Query 005122
Match_columns 713
No_of_seqs 532 out of 2474
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 16:01:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005122.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005122hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ybx_A Phosphatidylinositol-5- 100.0 1.9E-86 6.4E-91 724.0 25.3 373 303-708 12-394 (394)
2 2gk9_A Phosphatidylinositol-4- 100.0 4.2E-85 1.4E-89 713.7 16.5 376 304-709 5-392 (392)
3 1h3i_A Histone H3 lysine 4 spe 99.9 1.6E-26 5.5E-31 244.9 15.2 131 77-207 2-139 (293)
4 1h3i_A Histone H3 lysine 4 spe 99.9 3.2E-26 1.1E-30 242.6 16.9 132 53-184 1-139 (293)
5 2f69_A Histone-lysine N-methyl 98.8 2E-09 6.9E-14 111.6 5.2 54 154-207 3-59 (261)
6 2f69_A Histone-lysine N-methyl 98.8 2.1E-09 7.3E-14 111.5 5.1 56 130-185 2-60 (261)
7 2aqx_A Predicted: inositol 1,4 80.9 2.5 8.6E-05 43.9 6.8 74 408-496 19-92 (289)
8 1w2f_A Inositol-trisphosphate 75.0 4.5 0.00015 41.8 6.6 72 411-496 8-79 (276)
9 2iew_A Inositol polyphosphate 73.0 4 0.00014 43.8 5.9 84 410-496 15-133 (363)
10 2a98_A Inositol 1,4,5-trisphos 72.5 4.4 0.00015 41.4 5.7 62 422-496 1-62 (259)
11 3iot_A Maltose-binding protein 55.3 1.9 6.5E-05 46.9 -0.9 6 52-57 433-438 (449)
12 3ts3_A Capsid polyprotein; vir 50.4 3.9 0.00013 38.5 0.5 39 382-428 130-168 (208)
13 4frf_A Inositol polyphosphate 41.2 8.7 0.0003 39.5 1.4 74 409-496 5-89 (275)
14 3q4u_A Activin receptor type-1 37.9 78 0.0027 31.2 8.0 74 406-482 14-88 (301)
15 3g2f_A Bone morphogenetic prot 36.3 53 0.0018 33.2 6.6 73 408-482 21-94 (336)
16 3hmm_A TGF-beta receptor type- 36.2 57 0.0019 33.3 6.8 110 404-550 7-119 (303)
17 3op5_A Serine/threonine-protei 34.6 2E+02 0.0068 29.5 10.9 115 407-553 42-174 (364)
18 2v62_A Serine/threonine-protei 31.3 2.3E+02 0.0078 28.7 10.6 114 407-553 44-173 (345)
19 3gxj_A TGF-beta receptor type- 27.2 80 0.0027 31.1 6.0 74 407-483 10-84 (303)
20 3ll6_A Cyclin G-associated kin 26.7 93 0.0032 31.1 6.4 113 408-551 36-156 (337)
21 2pzi_A Probable serine/threoni 24.5 1.6E+02 0.0055 33.5 8.5 111 408-553 88-204 (681)
22 3ipq_A Oxysterols receptor LXR 23.4 17 0.00058 37.1 0.0 7 388-394 186-192 (283)
23 4e5w_A Tyrosine-protein kinase 23.0 1.8E+02 0.0062 28.5 7.7 112 409-553 30-148 (302)
24 3omv_A RAF proto-oncogene seri 21.9 2.4E+02 0.0081 28.9 8.5 105 407-553 43-154 (307)
25 1nxk_A MAP kinase-activated pr 20.8 2.3E+02 0.0078 29.7 8.3 65 408-483 70-142 (400)
26 3soc_A Activin receptor type-2 20.2 1.9E+02 0.0064 29.1 7.2 108 408-550 32-140 (322)
No 1
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A
Probab=100.00 E-value=1.9e-86 Score=723.96 Aligned_cols=373 Identities=31% Similarity=0.461 Sum_probs=263.7
Q ss_pred CCceEEeCCCcchHHHHHHHHHHHHhhcCC--ccccccCCcCCCCccceeeee---cCCCCCCCCCCccccceEEEEcCH
Q 005122 303 KPGHTISKGHKNYDLMLNLQLGIRHSVGKH--ASVMRELRQSDFEPKEKFWTR---FPPEGSKFTPPHQSMDFRWKDYCP 377 (713)
Q Consensus 303 ~~g~~i~~gh~~~~l~~~~~~Gi~~sv~~~--~~~~~~l~~~df~~~~k~~~~---f~~~~s~~~p~~~~~~f~~k~Y~P 377 (713)
-.|++.+..+.++.||.+|||||+|||+++ .+++.+|+++||++++|+++. |+++ .+|. +|+|++|||
T Consensus 12 ~~~~~~~~~r~~~~l~~~~~~Gi~~~v~~~~~~~~~~~L~~~df~~~~k~~~~~~~f~~~---~~p~----~f~~k~Y~P 84 (394)
T 2ybx_A 12 DLGTENLYFQSMDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKE---NMPS----HFKFKEYCP 84 (394)
T ss_dssp -----CCCCCCSSHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGGCEEEEEEEEESSSTT---TSCS----EEEEEEESH
T ss_pred CCCCcccccccchHHHHHHHHhHHHHHhhccCCCCccccChhHhhhheEEecccccCCcc---cCCC----CeEEEEECH
Confidence 357888999999999999999999999988 445667999999999999874 5555 3443 799999999
Q ss_pred HHHHHHHHHcCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCeEEEEecCHHHHHHHHHHhHHhHHHHc-ccCCcc
Q 005122 378 MVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVC-QYKNTL 456 (713)
Q Consensus 378 ~vF~~lR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~-~~~~tL 456 (713)
.+|++||++|||+++||+.|||.+.+|+ ++|+|||||+||+|.|+|||||||+++|+++|+++||.||+||. +||+||
T Consensus 85 ~~F~~LR~~~~i~~~dy~~Sl~~~~~~~-~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~TL 163 (394)
T 2ybx_A 85 MVFRNLRERFGIDDQDFQNSLTRSAPLP-NDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQYIVECHGITL 163 (394)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHSSCCEE-CC-----CCCEEECTTSSEEEEEECHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred HHHHHHHHHhCCCHHHHHHHhcCCCccc-cCCCCCccCEEEEeCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhcCCCcC
Confidence 9999999999999999999999887754 78999999999999999999999999999999999999999994 699999
Q ss_pred eeeeeeeEEEEecCCeEEEEEEEceeccCccceEEEEEecCCcccccCCCCccccccccccccccc---cceeccChHHH
Q 005122 457 VTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDL---DFVFRLDRSWF 533 (713)
Q Consensus 457 L~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~---~~~~~l~~~~~ 533 (713)
|+||||||+|++.+ +++|||||+|||++...||++||||||+++|.+.+++ ..+..+||||+|| ...+.|+++++
T Consensus 164 L~k~~Gly~v~~~~-~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~~LkD~df~~~~~~i~l~~~~k 241 (394)
T 2ybx_A 164 LPQFLGMYRLNVDG-VEIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKE-KAKELPTLKDNDFINEGQKIYIDDNNK 241 (394)
T ss_dssp SCCEEEEEEEEETT-EEEEEEEEECSSCSSSCCSEEEEECCSSSCCCCCHHH-HTSSSCEECHHHHHHTTCCCCCCHHHH
T ss_pred hhhhcEEEEEEECC-eEEEEEEEecCCCCCcceeeeeeecccccCCccCccc-cccCcceecccchHhcCCeEEECHHHH
Confidence 99999999999865 8999999999999988999999999999999997643 3345689999999 45789999999
Q ss_pred HHHHHHHHHHHHhhhcCCccccceeeEeeecCCCccccccCCCCCCccCCCCcCCCccccccccCCCCCchhhhcCCCCc
Q 005122 534 QELIRQIDRDCEFLEAERIMDYSLLIGLHFRDDYSGDEMKMSPNDKHCLDKRDSDIVGTFMRGYHLLPDMDWVMEGRGPH 613 (713)
Q Consensus 534 ~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (713)
+.|++||++||+||+++||||||||||||..+....+........ ...+....+..+-+. .++
T Consensus 242 ~~l~~qL~~D~~FL~~~~iMDYSLLvGIh~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~t----~~~--------- 304 (394)
T 2ybx_A 242 KVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVERAEQEEVECEEND----GEEEGESDGTHPVGT----PPD--------- 304 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTEESCEEEEEEEEHHHHHHHHHCC---------------------------------------
T ss_pred HHHHHHHHHHHHHHHHCCCccceeEEEEecccccchhhccccccc----cccccccccccccCC----Ccc---------
Confidence 999999999999999999999999999998764322111100000 000000000000000 000
Q ss_pred ccCCCCCccccccccccccccccCCCCCCCCCCCCCCCceeEEEEEEEeeeeecccchhhHHHHHhhhccCC-CCceeeC
Q 005122 614 LRLGANTPARAQRVSKIEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDP-SSISAVD 692 (713)
Q Consensus 614 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyy~GIIDiLq~Y~~~KklE~~~Ks~~~~~-~~iS~v~ 692 (713)
..+..+++...... .+++..... .. +....+++.++|||||||||||+||++|||||+||++++++ .+||||+
T Consensus 305 -~~~~~~~~~~~~~~-~~~~~~~d~---~~-i~~~~~~~~~~iyyiGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~iS~V~ 378 (394)
T 2ybx_A 305 -SPGNTLNSSPPLAP-GEFDPNIDV---YG-IKCHENSPRKEVYFMAIIXILTHYDAKKKAAHAAKTVKHGAGAEISTVN 378 (394)
T ss_dssp -----------CCCT-TCCCTTTST---TE-EECCTTCSSCEEEEEEEECCCEESCC-------------------CCCC
T ss_pred -cccccccccccccc-ccccccccc---cc-cccccCCCCceEEEEEEEEeeecCChhHHHHHHHHHhccCCCCCCceEC
Confidence 00111111100000 000000000 00 01113455678999999999999999999999999999875 6899999
Q ss_pred hhhHHHHHHHHHHhhc
Q 005122 693 PKLYSKRFRDFIHRIF 708 (713)
Q Consensus 693 P~~Y~~RF~~fi~~iF 708 (713)
|++|++||++||.+||
T Consensus 379 P~~Y~~RF~~fm~~if 394 (394)
T 2ybx_A 379 PEQYSKRFLDFIGHIL 394 (394)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999999987
No 2
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-85 Score=713.69 Aligned_cols=376 Identities=29% Similarity=0.454 Sum_probs=218.7
Q ss_pred CceEEeCCCcchHHHHHHHHHHHHhhcCC--ccccccCCcCCCCccceeeee---cCCCCCCCCCCccccceEEEEcCHH
Q 005122 304 PGHTISKGHKNYDLMLNLQLGIRHSVGKH--ASVMRELRQSDFEPKEKFWTR---FPPEGSKFTPPHQSMDFRWKDYCPM 378 (713)
Q Consensus 304 ~g~~i~~gh~~~~l~~~~~~Gi~~sv~~~--~~~~~~l~~~df~~~~k~~~~---f~~~~s~~~p~~~~~~f~~k~Y~P~ 378 (713)
.++++...+.++.||.+|||||||||+++ .+.+.+|+++||++++|+++. |+++ .+|. +|+|++|||.
T Consensus 5 ~~~~~~~~r~~~~~~~~~~~Gi~~~v~~~~~~~~~~~L~~~df~~~~k~~~~~~~f~~e---~~p~----~f~~k~Y~P~ 77 (392)
T 2gk9_A 5 VQQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRE---NLPS----HFKFKEYCPQ 77 (392)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGGCEEEEEEECSSSCCS---SSCS----SBEEEEESHH
T ss_pred ceeeeeecCcchHHHHHHHHhHHHHhhcccCCCCccccChhHhhhheEEeeccccCCcc---cCCC----ceEEEEECHH
Confidence 46677777788999999999999999988 345567999999999999874 4544 3443 7999999999
Q ss_pred HHHHHHHHcCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCeEEEEecCHHHHHHHHHHhHHhHHHH-cccCCcce
Q 005122 379 VFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHV-CQYKNTLV 457 (713)
Q Consensus 379 vF~~lR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~-~~~~~tLL 457 (713)
+|++||++|||+++||+.|||.+.+|. |+|||| +||+|.|+|||||||+++|+++|+++||.||+|| .+||+|||
T Consensus 78 ~F~~LR~~~~i~~~dy~~Sl~~~~~~~---s~GKSG-~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~TLL 153 (392)
T 2gk9_A 78 VFRNLRDRFGIDDQDYLVSLTRNPPSE---SEGSDG-RFLISYDRTLVIKEVSSEDIADMHSNLSNYHQYIVKCHGNTLL 153 (392)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHSSCCCC---CC------CCCCTTSSEEEEECCHHHHHHHHHHHHHHHHHHHHTTSCSSS
T ss_pred HHHHHHHHhCCCHHHHHHHhcCCCccc---CCCCcc-eEEEcCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhhCCCcch
Confidence 999999999999999999999888776 999999 9999999999999999999999999999999999 56999999
Q ss_pred eeeeeeEEEEecCCeEEEEEEEceeccCccceEEEEEecCCcccccCCCCccccccccccccccc---cceeccChHHHH
Q 005122 458 TKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDL---DFVFRLDRSWFQ 534 (713)
Q Consensus 458 ~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~---~~~~~l~~~~~~ 534 (713)
+||||||+|++.+ +++|||||+|||++...||++||||||+++|.+.+++ ..+..+||||+|| ...+.|++++++
T Consensus 154 ~k~~Gly~v~~~~-~~~~~vVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~~LkD~df~~~~~~i~l~~~~k~ 231 (392)
T 2gk9_A 154 PQFLGMYRVSVDN-EDSYMLVMRNMFSHRLPVHRKYDLKGSLVSREASDKE-KVKELPTLRDMDFLNKNQKVYIGEEEKK 231 (392)
T ss_dssp CCEEEEEECCBSS-CCCEEEEEECSSCSSSCCSCCCEECC------------------CCBTTC--CCCCCCCC----CH
T ss_pred hhhceEEEEEECC-eEEEEEEEecCCCCCcceeeeeeecccccCCccCccc-cccccceecccchhhcCCeEEECHHHHH
Confidence 9999999999865 7899999999999988999999999999999997754 3345689999999 457899999999
Q ss_pred HHHHHHHHHHHhhhcCCccccceeeEeeecCCCccccccC-CCCCCccCCCCcCCCcccccc-ccCCCCCchhhhcCCCC
Q 005122 535 ELIRQIDRDCEFLEAERIMDYSLLIGLHFRDDYSGDEMKM-SPNDKHCLDKRDSDIVGTFMR-GYHLLPDMDWVMEGRGP 612 (713)
Q Consensus 535 ~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~ 612 (713)
.|++||++||+||+++||||||||||||.++....+.... .+... ...++ ...+. +.. .+. ...+.
T Consensus 232 ~l~~~l~~D~~FL~~~~iMDYSLLvGi~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~---~~~-~~~t~-- 299 (392)
T 2gk9_A 232 IFLEKLKRDVEFLVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDE---SEVDG---DCSLTGPPA---LVG-SYGTS-- 299 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCEECCCBCC--------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCccceeEEeeecccccccccccccccccc---ccccc---ccccccccc---ccc-ccCCC--
Confidence 9999999999999999999999999999886543221000 00000 00000 00000 000 000 00000
Q ss_pred cccCCCCCccccccccccccccccCCCCCCCCCCCCCCCceeEEEEEEEeeeeecccchhhHHHHHhhhccCC-CCceee
Q 005122 613 HLRLGANTPARAQRVSKIEIDQFMGSGSNHSTPSQSGGEVFDVVLYFGIIDILQDYDISKKLEHAYKSLQVDP-SSISAV 691 (713)
Q Consensus 613 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyy~GIIDiLq~Y~~~KklE~~~Ks~~~~~-~~iS~v 691 (713)
+-..+..+++...... ..++..... .. +....+.+.++|||||||||||+||++|||||+||++++++ .+||||
T Consensus 300 ~~~~~~~~~~~~~~~~-~~~~~~~d~---~~-i~~~~~~~~~~iyylGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~iS~v 374 (392)
T 2gk9_A 300 PEGIGGYIHSHRPLGP-GEFESFIDV---YA-IRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKTVKHGAGAEISTV 374 (392)
T ss_dssp ------------------------------------------CBCCCEECCCC---------------------------
T ss_pred cccccccccccccccc-ccccccccc---cc-ccccccCCCceEEEEEEEEeeeeCChhHHHHHHHHHhccCCCCCCceE
Confidence 0000112221110000 000000000 00 11123455678999999999999999999999999999975 689999
Q ss_pred ChhhHHHHHHHHHHhhcc
Q 005122 692 DPKLYSKRFRDFIHRIFR 709 (713)
Q Consensus 692 ~P~~Y~~RF~~fi~~iF~ 709 (713)
+|++|++||++||.++|.
T Consensus 375 ~P~~Y~~RF~~fm~~~~~ 392 (392)
T 2gk9_A 375 HPEQYAKRFLDFITNIFA 392 (392)
T ss_dssp CHHHHHHHHHHHTC----
T ss_pred CHHHHHHHHHHHHHHhhC
Confidence 999999999999999984
No 3
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.94 E-value=1.6e-26 Score=244.87 Aligned_cols=131 Identities=19% Similarity=0.367 Sum_probs=87.4
Q ss_pred EcCCcEEEEEEECCEEeeeEEEEeCCCCEEEEEEeCCeeeeeeEEEeecCC-eecccccCCeeeeeeeEEecCCcEEEEE
Q 005122 77 WSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGD-TYRGSWSNDRKHGYGEKRYANGDVYRGS 155 (713)
Q Consensus 77 ~~dG~~YeG~w~~g~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~~G~-~Y~G~w~~g~~~G~G~~~~~nG~~YeG~ 155 (713)
|+||.+|+|+|++|++||.|+++|++|.+|+|+|++|++||.|+++++||. +|+|+|++|++||.|+++++||.+|+|+
T Consensus 2 ~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~~y~G~~~~g~~~G~G~~~~~~G~~y~G~ 81 (293)
T 1h3i_A 2 FFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGE 81 (293)
T ss_dssp CSSSCCCCEEEETTEEEEEEEEECTTSCEEEEEEETTEEEEEEEEECSSSCEEEEEEEETTEECSEEEEECTTSCEEEEE
T ss_pred cCCCCEEEEEEECCEeeEEEEEEECCCCEEEEEEECCEEEeCEEEEECCCCEEEEEEEECCEEEeeEEEEECCCCEEEEE
Confidence 455555555555555555555555555555555555555555555555555 5666666666666666667777777777
Q ss_pred Ee-CceEeee-EEEEEccCC-EEEEEEecCeEe-eeEEEE--ecCCCEEEEEEeCCee
Q 005122 156 WR-FNLMDGY-GKYAWSDGN-VYEGEWKNGVIF-GKGTLS--WNNGNRYEGCWDNGLP 207 (713)
Q Consensus 156 w~-~g~~~G~-G~~~~~nG~-~Y~G~w~~g~~~-G~G~~~--~~nG~~YeG~w~~G~~ 207 (713)
|+ +|++||. |+++++||. .|+|+|++|+++ |.|+++ ++||..+.|.|.+|..
T Consensus 82 ~~~~g~~~G~gG~~~~~~G~~~y~G~~~~g~~~~G~~~~~~~~~~g~~~~g~w~~g~~ 139 (293)
T 1h3i_A 82 VNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSV 139 (293)
T ss_dssp CCTTSCSCEEEEEEECTTSSEEEEEEEETTEEEEEEEEEEEECTTTSCEEEECSSCCE
T ss_pred EeECCeEeCCeEEEEECCCCEEEEEEEECCEEEccceEEEEecCCcceEEeEEcCCce
Confidence 77 7777777 777777777 477777777777 777777 6788888888765554
No 4
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.94 E-value=3.2e-26 Score=242.59 Aligned_cols=132 Identities=17% Similarity=0.208 Sum_probs=127.8
Q ss_pred EcCCCCEEEEEEECCeEeeeEEEEEcCCcEEEEEEECCEEeeeEEEEeCCCC-EEEEEEeCCeeeeeeEEEeecCCeecc
Q 005122 53 ILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGA-TYEGGFKSGRMDGEGTFVGVEGDTYRG 131 (713)
Q Consensus 53 ~~~nG~~Y~G~~~~g~~hG~G~~~~~dG~~YeG~w~~g~~~G~G~~~~~~G~-~YeG~f~~g~~~G~G~~~~~~G~~Y~G 131 (713)
+|+||++|+|+|.++++||.|+++|+||.+|+|+|++|++||.|+++|++|. +|+|+|++|++||.|+++++||.+|+|
T Consensus 1 ~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~~y~G~~~~g~~~G~G~~~~~~G~~y~G 80 (293)
T 1h3i_A 1 FFFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVG 80 (293)
T ss_dssp CCSSSCCCCEEEETTEEEEEEEEECTTSCEEEEEEETTEEEEEEEEECSSSCEEEEEEEETTEECSEEEEECTTSCEEEE
T ss_pred CcCCCCEEEEEEECCEeeEEEEEEECCCCEEEEEEECCEEEeCEEEEECCCCEEEEEEEECCEEEeeEEEEECCCCEEEE
Confidence 4799999999999999999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred ccc-CCeeeee-eeEEecCCc-EEEEEEeCceEe-eeEEEE--EccCCEEEEEEecCeE
Q 005122 132 SWS-NDRKHGY-GEKRYANGD-VYRGSWRFNLMD-GYGKYA--WSDGNVYEGEWKNGVI 184 (713)
Q Consensus 132 ~w~-~g~~~G~-G~~~~~nG~-~YeG~w~~g~~~-G~G~~~--~~nG~~Y~G~w~~g~~ 184 (713)
+|+ +|++||. |+++++||. +|+|.|++|+++ |.|+++ ++||..+.|.|.+++.
T Consensus 81 ~~~~~g~~~G~gG~~~~~~G~~~y~G~~~~g~~~~G~~~~~~~~~~g~~~~g~w~~g~~ 139 (293)
T 1h3i_A 81 EVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSV 139 (293)
T ss_dssp ECCTTSCSCEEEEEEECTTSSEEEEEEEETTEEEEEEEEEEEECTTTSCEEEECSSCCE
T ss_pred EEeECCeEeCCeEEEEECCCCEEEEEEEECCEEEccceEEEEecCCcceEEeEEcCCce
Confidence 999 9999999 999999999 699999999999 999998 8999999999987765
No 5
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.82 E-value=2e-09 Score=111.63 Aligned_cols=54 Identities=19% Similarity=0.265 Sum_probs=30.5
Q ss_pred EEEeCceEeeeEEEEEccCCEEEEEEe-cCeEeee-EEEEecCCCE-EEEEEeCCee
Q 005122 154 GSWRFNLMDGYGKYAWSDGNVYEGEWK-NGVIFGK-GTLSWNNGNR-YEGCWDNGLP 207 (713)
Q Consensus 154 G~w~~g~~~G~G~~~~~nG~~Y~G~w~-~g~~~G~-G~~~~~nG~~-YeG~w~~G~~ 207 (713)
|+|++|++||.|+++++||.+|+|+|. +|.+||. |+++|+||.+ |+|.|.+|.+
T Consensus 3 g~~~~~~~~G~g~~~~~dG~~y~G~~~~~~~~~G~~g~y~y~d~~~~~~G~~~~g~~ 59 (261)
T 2f69_A 3 MGYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEM 59 (261)
T ss_dssp --------CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEE
T ss_pred ceecCCceecceEEEeCCCCEEEEEEeeCCcCccceEEEEeCCCCEEEEEEEeCCcE
Confidence 566666666666666666666666666 6666666 6666666665 6666666655
No 6
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.81 E-value=2.1e-09 Score=111.47 Aligned_cols=56 Identities=20% Similarity=0.329 Sum_probs=43.9
Q ss_pred cccccCCeeeeeeeEEecCCcEEEEEEe-CceEeee-EEEEEccCCE-EEEEEecCeEe
Q 005122 130 RGSWSNDRKHGYGEKRYANGDVYRGSWR-FNLMDGY-GKYAWSDGNV-YEGEWKNGVIF 185 (713)
Q Consensus 130 ~G~w~~g~~~G~G~~~~~nG~~YeG~w~-~g~~~G~-G~~~~~nG~~-Y~G~w~~g~~~ 185 (713)
.|+|++|++||.|+++|+||++|+|+|. +|.++|. |+|+|+||.+ |+|+|++|.+.
T Consensus 2 ~g~~~~~~~~G~g~~~~~dG~~y~G~~~~~~~~~G~~g~y~y~d~~~~~~G~~~~g~~~ 60 (261)
T 2f69_A 2 AMGYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMI 60 (261)
T ss_dssp ---------CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEEE
T ss_pred CceecCCceecceEEEeCCCCEEEEEEeeCCcCccceEEEEeCCCCEEEEEEEeCCcEe
Confidence 3789999999999999999999999999 9999999 9999999999 99999998875
No 7
>2aqx_A Predicted: inositol 1,4,5-trisphosphate 3-kinase; IP3K, ITPKB, IP3-3K, IP3-3KB, IP3, calmodu binding, transferase; HET: ATP; 2.50A {Mus musculus}
Probab=80.89 E-value=2.5 Score=43.89 Aligned_cols=74 Identities=22% Similarity=0.342 Sum_probs=52.2
Q ss_pred cCCCCccceEEEeeCCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEceeccCcc
Q 005122 408 SSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEY 487 (713)
Q Consensus 408 ~s~GKSGs~F~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~ 487 (713)
.-.|-+|+ +...++..|+|-.+..|..+...+.+. .-..++|+|+|+..+ .+ ..||+|+||.+. .
T Consensus 19 QvaGH~g~--~~~~~~G~i~Kp~~~~E~~fYe~l~~~-------~L~~fvP~y~G~~~~--~~---~~~i~LEDLt~g-f 83 (289)
T 2aqx_A 19 QLAGHAGS--FKAAANGRILKKHCESEQRCLDRLMAD-------VLRPFVPAYHGDVVK--DG---ERYNQMDDLLAD-F 83 (289)
T ss_dssp CCSSCTTS--EEECSTTEEEEECCHHHHHHHHHHTTS-------TTGGGSCCEEEEEEE--TT---EEEEEEECTTTT-C
T ss_pred EeeCCCCc--ceECCCCEEEeeCcHHHHHHHHHHhhh-------hhHHhCchheEeecc--CC---ceEEEehhhhcC-C
Confidence 34566675 333445568999999999998887653 224689999998665 22 369999999764 2
Q ss_pred ceEEEEEec
Q 005122 488 RIHRRFDLK 496 (713)
Q Consensus 488 ~i~~~yDLK 496 (713)
.-...=|||
T Consensus 84 ~~PcVmDiK 92 (289)
T 2aqx_A 84 DSPCVMDCK 92 (289)
T ss_dssp SSCEEEEEE
T ss_pred CCceEEEEe
Confidence 344677888
No 8
>1w2f_A Inositol-trisphosphate 3-kinase A; inositol phosphate kinase, transferase, calmodulin-binding; 1.8A {Homo sapiens} SCOP: d.143.1.3 PDB: 1tzd_A* 1w2d_A* 1w2c_A*
Probab=74.98 E-value=4.5 Score=41.75 Aligned_cols=72 Identities=22% Similarity=0.320 Sum_probs=50.2
Q ss_pred CCccceEEEeeCCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEceeccCccceE
Q 005122 411 GKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIH 490 (713)
Q Consensus 411 GKSGs~F~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~i~ 490 (713)
|-.|.+... .|+..|+|-.+..|..+...+.++ .-..++|+|+|+..+ .+ ..||||+||.+. ..-.
T Consensus 8 GH~g~l~~~-~~~g~i~Kp~~~~E~~fY~~l~~~-------~L~~fvP~y~G~~~~--~~---~~~i~LEdLt~g-f~~P 73 (276)
T 1w2f_A 8 GHTGSFKAA-GTSGLILKRCSEPERYCLARLMAD-------ALRGCVPAFHGVVER--DG---ESYLQLQDLLDG-FDGP 73 (276)
T ss_dssp TCCSCCEEC-SSTTEEEEECCHHHHHHHHHHHTS-------GGGGGSCCEEEEEEE--TT---EEEEEEECTTTT-CSSC
T ss_pred CCCCceeec-CCCCEEEeeCCHHHHHHHHHhhhh-------hHHHhChhhheeecc--CC---ceEEEechHhcC-CCCc
Confidence 444543322 266789999999999998887643 223679999998654 22 379999999764 2344
Q ss_pred EEEEec
Q 005122 491 RRFDLK 496 (713)
Q Consensus 491 ~~yDLK 496 (713)
..=|||
T Consensus 74 cVmDiK 79 (276)
T 1w2f_A 74 CVLDCK 79 (276)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 578888
No 9
>2iew_A Inositol polyphosphate multikinase; ATP-grAsp fold related, transferase; 2.00A {Saccharomyces cerevisiae} PDB: 2if8_A*
Probab=73.04 E-value=4 Score=43.80 Aligned_cols=84 Identities=14% Similarity=0.199 Sum_probs=47.1
Q ss_pred CCCccceEEEeeCCeEEEEecCHHHHHHHHHHhHHhH------HHHcccCCcceeeeeeeEEEEecC-------------
Q 005122 410 PGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYY------QHVCQYKNTLVTKFFGVHCVKPVG------------- 470 (713)
Q Consensus 410 ~GKSGs~F~~t~D~rfiiKti~~~E~~~l~~~lp~Y~------~~~~~~~~tLL~k~~Gl~~i~~~~------------- 470 (713)
.|-.| ++...|+.+|+|-.+..|+.+...+...=+ ..+..--..++|+|+|+..+....
T Consensus 15 aGH~g--~l~~~dg~~i~Kp~~~~E~~FYe~l~~~~~~~~~~~~~~~~~L~~fvP~y~G~~~~~~~~~~~~~~~~~~~~~ 92 (363)
T 2iew_A 15 AGHDG--TLTDGDGLLIFKPAFPQELEFYKAIQVRDVSRRKSSADGDAPLCSWMPTYLGVLNEGAKIEQSGDAALLKIDE 92 (363)
T ss_dssp -------------CCEEEEECCHHHHHHHHHHC------------CCCCGGGGSCCEEEEEEC-----------------
T ss_pred cCCcc--eeEcCCCCEEeCcCChHHHHHHHHHhhhcccccccccccchhHHhhCcccceeEecccccccccchhhccccc
Confidence 45555 344468999999999999999877643200 000111246899999998875311
Q ss_pred ---------------Ce-EEEEEEEceeccCccceEEEEEec
Q 005122 471 ---------------GQ-KTRFIVMGNLFCSEYRIHRRFDLK 496 (713)
Q Consensus 471 ---------------~~-~~~fvVM~Nlf~~~~~i~~~yDLK 496 (713)
+. ...||||+||-+. ..-..+=|||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~i~LEdLt~g-f~~PcVlDiK 133 (363)
T 2iew_A 93 RLSDSTDNLDSIPVKSEKSKQYLVLENLLYG-FSKPNILDIK 133 (363)
T ss_dssp ------------------CCEEEEEECTTTT-CSSEEEEEEE
T ss_pred ccccCccchhcccccCCCCccEEEechhhcC-CCCceEEEEE
Confidence 00 3479999999864 3445678888
No 10
>2a98_A Inositol 1,4,5-trisphosphate 3-kinase C; structural genomics, structural genomics consortium, SGC, transferase; HET: I3P; 2.60A {Homo sapiens}
Probab=72.52 E-value=4.4 Score=41.44 Aligned_cols=62 Identities=19% Similarity=0.326 Sum_probs=46.0
Q ss_pred CCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEceeccCccceEEEEEec
Q 005122 422 DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLK 496 (713)
Q Consensus 422 D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLK 496 (713)
|+..|+|-.+..|..+...+.+. .-..++|+|+|+... .+ ..||||+||.+. ..-...=|||
T Consensus 1 ~~g~i~K~~~~~E~~fY~~l~~~-------~L~~fvP~y~G~~~~--~~---~~~i~LEdLt~g-~~~PcVmDiK 62 (259)
T 2a98_A 1 EDGRILKRFCQCEQRSLEQLMKD-------PLRPFVPAYYGMVLQ--DG---QTFNQMEDLLAD-FEGPSIMDCK 62 (259)
T ss_dssp CCSEEEEECCHHHHHHHHHHTTS-------TTGGGSCCEEEEEEE--TT---EEEEEEECTTTT-CSSCEEEEEE
T ss_pred CCCEEeccCCHHHHHHHHHhhhh-------hHHHhCcCceEEEEE--CC---ceEEEeehHhcC-CCCceEEEEE
Confidence 35689999999999998887642 234689999998653 22 379999999764 2344578888
No 11
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=55.33 E-value=1.9 Score=46.92 Aligned_cols=6 Identities=17% Similarity=0.290 Sum_probs=0.0
Q ss_pred EEcCCC
Q 005122 52 KILPNG 57 (713)
Q Consensus 52 ~~~~nG 57 (713)
....+|
T Consensus 433 ~~~~~~ 438 (449)
T 3iot_A 433 YQITAG 438 (449)
T ss_dssp ------
T ss_pred cccCCC
Confidence 334444
No 12
>3ts3_A Capsid polyprotein; virus protein, projection domain, astrovirus capsid, viral P; 1.49A {Turkey astrovirus 2}
Probab=50.38 E-value=3.9 Score=38.53 Aligned_cols=39 Identities=18% Similarity=0.560 Sum_probs=28.6
Q ss_pred HHHHHcCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCeEEEE
Q 005122 382 HLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIK 428 (713)
Q Consensus 382 ~lR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~t~D~rfiiK 428 (713)
.|..+.++.+-|=..|+. .+.|+-+++||.|.|+||||=
T Consensus 130 ~lk~r~nl~egDpvismg--------dt~Grraalfyrtsder~ill 168 (208)
T 3ts3_A 130 QLKQRLNLAEGDPVISMG--------DTNGRRAALFYRTSDEKYILF 168 (208)
T ss_dssp HHHHHHCCCTTCEEEEEE--------ETTCCEEEEEEETTTTEEEEE
T ss_pred hhhhhhccccCCceeeec--------ccCCceeeeeeeccCceEEEE
Confidence 466666666654444443 367999999999999999985
No 13
>4frf_A Inositol polyphosphate multikinase alpha; ATP grAsp, inositol phosphate kinase, transferase; 2.90A {Arabidopsis thaliana}
Probab=41.17 E-value=8.7 Score=39.47 Aligned_cols=74 Identities=20% Similarity=0.367 Sum_probs=29.5
Q ss_pred CCCCccceEEEeeCCeEEEEecCH-----HHHHHHHHHhHHhHHHHcccC------CcceeeeeeeEEEEecCCeEEEEE
Q 005122 409 SPGKSGSFFYLTQDDRFMIKTVKK-----SEVKVLIRMLPSYYQHVCQYK------NTLVTKFFGVHCVKPVGGQKTRFI 477 (713)
Q Consensus 409 s~GKSGs~F~~t~D~rfiiKti~~-----~E~~~l~~~lp~Y~~~~~~~~------~tLL~k~~Gl~~i~~~~~~~~~fv 477 (713)
..|+.|.+ ...++ .|+|=+.. .|+.+-.++ ..++ ..++|+|+|...+... ....||
T Consensus 5 ~~Gh~G~l--~~~~G-~v~KP~~~~~rg~~E~~FYe~l--------~~~~~~~~~L~~fvP~y~G~~~~~~~--~~~~~i 71 (275)
T 4frf_A 5 KDGKPGPL--VDDKG-RFFKPLQGDSRGEIEVKFYESF--------SSNTEVPEHIHRYFPVYHGTQAVEGS--DGAAMM 71 (275)
T ss_dssp ----------------------------CCHHHHHHHH--------HHCTTSCHHHHTTSCCBCCC------------CC
T ss_pred CCCCCCce--ECCCC-cEEeecCCCCcchHHHHHHHHH--------hhCCCchHHHHhhCcCCceeEEecCC--CCccEE
Confidence 45777764 33445 57898865 588876554 2222 1348999998877532 345799
Q ss_pred EEceeccCccceEEEEEec
Q 005122 478 VMGNLFCSEYRIHRRFDLK 496 (713)
Q Consensus 478 VM~Nlf~~~~~i~~~yDLK 496 (713)
||+||-+. ..-...=|||
T Consensus 72 ~LEdLt~g-f~~PcVlDiK 89 (275)
T 4frf_A 72 VLENLLAE-YTKPSVMDVK 89 (275)
T ss_dssp CBCCGGGG-CSSEEEEEEE
T ss_pred EEeecccc-cCCCceeEee
Confidence 99999764 3444567888
No 14
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=37.86 E-value=78 Score=31.17 Aligned_cols=74 Identities=12% Similarity=0.178 Sum_probs=45.1
Q ss_pred cccCCCCccceEEEeeC-CeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEcee
Q 005122 406 ELSSPGKSGSFFYLTQD-DRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (713)
Q Consensus 406 ~~~s~GKSGs~F~~t~D-~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nl 482 (713)
+....|..|..|--+.+ ..+.||.++..+...+..-..-+-.-...||| +++++|.+...... ....++||+-+
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~n--iv~~~~~~~~~~~~-~~~~~lv~e~~ 88 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHEN--ILGFIASDMTSRHS-STQLWLITHYH 88 (301)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTT--BCCEEEEEEEEETT-EEEEEEEECCC
T ss_pred EeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcC--eeeEEEeeccccCC-CceeEEehhhc
Confidence 33455777887765544 45889999887665554422222111135665 67888876654333 56678899864
No 15
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=36.33 E-value=53 Score=33.20 Aligned_cols=73 Identities=14% Similarity=0.181 Sum_probs=44.6
Q ss_pred cCCCCccceEEEee-CCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEcee
Q 005122 408 SSPGKSGSFFYLTQ-DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (713)
Q Consensus 408 ~s~GKSGs~F~~t~-D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nl 482 (713)
...|..|.+|--+. +..+.||.++......+..-..-+......||| ++++++.+......+...+++||+.+
T Consensus 21 lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~--i~~~~~~~~~~~~~~~~~~~lv~e~~ 94 (336)
T 3g2f_A 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDN--IARFIVGDERVTADGRMEYLLVMEYY 94 (336)
T ss_dssp EEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTT--BCCEEEEEEEECTTSCEEEEEEECCC
T ss_pred cccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcc--hhhheecccccccCCCceEEEEEecC
Confidence 34577787776554 456899999866555444321111111234444 67888877665555567788999975
No 16
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=36.17 E-value=57 Score=33.29 Aligned_cols=110 Identities=14% Similarity=0.142 Sum_probs=64.2
Q ss_pred cccccCCCCccceEEEeeCC-eEEEEecCHHHHHHHHHHhHHhHHHH--cccCCcceeeeeeeEEEEecCCeEEEEEEEc
Q 005122 404 LRELSSPGKSGSFFYLTQDD-RFMIKTVKKSEVKVLIRMLPSYYQHV--CQYKNTLVTKFFGVHCVKPVGGQKTRFIVMG 480 (713)
Q Consensus 404 l~~~~s~GKSGs~F~~t~D~-rfiiKti~~~E~~~l~~~lp~Y~~~~--~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~ 480 (713)
|.+....|..|..|--..++ .+-||.++..+.+.+..-.. ..-+ .+||| +++++|.+.-. .......++||+
T Consensus 7 L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~E--i~~~~~l~HpN--Iv~l~g~~~~~-~~~~~~~~lV~E 81 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAE--IYQTVMLRHEN--ILGFIAADNKD-NGTWTQLWLVSD 81 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHH--HHTSTTCCCTT--BCCEEEEEEEE-CSSSEEEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHH--HHHHhcCCCCC--CCcEEEEEEec-CCCceEEEEEec
Confidence 34444567888888655555 46799998877655443211 1111 25676 78899977654 222456789999
Q ss_pred eeccCccceEEEEEecCCcccccCCCCccccccccccccccccceeccChHHHHHHHHHHHHHHHhhhcC
Q 005122 481 NLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIRQIDRDCEFLEAE 550 (713)
Q Consensus 481 Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~ 550 (713)
-+=...+ ... |+. -.+..+.+..+..|+.+=.++|.+.
T Consensus 82 y~~~gsL------------~~~--------------l~~------~~l~~~~~~~i~~~ia~gl~ylH~~ 119 (303)
T 3hmm_A 82 YHEHGSL------------FDY--------------LNR------YTVTVEGMIKLALSTASGLAHLHME 119 (303)
T ss_dssp CCTTCBH------------HHH--------------HHH------CCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCcH------------HHH--------------HHh------CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 7643221 100 000 0133445556778888888898875
No 17
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=34.64 E-value=2e+02 Score=29.45 Aligned_cols=115 Identities=18% Similarity=0.250 Sum_probs=66.7
Q ss_pred ccCCCCccceEEEee--------CCeEEEEecCHH------HHHHHHHHhHH-h---HHHHcccCCcceeeeeeeEEEEe
Q 005122 407 LSSPGKSGSFFYLTQ--------DDRFMIKTVKKS------EVKVLIRMLPS-Y---YQHVCQYKNTLVTKFFGVHCVKP 468 (713)
Q Consensus 407 ~~s~GKSGs~F~~t~--------D~rfiiKti~~~------E~~~l~~~lp~-Y---~~~~~~~~~tLL~k~~Gl~~i~~ 468 (713)
....|..|.+|--.. ...+.||.+... |++.+.++... . +..+..-.+--+++++|.+....
T Consensus 42 ~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~ 121 (364)
T 3op5_A 42 PIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDK 121 (364)
T ss_dssp ECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEE
T ss_pred EEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeecc
Confidence 345677787776543 357899998754 45555543321 1 11222223444789999887654
Q ss_pred cCCeEEEEEEEceeccCccceEEEEEecCCcccccCCCCccccccccccccccccceeccChHHHHHHHHHHHHHHHhhh
Q 005122 469 VGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIRQIDRDCEFLE 548 (713)
Q Consensus 469 ~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~~~~~l~~~~~~~l~~ql~~D~~FL~ 548 (713)
. +....++||+.+ ...+. .. ++.. .-.+.......++.||-.=.++|.
T Consensus 122 ~-~~~~~~lv~e~~-g~~L~--~~------------------------~~~~----~~~l~~~~~~~i~~qi~~~l~~lH 169 (364)
T 3op5_A 122 N-GKSYRFMIMDRF-GSDLQ--KI------------------------YEAN----AKRFSRKTVLQLSLRILDILEYIH 169 (364)
T ss_dssp T-TEEEEEEEEECE-EEEHH--HH------------------------HHHT----TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred C-CcceEEEEEeCC-CCCHH--HH------------------------HHhc----cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4 367789999987 43210 00 0000 001344556678888888889999
Q ss_pred cCCcc
Q 005122 549 AERIM 553 (713)
Q Consensus 549 ~~~im 553 (713)
+.+|+
T Consensus 170 ~~~ii 174 (364)
T 3op5_A 170 EHEYV 174 (364)
T ss_dssp HTTEE
T ss_pred HCCeE
Confidence 98764
No 18
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=31.27 E-value=2.3e+02 Score=28.70 Aligned_cols=114 Identities=18% Similarity=0.221 Sum_probs=63.0
Q ss_pred ccCCCCccceEEEe------eCCeEEEEecCH------HHHHHHHHHhH----HhHHHHcccCCcceeeeeeeEEEEecC
Q 005122 407 LSSPGKSGSFFYLT------QDDRFMIKTVKK------SEVKVLIRMLP----SYYQHVCQYKNTLVTKFFGVHCVKPVG 470 (713)
Q Consensus 407 ~~s~GKSGs~F~~t------~D~rfiiKti~~------~E~~~l~~~lp----~Y~~~~~~~~~tLL~k~~Gl~~i~~~~ 470 (713)
....|..|..|-.. ....++||.+.+ .|.+.+.++.. .-+..+..-.+.-+++++|.+.....+
T Consensus 44 ~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~ 123 (345)
T 2v62_A 44 KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKG 123 (345)
T ss_dssp EC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSS
T ss_pred eEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccCC
Confidence 34456677776554 345789999865 35555554322 112223322334478999988775433
Q ss_pred CeEEEEEEEceeccCccceEEEEEecCCcccccCCCCccccccccccccccccceeccChHHHHHHHHHHHHHHHhhhcC
Q 005122 471 GQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIRQIDRDCEFLEAE 550 (713)
Q Consensus 471 ~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~ 550 (713)
....++||+.+ ...+. |+ ++.. . .+.......++.||-.=.++|.+.
T Consensus 124 -~~~~~lv~e~~-~~~L~-----~~---------------------l~~~---~--~~~~~~~~~i~~qi~~aL~~LH~~ 170 (345)
T 2v62_A 124 -RSYRFMVMERL-GIDLQ-----KI---------------------SGQN---G--TFKKSTVLQLGIRMLDVLEYIHEN 170 (345)
T ss_dssp -CEEEEEEEECE-EEEHH-----HH---------------------CBGG---G--BCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CcEEEEEEecc-CCCHH-----HH---------------------HHhc---C--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 56788999987 32210 00 0000 0 234556667888888889999998
Q ss_pred Ccc
Q 005122 551 RIM 553 (713)
Q Consensus 551 ~im 553 (713)
+|+
T Consensus 171 ~iv 173 (345)
T 2v62_A 171 EYV 173 (345)
T ss_dssp TEE
T ss_pred Cee
Confidence 864
No 19
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=27.21 E-value=80 Score=31.06 Aligned_cols=74 Identities=12% Similarity=0.100 Sum_probs=41.5
Q ss_pred ccCCCCccceEEEee-CCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEceec
Q 005122 407 LSSPGKSGSFFYLTQ-DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLF 483 (713)
Q Consensus 407 ~~s~GKSGs~F~~t~-D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf 483 (713)
....|..|..|--.. ...+.||.+++.+...+.+-..-+-.-...||| +++++|.+..... .....++||+.+-
T Consensus 10 ~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~--i~~~~~~~~~~~~-~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 10 SIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN--ILGFIAADNKDNG-TWTQLWLVSDYHE 84 (303)
T ss_dssp EEEECSSSEEEEC-CTTSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-C--BCCEEEEEEEECS-SSEEEEEEEECCT
T ss_pred hccCCCCeEEEEEEEcCcceEEEEecccchhhHHHHHHHHHHHhccCcc--eeeeeeecccCCC-ccceeEEEEeccC
Confidence 344577777765443 456999999987766544322111111134554 6788887765432 2346788998754
No 20
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=26.74 E-value=93 Score=31.09 Aligned_cols=113 Identities=9% Similarity=0.062 Sum_probs=63.1
Q ss_pred cCCCCccceEEEee---CCeEEEEecCHHHHHHHHHHhHHhH--HHHcccCCcceeeeeeeEEEEec---CCeEEEEEEE
Q 005122 408 SSPGKSGSFFYLTQ---DDRFMIKTVKKSEVKVLIRMLPSYY--QHVCQYKNTLVTKFFGVHCVKPV---GGQKTRFIVM 479 (713)
Q Consensus 408 ~s~GKSGs~F~~t~---D~rfiiKti~~~E~~~l~~~lp~Y~--~~~~~~~~tLL~k~~Gl~~i~~~---~~~~~~fvVM 479 (713)
...|..|..|-... ...++||.+.+.+......++.... ..+..|| -+++++|++.+... ......+|||
T Consensus 36 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~--~iv~~~~~~~~~~~~~~~~~~~~~lv~ 113 (337)
T 3ll6_A 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHP--NIVQFCSAASIGKEESDTGQAEFLLLT 113 (337)
T ss_dssp EECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTST--TBCCEEEEEEECTTTSTTSSEEEEEEE
T ss_pred EccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCC--ChhhccccccccccccccCCceEEEEE
Confidence 44577787776553 4579999985444333333333322 2233455 47889998877532 3366788888
Q ss_pred ceeccCccceEEEEEecCCcccccCCCCccccccccccccccccceeccChHHHHHHHHHHHHHHHhhhcCC
Q 005122 480 GNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIRQIDRDCEFLEAER 551 (713)
Q Consensus 480 ~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~ 551 (713)
+-+-.+ |.--.. +.. ..-.+.......++.||-.=..+|.+.+
T Consensus 114 e~~~g~---------L~~~l~-~~~-------------------~~~~~~~~~~~~i~~qi~~~l~~LH~~~ 156 (337)
T 3ll6_A 114 ELCKGQ---------LVEFLK-KME-------------------SRGPLSCDTVLKIFYQTCRAVQHMHRQK 156 (337)
T ss_dssp ECCSEE---------HHHHHH-HHH-------------------TTCSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred EecCCC---------HHHHHH-Hhh-------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 865211 100000 000 0001334455667888888888999887
No 21
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=24.47 E-value=1.6e+02 Score=33.49 Aligned_cols=111 Identities=14% Similarity=0.095 Sum_probs=60.3
Q ss_pred cCCCCccceEEEee----CCeEEEEecCHHHHHHHHHHhHHhHHHHc--ccCCcceeeeeeeEEEEecCCeEEEEEEEce
Q 005122 408 SSPGKSGSFFYLTQ----DDRFMIKTVKKSEVKVLIRMLPSYYQHVC--QYKNTLVTKFFGVHCVKPVGGQKTRFIVMGN 481 (713)
Q Consensus 408 ~s~GKSGs~F~~t~----D~rfiiKti~~~E~~~l~~~lp~Y~~~~~--~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N 481 (713)
...|..|.+|--.. +..++||.+...........+..=...+. .||| |+++++++...-..+....+|||+.
T Consensus 88 lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~~~~~~~~~~~~~~~~~~lv~E~ 165 (681)
T 2pzi_A 88 IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPS--IVQIFNFVEHTDRHGDPVGYIVMEY 165 (681)
T ss_dssp EEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTT--BCCEEEEEEEECTTSCEEEEEEEEC
T ss_pred EeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCC--cCeEeeeEeecCCCCCceeEEEEEe
Confidence 34466677765532 34589998854211111111111111222 3555 8899998877654456677999997
Q ss_pred eccCccceEEEEEecCCcccccCCCCccccccccccccccccceeccChHHHHHHHHHHHHHHHhhhcCCcc
Q 005122 482 LFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIRQIDRDCEFLEAERIM 553 (713)
Q Consensus 482 lf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~im 553 (713)
+-... |+- . ++ . .+.......++.||-.=.++|.+.+|+
T Consensus 166 ~~g~~--------L~~-----~-------------~~-----~--~l~~~~~~~~~~qi~~aL~~lH~~gii 204 (681)
T 2pzi_A 166 VGGQS--------LKR-----S-------------KG-----Q--KLPVAEAIAYLLEILPALSYLHSIGLV 204 (681)
T ss_dssp CCCEE--------CC---------------------------C--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCCc--------HHH-----H-------------Hh-----C--CCCHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 64321 100 0 00 0 133445556777887778888887754
No 22
>3ipq_A Oxysterols receptor LXR-alpha; LXR homodimer, LXR signaling, alternative DNA-binding, metal-binding, nucleus, polymorphism, receptor transcription; HET: 965; 2.00A {Homo sapiens} PDB: 3ips_A* 3ipu_A* 3fc6_B* 3fal_B* 1uhl_B* 2acl_B* 1upv_A* 1upw_A* 1p8d_A* 1pq9_A* 1pq6_A* 1pqc_A* 3kfc_A* 4dk7_A* 4dk8_A* 3l0e_A*
Probab=23.39 E-value=17 Score=37.13 Aligned_cols=7 Identities=14% Similarity=0.681 Sum_probs=3.9
Q ss_pred CCChHHH
Q 005122 388 AIDPADY 394 (713)
Q Consensus 388 ~i~~~~y 394 (713)
+||.++|
T Consensus 186 ~ld~~E~ 192 (283)
T 3ipq_A 186 QLNDAEF 192 (283)
T ss_dssp TCCHHHH
T ss_pred cCCHHHH
Confidence 4555555
No 23
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=23.04 E-value=1.8e+02 Score=28.46 Aligned_cols=112 Identities=13% Similarity=0.114 Sum_probs=56.6
Q ss_pred CCCCccceEEEe-------eCCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEce
Q 005122 409 SPGKSGSFFYLT-------QDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGN 481 (713)
Q Consensus 409 s~GKSGs~F~~t-------~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N 481 (713)
..|..|..|... ....++||.+.........+-+..=..-+..-.+.-+++++|++... +....++||+.
T Consensus 30 g~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~~~lv~e~ 106 (302)
T 4e5w_A 30 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GGNGIKLIMEF 106 (302)
T ss_dssp EECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------CCEEEEEEC
T ss_pred CCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CCceEEEEEEe
Confidence 457778887655 46779999998653211111111111222222234477888876643 12346788886
Q ss_pred eccCccceEEEEEecCCcccccCCCCccccccccccccccccceeccChHHHHHHHHHHHHHHHhhhcCCcc
Q 005122 482 LFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIRQIDRDCEFLEAERIM 553 (713)
Q Consensus 482 lf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~im 553 (713)
+-... .... ++. ..-.+.......++.||-.=.++|.+.+|+
T Consensus 107 ~~~~~------------L~~~--------------l~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 148 (302)
T 4e5w_A 107 LPSGS------------LKEY--------------LPK----NKNKINLKQQLKYAVQICKGMDYLGSRQYV 148 (302)
T ss_dssp CTTCB------------HHHH--------------HHH----HTTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCCc------------HHHH--------------HHh----ccccCCHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 53211 0000 000 000134455566788888888899988754
No 24
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=21.91 E-value=2.4e+02 Score=28.87 Aligned_cols=105 Identities=16% Similarity=0.177 Sum_probs=62.3
Q ss_pred ccCCCCccceEEEeeCCeEEEEecC-----HHHHHHHHHHhHHhHHHH--cccCCcceeeeeeeEEEEecCCeEEEEEEE
Q 005122 407 LSSPGKSGSFFYLTQDDRFMIKTVK-----KSEVKVLIRMLPSYYQHV--CQYKNTLVTKFFGVHCVKPVGGQKTRFIVM 479 (713)
Q Consensus 407 ~~s~GKSGs~F~~t~D~rfiiKti~-----~~E~~~l~~~lp~Y~~~~--~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM 479 (713)
....|..|.+|--...+...||.++ .++.+.|++ . ..-+ .+||| |++++|.. . .+ . .+|||
T Consensus 43 ~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~---E-~~il~~l~HpN--IV~l~g~~-~--~~--~-~~iVm 110 (307)
T 3omv_A 43 RIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRN---E-VAVLRKTRHVN--ILLFMGYM-T--KD--N-LAIVT 110 (307)
T ss_dssp ECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHH---H-HHHHTTCCCTT--BCCEEEEE-C--SS--S-CEEEE
T ss_pred EEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHH---H-HHHHHhCCCCC--EeeEEEEE-E--CC--e-EEEEE
Confidence 3456888999888888889999985 233333332 1 1112 25776 66899953 2 22 1 57899
Q ss_pred ceeccCccceEEEEEecCCcccccCCCCccccccccccccccccceeccChHHHHHHHHHHHHHHHhhhcCCcc
Q 005122 480 GNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIRQIDRDCEFLEAERIM 553 (713)
Q Consensus 480 ~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~im 553 (713)
+-+=.. |....-.. ..-.+....+..++.||..=.+||.+.+|+
T Consensus 111 Ey~~gG------------sL~~~l~~------------------~~~~l~~~~~~~i~~qia~gL~yLH~~~Ii 154 (307)
T 3omv_A 111 QWCEGS------------SLYKHLHV------------------QETKFQMFQLIDIARQTAQGMDYLHAKNII 154 (307)
T ss_dssp ECCSSC------------BHHHHHHT------------------SCCCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred EcCCCC------------CHHHHHhh------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 865322 11111000 001234455667889999999999998873
No 25
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=20.75 E-value=2.3e+02 Score=29.73 Aligned_cols=65 Identities=23% Similarity=0.323 Sum_probs=40.3
Q ss_pred cCCCCccceEEEee---CCeEEEEecCHH-----HHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEE
Q 005122 408 SSPGKSGSFFYLTQ---DDRFMIKTVKKS-----EVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVM 479 (713)
Q Consensus 408 ~s~GKSGs~F~~t~---D~rfiiKti~~~-----E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM 479 (713)
...|..|.++.... ...+.||.+.+. |+..+.+ +..||| +++++++|.....+ ....++||
T Consensus 70 LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~--------~~~hp~--iv~l~~~~~~~~~~-~~~~~lv~ 138 (400)
T 1nxk_A 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR--------ASQCPH--IVRIVDVYENLYAG-RKCLLIVM 138 (400)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHH--------HTTSTT--BCCEEEEEEEEETT-EEEEEEEE
T ss_pred eeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHH--------hcCCCC--cceEeEEEeecccC-CcEEEEEE
Confidence 34566777776543 346999999642 2222222 234554 78899988765443 56678999
Q ss_pred ceec
Q 005122 480 GNLF 483 (713)
Q Consensus 480 ~Nlf 483 (713)
+.+=
T Consensus 139 E~~~ 142 (400)
T 1nxk_A 139 ECLD 142 (400)
T ss_dssp ECCC
T ss_pred EeCC
Confidence 8753
No 26
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=20.21 E-value=1.9e+02 Score=29.08 Aligned_cols=108 Identities=9% Similarity=0.093 Sum_probs=60.4
Q ss_pred cCCCCccceEEEee-CCeEEEEecCHHHHHHHHHHhHHhHHHHcccCCcceeeeeeeEEEEecCCeEEEEEEEceeccCc
Q 005122 408 SSPGKSGSFFYLTQ-DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSE 486 (713)
Q Consensus 408 ~s~GKSGs~F~~t~-D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~ 486 (713)
...|..|..|--.. +..+.||.++..+......... ..-+..-.+.-|++++|.+.-.... ....++||+-+-...
T Consensus 32 lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E--~~~l~~l~hpniv~~~~~~~~~~~~-~~~~~lv~e~~~~g~ 108 (322)
T 3soc_A 32 KARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYE--VYSLPGMKHENILQFIGAEKRGTSV-DVDLWLITAFHEKGS 108 (322)
T ss_dssp EECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHH--HHTSTTCCCTTBCCEEEEEEEECSS-SEEEEEEEECCTTCB
T ss_pred ecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHH--HHHHhcCCCCCchhhcceeccCCCC-CceEEEEEecCCCCC
Confidence 44577788776654 4558899997665443332211 1112222233488999987764322 355688998653211
Q ss_pred cceEEEEEecCCcccccCCCCccccccccccccccccceeccChHHHHHHHHHHHHHHHhhhcC
Q 005122 487 YRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIRQIDRDCEFLEAE 550 (713)
Q Consensus 487 ~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lkDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~ 550 (713)
+ .. .++.. .+.......++.||-.=.+||.+.
T Consensus 109 L------------~~--------------~l~~~------~~~~~~~~~i~~qi~~al~~LH~~ 140 (322)
T 3soc_A 109 L------------SD--------------FLKAN------VVSWNELCHIAETMARGLAYLHED 140 (322)
T ss_dssp H------------HH--------------HHHHC------CBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred H------------HH--------------HHHhc------CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 1 00 00000 133455566788888888899876
Done!