeEEEEeccchhhc---------------------------------chHHHH---
Confidence 67888999999999999999999999999999653210 000000
Q ss_pred CCcccCCCCCccccccccccccccccCCCCCCCCCCCCCCCceeEEEEEEEeeeeecccchhhHHHHHhhhccCCCCcee
Q 005122 611 GPHLRLGANTPARAQRVSKIEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSISA 690 (713)
Q Consensus 611 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyy~GIIDiLq~Y~~~KklE~~~Ks~~~~~~~iS~ 690 (713)
|+. .+-...+.+|++||||+|+.|+..| ...+|+
T Consensus 545 --------------------d~i--------------~t~~t~Dk~~~~gI~d~lt~~s~~k------------~~~~t~ 578 (612)
T COG5253 545 --------------------DFI--------------RTRMTGDKKLESGIKDKLTVGSFTK------------RKEPTA 578 (612)
T ss_pred --------------------hhh--------------ccccccceeeeeehhhhhccceeee------------ccccee
Confidence 000 0112346789999999999999998 456899
Q ss_pred eChhhHHHHHHHHHHhhc
Q 005122 691 VDPKLYSKRFRDFIHRIF 708 (713)
Q Consensus 691 v~P~~Y~~RF~~fi~~iF 708 (713)
|+|.+|++||++||+.+.
T Consensus 579 v~p~~y~nrf~~~~e~yi 596 (612)
T COG5253 579 VTPRQYKNRFRKAMEAYI 596 (612)
T ss_pred cCHHHHHHHHHHhHHHhh
Confidence 999999999999999854
No 7
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-49 Score=465.19 Aligned_cols=247 Identities=32% Similarity=0.484 Sum_probs=219.0
Q ss_pred cceEEEEcCHHHHHHHHHHcCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCeEEEEecCHHHHHHHHHHhHHhHH
Q 005122 368 MDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQ 447 (713)
Q Consensus 368 ~~f~~k~Y~P~vF~~lR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~ 447 (713)
..|.+|.|.+..|+.||+.++-++.+|+.||+.+..|. +++|||||+|+.|.|+|||||.|++.|++.|++++|+||+
T Consensus 1324 ~k~svk~~yAe~F~~LR~~c~~sEe~fIrSLsRc~~W~--aqGGKSgs~F~KTlDDRFIiKq~sk~EleSFikFAP~YFk 1401 (1598)
T KOG0230|consen 1324 AKYSVKCYYAEQFRALRKICCPSEEDFIRSLSRCVKWE--AQGGKSGSFFAKTLDDRFIIKQMSKTELESFIKFAPAYFK 1401 (1598)
T ss_pred eEEEEEEEehhhHHHHHHhhCchHHHHHHHHhcCcccc--cCCCcccceeeccccchhhhhhccHHHHHHHHhhhHHHHH
Confidence 56889999999999999999999999999999887766 8999999999999999999999999999999999999999
Q ss_pred HHcc----cCCcceeeeeeeEEEEec---CC--eEEEEEEEceeccCccceEEEEEecCCcccccCCCCccccccccccc
Q 005122 448 HVCQ----YKNTLVTKFFGVHCVKPV---GG--QKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLK 518 (713)
Q Consensus 448 ~~~~----~~~tLL~k~~Gl~~i~~~---~~--~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lk 518 (713)
||.+ --.|.|+|+||+|+|.+. +| -|+.++||+|||+.. .+.+.||||||.++|.+.... ....||-
T Consensus 1402 Yl~~s~~~~~PT~LAKIlGiyqV~vK~~~sgke~K~DvmVMENLfY~r-~vsRifDLKGS~RnR~v~~t~---~~d~VLL 1477 (1598)
T KOG0230|consen 1402 YLTESISQKSPTCLAKILGIYQVSVKSPKSGKETKMDVMVMENLFYGR-KVSRIFDLKGSLRNRYVPTTS---GADEVLL 1477 (1598)
T ss_pred HHHHHHhcCCcchhhhhheeEEEEEecCCCCceeEeeeeeehhhhhcc-ccceeeeccchhhhccCCCCC---CCceEEe
Confidence 9963 345999999999999764 34 578899999999975 899999999999999997643 4567898
Q ss_pred cccc-----cceeccChHHHHHHHHHHHHHHHhhhcCCccccceeeEeeecCCCccccccCCCCCCccCCCCcCCCcccc
Q 005122 519 DLDL-----DFVFRLDRSWFQELIRQIDRDCEFLEAERIMDYSLLIGLHFRDDYSGDEMKMSPNDKHCLDKRDSDIVGTF 593 (713)
Q Consensus 519 Dld~-----~~~~~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (713)
|-|| ..+|.+....+..|-++|.+||.||++++||||||||||.+.
T Consensus 1478 DeNlVe~~~~sPIfV~~~sK~lL~~aiwNDT~FLas~~VMDYSLLVGvD~e----------------------------- 1528 (1598)
T KOG0230|consen 1478 DENLVEMMWTSPIYVGSHSKRLLRRAIWNDTSFLASINVMDYSLLVGVDDE----------------------------- 1528 (1598)
T ss_pred cHHHHhhhhcCCeeehHhHHHHHHHHHhcchHHhhhcccceeeeEEEeeCC-----------------------------
Confidence 8887 345788889999999999999999999999999999999411
Q ss_pred ccccCCCCCchhhhcCCCCcccCCCCCccccccccccccccccCCCCCCCCCCCCCCCceeEEEEEEEeeeeecccchhh
Q 005122 594 MRGYHLLPDMDWVMEGRGPHLRLGANTPARAQRVSKIEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKK 673 (713)
Q Consensus 594 ~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyy~GIIDiLq~Y~~~Kk 673 (713)
...|++||||++++|||.||
T Consensus 1529 ------------------------------------------------------------~~ELvlGIIDfiRtYTWDKk 1548 (1598)
T KOG0230|consen 1529 ------------------------------------------------------------NNELVLGIIDFIRTYTWDKK 1548 (1598)
T ss_pred ------------------------------------------------------------CCeEEEEehHhhhhhhhhhh
Confidence 01389999999999999999
Q ss_pred HHHHHhhhc-cC--CCCceeeChhhHHHHHHHHHHhhcc
Q 005122 674 LEHAYKSLQ-VD--PSSISAVDPKLYSKRFRDFIHRIFR 709 (713)
Q Consensus 674 lE~~~Ks~~-~~--~~~iS~v~P~~Y~~RF~~fi~~iF~ 709 (713)
||.|.|.-. .. +...++|.|++|.+||+++|..||.
T Consensus 1549 LESWVK~sGl~gpk~~~PTVVSP~qYK~RFRkAMd~YfL 1587 (1598)
T KOG0230|consen 1549 LESWVKSSGLGGPKNKQPTVVSPEQYKTRFRKAMDTYFL 1587 (1598)
T ss_pred hhhheeccccccCCCCCCceeCHHHHHHHHHHHHhheee
Confidence 999999752 22 2579999999999999999999985
No 8
>PLN03185 phosphatidylinositol phosphate kinase; Provisional
Probab=100.00 E-value=9.5e-37 Score=352.36 Aligned_cols=174 Identities=33% Similarity=0.699 Sum_probs=169.2
Q ss_pred CceEEEEEcCCCCEEEEEEECCeEeeeEEEEEcCCcEEEEEEECCEEeeeEEEEeCCCCEEEEEEeCCeeeeeeEEEeec
Q 005122 46 GGVVVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVE 125 (713)
Q Consensus 46 ~~~~~~~~~~nG~~Y~G~~~~g~~hG~G~~~~~dG~~YeG~w~~g~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~~ 125 (713)
..+.+...|+||.+|+|+|.++++||.|++.|++|.+|+|+|.+|++||.|++++++|.+|+|+|++|++||.|+++++|
T Consensus 20 ~hG~G~~~~~DG~~YeGew~~Gk~hG~G~~~~~nG~~YeGeF~nG~~hG~G~~~~~~G~~YeG~w~~gkkhG~G~~~y~n 99 (765)
T PLN03185 20 PEGPGKYLWSDGCMYEGEWRRGMRHGNGKISWPSGATYEGEFSGGYMHGSGTYTGTDGTTYKGRWRLNLKHGLGYQRYPN 99 (765)
T ss_pred cccceEEEECCCCEEEEEEECCEeeCcEeEEeCCCCEEEEEEECCEEeceEEEEecCCCEEEEEEeCCcccceeEEEEec
Confidence 35778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeecccccCCeeeeeeeEEecCCcEEEEEEeCceEeeeEEEEEccCCEEEEEEecCeEeeeEEEEecCCCEEEEEEeCC
Q 005122 126 GDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNG 205 (713)
Q Consensus 126 G~~Y~G~w~~g~~~G~G~~~~~nG~~YeG~w~~g~~~G~G~~~~~nG~~Y~G~w~~g~~~G~G~~~~~nG~~YeG~w~~G 205 (713)
|++|+|+|++|++||.|++.++||.+|+|+|++|++||.|+++|+||+.|+|+|.+|++||.|+++|+||.+|+|.|++|
T Consensus 100 G~vYeG~wk~G~~~G~G~y~~~nG~~Y~Gefk~Gk~~G~G~l~~~nG~~YeG~w~nG~~hG~G~y~~~DG~~Y~G~W~~G 179 (765)
T PLN03185 100 GDVFEGSWIQGLQEGPGKYTWANGNVYLGDMKGGKMSGKGTLTWVSGDSYEGQWLDGMMHGFGVYTWSDGGCYVGTWTRG 179 (765)
T ss_pred chhhhhhhhcCceecceeeeccCCCeEEEEecCCEEecCEEEEEeCCCeEEEEEeCCcceeeEEEEECCCCEEEEEeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEecCCCc
Q 005122 206 LPKGKGVFTWSNHEN 220 (713)
Q Consensus 206 ~~~G~G~~~~~dG~~ 220 (713)
++||.|+|+ ++|+.
T Consensus 180 ~~~G~G~~y-~~G~~ 193 (765)
T PLN03185 180 LKDGKGVFY-PAGSR 193 (765)
T ss_pred ceEeEEEEE-ECCCc
Confidence 999999995 67763
No 9
>COG4642 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.78 E-value=1.2e-18 Score=159.78 Aligned_cols=131 Identities=28% Similarity=0.531 Sum_probs=94.0
Q ss_pred CcEEEEEEECCEEeeeEEEEeCCCCEEEEEEeCCeeeeeeEEEeecCCeecccccCCeeeeeeeEEecCCcEEEEEEeCc
Q 005122 80 RCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFN 159 (713)
Q Consensus 80 G~~YeG~w~~g~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~~G~~Y~G~w~~g~~~G~G~~~~~nG~~YeG~w~~g 159 (713)
+..|++.|..++..|.+++..+.++++-|..+.++..|.|++.+.+|..|+|.++|++.+|.|++.++||++|+|.|.++
T Consensus 8 g~~y~~~~~~g~~~g~s~~~~~~car~~g~~kqg~~~Gkgs~~~~~G~~Y~Gtl~ngk~nGqG~~~~~ngd~Y~g~F~s~ 87 (139)
T COG4642 8 GLRYEGFFVRGKLEGLSTYDILGCARVGGSLKQGKLAGKGSLKYDNGRIYTGTLKNGKMNGQGTYTFANGDIYEGPFNSG 87 (139)
T ss_pred heeeeeEEecccccccceEEeccccEEeeeEeeeecCCCccEEEcCCccccceEEcCcccCcEEEEecCCCeEeccccCc
Confidence 45666666666666666666666666666666677777777777777777777777777777777777777777777777
Q ss_pred eEeeeEEEEEccCCEEEEEEecCeEeeeEEEEecCCCEEEEEEeCCeeeEE
Q 005122 160 LMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGK 210 (713)
Q Consensus 160 ~~~G~G~~~~~nG~~Y~G~w~~g~~~G~G~~~~~nG~~YeG~w~~G~~~G~ 210 (713)
+.+|.|++...+|..|+|.|.+|+..|.|.+..++|.+|+|.|+.+++++.
T Consensus 88 ~F~g~G~~~~~~Gw~~~G~F~~Gq~~g~g~l~~~~g~vy~G~fk~g~f~~~ 138 (139)
T COG4642 88 KFRGQGTRGSFNGWLYIGRFTEGQANGKGFLLKEDGSVYTGMFKQGRFPKN 138 (139)
T ss_pred cccceEeeccccCCEEeeeecccccCCceeEEecCCcEEeeeEEeeecCCC
Confidence 777777777777777777777777777777777777777777777777654
No 10
>COG4642 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.76 E-value=3e-18 Score=157.10 Aligned_cols=133 Identities=29% Similarity=0.545 Sum_probs=129.2
Q ss_pred CCCEEEEEEECCeEeeeEEEEEcCCcEEEEEEECCEEeeeEEEEeCCCCEEEEEEeCCeeeeeeEEEeecCCeecccccC
Q 005122 56 NGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWSN 135 (713)
Q Consensus 56 nG~~Y~G~~~~g~~hG~G~~~~~dG~~YeG~w~~g~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~~G~~Y~G~w~~ 135 (713)
-+..|++.|..++..|.+++...++.++.|..+.++..|.|.+.+.+|.+|+|.++||+++|.|+++++|++.|+|.|++
T Consensus 7 ~g~~y~~~~~~g~~~g~s~~~~~~car~~g~~kqg~~~Gkgs~~~~~G~~Y~Gtl~ngk~nGqG~~~~~ngd~Y~g~F~s 86 (139)
T COG4642 7 FGLRYEGFFVRGKLEGLSTYDILGCARVGGSLKQGKLAGKGSLKYDNGRIYTGTLKNGKMNGQGTYTFANGDIYEGPFNS 86 (139)
T ss_pred hheeeeeEEecccccccceEEeccccEEeeeEeeeecCCCccEEEcCCccccceEEcCcccCcEEEEecCCCeEeccccC
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeeeeeEEecCCcEEEEEEeCceEeeeEEEEEccCCEEEEEEecCeEeeeE
Q 005122 136 DRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKG 188 (713)
Q Consensus 136 g~~~G~G~~~~~nG~~YeG~w~~g~~~G~G~~~~~nG~~Y~G~w~~g~~~G~G 188 (713)
++.+|.|+....+|..|.|.|.+|+.+|.|.+...+|.+|.|.++.+++++.|
T Consensus 87 ~~F~g~G~~~~~~Gw~~~G~F~~Gq~~g~g~l~~~~g~vy~G~fk~g~f~~~~ 139 (139)
T COG4642 87 GKFRGQGTRGSFNGWLYIGRFTEGQANGKGFLLKEDGSVYTGMFKQGRFPKNG 139 (139)
T ss_pred ccccceEeeccccCCEEeeeecccccCCceeEEecCCcEEeeeEEeeecCCCC
Confidence 99999999999999999999999999999999999999999999999998764
No 11
>KOG0231 consensus Junctional membrane complex protein Junctophilin and related MORN repeat proteins [General function prediction only]
Probab=99.76 E-value=7.1e-19 Score=196.93 Aligned_cols=174 Identities=32% Similarity=0.607 Sum_probs=166.4
Q ss_pred CceEEEEEcCCCCEEEEEEECCeEeeeEEEEEcCCcEEEEEEECCEEeeeEEEEeCCCCEEEEEEeCC----eeeeeeEE
Q 005122 46 GGVVVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSG----RMDGEGTF 121 (713)
Q Consensus 46 ~~~~~~~~~~nG~~Y~G~~~~g~~hG~G~~~~~dG~~YeG~w~~g~~~G~G~~~~~~G~~YeG~f~~g----~~~G~G~~ 121 (713)
....+...++||++|+|+|.+++++|.|++.+++|..|+|+|.++++||+|++.+|+|.+|+|.|+++ ..+|.+.+
T Consensus 131 ~~g~g~~~~~~g~~Y~G~~~~~k~sG~Gv~~~~~G~~Y~Gew~~n~~hG~G~~~~pdGsk~eg~~~~~~l~~l~~gk~~~ 210 (455)
T KOG0231|consen 131 RSGEGVIELPTGDTYEGEFKRGKRSGFGVYIRSDGLKYEGEWLDNRRHGYGVLTFPDGSKYEGQYKNNILEALRHGKGRY 210 (455)
T ss_pred cCccceEecCCCCEEEeeecCCcccccceEEecCCCEeeceecCCCccCCCeEEccCCCEEEEEeecccccccccceEEE
Confidence 45678889999999999999999999999999999999999999999999999999999999999999 89999999
Q ss_pred Eeec----------CCeecccccC-CeeeeeeeEEecCCcEEEEEEeCceEeeeEEEEEccCCEEEEEEecCeEeeeEEE
Q 005122 122 VGVE----------GDTYRGSWSN-DRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTL 190 (713)
Q Consensus 122 ~~~~----------G~~Y~G~w~~-g~~~G~G~~~~~nG~~YeG~w~~g~~~G~G~~~~~nG~~Y~G~w~~g~~~G~G~~ 190 (713)
.+.+ ..+|.++|.. +..|+.+...+++|..|.+.|..+..+|.+++.++++..|.|.|..+.++|.+++
T Consensus 211 ~~~~~~~~a~ra~~~~~~~~Ew~~~~~~~~~~~~e~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~~~~ 290 (455)
T KOG0231|consen 211 KFDDALEAAQRAATIARYSGEWAARGQSHGRGYAEAADGSAYAGQEDAGVARGLAKLHFPNGSGYVGEFKQDKKHGGGQF 290 (455)
T ss_pred EEeccchhhhhhhhhhhhhhhhhhhcCCCcceeEEeccccchhhhhhcCccccccceeccccccccCcceeccccCccee
Confidence 9986 6789999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCEEEEEEeCCeeeEEEEEEecCCC
Q 005122 191 SWNNGNRYEGCWDNGLPKGKGVFTWSNHE 219 (713)
Q Consensus 191 ~~~nG~~YeG~w~~G~~~G~G~~~~~dG~ 219 (713)
.+.++..+++.|..+.+.|.+.+++.++.
T Consensus 291 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 319 (455)
T KOG0231|consen 291 LFLNGSEYEGWFREGPKSGLGGFTFDKGP 319 (455)
T ss_pred eeccccccccccccCccccccccccCCCC
Confidence 99999999999999999999999999987
No 12
>KOG0231 consensus Junctional membrane complex protein Junctophilin and related MORN repeat proteins [General function prediction only]
Probab=99.69 E-value=2.3e-17 Score=184.88 Aligned_cols=169 Identities=28% Similarity=0.510 Sum_probs=154.9
Q ss_pred EEEcCCCCEEEEEEECCeEeeeEEEEEcCCcEEEEEEECCEEeeeEEEEeCCCCEEEEEEeCCeeeeeeEEEeecCCeec
Q 005122 51 EKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYR 130 (713)
Q Consensus 51 ~~~~~nG~~Y~G~~~~g~~hG~G~~~~~dG~~YeG~w~~g~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~~G~~Y~ 130 (713)
+..-++...|.|.. +...|.|...+.+|++|+|+|++++++|.|+.++++|..|+|+|.++++||+|++++++|.+|+
T Consensus 115 ~~~~~~~~~~~~~~--~~~~g~g~~~~~~g~~Y~G~~~~~k~sG~Gv~~~~~G~~Y~Gew~~n~~hG~G~~~~pdGsk~e 192 (455)
T KOG0231|consen 115 ELLSTDSGGEEGEE--GTRSGEGVIELPTGDTYEGEFKRGKRSGFGVYIRSDGLKYEGEWLDNRRHGYGVLTFPDGSKYE 192 (455)
T ss_pred ceecCCcccccccc--cccCccceEecCCCCEEEeeecCCcccccceEEecCCCEeeceecCCCccCCCeEEccCCCEEE
Confidence 33334444455544 6788999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCC----eeeeeeeEEecC----------CcEEEEEEeC-ceEeeeEEEEEccCCEEEEEEecCeEeeeEEEEecCC
Q 005122 131 GSWSND----RKHGYGEKRYAN----------GDVYRGSWRF-NLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNG 195 (713)
Q Consensus 131 G~w~~g----~~~G~G~~~~~n----------G~~YeG~w~~-g~~~G~G~~~~~nG~~Y~G~w~~g~~~G~G~~~~~nG 195 (713)
|+|+++ .+||.|.+.+.+ ..+|.++|.+ +..|+.+.+...+|..|.+.|..+..+|.+.+.++|+
T Consensus 193 g~~~~~~l~~l~~gk~~~~~~~~~~~a~ra~~~~~~~~Ew~~~~~~~~~~~~e~~~g~~~~~~~~~~~~~g~~~~~~~~~ 272 (455)
T KOG0231|consen 193 GQYKNNILEALRHGKGRYKFDDALEAAQRAATIARYSGEWAARGQSHGRGYAEAADGSAYAGQEDAGVARGLAKLHFPNG 272 (455)
T ss_pred EEeecccccccccceEEEEEeccchhhhhhhhhhhhhhhhhhhcCCCcceeEEeccccchhhhhhcCccccccceecccc
Confidence 999999 899999999986 7899999988 9999999999999999999999999999999999999
Q ss_pred CEEEEEEeCCeeeEEEEEEecCCCcc
Q 005122 196 NRYEGCWDNGLPKGKGVFTWSNHENM 221 (713)
Q Consensus 196 ~~YeG~w~~G~~~G~G~~~~~dG~~y 221 (713)
..|.|.|..+.++|.+++.+.++..+
T Consensus 273 ~~~~g~~~~~~~~g~~~~~~~~~~~~ 298 (455)
T KOG0231|consen 273 SGYVGEFKQDKKHGGGQFLFLNGSEY 298 (455)
T ss_pred ccccCcceeccccCcceeeecccccc
Confidence 99999999999999999999999887
No 13
>COG2849 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.11 E-value=0.00018 Score=74.51 Aligned_cols=130 Identities=22% Similarity=0.288 Sum_probs=106.2
Q ss_pred EeeeEEEEeCCCC-EEEEEEeCCeeeeeeEEEeecCCee-cccccCCeeeeeeeEEecCCcE-EEEEEeCceEeeeEEEE
Q 005122 92 ASGKGKFSWPSGA-TYEGGFKSGRMDGEGTFVGVEGDTY-RGSWSNDRKHGYGEKRYANGDV-YRGSWRFNLMDGYGKYA 168 (713)
Q Consensus 92 ~~G~G~~~~~~G~-~YeG~f~~g~~~G~G~~~~~~G~~Y-~G~w~~g~~~G~G~~~~~nG~~-YeG~w~~g~~~G~G~~~ 168 (713)
.+|.-..+.++|. ...-.+++|.++|.-..++++|... .-.|++|+.||.-..+|+||.. ++..|+++.++|..+.+
T Consensus 85 ~~g~~~~~~~ng~~~~~~~~kNG~~~g~~~~~y~nGk~~~~~~~~ng~~~G~~~~yy~nG~~~~e~~~kn~~~~g~~k~y 164 (230)
T COG2849 85 FTGIVEKYYENGELEAAIYYKNGKLDGETKEFYENGKLKSEYNYKNGKLHGIQKEYYENGKLKSETVYKNGKLEGIAKTY 164 (230)
T ss_pred CcceeeEeecCCeEEEEEEecCCceeeeEEEEEcCCcEeEEEEecCCcccceEEEEEcCCCEEEEEEEeCCCccccEEEE
Confidence 4666666666776 4677788889998888888888754 5678888999999999998885 78899998888888888
Q ss_pred EccCCE-EEEEEecCeEeeeEEEEecCCC-EEEEEEeCCeeeEEEEEEecCCCcc
Q 005122 169 WSDGNV-YEGEWKNGVIFGKGTLSWNNGN-RYEGCWDNGLPKGKGVFTWSNHENM 221 (713)
Q Consensus 169 ~~nG~~-Y~G~w~~g~~~G~G~~~~~nG~-~YeG~w~~G~~~G~G~~~~~dG~~y 221 (713)
+++|.. .+-.+++|.++|.-..++.||. ..+..|++|+.+|.-.++...|.+.
T Consensus 165 y~nGkl~~e~~~knG~~~G~~k~Y~enGkl~~e~~~kng~~~G~~~~yde~G~~i 219 (230)
T COG2849 165 YENGKLLSEVPYKNGKKNGVVKIYYENGKLVEEVTYKNGKLDGVVKEYDEAGKLI 219 (230)
T ss_pred cCCCcEEEeecccCCcccceEEEEccCCCEeEEEEecCCcccccEEEEecCCCEE
Confidence 899874 6778888999999999999988 5789999999999888888777654
No 14
>COG2849 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.03 E-value=0.00014 Score=75.29 Aligned_cols=139 Identities=20% Similarity=0.271 Sum_probs=119.8
Q ss_pred EeeeEEEEEcCC-cEEEEEEECCEEeeeEEEEeCCCCE-EEEEEeCCeeeeeeEEEeecCC-eecccccCCeeeeeeeEE
Q 005122 69 PHGVGKYVWSDR-CMYEGEWRKGRASGKGKFSWPSGAT-YEGGFKSGRMDGEGTFVGVEGD-TYRGSWSNDRKHGYGEKR 145 (713)
Q Consensus 69 ~hG~G~~~~~dG-~~YeG~w~~g~~~G~G~~~~~~G~~-YeG~f~~g~~~G~G~~~~~~G~-~Y~G~w~~g~~~G~G~~~ 145 (713)
.+|.-.....+| ....-.+++|+++|....++++|.. -+-.|++|..+|.-..+++||. .++..|+++.+.|.-..+
T Consensus 85 ~~g~~~~~~~ng~~~~~~~~kNG~~~g~~~~~y~nGk~~~~~~~~ng~~~G~~~~yy~nG~~~~e~~~kn~~~~g~~k~y 164 (230)
T COG2849 85 FTGIVEKYYENGELEAAIYYKNGKLDGETKEFYENGKLKSEYNYKNGKLHGIQKEYYENGKLKSETVYKNGKLEGIAKTY 164 (230)
T ss_pred CcceeeEeecCCeEEEEEEecCCceeeeEEEEEcCCcEeEEEEecCCcccceEEEEEcCCCEEEEEEEeCCCccccEEEE
Confidence 466666666776 4577888999999999999999986 5668999999999999999998 679999999999999999
Q ss_pred ecCCcE-EEEEEeCceEeeeEEEEEccCC-EEEEEEecCeEeeeEEEEecCCC-EEEEEEeCCee
Q 005122 146 YANGDV-YRGSWRFNLMDGYGKYAWSDGN-VYEGEWKNGVIFGKGTLSWNNGN-RYEGCWDNGLP 207 (713)
Q Consensus 146 ~~nG~~-YeG~w~~g~~~G~G~~~~~nG~-~Y~G~w~~g~~~G~G~~~~~nG~-~YeG~w~~G~~ 207 (713)
|+||.+ .+-.+++|.++|.-..++.+|. ..+..|++|+.+|.-..+..+|. +-+..+.+|+.
T Consensus 165 y~nGkl~~e~~~knG~~~G~~k~Y~enGkl~~e~~~kng~~~G~~~~yde~G~~i~~~~y~~g~~ 229 (230)
T COG2849 165 YENGKLLSEVPYKNGKKNGVVKIYYENGKLVEEVTYKNGKLDGVVKEYDEAGKLIKETLYKNGKE 229 (230)
T ss_pred cCCCcEEEeecccCCcccceEEEEccCCCEeEEEEecCCcccccEEEEecCCCEEEEEEeeCCcC
Confidence 999986 6788999999999999999998 58899999999999999988887 45677777753
No 15
>smart00698 MORN Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Probab=97.32 E-value=0.00035 Score=47.19 Aligned_cols=22 Identities=55% Similarity=1.161 Sum_probs=16.8
Q ss_pred EEEEEEeCCeeeEEEEEEecCC
Q 005122 197 RYEGCWDNGLPKGKGVFTWSNH 218 (713)
Q Consensus 197 ~YeG~w~~G~~~G~G~~~~~dG 218 (713)
+|+|+|.+|++||.|++.|+|.
T Consensus 2 ~Y~G~w~~g~~hG~G~~~~~d~ 23 (26)
T smart00698 2 RYEGEWRNGKRHGRGVYTYANX 23 (26)
T ss_pred eEEEEEECCeEEeeEEEEeccc
Confidence 5778888888888888777764
No 16
>smart00698 MORN Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Probab=97.17 E-value=0.00059 Score=46.06 Aligned_cols=22 Identities=45% Similarity=1.013 Sum_probs=16.8
Q ss_pred EEEEEEecCeEeeeEEEEecCC
Q 005122 174 VYEGEWKNGVIFGKGTLSWNNG 195 (713)
Q Consensus 174 ~Y~G~w~~g~~~G~G~~~~~nG 195 (713)
+|+|+|++|++||.|+++|+|.
T Consensus 2 ~Y~G~w~~g~~hG~G~~~~~d~ 23 (26)
T smart00698 2 RYEGEWRNGKRHGRGVYTYANX 23 (26)
T ss_pred eEEEEEECCeEEeeEEEEeccc
Confidence 5778888888888888877754
No 17
>PF02493 MORN: MORN repeat; InterPro: IPR003409 The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins (). The function of this motif is unknown.; PDB: 1H3I_B 1MT6_A 1N6C_A 3OS5_A 3M53_A 3M55_A 3CBP_A 4E47_B 3M58_A 3CBO_A ....
Probab=97.16 E-value=0.0003 Score=45.80 Aligned_cols=22 Identities=45% Similarity=1.023 Sum_probs=11.2
Q ss_pred EEEEEeCCeeeEEEEEEecCCC
Q 005122 198 YEGCWDNGLPKGKGVFTWSNHE 219 (713)
Q Consensus 198 YeG~w~~G~~~G~G~~~~~dG~ 219 (713)
|+|.|++|++||.|+++|+||.
T Consensus 1 Y~G~~~~g~~~G~G~~~~~~G~ 22 (23)
T PF02493_consen 1 YEGEWKNGKKHGYGVYTFPDGD 22 (23)
T ss_dssp ECCEEETTEEECEEEEE-TTS-
T ss_pred CEEEEEECcccccEEEEeCCCC
Confidence 4555555555555555555553
No 18
>PF02493 MORN: MORN repeat; InterPro: IPR003409 The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins (). The function of this motif is unknown.; PDB: 1H3I_B 1MT6_A 1N6C_A 3OS5_A 3M53_A 3M55_A 3CBP_A 4E47_B 3M58_A 3CBO_A ....
Probab=97.13 E-value=0.00039 Score=45.28 Aligned_cols=22 Identities=50% Similarity=1.087 Sum_probs=12.5
Q ss_pred EEEEEecCeEeeeEEEEecCCC
Q 005122 175 YEGEWKNGVIFGKGTLSWNNGN 196 (713)
Q Consensus 175 Y~G~w~~g~~~G~G~~~~~nG~ 196 (713)
|+|+|.+|+++|.|+++++||+
T Consensus 1 Y~G~~~~g~~~G~G~~~~~~G~ 22 (23)
T PF02493_consen 1 YEGEWKNGKKHGYGVYTFPDGD 22 (23)
T ss_dssp ECCEEETTEEECEEEEE-TTS-
T ss_pred CEEEEEECcccccEEEEeCCCC
Confidence 5566666666666666666654
No 19
>PLN02667 inositol polyphosphate multikinase
Probab=72.73 E-value=6.4 Score=42.30 Aligned_cols=67 Identities=18% Similarity=0.279 Sum_probs=45.8
Q ss_pred EeeCCeEEEEecC-----HHHHHHHHHHhHHhHHHHcccC------CcceeeeeeeEEEEecCCeEEEEEEEceeccCcc
Q 005122 419 LTQDDRFMIKTVK-----KSEVKVLIRMLPSYYQHVCQYK------NTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEY 487 (713)
Q Consensus 419 ~t~D~rfiiKti~-----~~E~~~l~~~lp~Y~~~~~~~~------~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~ 487 (713)
++.|+-.|+|-+. ..|+++-..+. ..+ ..++|+|+|...+....++ .+|||+||-..-
T Consensus 22 L~~~~g~~~Kp~~~~~rg~rE~~FY~~~~--------~~~~~~~~L~~~~P~y~G~~~~~~~~~~--~~i~LeDLt~g~- 90 (286)
T PLN02667 22 LVDDSGRFYKPLQDDSRGEREAAFYESFS--------SDTRVPDHIRRFFPVFHGTQLVEASDGS--GLLVLEDLLAGY- 90 (286)
T ss_pred eEcCCCcEEeccCCcccchHHHHHHHHHh--------ccccchHHHHhhCcccceeEeeccCCCc--eeEEehHHhcCC-
Confidence 3557778899997 68888755443 322 2678999999888655544 579999996542
Q ss_pred ceEEEEEec
Q 005122 488 RIHRRFDLK 496 (713)
Q Consensus 488 ~i~~~yDLK 496 (713)
.-..+=|||
T Consensus 91 ~~PcVlDlK 99 (286)
T PLN02667 91 TKPCVMDVK 99 (286)
T ss_pred CCCeEEEEE
Confidence 233456666
No 20
>PF07202 Tcp10_C: T-complex protein 10 C-terminus; InterPro: IPR009852 Proteins in this entry include T-complex 10, involved in spermatogenesis in mice, and centromere protein J, which not only inhibits microtubule nucleation from the centrosome, but also depolymerises taxol-stabilised microtubules [, ]. These proteins share an approximately 180 residue C-terminal region which contains unsual G repreats [].
Probab=69.41 E-value=60 Score=32.52 Aligned_cols=11 Identities=36% Similarity=0.806 Sum_probs=4.8
Q ss_pred eeEEEEecCCC
Q 005122 186 GKGTLSWNNGN 196 (713)
Q Consensus 186 G~G~~~~~nG~ 196 (713)
|.-++.++||.
T Consensus 119 G~k~i~~pnGq 129 (179)
T PF07202_consen 119 GDKTITFPNGQ 129 (179)
T ss_pred CcEEEEeCCCc
Confidence 33344444444
No 21
>PF07202 Tcp10_C: T-complex protein 10 C-terminus; InterPro: IPR009852 Proteins in this entry include T-complex 10, involved in spermatogenesis in mice, and centromere protein J, which not only inhibits microtubule nucleation from the centrosome, but also depolymerises taxol-stabilised microtubules [, ]. These proteins share an approximately 180 residue C-terminal region which contains unsual G repreats [].
Probab=56.44 E-value=1.5e+02 Score=29.72 Aligned_cols=11 Identities=27% Similarity=0.534 Sum_probs=4.5
Q ss_pred EEEEEEecCCC
Q 005122 209 GKGVFTWSNHE 219 (713)
Q Consensus 209 G~G~~~~~dG~ 219 (713)
|.-++.++||+
T Consensus 119 G~k~i~~pnGq 129 (179)
T PF07202_consen 119 GDKTITFPNGQ 129 (179)
T ss_pred CcEEEEeCCCc
Confidence 33344444443
No 22
>PF12226 Astro_capsid_p: Turkey astrovirus capsid protein; InterPro: IPR022027 This family of proteins is found in viruses. Proteins in this family are typically between 241 and 261 amino acids in length. These proteins are capsid proteins from various astrovirus strains. ; PDB: 3TS3_D.
Probab=50.03 E-value=6.1 Score=38.65 Aligned_cols=49 Identities=22% Similarity=0.564 Sum_probs=28.3
Q ss_pred EEEcCHHHH---HHHHHHcCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCeEEEE
Q 005122 372 WKDYCPMVF---RHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIK 428 (713)
Q Consensus 372 ~k~Y~P~vF---~~lR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~t~D~rfiiK 428 (713)
++.|.|..= ..|..+.++.+.|=..|+. .+.|+-+++||.|.|.||||=
T Consensus 102 vkkYyP~TTnld~~lK~RlnL~EgDPViS~G--------Dt~GRRaALFYRtSdEr~ill 153 (230)
T PF12226_consen 102 VKKYYPGTTNLDQQLKDRLNLTEGDPVISMG--------DTTGRRAALFYRTSDERYILL 153 (230)
T ss_dssp EEEB-GGG--S-HHHHHHHT--TT-EEEEEE--------ETT--EEEEEEETTTTEEEEE
T ss_pred hhhcCCCCccHHHHHHHhhccccCCceeeec--------CCCCceEEEEEeccCceEEEE
Confidence 356666432 3566666665544333332 367999999999999999973
No 23
>PF14977 FAM194: FAM194 protein
Probab=45.79 E-value=1.1e+02 Score=31.42 Aligned_cols=81 Identities=20% Similarity=0.233 Sum_probs=49.5
Q ss_pred EEecCCcEEEEEEeCceEeeeEEEEEccCCEEEEEEecCeEeeeEEEEecCCC--EEEEEEeCCeeeEEEEEEecCCCcc
Q 005122 144 KRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGN--RYEGCWDNGLPKGKGVFTWSNHENM 221 (713)
Q Consensus 144 ~~~~nG~~YeG~w~~g~~~G~G~~~~~nG~~Y~G~w~~g~~~G~G~~~~~nG~--~YeG~w~~G~~~G~G~~~~~dG~~y 221 (713)
..|++|.++.=.| .+|-|..+||+|++=.-.... ...+.-.+++.|.. ..-+.|. .+|.|++++++|.+.
T Consensus 9 ~~Y~~g~~f~~~f----~DGsg~i~YPSGnlAi~~~~~-~~~~~~~~v~eD~~~~~ilA~Fd---~~G~g~~y~~~g~~~ 80 (208)
T PF14977_consen 9 KYYKNGRKFHYMF----PDGSGQIFYPSGNLAICISPT-CRGGFTYIVYEDSPENTILALFD---SSGHGTCYHPNGNIW 80 (208)
T ss_pred eeCCCCcEEEEEc----CCCCEEEEeCCCCEEEEEecc-CCCceEEEEEecCCCCceEEEEc---CCCCEEEEcCCCCEE
Confidence 4466666653333 456777788888765555544 44445555555544 3555554 468899999999866
Q ss_pred --ccCCCccEEec
Q 005122 222 --KNDERDNFEVM 232 (713)
Q Consensus 222 --~~~~~G~~~~~ 232 (713)
.....|++.+.
T Consensus 81 l~l~~~gG~~~D~ 93 (208)
T PF14977_consen 81 LVLNQEGGQYFDQ 93 (208)
T ss_pred EEEECCCCEEEcC
Confidence 33456666655
No 24
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=29.45 E-value=2.1e+02 Score=28.06 Aligned_cols=73 Identities=14% Similarity=0.227 Sum_probs=39.4
Q ss_pred CCCCccceEEEe-eCCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEceecc
Q 005122 409 SPGKSGSFFYLT-QDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFC 484 (713)
Q Consensus 409 s~GKSGs~F~~t-~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~ 484 (713)
+.|.++..|.++ .+++||||.........-..---..++++..+.- -.|++++.-..... ....++||.-+-.
T Consensus 6 ~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~-pvP~~~~~~~~~~~--~~~~~~~~~~i~g 79 (239)
T PF01636_consen 6 SGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEHGI-PVPRVLAFDTSDEF--NGFPYLLMEYIPG 79 (239)
T ss_dssp EESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTS-BS--EEEEEEETEE--TSEEEEEEEEESS
T ss_pred CCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCC-CCceEEeecccccc--cccceEEEEEecc
Confidence 457777666555 4569999999777222222222234466654422 56777753322211 1237888888754
No 25
>PRK10345 hypothetical protein; Provisional
Probab=27.75 E-value=1.9e+02 Score=29.42 Aligned_cols=67 Identities=15% Similarity=0.352 Sum_probs=40.2
Q ss_pred CCCCccceEEEeeCCeEEEEecCHH----HHHHHHHHhHHhHHHHc----ccCCcceeeeeeeEEEEecCCeEEEEEEEc
Q 005122 409 SPGKSGSFFYLTQDDRFMIKTVKKS----EVKVLIRMLPSYYQHVC----QYKNTLVTKFFGVHCVKPVGGQKTRFIVMG 480 (713)
Q Consensus 409 s~GKSGs~F~~t~D~rfiiKti~~~----E~~~l~~~lp~Y~~~~~----~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~ 480 (713)
..|.+|..|--..|...+||.+... +....+++ .|+..+. .+|+ |+++||.+.-.. +.-.++.+||+
T Consensus 11 G~G~~~~Vy~hp~~~~k~IKv~~~~~~~~~~~~~rEi--~~l~~L~~~~~~h~n--Ivr~yg~~et~~-g~g~v~~~I~e 85 (210)
T PRK10345 11 GTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRREL--KYYAHLSRRLIDWSG--IPRYYGTVETDC-GTGYVYDVIAD 85 (210)
T ss_pred cCCCceEEEECCCCcCeEEEEEeccccchHHHHHHHH--HHHHHhhccCCCCcc--cceeeEEEEeCC-CCeEEEEEEec
Confidence 4566888886556888899988754 21222222 2455553 3454 999999886542 22344556776
No 26
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=27.66 E-value=1.8e+02 Score=27.28 Aligned_cols=108 Identities=19% Similarity=0.288 Sum_probs=60.9
Q ss_pred CCCccceEEEee---CCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEceeccCc
Q 005122 410 PGKSGSFFYLTQ---DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSE 486 (713)
Q Consensus 410 ~GKSGs~F~~t~---D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~ 486 (713)
.|..|..|-... +.+++||.+...........+.+-++.+..-.+.-++++++..... ...++||+.+-...
T Consensus 3 ~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~~~e~~~~~~ 77 (215)
T cd00180 3 EGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-----NHLYLVMEYCEGGS 77 (215)
T ss_pred cCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-----CeEEEEEecCCCCc
Confidence 567777776665 5789999998886643333344444444433335566666655432 45678887653211
Q ss_pred cceEEEEEecCCcccccCCCCccccccccccccccccceeccChHHHHHHHHHHHHHHHhhhcCCc
Q 005122 487 YRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIRQIDRDCEFLEAERI 552 (713)
Q Consensus 487 ~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~i 552 (713)
+... +.... ..+.......++.+|-+=..+|.+.++
T Consensus 78 --l~~~------------------------~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~~ 113 (215)
T cd00180 78 --LKDL------------------------LKENE----GKLSEDEILRILLQILEGLEYLHSNGI 113 (215)
T ss_pred --HHHH------------------------HHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 1000 00000 123455566677788777788888754
No 27
>KOG4620 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.45 E-value=54 Score=27.75 Aligned_cols=37 Identities=24% Similarity=0.555 Sum_probs=28.9
Q ss_pred chhhHHHHHhhhccCCCCceeeChhhHHHHHHHHHHhhccc
Q 005122 670 ISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFIHRIFRE 710 (713)
Q Consensus 670 ~~KklE~~~Ks~~~~~~~iS~v~P~~Y~~RF~~fi~~iF~~ 710 (713)
+.|.+-|+|..+..-... .|..|+.||++||..=|..
T Consensus 7 LQrqVlhlYR~~lraa~~----Kp~~~~~~~m~fvh~EFrk 43 (80)
T KOG4620|consen 7 LQRQVLHLYRDLLRAARG----KPGAEARRWMAFVHAEFRK 43 (80)
T ss_pred HHHHHHHHHHHHHHHhcC----CCchHHHHHHHHHHHHHHH
Confidence 567788888876554443 7899999999999987754
No 28
>PF12915 DUF3833: Protein of unknown function (DUF3833); InterPro: IPR024409 This is a family of uncharacterised proteins found in Proteobacteria.
Probab=25.68 E-value=2e+02 Score=28.38 Aligned_cols=53 Identities=19% Similarity=0.387 Sum_probs=0.0
Q ss_pred EEecCeEeeeEEEEecCCCE-------EEEEEeCCeeeEEEEEEecCCCcc------ccCCCccEE
Q 005122 178 EWKNGVIFGKGTLSWNNGNR-------YEGCWDNGLPKGKGVFTWSNHENM------KNDERDNFE 230 (713)
Q Consensus 178 ~w~~g~~~G~G~~~~~nG~~-------YeG~w~~G~~~G~G~~~~~dG~~y------~~~~~G~~~ 230 (713)
+|.+|.....|++....|.+ .+|.|..+..+=.=.|.|.||..- .+.+.|.|.
T Consensus 27 ~fF~G~~~A~G~~~dr~G~v~rrF~v~i~g~w~g~~~tL~E~F~y~DGe~q~R~W~l~~~~~g~y~ 92 (164)
T PF12915_consen 27 EFFNGKLVAWGMFQDRSGKVTRRFTVDIDGSWDGNTGTLDEDFVYDDGETQTRVWTLTKTGDGSYT 92 (164)
T ss_pred HHCCCcEEEEEEEECCCCCEEEEEEEEEEEEEECCEEEEEEEEEECCCCEEEEEEEEEECCCCcEE
No 29
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=22.89 E-value=4.6e+02 Score=26.15 Aligned_cols=69 Identities=10% Similarity=0.075 Sum_probs=39.8
Q ss_pred CCCCccceEEEee---CC---eEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEcee
Q 005122 409 SPGKSGSFFYLTQ---DD---RFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (713)
Q Consensus 409 s~GKSGs~F~~t~---D~---rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nl 482 (713)
+.|..|..|--.. .+ .+.||.++........+-++.-..-+..-.+.-+++++|.+.- ...++||+.+
T Consensus 4 g~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~e~~ 77 (257)
T cd05040 4 GDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVTELA 77 (257)
T ss_pred CccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEEEec
Confidence 3466666664432 22 4899999987774323333333334443344457788887643 4467888865
Q ss_pred c
Q 005122 483 F 483 (713)
Q Consensus 483 f 483 (713)
.
T Consensus 78 ~ 78 (257)
T cd05040 78 P 78 (257)
T ss_pred C
Confidence 3
No 30
>PF14977 FAM194: FAM194 protein
Probab=22.32 E-value=2.5e+02 Score=28.91 Aligned_cols=12 Identities=33% Similarity=0.587 Sum_probs=6.5
Q ss_pred eeeEEEEEccCC
Q 005122 162 DGYGKYAWSDGN 173 (713)
Q Consensus 162 ~G~G~~~~~nG~ 173 (713)
+|.|..++++|+
T Consensus 67 ~G~g~~y~~~g~ 78 (208)
T PF14977_consen 67 SGHGTCYHPNGN 78 (208)
T ss_pred CCCEEEEcCCCC
Confidence 455555555554
No 31
>PF07661 MORN_2: MORN repeat variant; InterPro: IPR011652 This entry represents an apparent variant of the IPR003409 from INTERPRO repeat.
Probab=22.14 E-value=1.4e+02 Score=18.40 Aligned_cols=19 Identities=26% Similarity=0.527 Sum_probs=9.1
Q ss_pred eeeEEEEecCCC-EEEEEEe
Q 005122 185 FGKGTLSWNNGN-RYEGCWD 203 (713)
Q Consensus 185 ~G~G~~~~~nG~-~YeG~w~ 203 (713)
+|.-+.+++||. ..++.|+
T Consensus 2 ~G~~~~yy~nG~l~~~~~y~ 21 (22)
T PF07661_consen 2 DGEWKFYYENGKLKSEGHYK 21 (22)
T ss_pred cceEEEEeCCCCEEEEEEEE
Confidence 344455555555 2444443
No 32
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=21.31 E-value=69 Score=25.65 Aligned_cols=22 Identities=36% Similarity=0.770 Sum_probs=15.9
Q ss_pred cccccCCCCccceEEEeeCCeEEE
Q 005122 404 LRELSSPGKSGSFFYLTQDDRFMI 427 (713)
Q Consensus 404 l~~~~s~GKSGs~F~~t~D~rfii 427 (713)
|-|... +.|-.||.|.|++|+|
T Consensus 25 lyeV~~--~~~~i~Y~~~dg~yli 46 (57)
T PF10411_consen 25 LYEVVL--KGGGILYVDEDGRYLI 46 (57)
T ss_dssp EEEEEE---TTEEEEEETTSSEEE
T ss_pred eEEEEE--CCCeEEEEcCCCCEEE
Confidence 444444 3456999999999997
No 33
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=20.64 E-value=6.4e+02 Score=25.19 Aligned_cols=115 Identities=19% Similarity=0.345 Sum_probs=60.5
Q ss_pred CCCCccceEEEee---CCeEEEEecCHHHHHHHHHHhHHhHHHHccc-CCcceeeeeeeEEEEec-CCeEEEEEEEceec
Q 005122 409 SPGKSGSFFYLTQ---DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQY-KNTLVTKFFGVHCVKPV-GGQKTRFIVMGNLF 483 (713)
Q Consensus 409 s~GKSGs~F~~t~---D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~-~~tLL~k~~Gl~~i~~~-~~~~~~fvVM~Nlf 483 (713)
..|..|+.|.... +..++||.++..+... .-+..-..-+..- .+.-+++++|.+.-... ......++||+.+-
T Consensus 15 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~ 92 (275)
T cd06608 15 GEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE--EEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCG 92 (275)
T ss_pred cCCCCeEEEEEEECCCCcEEEEEEEecCchhH--HHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCC
Confidence 3466666665443 3579999987543321 1122222223222 24567889998765432 23466788998643
Q ss_pred cCccceEEEEEecCCcccccCCCCccccccccccccccccceeccChHHHHHHHHHHHHHHHhhhcCCc
Q 005122 484 CSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIRQIDRDCEFLEAERI 552 (713)
Q Consensus 484 ~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~i 552 (713)
... +. |+ ..+... ++ -.+.......++.||-.=.++|.+.+|
T Consensus 93 ~~~--L~---~~----~~~~~~------------~~------~~~~~~~~~~~~~ql~~al~~lH~~~i 134 (275)
T cd06608 93 GGS--VT---DL----VKGLRK------------KG------KRLKEEWIAYILRETLRGLAYLHENKV 134 (275)
T ss_pred CCc--HH---HH----HHHHhh------------cC------CCCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 211 00 00 000000 00 123445566678888888889988875
No 34
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=20.28 E-value=6e+02 Score=27.29 Aligned_cols=68 Identities=9% Similarity=0.143 Sum_probs=35.6
Q ss_pred CCCccceEEEee---CCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEcee
Q 005122 410 PGKSGSFFYLTQ---DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (713)
Q Consensus 410 ~GKSGs~F~~t~---D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nl 482 (713)
.|..|.+|.... ...++||.+.......+.+.+..=..-+..-.+.-|+++++++.. ....++||+.+
T Consensus 84 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~ 154 (353)
T PLN00034 84 SGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH-----NGEIQVLLEFM 154 (353)
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-----CCeEEEEEecC
Confidence 466677766543 467999998543222222211122222222233446788887643 23356788754
Done!