BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005123
(713 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NLV4|FY_ARATH Flowering time control protein FY OS=Arabidopsis thaliana GN=FY
PE=1 SV=1
Length = 647
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/680 (68%), Positives = 505/680 (74%), Gaps = 70/680 (10%)
Query: 17 GGGDHFNRGPQPPQPPGPPMMRQPSASSSTLNPPEFHHLPSNPPYDAHGDSFAAKRMRKL 76
GGD +RG Q PQPP MMRQ SASS+ +NP ++HH PS P +D + DSF AKRMRK
Sbjct: 3 AGGD-MHRGSQMPQPP---MMRQSSASSTNINP-DYHH-PSGP-FDPNVDSFGAKRMRKH 55
Query: 77 TQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSFAAKFV 136
TQRRAVDYTSTVVRY+Q R WQRDSRDRT LQ TPAAA+DMLPTVAY+DNPSTSFAAKFV
Sbjct: 56 TQRRAVDYTSTVVRYIQARTWQRDSRDRTTLQPTPAAAVDMLPTVAYSDNPSTSFAAKFV 115
Query: 137 HTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSH 196
H SLNKNRCSINRVLWTP+GRRLITGSQSGEFTLWNGQSFNFEMILQAHD IRSMVWSH
Sbjct: 116 HASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSH 175
Query: 197 NDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWD 256
N+N+MVSGDDGG +KYWQNNMNNVKANK+AHKES+RDLSFC+TDLKFCSCSDDTTVKVWD
Sbjct: 176 NENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWD 235
Query: 257 FARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVL 316
F +C +E SLTGHGWDVKSVDWHPTKSLLVSGGKD LVKLWD +SGRELCS HGHKN+VL
Sbjct: 236 FTKCVDESSLTGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVL 295
Query: 317 CVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLD 376
VKWNQNGNW+LTASKDQIIKLYDIR MKEL+SFRGH KDVT+LAWHP HEEYFVSGS D
Sbjct: 296 SVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSD 355
Query: 377 GSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTKFWCRNRPGDTARD 434
GSI HW+VGHE PQ+EI N HDN+VWDLAWHPIGYLLC SNDHTTKFWCRNRP D RD
Sbjct: 356 GSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPADNPRD 415
Query: 435 KFNMGQNQGYGEQNAVFAGRMPGNFPLPEGPTTPGPFAPGLTRNEGTIPGVGVAMPLSIP 494
+ QNQGY EQ GR P NF E PG F PGLTRNEGTIPG+G+AMP
Sbjct: 416 V--LMQNQGYNEQG---FGRQPDNFQPSEASPIPGAFVPGLTRNEGTIPGIGIAMP---- 466
Query: 495 SFDSSAQGEQKQPLSMPLGAPPLPPGPHPSLLTANQQQGYQQNPPPMPPQQHQGHPQQMP 554
FD+S+QG+ KQPL + P G Q QQHQGHPQQM
Sbjct: 467 -FDASSQGDHKQPLPGSMALGAPP----LPPGPHPSLLGSGQQQGYQQQQQHQGHPQQM- 520
Query: 555 HLAMPPQNMP--QLQPPSHLPMLQHPHISRPPPQMPQLGMPSPM---PGSLPTPSSHPMS 609
L MP NMP QL P SH+P+ HPH +P PM P P S PMS
Sbjct: 521 -LPMP--NMPHHQLPPSSHMPL--HPH-----------HLPRPMQMPPHGHMPPPSMPMS 564
Query: 610 --MPVPVGMQGSMNQMAPPMQQGHYMGMNPMHSGGGAPPQVGGFPNGMQGPPNSSGPQMY 667
MP +GMQG MN P M Q H+M GAP V QG PNS GPQMY
Sbjct: 565 HQMPGSMGMQGGMN---PQMSQSHFM---------GAPSGV------FQGQPNSGGPQMY 606
Query: 668 PQG-GAFNRPQGQMPMMPGY 686
PQG G FNRPQ M+PGY
Sbjct: 607 PQGRGGFNRPQ----MIPGY 622
>sp|Q9C0J8|WDR33_HUMAN pre-mRNA 3' end processing protein WDR33 OS=Homo sapiens GN=WDR33
PE=1 SV=2
Length = 1336
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 266/627 (42%), Positives = 353/627 (56%), Gaps = 52/627 (8%)
Query: 67 SFAAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDN 126
+F KRMRK R+ +DY +V++Y++ R+WQRD RD +Q D++P + +N
Sbjct: 42 TFDGKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNN 101
Query: 127 PSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHD 186
P + KFV TS NK +C + V WTP GRRL+TG+ SGEFTLWNG +FNFE ILQAHD
Sbjct: 102 PMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHD 161
Query: 187 HAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSC 246
+R+M WSHND WM++ D GG +KYWQ+NMNNVK + AHKE++R+ SF TD KF +C
Sbjct: 162 SPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQ-AHKEAIREASFSPTDNKFATC 220
Query: 247 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSL--VKLWDAKSGRE 304
SDD TV++WDF RC EER L GHG DVK VDWHPTK L+VSG KDS +K WD K+G+
Sbjct: 221 SDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQS 280
Query: 305 LCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMK-ELESFRGHRKDVTALAWH 363
L + H HKN V+ VK N NGNW+LTAS+D + KL+DIR +K EL+ FRGH+K+ TA+AWH
Sbjct: 281 LATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH 340
Query: 364 PFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTK 421
P HE F SG DGS+ W VG E + H+ +W LAWHP+G++LC SNDHT+K
Sbjct: 341 PVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSK 400
Query: 422 FWCRNRPGDTARDKFNMGQNQGYGEQNAVFAGRMPGNFPLPEGPTTPGPFAPGLTRN--- 478
FW RNRPGD RD++N+ G E + P + + G P + +
Sbjct: 401 FWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMG 460
Query: 479 -------EGTIPGVGVAMPLSIPSFDSSAQGEQKQPLSMPLGAPPLPPGPHPSLLTANQQ 531
E TIPG+ M + D ++K P + P + A Q
Sbjct: 461 KDESNEIEMTIPGLDWGM-EEVMQKDQKKVPQKKVPYAKP--------------IPAQFQ 505
Query: 532 QGYQQNPPPMPP--------QQHQGHPQQMPHLAMPPQNMPQLQPPSHLPMLQHPHISRP 583
Q + QN P+P ++ ++ A Q M LQ ++ +L+ I R
Sbjct: 506 QAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAEIEQEMATLQ-YTNPQLLEQLKIERL 564
Query: 584 PPQMPQLGMPSPMPGSLPTPSSHPMSMPVPVGMQGSMNQMAPPMQQGHYMGMNPMHSGGG 643
+ + P P G+ P+ P P QG M+Q+ QQ H PM+
Sbjct: 565 AQKQVEQIQPPPSSGT-------PLLGPQPFPGQGPMSQIPQGFQQPHPSQQMPMNMAQM 617
Query: 644 APPQVGGFPNGMQGPPNSSGPQMYPQG 670
PP P G PP G QM PQG
Sbjct: 618 GPPG----PQGQFRPPGPQG-QMGPQG 639
>sp|Q8K4P0|WDR33_MOUSE pre-mRNA 3' end processing protein WDR33 OS=Mus musculus GN=Wdr33
PE=2 SV=1
Length = 1330
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/491 (47%), Positives = 303/491 (61%), Gaps = 31/491 (6%)
Query: 67 SFAAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDN 126
+F KRMRK R+ +DY +V++Y++ R+WQRD RD +Q D++P + +N
Sbjct: 42 TFDGKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNN 101
Query: 127 PSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHD 186
P + KFV TS NK +C + V WTP GRRL+TG+ SGEFTLWNG +FNFE ILQAHD
Sbjct: 102 PMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHD 161
Query: 187 HAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSC 246
+R+M WSHND WM++ D GG +KYWQ+NMNNVK + AHKE++R+ SF TD KF +C
Sbjct: 162 SPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQ-AHKEAIREASFSPTDNKFATC 220
Query: 247 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSL--VKLWDAKSGRE 304
SDD TV++WDF RC EER L GHG DVK VDWHPTK L+VSG KDS +K WD K+G+
Sbjct: 221 SDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQS 280
Query: 305 LCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMK-ELESFRGHRKDVTALAWH 363
L + H HKN V+ VK N NGNW+LTAS+D + KL+DIR +K EL+ FRGH+K+ TA+AWH
Sbjct: 281 LATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH 340
Query: 364 PFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTK 421
P HE F SG DGS+ W VG E + H+ +W LAWHP+G++LC SNDHT+K
Sbjct: 341 PVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSK 400
Query: 422 FWCRNRPGDTARDKFNMGQNQGYGEQNAVFAGRMPGNFPLPEGPTTPGPFAPGLTRN--- 478
FW RNRPGD RD++N+ G E + P + + G P + +
Sbjct: 401 FWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMG 460
Query: 479 -------EGTIPGVGVAMPLSIPSFDSSAQGEQKQPLSMPLGAPPLPPGPHPSLLTANQQ 531
E TIPG+ M + D ++K P + P + A Q
Sbjct: 461 KDESSEIEMTIPGLDWGM-EEVMQKDQKKVPQKKVPYAKP--------------IPAQFQ 505
Query: 532 QGYQQNPPPMP 542
Q + QN P+P
Sbjct: 506 QAWMQNKVPIP 516
>sp|Q7RY68|PFS2_NEUCR Polyadenylation factor subunit 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=pfs-2 PE=3 SV=2
Length = 660
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/402 (43%), Positives = 250/402 (62%), Gaps = 36/402 (8%)
Query: 74 RKLTQRRAVDYTSTVVRYMQIRM-WQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSFA 132
R +R DY ++VV YM+ R R S V + +P+ +DMLP A NP+ S
Sbjct: 25 RNRGRRPVTDYGASVVHYMRHRQPRYRGSYAGEVERPSPSYIVDMLPPYARVTNPADSVP 84
Query: 133 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 192
++ +H+SLNK + IN V WTP GRRL+T S SGEFTLWNG FNFE I+QAHD AIR++
Sbjct: 85 SRHLHSSLNKIKHPINVVRWTPEGRRLLTASSSGEFTLWNGTGFNFETIMQAHDSAIRAL 144
Query: 193 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 252
V+SH+D+W+VS D G IKYWQ N NNV++ + H + +RDL+F D KF + SDD T+
Sbjct: 145 VYSHSDDWLVSADHDGIIKYWQPNFNNVESIR-GHTDPIRDLAFSPNDTKFVTASDDQTL 203
Query: 253 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 312
KV+DFA + +LTGHGWD KS DWHP++ L+VSG KD LVKLWD ++GR L + HGHK
Sbjct: 204 KVFDFAGGSTDMTLTGHGWDAKSCDWHPSRGLIVSGSKDHLVKLWDPRTGRCLTTLHGHK 263
Query: 313 NMVLCVKWNQ-NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFV 371
N + + + GN + T+++DQ +++D+R M+++ RGH KD++ L WHP H
Sbjct: 264 NTITKTLFERVQGNCLATSARDQTARVFDLRMMRDIALLRGHEKDISTLTWHPVHSNLLS 323
Query: 372 SGSLDGSIFHWLVG----------------HET------------PQVEIHNVHDNTVWD 403
+G DGS+FH+L+ ++T P +I HD +W
Sbjct: 324 TGGSDGSLFHYLLDEPNTAPDGSVMPIPAVYDTADPSSAPAQPIYPAHKIPYAHDFAIWS 383
Query: 404 LAWHPIGYLLC--SNDHTTKFWCRNRPG---DTARDKFNMGQ 440
L WHP+G++L SND T+FW R RPG ++ D++++G+
Sbjct: 384 LDWHPLGHILASGSNDRITRFWSRARPGEAPESFNDRYHIGE 425
>sp|Q9UTN4|PFS2_SCHPO Polyadenylation factor subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pfs2 PE=4 SV=1
Length = 509
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/515 (39%), Positives = 285/515 (55%), Gaps = 61/515 (11%)
Query: 70 AKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPST 129
A+ ++K RR VDY S + +Y+ R + + V + P I++ P Y N ++
Sbjct: 7 ARIIQKPMTRRTVDYGSGLSKYIVNRHLRSNRYHIHVPRPNPNQIINLYPPYEYKYNNTS 66
Query: 130 SFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAI 189
S K++HTS NK R IN V WTP GRRL+TGS +GEFTLWNG +FNFE+I Q+HD+A+
Sbjct: 67 SLCTKYIHTSANKARHVINVVRWTPDGRRLLTGSSTGEFTLWNGLTFNFELINQSHDYAV 126
Query: 190 RSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDD 249
R WS + W++SGD GG +KY++ N+NNVK + AH+ VRD++F D KF + SDD
Sbjct: 127 RCAEWSTDGRWLISGDGGGMVKYFEPNLNNVKIVQ-AHEMEVRDVAFSPNDSKFVTASDD 185
Query: 250 TTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFH 309
++KVW+F EE LTGHGWDVK+VDWHP+K LL SG KD+LVK WD ++G + + H
Sbjct: 186 GSLKVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFWDPRTGTCIATLH 245
Query: 310 GHKNMVLCVKWNQN--GNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHE 367
GHKN ++ + +N N++ T S+D +++D+RAMK++ RGH KDV + WHP +
Sbjct: 246 GHKNTIMQASFQKNFGSNYLATVSRDSTCRVFDLRAMKDVRVLRGHEKDVNCVTWHPLYP 305
Query: 368 EYFVSGSLDGSIFHWLVG----------HET--------------PQVEIHNVHDNTVWD 403
+G DGS+ H+ + HE P EI HD +W
Sbjct: 306 NLLTTGGSDGSVNHYSLDEPPLLSQQKYHEKHPNVTLSASSYLLYPTAEIPFAHDLGIWS 365
Query: 404 LAWHPIGYLLC--SNDHTTKFWCRNRPGD--TARDKFNMGQNQGYGEQNAVFAGRMPG-- 457
+ +HP+G+LLC SND TT+FW R+RP D + D+ ++G+ Q A+ + R
Sbjct: 366 MQYHPLGHLLCTGSNDKTTRFWSRSRPDDKESTMDRHHLGEEQS----EAMLSQRKAAIE 421
Query: 458 ---NFPLPEGPTTP------GPFAPGLTRNEGTIPGVGVAMPLSIPSFDSSAQGEQKQP- 507
N+ E P T P G+ +PG+G ++PSF S Q Q Q
Sbjct: 422 EDDNYEPDENPLTETLANAHNPQFSGVL----NLPGLG-----TMPSFPSPYQHGQPQIP 472
Query: 508 --LSMPLGAPPLPPGPHPSL---LTANQQQGYQQN 537
L L P S LT+ Q GY QN
Sbjct: 473 GMLHASLSNSYAEPSTQNSFIPGLTSKSQDGYPQN 507
>sp|P0CS47|PFS2_CRYNB Polyadenylation factor subunit 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PFS2 PE=3 SV=1
Length = 713
Score = 342 bits (876), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 247/420 (58%), Gaps = 7/420 (1%)
Query: 72 RMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSF 131
R RK+ RR VDY V ++ + + R + P+ ++ LP VA NPSTS
Sbjct: 61 RKRKIKPRRTVDYQGGVQKWRMLNKLKGVHEFRPAIHPNPSDIVNFLPPVALRSNPSTSI 120
Query: 132 AAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRS 191
+VHTS+NK R V WTP RRL+TG+ G+FTLWNG SFN+E I Q HD +IRS
Sbjct: 121 CDYWVHTSINKERSPTRVVRWTPDARRLLTGNDKGQFTLWNGASFNYESITQVHDDSIRS 180
Query: 192 MVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTT 251
+SHN +VS D GG IKY+ ++ N+ + H+E+ D+S+ D +F +C DD
Sbjct: 181 FTYSHNGQALVSADKGGTIKYFTPHLTNIHGFQ-GHREACHDVSWSPNDERFVTCGDDGL 239
Query: 252 VKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGH 311
VK+W + +EERSL+GHGWDV+ VDWHPTK L+VSG KD LVK WD ++G++L + H
Sbjct: 240 VKIWSYREAKEERSLSGHGWDVRCVDWHPTKGLIVSGSKDMLVKFWDPRTGKDLSTLHSS 299
Query: 312 KNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFV 371
K+ + +W+ +G+ V TA +D +I+L+DIR +ELE +GH K+V + WHP H V
Sbjct: 300 KSTINTCRWSPDGHLVATAGQDSVIRLFDIRTFRELEVLKGHEKEVNCIEWHPIHHSLLV 359
Query: 372 SGSLDGSIFHWLVGHETPQVEIHNV---HDNTVWDLAWHPIGYLLC--SNDHTTKFWCRN 426
SG G+I ++ + TP I + H++ V+ L++HP+G++LC S D T +FWCR
Sbjct: 360 SGDALGTINYFSLLSPTPSTPITTLSAAHEDAVFSLSFHPLGHILCSGSKDFTARFWCRA 419
Query: 427 R-PGDTARDKFNMGQNQGYGEQNAVFAGRMPGNFPLPEGPTTPGPFAPGLTRNEGTIPGV 485
R PG DK+++ + ++ R G LP G G + + +PG+
Sbjct: 420 RPPGGQEFDKWHLTEEGAAQKELERITKREWGTNALPANAAGGGGGGGGGDKQQVALPGL 479
>sp|P0CS46|PFS2_CRYNJ Polyadenylation factor subunit 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PFS2 PE=3 SV=1
Length = 712
Score = 338 bits (868), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 161/375 (42%), Positives = 233/375 (62%), Gaps = 7/375 (1%)
Query: 72 RMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSF 131
R RK+ RR VDY V ++ + + R + P+ ++ LP VA NPSTS
Sbjct: 61 RKRKIKPRRTVDYQGGVQKWRMLNKLKGVHEFRPAIHPNPSDIVNFLPPVALRSNPSTSI 120
Query: 132 AAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRS 191
+VHTS+NK R V WTP RRL+TG+ G+FTLWNG SFN+E I Q HD +IRS
Sbjct: 121 CDYWVHTSINKERSPTRVVRWTPDARRLLTGNDKGQFTLWNGASFNYESITQVHDDSIRS 180
Query: 192 MVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTT 251
+SHN +VS D GG IKY+ ++ N+ + H+E+ D+S+ D +F +C DD
Sbjct: 181 FTYSHNGQALVSADKGGTIKYFTPHLTNIHGFQ-GHREACHDVSWSPNDERFVTCGDDGL 239
Query: 252 VKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGH 311
VK+W + +EERSL+GHGWDV+ VDWHPTK L+VSG KD LVK WD ++G++L + H
Sbjct: 240 VKIWSYREAKEERSLSGHGWDVRCVDWHPTKGLIVSGSKDMLVKFWDPRTGKDLSTLHSS 299
Query: 312 KNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFV 371
K+ + +W+ +G+ V TA +D +I+L+DIR +ELE +GH K+V + WHP H V
Sbjct: 300 KSTINTCRWSPDGHLVATAGQDSVIRLFDIRTFRELEVLKGHEKEVNCIEWHPIHHSLLV 359
Query: 372 SGSLDGSIFHWLVGHETPQVEIHNV---HDNTVWDLAWHPIGYLLC--SNDHTTKFWCRN 426
SG G+I ++ + TP I + H++ V+ L++HP+G++LC S D T +FWCR
Sbjct: 360 SGDALGTINYFSLLSPTPSTPITTLSAAHEDAVFSLSFHPLGHILCSGSKDFTARFWCRA 419
Query: 427 R-PGDTARDKFNMGQ 440
R PG DK+++ +
Sbjct: 420 RPPGGQEFDKWHLTE 434
>sp|Q4I7X1|PFS2_GIBZE Polyadenylation factor subunit 2 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PFS2 PE=3
SV=1
Length = 612
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 227/357 (63%), Gaps = 32/357 (8%)
Query: 115 IDMLPTVAYTDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQ 174
+DMLP A + S K +H+SLNK + IN V WTP GRRL+T S SGEFTLWNG
Sbjct: 66 VDMLPPAARVTKAADSIPIKHLHSSLNKIKHPINVVRWTPEGRRLLTASTSGEFTLWNGT 125
Query: 175 SFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDL 234
FNFE I+QAHD AIR++ +SH+D+W++S D GA+KYWQ N NNV++ +AH + +RDL
Sbjct: 126 GFNFETIMQAHDSAIRALEYSHSDDWLISADHDGAVKYWQPNFNNVQS-INAHTDPIRDL 184
Query: 235 SFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLV 294
+F +D KF + SDD+T+K++DFA Q E L GHGWD KSVDWHPTK LLVSG KD LV
Sbjct: 185 AFSPSDSKFVTASDDSTLKIFDFALGQMESKLEGHGWDAKSVDWHPTKGLLVSGSKDHLV 244
Query: 295 KLWDAKSGRELCSFHGHKNMVLCVKWNQ-NGNWVLTASKDQIIKLYDIRAMKELESFRGH 353
KLWD ++ R L + HGHK+ + V + + G + T+++DQ +++D+R M+++ +GH
Sbjct: 245 KLWDPRTSRCLTTLHGHKSTITKVLFEKVRGACLATSARDQTARVFDLRMMRDICLLKGH 304
Query: 354 RKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHET------------------------- 388
KD++ L WHP H +G +DGS+FH+L+
Sbjct: 305 EKDISTLTWHPVHPNLLSTGGMDGSLFHYLLDSPNPPPGQSFTVAPYDSPDPTTVPAQSV 364
Query: 389 -PQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTKFWCRNRPGDTA--RDKFNMGQ 440
P ++ HD +W L WHP+G++L SND T+FW R RPGD +D++++G+
Sbjct: 365 WPTHKVPYAHDYAIWSLDWHPLGHILASGSNDRITRFWSRARPGDAEVFQDRYHIGE 421
>sp|Q2TZG4|PFS2_ASPOR Polyadenylation factor subunit 2 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=pfs2 PE=3 SV=1
Length = 610
Score = 323 bits (827), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 159/404 (39%), Positives = 238/404 (58%), Gaps = 36/404 (8%)
Query: 79 RRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAI-DMLPTVAYTDNPSTSFAAKFVH 137
R DY S++V++M+ R + R + A+ I DMLP +A +P + + +H
Sbjct: 32 RLVTDYGSSLVQWMRTRRPRYKGGHRMETERPSASYIVDMLPPLARIHSPVDTIPVRHLH 91
Query: 138 TSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAH----DHAIRSMV 193
S+ K++ I V WTP GRRL+TG +GEF LWNG +FNFE ++ AH + S+
Sbjct: 92 QSIGKSKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAFNFETVMDAHYDQLQAGVTSLA 151
Query: 194 WSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVK 253
WSH+ +W++SG G IKYW+ N NNV+ AH ++VRDL++ +D KF S SDDTT+K
Sbjct: 152 WSHSHDWLISGGQKGDIKYWRPNFNNVETIDDAHHDAVRDLAWSPSDTKFLSASDDTTLK 211
Query: 254 VWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKN 313
++DF + LTGH WDVKS DWHPTK LLVSG KD VK WD ++ R L + H HKN
Sbjct: 212 IFDFTSRTADTVLTGHNWDVKSCDWHPTKGLLVSGSKDHQVKFWDPRTARCLTTLHSHKN 271
Query: 314 MVLCVKWNQ-NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVS 372
V ++++ N N + T+S+DQ +++D+R M+++ RGH K V++L WHP H +
Sbjct: 272 TVTATRFSRVNQNLLATSSRDQTARVFDLRMMRDICILRGHEKPVSSLTWHPIHSSLIST 331
Query: 373 GSLDGSIFHWLVGH------ETPQV--------------------EIHNVHDNTVWDLAW 406
GS DGS++H+L+ + P + + H T+W L W
Sbjct: 332 GSEDGSLYHYLLDEPNVPSGQIPTIAPYDSPDPANTPAQVIYPAHRVQYAHSATIWSLDW 391
Query: 407 HPIGYLLC--SNDHTTKFWCRNRPGDTA--RDKFNMGQNQGYGE 446
HP+G++L S D+ T+FW R RPG+T+ +D+F++G+ +
Sbjct: 392 HPLGHILASGSKDNFTRFWSRARPGETSYMKDRFHIGEEAAEAQ 435
>sp|Q6BVZ3|PFS2_DEBHA Polyadenylation factor subunit 2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PFS2 PE=3 SV=2
Length = 504
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/459 (37%), Positives = 248/459 (54%), Gaps = 43/459 (9%)
Query: 70 AKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPS- 128
A + +K RR VD+ + + R+ R D + ++ + ID+LP+ AY N
Sbjct: 39 ASQEKKTAYRRTVDHGNNMGRWYINRSLGIDDQPIGKIRPESSYLIDLLPSPAYASNSVR 98
Query: 129 --------TSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEM 180
KFVH S NK + SIN V WTP GRRL+ S SGEFT+WNG +FNFE
Sbjct: 99 ENKNNMSIMDIQTKFVHLSSNKAKHSINTVKWTPEGRRLLVASHSGEFTVWNGMTFNFET 158
Query: 181 ILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTD 240
I+QAHD AI S+ +SHND W++SGD G IKYWQ N NNV + H + +RD++F D
Sbjct: 159 IMQAHDSAILSLKYSHNDEWLLSGDQSGVIKYWQTNFNNVNI-INGHSDGIRDIAFSPND 217
Query: 241 LKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAK 300
KF +CSDD+T+K+W+F QEERSL GH WDVKS DWHP L+VSG KD+L+KLWD +
Sbjct: 218 SKFLTCSDDSTMKIWNFNNGQEERSLVGHHWDVKSADWHPNLGLIVSGSKDNLIKLWDPR 277
Query: 301 SGRELCSFHGHKNMVLCVKWNQNGNWVLTA--SKDQIIKLYDIRAMKELESFRGHRKDVT 358
+ + + HG K+ + K+ G L A S+D+ +++D+R MK++ R H D++
Sbjct: 278 ASSCVSTLHGFKHTITKTKFQPTGTKRLLASVSRDKSCRIFDLRTMKDILVIRDHETDLS 337
Query: 359 ALAWHPFHEEYFVSGSLDGSIFHWLVG---------------HETPQVEIHNV---HDNT 400
+ WHP H + + DGS+ H+++ +P H + H+
Sbjct: 338 CVEWHPVHPSMITTAAYDGSMNHYIMDSYISDNNIKNDSNNNSTSPIEASHKIPYAHEKA 397
Query: 401 VWDLAWHPIGYLLCS--NDHTTKFWCRNRPGD--TARDKFNMGQNQG---YGEQNAVFAG 453
+ L +HP+G+LLCS D + +FW R RP D + +D G YG N + A
Sbjct: 398 IHALEYHPLGHLLCSAGADRSARFWSRARPNDPMSFQDALYTNDKVGAWYYGVNNNINAV 457
Query: 454 RMPGNFPL-PEGPTTPGPF-APGLTR----NEGTIPGVG 486
P + + P++ PGL NE T G G
Sbjct: 458 IEPSTASVNKDDPSSAQAINLPGLNNLPNGNESTTNGWG 496
>sp|Q75AV4|PFS2_ASHGO Polyadenylation factor subunit 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PSF2
PE=3 SV=1
Length = 449
Score = 295 bits (755), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 156/367 (42%), Positives = 225/367 (61%), Gaps = 14/367 (3%)
Query: 74 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPST-SFA 132
+ ++QRR VD +S Y ++ +++ + +Q D++P AY D+ +
Sbjct: 11 KYVSQRRTVDMSSP---YDRLYFYKKHAIPLRTIQPESTYTADIMPPDAYRDHRRVLNIP 67
Query: 133 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 192
KF H S NK + I + WTP GRRL+ + SGEF+LWNG SFNFE I+QAHD A+ M
Sbjct: 68 TKFTHLSSNKVKHVIPAITWTPEGRRLVVATYSGEFSLWNGSSFNFESIMQAHDSAVTVM 127
Query: 193 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 252
+SH +W++SGD G IK WQ N N VK AH E +RD+SF +D KF +CSDD +
Sbjct: 128 QYSHAGDWLISGDADGTIKIWQPNFNMVKVLDRAHTECMRDISFSYSDQKFVTCSDDNVL 187
Query: 253 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 312
K+W+F+ Q+ER L+GH WDVKS DWHP L+VSG KD+L+KLWD ++GR + + G K
Sbjct: 188 KIWNFSNGQQERVLSGHHWDVKSCDWHPKMGLIVSGSKDNLIKLWDPRTGRNVSTILGLK 247
Query: 313 NMVLCVKWN-QNGNWVLTASKDQIIKLYDIRA-MKELESFRGHRKDVTALAWHPFHEEYF 370
+ V+ K+ GN + SKD+ IK+YD+R M+EL++ R D +L+WHP +E F
Sbjct: 248 HTVIKTKFQPTQGNLLAVVSKDKSIKIYDMRQHMRELQTIRDD-MDYMSLSWHPINETIF 306
Query: 371 VSGSLDGSIFHWLVGHE----TPQVE-IHNVHDNTVWDLAWHPIGYLLCS--NDHTTKFW 423
G +G+I H+ + H+ TP I H+ +V LA+ P+G++L S D T +FW
Sbjct: 307 SVGCYNGAIKHFDLLHDNSNSTPACHTIPYAHEKSVTSLAYSPVGHILASAAKDRTIRFW 366
Query: 424 CRNRPGD 430
R+RP D
Sbjct: 367 ARSRPVD 373
>sp|Q5AZX0|PFS2_EMENI Polyadenylation factor subunit 2 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=pfs2 PE=3 SV=1
Length = 567
Score = 289 bits (740), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 223/400 (55%), Gaps = 55/400 (13%)
Query: 79 RRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAA-AIDMLPTVAYTDNPSTSFAAKFVH 137
R DY S++V++M+ R + R + A+ +DMLP +A +P S + +H
Sbjct: 28 RLVTDYGSSMVQWMRNRRPKYQGGHRMETERPSASYMVDMLPPLARIHSPVDSIPVRHLH 87
Query: 138 TSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHN 197
S+ K++ I V WTP GRRL+TG +GEF LWNG +FNFE ++
Sbjct: 88 QSIGKSKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAFNFETVM--------------- 132
Query: 198 DNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDF 257
D G +KYW+ N NNV+ AH ++VRDL++ +D KF S SDDTT+K++DF
Sbjct: 133 --------DKGDVKYWRPNFNNVETIDDAHHDAVRDLAWSPSDTKFLSASDDTTLKIYDF 184
Query: 258 ARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLC 317
+ LTGH WDVKS DWHPTK LLVSG KD VK WD ++ R L + H HKN V
Sbjct: 185 TARTCDTVLTGHNWDVKSCDWHPTKGLLVSGSKDHQVKFWDPRTARCLTTLHSHKNTVTA 244
Query: 318 VKWNQ-NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLD 376
K+++ N N + T+S+DQ +++D+R M+++ RGH K ++ L WHP H +GS D
Sbjct: 245 TKFSRVNNNLLATSSRDQTARVFDLRMMRDICILRGHEKPISTLTWHPVHCSLISTGSED 304
Query: 377 GSIFHWLVGH------ETPQV--------------------EIHNVHDNTVWDLAWHPIG 410
GS++H+L+ + P V I H T+W L WHP+G
Sbjct: 305 GSLYHYLLDEPNLPAGQIPTVAPYDSPDPANTPAQVIYPAHRIQYAHAATIWTLDWHPLG 364
Query: 411 YLLC--SNDHTTKFWCRNRPGDTA--RDKFNMGQNQGYGE 446
++L S D+ T+FW R RPG+T+ +D+F++G+ +
Sbjct: 365 HILASGSKDNFTRFWSRARPGETSYLKDRFHIGEEAAEAQ 404
>sp|Q59WJ4|PFS2_CANAL Polyadenylation factor subunit 2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=PFS2 PE=3 SV=1
Length = 543
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/406 (37%), Positives = 229/406 (56%), Gaps = 46/406 (11%)
Query: 70 AKRMRKLTQRRAVDYTSTVVR-YMQIRMWQRDSRDRTVLQATPAAA--IDMLPTVAYTDN 126
A + +K RR D+ + + R Y++ + + + + P ++ ID+LP++AY+ +
Sbjct: 46 ASQEKKQAYRRITDHGNNMGRWYIEKSLGLTNRSQQAIGTIRPESSYLIDLLPSLAYSSS 105
Query: 127 ------------PSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQ 174
KFVH S NK + +IN V WTP GRRL+ S SGEFTLWNG
Sbjct: 106 FNLNRRNNKNNLAVLDLQTKFVHLSSNKVKHTINTVKWTPEGRRLLVASHSGEFTLWNGM 165
Query: 175 SFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDL 234
+FNFE I+QAH+ I +M +S++D W++SGD G +KYWQ N NNV N SAH VRD+
Sbjct: 166 TFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFNNVN-NISAHANGVRDI 224
Query: 235 SFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLV 294
+F D KF +C DD+ +K+W+F +EER+L+GH W+VKS DWHP L+VSG KD+LV
Sbjct: 225 AFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLV 284
Query: 295 KLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTA--SKDQIIKLYDIRAMKELESFRG 352
KLWD +S + + HG K+ V ++ NG L A S+D+ +++D+R MK++ R
Sbjct: 285 KLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMKDMLVIRD 344
Query: 353 HRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQV--------------------- 391
D++ +AWHP H + + +GSI ++L+ P
Sbjct: 345 SETDLSCVAWHPIHASMVTTAAYNGSISNFLLDSYIPDSNESVPKRSNNNSNLSTNTNNT 404
Query: 392 -----EIHNVHDNTVWDLAWHPIGYLLCS--NDHTTKFWCRNRPGD 430
+I H+ + + +HP+G+LLC+ +D T +FW R RP D
Sbjct: 405 IDAVQKIPYAHEKAIHAVEYHPLGHLLCTAGSDKTARFWSRARPND 450
>sp|P42841|PFS2_YEAST Polyadenylation factor subunit 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PFS2 PE=1 SV=1
Length = 465
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 244/445 (54%), Gaps = 35/445 (7%)
Query: 74 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYT-DNPSTSFA 132
+ +TQRR+VD +S Y+ + +R V++ + ID++P AY + +
Sbjct: 25 KYVTQRRSVDVSSP---YINLYYNRRHGLPNLVVEPETSYTIDIMPPNAYRGRDRVINLP 81
Query: 133 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 192
+KF H S NK + I + WTP GRRL+ + SGEF+LWN SF FE ++QAHD A+ +M
Sbjct: 82 SKFTHLSSNKVKHVIPAIQWTPEGRRLVVATYSGEFSLWNASSFTFETLMQAHDSAVTTM 141
Query: 193 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 252
+SH+ +WM+SGD G IK WQ N + VK +AH ES+RD++F D KF +CSDD +
Sbjct: 142 KYSHDSDWMISGDADGMIKIWQPNFSMVKEIDAAHTESIRDMAFSSNDSKFVTCSDDNIL 201
Query: 253 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 312
K+W+F+ ++ER L+GH WDVKS DWHP L+ S KD+LVKLWD +SG + S K
Sbjct: 202 KIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWDPRSGNCISSILKFK 261
Query: 313 NMVLCVKWN-QNGNWVLTASKDQIIKLYDIR-AMKELESFRGHRKDVTALAWHPFHEEYF 370
+ VL ++ GN ++ SKD+ +++DIR +MKEL R D L WHP +E F
Sbjct: 262 HTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYSMKELMCVRD-ETDYMTLEWHPINESMF 320
Query: 371 VSGSLDGSIFHW--LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCS--NDHTTKFWCRN 426
DGS+ H+ L P + I HD + L+++P+G++ + D T +FW R
Sbjct: 321 TLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDRTIRFWTRA 380
Query: 427 RPGD-TARDK--FNMGQNQG--YGEQNAVFAGRMPGNF-PLPEGPTTPGPFA-------- 472
RP D A D +N + G +G N + A R F P P T P A
Sbjct: 381 RPIDPNAYDDPTYNNKKINGWFFGINNDINAVREKSEFGAAPPPPATLEPHALPNMNGFI 440
Query: 473 --------PGLTRN--EGTIPGVGV 487
PG+ N T+PG+ +
Sbjct: 441 NKKPRQEIPGIDSNIKSSTLPGLSI 465
>sp|Q4X1Y0|PFS2_ASPFU Polyadenylation factor subunit 2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pfs2
PE=3 SV=1
Length = 510
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/361 (38%), Positives = 205/361 (56%), Gaps = 50/361 (13%)
Query: 117 MLPTVAYTDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSF 176
MLP +A +P+ + + +H S+ K++ I V WTP GRRL+TG +GEF LWNG +F
Sbjct: 1 MLPPLARIHSPADTIPVRHLHQSIGKSKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAF 60
Query: 177 NFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSF 236
NFE ++ G IKYW+ N NNV+ AH ++VRDL++
Sbjct: 61 NFETVMDVRGQK-------------------GDIKYWRPNFNNVETIDDAHHDAVRDLAW 101
Query: 237 CRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKL 296
+D KF S SDDTT+K++DF + LTGH WDVKS DWHPTK LLVSG KD VK
Sbjct: 102 SPSDTKFLSASDDTTLKIFDFTARTADTVLTGHNWDVKSCDWHPTKGLLVSGSKDHQVKF 161
Query: 297 WDAKSGRELCSFHGHKNMVLCVKWNQ-NGNWVLTASKDQIIKLYDIRAMKELESFRGHRK 355
WD ++ R L + H HKN V ++++ N N + T+S+DQ +++D+R M+++ RGH K
Sbjct: 162 WDPRTARCLTTLHSHKNTVTTTRFSRVNSNLLATSSRDQTARVFDLRMMRDICILRGHEK 221
Query: 356 DVTALAWHPFHEEYFVSGSLDGSIFHWLVGH------ETPQV------------------ 391
+++L WHP H +GS DGS++H+L+ + P +
Sbjct: 222 PISSLTWHPIHSSLISTGSEDGSLYHYLLDEPNLPSGQVPTIAPYDSPDPANTPAQVIYP 281
Query: 392 --EIHNVHDNTVWDLAWHPIGYLLC--SNDHTTKFWCRNRPGDTA--RDKFNMGQNQGYG 445
I H T+W L WHP+G++L S D+ T+FW R RPG+T+ +D+F++G+
Sbjct: 282 AHRIQYAHSATIWSLDWHPLGHILASGSKDNFTRFWSRARPGETSYMKDRFHIGEEAAEA 341
Query: 446 E 446
+
Sbjct: 342 Q 342
>sp|Q6CP71|PFS2_KLULA Polyadenylation factor subunit 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=PFS2 PE=3 SV=1
Length = 452
Score = 282 bits (722), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 154/366 (42%), Positives = 215/366 (58%), Gaps = 12/366 (3%)
Query: 74 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAY-TDNPSTSFA 132
+ +QRR +D +++ R ++ + + + ++A + +LP AY + + A
Sbjct: 12 KYTSQRRTIDISASYDRLYFLK--KHGQENSSYIEAETSYNAHILPPDAYGFHGHAINTA 69
Query: 133 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 192
KF H S NK + I + WTP GRRL+ + +GEF+LW+G SFNFE I+QAHD A+ M
Sbjct: 70 TKFTHLSSNKVKHVIPALTWTPEGRRLVVATYNGEFSLWSGSSFNFESIMQAHDSAVTVM 129
Query: 193 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 252
+SH +WMVSG G +K WQ N N VK AH E VR++SF TD KF SCSDD +
Sbjct: 130 TYSHTGDWMVSGSADGELKIWQPNFNMVKVMDQAHMECVREISFSPTDQKFVSCSDDNVL 189
Query: 253 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 312
K+W+F+ Q+ER L+GH WDVKS DWHP L+VSG KD+L+K WD +SG + + G K
Sbjct: 190 KIWNFSNGQQERVLSGHHWDVKSCDWHPKMGLIVSGSKDNLIKFWDPRSGSCVSTMLGFK 249
Query: 313 NMVLCVKWN-QNGNWVLTASKDQIIKLYDIR-AMKELESFRGHRKDVTALAWHPFHEEYF 370
+ ++ K+ + GN + SKD+ K+YDIR KEL S R D L WHP E F
Sbjct: 250 HTIISTKFQPKQGNLLSVISKDKTCKVYDIRQQAKELFSVRD-DVDYMTLQWHPIDETVF 308
Query: 371 VSGSLDGSIFHWLVGHET-PQVEIHNV---HDNTVWDLAWHPIGYLL--CSNDHTTKFWC 424
G DGSI H+ + E P HN+ H+ V LA+ PIG+++ S D T +FW
Sbjct: 309 TVGCYDGSIKHFDLSQENQPNKPTHNIPYAHEKCVTSLAYSPIGHIMASASKDRTIRFWT 368
Query: 425 RNRPGD 430
R+R D
Sbjct: 369 RSRAVD 374
>sp|Q6CGP9|PFS2_YARLI Polyadenylation factor subunit 2 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=PFS2 PE=3 SV=1
Length = 532
Score = 281 bits (720), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/425 (38%), Positives = 233/425 (54%), Gaps = 60/425 (14%)
Query: 74 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTV----LQATPAAAIDMLPTVAYTD---- 125
R+ RR VD+ S ++ R+ RT+ +++ + +D+LP AYT+
Sbjct: 64 RRPAHRRTVDHGSAFGKWHLDRL-----SGRTIQPANMRSEQSYIVDLLPPSAYTNINGS 118
Query: 126 ----NPS-TSFAA---KFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFN 177
NP TS AA KF+ +LNK R + WTP GRRL+TGS SGEFTLWNG +FN
Sbjct: 119 LRSTNPHITSVAATPAKFIQVALNKVRHPVYSATWTPDGRRLLTGSMSGEFTLWNGMTFN 178
Query: 178 FEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFC 237
FE I+QAH+ +RS+ +SH+ W++SGD G +K+WQ ++N V AH+ES+R+L+F
Sbjct: 179 FESIMQAHESGVRSLKYSHSGEWLLSGDHEGNVKFWQPSLNCVNVIDKAHRESIRELAFA 238
Query: 238 RTDLKFCSCSDDTTVKVWDF-ARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKL 296
+D KF + SDD +K+WDF E L GHGWDVKSVDWH L+VSG KD+L+KL
Sbjct: 239 PSDHKFVTGSDDGLLKIWDFHESSNAESVLKGHGWDVKSVDWHSELGLIVSGSKDNLIKL 298
Query: 297 WDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTAS--KDQIIKLYDIRAM---------- 344
WD +S + + +FHG KN V+ + G L A+ +D+ ++ D+R +
Sbjct: 299 WDPRSAKNVNTFHGFKNTVMKTTFQPTGTKRLLAAGCRDRTCRILDLRMLNSGSSEAGPT 358
Query: 345 ----------KELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHE------- 387
+ + RGH DV +L WHP H SG+ GSI+ + V
Sbjct: 359 AGTDMPTRGDRSMAVLRGHDSDVFSLTWHPTHANVVTSGTKTGSIYTFNVDTTPAGGAYG 418
Query: 388 -----TPQVEIHNVHDNTVWDLAWHPIGYLLCSN--DHTTKFWCRNRPGD--TARDKFNM 438
P I + HD V L +HP G++LCS D T+FW R RPGD + RDK+
Sbjct: 419 PDSGILPVNTIPSAHDYCVSTLDYHPEGHVLCSGGLDRMTRFWARPRPGDPTSFRDKYYE 478
Query: 439 GQNQG 443
+ +G
Sbjct: 479 PKEEG 483
>sp|Q6FJS0|PFS2_CANGA Polyadenylation factor subunit 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PFS2 PE=3 SV=1
Length = 455
Score = 269 bits (688), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 215/365 (58%), Gaps = 13/365 (3%)
Query: 74 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPS-TSFA 132
+ LT RR+VD +S+ Y ++ ++ ++ + +++P AY N +
Sbjct: 14 KYLTLRRSVDVSSS---YNRLYYLKKHGLSLPPIEPETSFTANIMPPDAYKRNDRIVNLP 70
Query: 133 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 192
KF H S NK + I + W+P GRRLI + SGEF+LWNG SF FE I+QAHD ++ +M
Sbjct: 71 TKFTHLSSNKVKHVIPAIQWSPEGRRLIVATFSGEFSLWNGSSFTFETIMQAHDTSVTTM 130
Query: 193 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 252
+SH +WM+SGD G IK WQ N N VK H E +RD++F D KF +CSDD +
Sbjct: 131 KYSHAGDWMISGDADGTIKIWQPNFNMVKELDRIHTEGIRDVAFSNNDSKFVTCSDDNIL 190
Query: 253 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 312
K+W+F+ Q+ER L+GH WDV+S DWHP L+VSG KD+LVKLWD +SG+ + + K
Sbjct: 191 KIWNFSNGQQERVLSGHHWDVRSCDWHPELGLIVSGSKDNLVKLWDPRSGQCVSTLLKFK 250
Query: 313 NMVLCVKWN-QNGNWVLTASKDQIIKLYDIRA-MKELESFRGHRKDVTALAWHPFHEEYF 370
+ VL ++ GN + SKD+ +++D+RA M EL R D L W +E F
Sbjct: 251 HTVLKTRFQPTKGNLLAAISKDKSCRVFDLRASMNELMCVRDE-VDFMELEWSTINESMF 309
Query: 371 VSGSLDGSIFHWLVGHETPQVEIHNV---HDNTVWDLAWHPIGYLLCS--NDHTTKFWCR 425
G DGS+ H+ +G +T + IH + H+ + +A++P+G++L + D T +FW R
Sbjct: 310 TVGCYDGSLKHFDLGQDTEK-PIHIIPFAHEKCISAIAYNPVGHILATAAKDRTIRFWTR 368
Query: 426 NRPGD 430
RP D
Sbjct: 369 ARPVD 373
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 2/241 (0%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
+ V ++P G L +GS LW+ + + + H H + + +S + + + SG
Sbjct: 504 VRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSR 563
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 266
G + W A H + V ++F S S D T+++WD A +E L
Sbjct: 564 DGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVL 623
Query: 267 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 326
+V S+ + P S+LV G DS V LWD SG L +F GH + V V ++ +G
Sbjct: 624 QAPAENVVSLAFSPDGSMLVH-GSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGAL 682
Query: 327 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 386
+ + S D+ I+L+D+ A +E + GH + V ++A+HP S S DG+I W +
Sbjct: 683 LASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHP-EGTTLASASEDGTIRIWPIAT 741
Query: 387 E 387
E
Sbjct: 742 E 742
Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 5/256 (1%)
Query: 170 LWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKE 229
+W+ S + L+ H +R++ +S + + SG D ++ W +A H
Sbjct: 485 VWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTH 544
Query: 230 SVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGG 289
V D++F S S D T ++W+ A E L GH V +V + P S++ SG
Sbjct: 545 YVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGS 604
Query: 290 KDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELES 349
+D ++LWD +G+E V+ + ++ +G+ +L D + L+D+ + + L +
Sbjct: 605 RDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGS-MLVHGSDSTVHLWDVASGEALHT 663
Query: 350 FRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPI 409
F GH V A+A+ P SGS D +I W V + + H V +A+HP
Sbjct: 664 FEGHTDWVRAVAFSP-DGALLASGSDDRTIRLWDVAAQEEHTTLEG-HTEPVHSVAFHPE 721
Query: 410 GYLL--CSNDHTTKFW 423
G L S D T + W
Sbjct: 722 GTTLASASEDGTIRIW 737
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 9/218 (4%)
Query: 210 IKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGH 269
I W + H + VR ++F S SDD TV++WD A +E GH
Sbjct: 483 IHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGH 542
Query: 270 GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLT 329
V + + P S++ SG +D +LW+ +G E GH + V V ++ +G+ V +
Sbjct: 543 THYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVAS 602
Query: 330 ASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETP 389
S+D I+L+D+ KE + + ++V +LA+ P V GS D ++ W V
Sbjct: 603 GSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSP-DGSMLVHGS-DSTVHLWDVASGE- 659
Query: 390 QVEIHNVHDNTVW--DLAWHPIGYLLC--SNDHTTKFW 423
+H +T W +A+ P G LL S+D T + W
Sbjct: 660 --ALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLW 695
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 137 HTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSH 196
H L + + V ++P G + +GS+ G LW+ + +LQA + S+ +S
Sbjct: 578 HAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSP 637
Query: 197 NDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWD 256
+ + +V G D + W H + VR ++F S SDD T+++WD
Sbjct: 638 DGSMLVHGSD-STVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWD 696
Query: 257 FARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLW 297
A +E +L GH V SV +HP + L S +D +++W
Sbjct: 697 VAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIW 737
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 15/223 (6%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
MV+G + + W N + S H V + F ++ + S T+K++D
Sbjct: 32 MVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELVVAGSQSGTMKIYDLEPA 91
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R+LTGH ++ +D+HP + SG D+ VKLWD + + ++ GH + V +K+
Sbjct: 92 KIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMIKF 151
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIF 380
+ +G W++TAS+D IKL+D+ K + F+ H VT + +HP +E SGS D ++
Sbjct: 152 SPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHP-NEFLLASGSSDRTVQ 210
Query: 381 HW------LVGHETPQVEIHNVHDNTVWDLAWHPIG-YLLCSN 416
W LV +P + V +++HP G YL CS+
Sbjct: 211 FWDLETFQLVSSTSPGA-------SAVRSISFHPDGSYLFCSS 246
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%)
Query: 155 TGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQ 214
+GR ++TG + + LW N + L H + S+ ++ ++ +V+G G +K +
Sbjct: 28 SGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELVVAGSQSGTMKIYD 87
Query: 215 NNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVK 274
+ + H+ S+R + F S S DT VK+WD R + GH V
Sbjct: 88 LEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVN 147
Query: 275 SVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQ 334
+ + P LV+ +D+ +KLWD G+ F H V ++++ N + + S D+
Sbjct: 148 MIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDR 207
Query: 335 IIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
++ +D+ + + S V ++++HP F S F W
Sbjct: 208 TVQFWDLETFQLVSSTSPGASAVRSISFHPDGSYLFCSSQDMLHAFGW 255
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 107/243 (44%), Gaps = 9/243 (3%)
Query: 139 SLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHND 198
SL+ + ++ V + + ++ GSQSG +++ + L H ++IR M +
Sbjct: 54 SLSGHTSPVDSVKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFG 113
Query: 199 NWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFA 258
++ SG +K W H + V + F + S+DTT+K+WD
Sbjct: 114 EFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLT 173
Query: 259 RCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCV 318
+ + H V +++HP + LL SG D V+ WD ++ + + S + V +
Sbjct: 174 MGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVRSI 233
Query: 319 KWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGS 378
++ +G+++ +S+D ++ + ++ ++F ++ W + S L G+
Sbjct: 234 SFHPDGSYLFCSSQD-MLHAFGWEPIRCFDTF--------SVGWGKVADTVIASTQLIGA 284
Query: 379 IFH 381
F+
Sbjct: 285 SFN 287
>sp|Q42384|PRL1_ARATH Protein pleiotropic regulatory locus 1 OS=Arabidopsis thaliana
GN=PRL1 PE=1 SV=1
Length = 486
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 1/198 (0%)
Query: 181 ILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTD 240
++Q H +RS+ + ++ W +G IK W +K + H E VR L+
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 241 LKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAK 300
S DD VK WD + + RS GH V + HPT +L++GG+DS+ ++WD +
Sbjct: 231 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIR 290
Query: 301 SGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTAL 360
+ ++ + GH N V V V+T S D IK +D+R K + + H+K V A+
Sbjct: 291 TKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAM 350
Query: 361 AWHPFHEEYFVSGSLDGS 378
HP E F S S D +
Sbjct: 351 TLHP-KENAFASASADNT 367
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 112/286 (39%), Gaps = 11/286 (3%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
+ V + P+ TGS +W+ + ++ L H +R + S+ +M S D
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGD 238
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 266
+K W N V + H V L+ T + D+ +VWD + +L
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFAL 298
Query: 267 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 326
+GH V SV PT +V+G D+ +K WD + G+ + + HK V + + N
Sbjct: 299 SGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENA 358
Query: 327 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH--WLV 384
+AS D K + + + A+A + + V+G +GSI+ W
Sbjct: 359 FASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVN--EDGVMVTGGDNGSIWFWDWKS 416
Query: 385 GHETPQVEI-----HNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
GH Q E + ++ + G L C D T K W
Sbjct: 417 GHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 1/237 (0%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
++ V ++P+G L +GS+ +W + +AH +RS+ + + +V+
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTAS 122
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
D +K W + + + H VR F S SDD TVK+WD + S
Sbjct: 123 DDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHS 182
Query: 266 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 325
HG V VD+HP+ + + + G D+ VK+WDA++ R L + H V + ++ +GN
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGN 242
Query: 326 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
+++TAS D +K+ D+ + L + GH+ T +A+ EYF SG D + W
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRT-GEYFASGGSDEQVMVW 298
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 154/369 (41%), Gaps = 32/369 (8%)
Query: 143 NRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMV 202
+R ++ V ++ + L +GS +W+ + + H A+ + +S + + +
Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 203 SGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQE 262
SG ++ W N+ AH +VR + FC + SDD TVKVW R +
Sbjct: 78 SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRF 137
Query: 263 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 322
SLT H V+ + P L+VS D VKLWD S + S+ H V V ++
Sbjct: 138 LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHP 197
Query: 323 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
+G + A D +K++D R + L+ ++ H V AL++HP Y ++ S D ++
Sbjct: 198 SGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP-SGNYLITASSDSTL--- 253
Query: 383 LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSNDHTTKFWCRNRPGDTARDKFNMGQNQ 442
+ DL + Y L + +R G + F G
Sbjct: 254 -----------------KILDLMEGRLLYTLHGHQGPATTVAFSRTG----EYFASG--- 289
Query: 443 GYGEQNAVFAGRMPGNFPLPEGPTTPGPFAPGLTRNEGTIPGVGVAMPLSIPSFDSSAQG 502
G EQ V+ NF + + P LT + GT+P + + +P S QG
Sbjct: 290 GSDEQVMVW----KSNFDIVDYGDMKARRPPPLTSSSGTLPKMDLPVPPGRDRSLESVQG 345
Query: 503 EQKQPLSMP 511
E ++ +SMP
Sbjct: 346 EPQESISMP 354
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 4/218 (1%)
Query: 138 TSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHN 197
T + ++ V + G+ L+T S +W+ F L H + +R +S +
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPD 156
Query: 198 DNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDF 257
+VS D +K W + H V + F + + D TVKVWD
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDA 216
Query: 258 ARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLC 317
+ + H V ++ +HP+ + L++ DS +K+ D GR L + HGH+
Sbjct: 217 RTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT 276
Query: 318 VKWNQNGNWVLTASKDQIIKL----YDIRAMKELESFR 351
V +++ G + + D+ + + +DI ++++ R
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVWKSNFDIVDYGDMKARR 314
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 4/163 (2%)
Query: 263 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 322
ER GH V VD+ L SG DS + +W K F GHK+ V CV ++
Sbjct: 12 ERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 323 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
+G+ + + S+D+ ++++ E FR H V ++ + + V+ S D ++ W
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS-DGQSLVTASDDKTVKVW 130
Query: 383 LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTKFW 423
+ + H N V + P G L+ S+D T K W
Sbjct: 131 STHRQRFLFSLTQ-HINWVRCAKFSPDGRLIVSASDDKTVKLW 172
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 120/243 (49%), Gaps = 22/243 (9%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
MVS + IK W + + H ++V+D+SF + SCS D T+K+WDF
Sbjct: 121 MVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQTF 180
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ +++ GH +V SV + P L+S +D +K+W+ +G + +F GH+ V V+
Sbjct: 181 ENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRV 240
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 368
NQ+G+ + + S DQ ++++ + A KE ++ R H V +AW P
Sbjct: 241 NQDGSLLASCSNDQTVRVW-VVANKECKAELREHEHVVECIAWAPESCNGHVSEVMGAEK 299
Query: 369 ------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIG-YLL-CSNDHTT 420
+ +SGS D +I W + + + HDN V + WHP G Y++ S+D T
Sbjct: 300 KGRSGPFLLSGSRDKTIKMWDISTGVCIMTLVG-HDNWVRGVVWHPGGKYIISASDDKTI 358
Query: 421 KFW 423
+ W
Sbjct: 359 RVW 361
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 23/257 (8%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
++ V + G+ L + S LW+ Q+F + HDH + S+ + N ++++S
Sbjct: 150 AVQDVSFDQQGKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISAS 209
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 210 RDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWVVANKECKAE 269
Query: 266 LTGHGWDVKSVDWHPTKS------------------LLVSGGKDSLVKLWDAKSGRELCS 307
L H V+ + W P L+SG +D +K+WD +G + +
Sbjct: 270 LREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWDISTGVCIMT 329
Query: 308 FHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHE 367
GH N V V W+ G ++++AS D+ I+++D + + ++ H+ T++ FH
Sbjct: 330 LVGHDNWVRGVVWHPGGKYIISASDDKTIRVWDYKNKRCQKTLEAHQHFCTSI---DFHR 386
Query: 368 E--YFVSGSLDGSIFHW 382
Y ++GS+D ++ W
Sbjct: 387 SAPYVITGSVDQTVKVW 403
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 265 SLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNG 324
SL+GH + V +HP S++VS +D+ +K+WD ++G + GH + V V ++Q G
Sbjct: 101 SLSGHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQG 160
Query: 325 NWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLV 384
+ + S D IKL+D + + +++ GH +V+++ + P + ++ +S S D +I W +
Sbjct: 161 KLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMP-NGDFLISASRDKTIKMWEL 219
Query: 385 GHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
V+ H V + + G LL CSND T + W
Sbjct: 220 ATGYC-VKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVW 259
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 1/237 (0%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
++ V ++P+G L +GS+ +W + +AH +RS+ + + V+
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTAS 122
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
D +K W + + S H VR F S SDD TVK+WD + + S
Sbjct: 123 DDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHS 182
Query: 266 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 325
HG V VD+HP+ + + + G D+ VK+WD ++ R L + H V + ++ +GN
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGN 242
Query: 326 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
+++TAS D +K+ D+ + L + GH+ T +A+ EYF SG D + W
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR-TGEYFASGGSDEQVMVW 298
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 11/261 (4%)
Query: 143 NRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMV 202
+R ++ V ++ ++L +GS +W+ + + H A+ + +S + + +
Sbjct: 18 HRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 203 SGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQE 262
SG ++ W N+ AH +VR + FC F + SDD TVKVW R +
Sbjct: 78 SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKF 137
Query: 263 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 322
SL+ H V+ + P L+VS D VKLWD S + S+ H V V ++
Sbjct: 138 LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHP 197
Query: 323 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGS-------- 374
+G + A D +K++D+R + L+ ++ H V L++HP Y ++ S
Sbjct: 198 SGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP-SGNYLITASSDSTLKIL 256
Query: 375 --LDGSIFHWLVGHETPQVEI 393
++G + + L GH+ P +
Sbjct: 257 DLMEGRLLYTLHGHQGPATTV 277
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 4/248 (1%)
Query: 177 NFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSF 236
+ E + H A+ + +S N + SG + W + + HK++V ++F
Sbjct: 10 SLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNF 69
Query: 237 CRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKL 296
+ S S D TV++W E H V+SV + V+ D VK+
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Query: 297 WDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKD 356
W + L S H N V C K++ +G +++AS D+ +KL+D + + + S+ H
Sbjct: 130 WATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGF 189
Query: 357 VTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIG-YLL-C 414
VT + +HP +G +D ++ W V ++ + +H V L++HP G YL+
Sbjct: 190 VTYVDFHPSGTCIAAAG-MDNTVKVWDV-RTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 247
Query: 415 SNDHTTKF 422
S+D T K
Sbjct: 248 SSDSTLKI 255
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%)
Query: 138 TSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHN 197
T + ++ V + G+ +T S +W F L H + +R +S +
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD 156
Query: 198 DNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDF 257
+VS D +K W + + H V + F + + D TVKVWD
Sbjct: 157 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Query: 258 ARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLC 317
+ + H V + +HP+ + L++ DS +K+ D GR L + HGH+
Sbjct: 217 RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT 276
Query: 318 VKWNQNGNWVLTASKDQIIKLY 339
V +++ G + + D+ + ++
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVW 298
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 263 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 322
ER GH V VD+ L SG DS + +W K F GHK+ V CV ++
Sbjct: 12 ERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 323 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
+G+ + + S+D+ ++++ E FR H V ++ + + FV+ S D ++ W
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS-DGQSFVTASDDKTVKVW 130
Query: 383 LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTKFW 423
H + + H N V + P G L+ S+D T K W
Sbjct: 131 -ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 1/237 (0%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
++ V ++P+G L +GS+ +W + +AH +RS+ + + V+
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTAS 122
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
D +K W + + S H VR F S SDD TVK+WD + S
Sbjct: 123 DDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 182
Query: 266 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 325
HG V VD+HP+ + + + G D+ VK+WD ++ R L + H V + ++ +GN
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGN 242
Query: 326 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
+++TAS D +K+ D+ + L + GH+ T +A+ EYF SG D + W
Sbjct: 243 YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRT-GEYFASGGSDEQVMVW 298
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 11/261 (4%)
Query: 143 NRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMV 202
+R ++ V ++ ++L +GS +W+ + H A+ + +S + + +
Sbjct: 18 HRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLA 77
Query: 203 SGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQE 262
SG ++ W N+ AH +VR + FC F + SDD TVKVW R +
Sbjct: 78 SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKF 137
Query: 263 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 322
SL+ H V+ + P L+VS D VKLWD S + S+ H V V ++
Sbjct: 138 LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHP 197
Query: 323 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGS-------- 374
+G + A D +K++D+R + L+ ++ H V AL++HP Y V+ S
Sbjct: 198 SGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNYLVTASSDSTLKIL 256
Query: 375 --LDGSIFHWLVGHETPQVEI 393
++G + + L GH+ P +
Sbjct: 257 DLMEGRLLYTLHGHQGPATTV 277
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 4/248 (1%)
Query: 177 NFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSF 236
+ E + H A+ S+ +S N + SG + W + HK++V ++F
Sbjct: 10 SLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNF 69
Query: 237 CRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKL 296
+ S S D TV++W E H V+SV + V+ D VK+
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Query: 297 WDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKD 356
W + L S H N V C K++ +G +++AS D+ +KL+D + + + S+ H
Sbjct: 130 WSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF 189
Query: 357 VTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIG-YLL-C 414
VT + +HP +G +D ++ W V ++ + +H V L++HP G YL+
Sbjct: 190 VTYVDFHPSGTCIAAAG-MDNTVKVWDV-RTHRLLQHYQLHSAAVNALSFHPSGNYLVTA 247
Query: 415 SNDHTTKF 422
S+D T K
Sbjct: 248 SSDSTLKI 255
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%)
Query: 138 TSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHN 197
T + ++ V + G+ +T S +W+ F L H + +R +S +
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPD 156
Query: 198 DNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDF 257
+VS D +K W + H V + F + + D TVKVWD
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Query: 258 ARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLC 317
+ + H V ++ +HP+ + LV+ DS +K+ D GR L + HGH+
Sbjct: 217 RTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATT 276
Query: 318 VKWNQNGNWVLTASKDQIIKLY 339
V +++ G + + D+ + ++
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVW 298
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 263 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 322
ER GH V SVD+ L SG DS + +W K F GHK+ V CV ++
Sbjct: 12 ERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP 71
Query: 323 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
+G+ + + S+D+ ++++ E FR H V ++ + + FV+ S D ++ W
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS-DGQSFVTASDDKTVKVW 130
Query: 383 LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTKFW 423
+ + H N V + P G L+ S+D T K W
Sbjct: 131 STHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKTVKLW 172
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 134/281 (47%), Gaps = 8/281 (2%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
+ V+++P G L +G LW+ S N LQ + +R +V+S N + +G
Sbjct: 1077 VRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSS 1136
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 266
++ W + H V ++F S S D TV++WD + + L
Sbjct: 1137 DQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYIL 1196
Query: 267 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 326
GH V SV ++P S L SG D V+LW+ S + LC+F GH + V V +N +G+
Sbjct: 1197 QGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSM 1256
Query: 327 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 386
+ + S D+ ++L+DI + K L +F+GH V ++A++P SGS D ++ W +
Sbjct: 1257 LASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNP-DGSMLASGSGDQTVRLWEISS 1315
Query: 387 ETPQVEIHNVHDNTVW--DLAWHPIGYLLC--SNDHTTKFW 423
+H +T W + + P G +L S+D T + W
Sbjct: 1316 SKC---LHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLW 1353
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 134/279 (48%), Gaps = 4/279 (1%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
+ V+++P L +GS LW+ S I Q H + S+ ++ + + + +G
Sbjct: 951 VRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSG 1010
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 266
++ W + + H VR + F S SDD TV++WD + +L
Sbjct: 1011 DQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTL 1070
Query: 267 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 326
GH V+SV + P ++L SGG D +V+LWD SG L + G+ + V + ++ NG
Sbjct: 1071 QGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVT 1130
Query: 327 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 386
+ S DQI++L+DI + K L + +GH V A+A+ P SGS D ++ W +
Sbjct: 1131 LANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSP-DGATLASGSGDQTVRLWDIS- 1188
Query: 387 ETPQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTKFW 423
+ + I H + V + ++P G L S+D T + W
Sbjct: 1189 SSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLW 1227
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 134/279 (48%), Gaps = 4/279 (1%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
+ V+++ G L +GS LW+ S N LQ H +RS+V+S + + SG D
Sbjct: 1035 VRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGD 1094
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 266
++ W + N + VR L F + + S D V++WD + + +L
Sbjct: 1095 DQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTL 1154
Query: 267 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 326
GH V +V + P + L SG D V+LWD S + L GH + V V +N +G+
Sbjct: 1155 QGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGST 1214
Query: 327 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 386
+ + S DQ ++L++I + K L +F+GH V ++ ++P SGS D ++ W +
Sbjct: 1215 LASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNP-DGSMLASGSSDKTVRLWDIS- 1272
Query: 387 ETPQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTKFW 423
+ + H N V +A++P G +L S D T + W
Sbjct: 1273 SSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLW 1311
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 132/279 (47%), Gaps = 4/279 (1%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
+N V ++P G L +GS LW+ S ILQ H + S+V++ + + + SG
Sbjct: 1161 VNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSS 1220
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 266
++ W+ N + H V + F S S D TV++WD + + +
Sbjct: 1221 DQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTF 1280
Query: 267 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 326
GH V SV ++P S+L SG D V+LW+ S + L +F GH + V V ++ +G
Sbjct: 1281 QGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTM 1340
Query: 327 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 386
+ + S DQ ++L+ I + + L +F GH V ++ + P SGS D ++ W +
Sbjct: 1341 LASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSP-DGAILASGSGDQTVRLWSISS 1399
Query: 387 ETPQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTKFW 423
+ H+N V + + P G LL S+D T + W
Sbjct: 1400 GKCLYTLQG-HNNWVGSIVFSPDGTLLASGSDDQTVRLW 1437
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 4/238 (1%)
Query: 188 AIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCS 247
++ ++ +S + +GD GG +++W+ H V + F + S S
Sbjct: 866 SVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGS 925
Query: 248 DDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCS 307
DD TV++WD + Q ++ GH V+SV + P +L SG D V+LWD SG L
Sbjct: 926 DDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYI 985
Query: 308 FHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHE 367
F GH V V +N +G+ + T S DQ ++L+DI + + F+GH V ++ +
Sbjct: 986 FQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSS-DG 1044
Query: 368 EYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCS--NDHTTKFW 423
SGS D ++ W + + H + V + + P G +L S +D + W
Sbjct: 1045 AMLASGSDDQTVRLWDISSGNCLYTLQG-HTSCVRSVVFSPDGAMLASGGDDQIVRLW 1101
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 10/296 (3%)
Query: 133 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 192
A ++ K S+ V ++P G+ TG G W + + + H+ + S+
Sbjct: 853 ANLAYSVFTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSV 912
Query: 193 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 252
+S + + SG D ++ W + H VR + F L S S D TV
Sbjct: 913 GFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTV 972
Query: 253 KVWDFARCQEERSLTGH-GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGH 311
++WD + + GH GW V SV ++ S+L +G D V+LWD S + F GH
Sbjct: 973 RLWDISSGECLYIFQGHTGW-VYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGH 1031
Query: 312 KNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFV 371
+ V V ++ +G + + S DQ ++L+DI + L + +GH V ++ + P
Sbjct: 1032 TSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSP-DGAMLA 1090
Query: 372 SGSLDGSIFHWLVGHETPQVEIHNVHDNTVWD--LAWHPIGYLLC--SNDHTTKFW 423
SG D + W + ++ + T W L + P G L S+D + W
Sbjct: 1091 SGGDDQIVRLWDISSGNC---LYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLW 1143
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 1/238 (0%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
+N V++ P G L +GS LW+ S Q H + + S+ ++ + + + SG
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSG 1304
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 266
++ W+ + + H V ++F S SDD TV++W + + +
Sbjct: 1305 DQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTF 1364
Query: 267 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 326
GH V SV + P ++L SG D V+LW SG+ L + GH N V + ++ +G
Sbjct: 1365 LGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTL 1424
Query: 327 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLV 384
+ + S DQ ++L++I + + L + GH V ++A+ SGS D +I W V
Sbjct: 1425 LASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSS-DGLILASGSDDETIKLWDV 1481
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
+N V + P G L +GS LW S Q H + S+ +S + + SG D
Sbjct: 1287 VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSD 1346
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 266
++ W + H V + F S S D TV++W + + +L
Sbjct: 1347 DQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTL 1406
Query: 267 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 326
GH V S+ + P +LL SG D V+LW+ SG L + HGH N V V ++ +G
Sbjct: 1407 QGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLI 1466
Query: 327 VLTASKDQIIKLYDIRAMKELESFRGHR 354
+ + S D+ IKL+D++ + +++ + +
Sbjct: 1467 LASGSDDETIKLWDVKTGECIKTLKSEK 1494
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 24/245 (9%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
MVS + IK W + + H +SV+D+SF +T SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGF 182
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R++ GH +V SV P +VS +D +K+W+ +G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAW-----HPFHEE------ 368
NQ+G + + S DQ ++++ + A KE ++ R H V ++W HP E
Sbjct: 243 NQDGTLLASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESAHPTISEATGSEN 301
Query: 369 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDH 418
+ +SGS D +I W + + + HDN V + +HP G + C++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVG-HDNWVRGVLFHPGGRFVVSCADDK 360
Query: 419 TTKFW 423
T + W
Sbjct: 361 TLRIW 365
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ + + TG+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
+K W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAE 271
Query: 266 LTGHGWDVKSVDW-----HPTKS---------------LLVSGGKDSLVKLWDAKSGREL 305
L H V+ + W HPT S L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCL 331
Query: 306 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 365
+ GH N V V ++ G +V++ + D+ ++++D + + +++ H VT+L +H
Sbjct: 332 MTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHK- 390
Query: 366 HEEYFVSGSLDGSIFHW 382
Y V+GS+D ++ W
Sbjct: 391 ASPYVVTGSVDQTVKVW 407
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 262 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 321
E+ +L+GH V V +HP SL+VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFD 159
Query: 322 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 381
Q G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D ++
Sbjct: 160 QTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTMKM 218
Query: 382 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
W V V+ H V + + G LL CSND T + W
Sbjct: 219 WEVA-TGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 91/217 (41%), Gaps = 20/217 (9%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
+++ V P G +++ S+ +W + H +R + + + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCS 253
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFC----------------RTDLK----FCS 245
+ ++ W KA H+ V +S+ + K S
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLS 313
Query: 246 CSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGREL 305
S D T+K+WD + +L GH V+ V +HP +VS D +++WD K+ R +
Sbjct: 314 GSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCM 373
Query: 306 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 342
+ H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 374 KTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 116/244 (47%), Gaps = 16/244 (6%)
Query: 199 NWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFA 258
N VS + +IK W + H +SV+D++F + SCS D VK+WDF
Sbjct: 135 NVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKFLASCSADMQVKLWDFT 194
Query: 259 RCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCV 318
Q ++LTGH +V SV + P+ LVS +D +K+W+ +G +F GH + V
Sbjct: 195 IYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVSTGYCTKTFIGHTEWIRSV 254
Query: 319 KWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAW--HPFH---------- 366
+ + GN + + S D I+++ + + + RGH V +AW HP +
Sbjct: 255 RPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAWASHPQNLNSLPSSMNS 314
Query: 367 EEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW- 423
VSGS D +I W V + HDN V L +HP G LL S+D T + W
Sbjct: 315 SLLLVSGSRDRTIRFWDVNIGICLFVLIG-HDNWVRQLVFHPHGRLLLSASDDKTIRVWD 373
Query: 424 CRNR 427
+NR
Sbjct: 374 LKNR 377
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 135/311 (43%), Gaps = 25/311 (8%)
Query: 133 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 192
AKF +L +R I RVL+ P ++ S+ +W+ ++ FE L+ H +++ +
Sbjct: 114 AKF---TLTGHRSPITRVLFHPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDV 170
Query: 193 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 252
+ + ++ S +K W + + H +V ++F + S S D T+
Sbjct: 171 AFDPSGKFLASCSADMQVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTI 230
Query: 253 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 312
K+W+ + ++ GH ++SV P +LL S D +++W +S GH+
Sbjct: 231 KMWEVSTGYCTKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHE 290
Query: 313 NMVLCVKWN---QNGN----------WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTA 359
++V C+ W QN N +++ S+D+ I+ +D+ L GH V
Sbjct: 291 HVVECIAWASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNIGICLFVLIGHDNWVRQ 350
Query: 360 LAWHPFHEEYFVSGSLDGSIFHWLVG----HETPQVEIHNVHDNTVWDLAWHPIGYLLCS 415
L +HP H +S S D +I W + H+T H V V LA + I S
Sbjct: 351 LVFHP-HGRLLLSASDDKTIRVWDLKNRRCHKTLNAHSHFVTSLDVNRLAPYAIT---GS 406
Query: 416 NDHTTKFW-CR 425
D T W CR
Sbjct: 407 VDQTIHIWDCR 417
>sp|B5X3Z6|LIS1A_SALSA Lissencephaly-1 homolog A OS=Salmo salar GN=pafah1b1-1 PE=2 SV=1
Length = 410
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 115/244 (47%), Gaps = 22/244 (9%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
MVS + IK W + + H +SV+D+SF T SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R++ GH +V SV P +VS +D +K+W+ +G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAW-----HPFHEE------- 368
NQ+G + + S DQ ++++ + + + R H V ++W HP E
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSESK 302
Query: 369 -------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHT 419
+ +SGS D +I W V + + HDN V + HP G + C++D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVG-HDNWVRGMLVHPGGKFILSCADDKT 361
Query: 420 TKFW 423
+ W
Sbjct: 362 LRIW 365
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ + + TG+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAE 271
Query: 266 LTGHGWDVKSVDW-----HPT----------KS-----LLVSGGKDSLVKLWDAKSGREL 305
L H V+ + W HPT KS L+SG +D +K+WD G L
Sbjct: 272 LREHEHVVECISWAPESAHPTILEATGSESKKSGKPGPFLLSGSRDKTIKMWDVSIGMCL 331
Query: 306 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 365
+ GH N V + + G ++L+ + D+ ++++D + + +++ H VT+L +H
Sbjct: 332 MTLVGHDNWVRGMLVHPGGKFILSCADDKTLRIWDYKNKRCMKTLGAHEHFVTSLDFHK- 390
Query: 366 HEEYFVSGSLDGSIFHW 382
+ Y V+GS+D ++ W
Sbjct: 391 NAPYVVTGSVDQTVKVW 407
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 262 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 321
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 322 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 381
G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 382 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
W V V+ H V + + G L+ CSND T + W
Sbjct: 219 WEVA-TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 92/217 (42%), Gaps = 20/217 (9%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
+++ V P G +++ S+ +W + H +R + + + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCR-----TDLK---------------FCS 245
+ ++ W KA H+ V +S+ T L+ S
Sbjct: 254 NDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSESKKSGKPGPFLLS 313
Query: 246 CSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGREL 305
S D T+K+WD + +L GH V+ + HP ++S D +++WD K+ R +
Sbjct: 314 GSRDKTIKMWDVSIGMCLMTLVGHDNWVRGMLVHPGGKFILSCADDKTLRIWDYKNKRCM 373
Query: 306 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 342
+ H++ V + +++N +V+T S DQ +K+++ R
Sbjct: 374 KTLGAHEHFVTSLDFHKNAPYVVTGSVDQTVKVWECR 410
>sp|Q5A7Q3|PRP46_CANAL Pre-mRNA-splicing factor PRP46 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=PRP46 PE=3 SV=1
Length = 389
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 101/207 (48%), Gaps = 7/207 (3%)
Query: 184 AHDHAIRSMVWSHNDN-WMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLK 242
AH IR++ N W V+G IK W N++KA + H +R L +
Sbjct: 83 AHQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPY 142
Query: 243 FCSCSDDTTVKVWDFARCQEE-----RSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLW 297
S +D +++ WD R + RS GH V S+ HP +L SGGKD +V++W
Sbjct: 143 LFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVW 202
Query: 298 DAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDV 357
D +S E + GH N + ++ + N V+T+S D I+L+D+R K H K +
Sbjct: 203 DIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSKSI 262
Query: 358 TALAWHPFHEEYFVSGSLDGSIFHWLV 384
++ HP E FVSG +G I WL+
Sbjct: 263 RSMKSHP-KEATFVSGDSNGEIKQWLL 288
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 78/201 (38%), Gaps = 47/201 (23%)
Query: 155 TGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQ 214
T + +TGS +W+ ++ + + +L H IRS+ S ++ SG + +++ W
Sbjct: 97 TNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPYLFSGGEDKSLRCWD 156
Query: 215 NNMNNVKAN---KSAH----------------------KESV------------------ 231
+N A +S H K+ V
Sbjct: 157 LERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRSRVEAMTLLGH 216
Query: 232 -RDLSFCRTDL---KFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVS 287
D++ TD + + S D T+++WD + + E +T H ++S+ HP ++ VS
Sbjct: 217 TNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSKSIRSMKSHPKEATFVS 276
Query: 288 GGKDSLVKLWDAKSGRELCSF 308
G + +K W G L F
Sbjct: 277 GDSNGEIKQWLLPKGELLNEF 297
>sp|B7PS00|LIS1_IXOSC Lissencephaly-1 homolog OS=Ixodes scapularis GN=IscW_ISCW007420
PE=3 SV=2
Length = 411
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 119/247 (48%), Gaps = 25/247 (10%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
+VS + +IK W + + H +SV+D++F T SCS D T+K+WDF
Sbjct: 121 VVSASEDASIKVWDYETGDFERTIKGHTDSVQDIAFDHTGQFLASCSADMTIKLWDFKSY 180
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R++ GH +V SV + P+ +VS +D +K+W+ +G + +F GH++ V V+
Sbjct: 181 ECLRTMHGHDHNVSSVCFLPSGDHVVSCSRDKSIKMWEVATGYCVRTFTGHRDWVRMVRV 240
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEE------------ 368
N +G+ + + S DQ ++++ + + R H V +AW P H +
Sbjct: 241 NSDGSLLASCSNDQTVRVWVVGTKECKLELREHDHVVECVAWAPAHAQLCGAAGDSNRRP 300
Query: 369 ----------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIG-YLL-CSN 416
+ VSGS D +I W V + HDN V + +HP G YLL S+
Sbjct: 301 GAGGAQGTGPFLVSGSRDKTIKVWDVSTGLALFTLVG-HDNWVRGVKFHPGGKYLLSASD 359
Query: 417 DHTTKFW 423
D T + W
Sbjct: 360 DKTLRVW 366
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 135/314 (42%), Gaps = 28/314 (8%)
Query: 138 TSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHN 197
++L +R I RVL+ P +++ S+ +W+ ++ +FE ++ H +++ + + H
Sbjct: 100 SALLGHRAPITRVLFHPVYSVVVSASEDASIKVWDYETGDFERTIKGHTDSVQDIAFDHT 159
Query: 198 DNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDF 257
++ S IK W H +V + F + SCS D ++K+W+
Sbjct: 160 GQFLASCSADMTIKLWDFKSYECLRTMHGHDHNVSSVCFLPSGDHVVSCSRDKSIKMWEV 219
Query: 258 ARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLC 317
A R+ TGH V+ V + SLL S D V++W + H ++V C
Sbjct: 220 ATGYCVRTFTGHRDWVRMVRVNSDGSLLASCSNDQTVRVWVVGTKECKLELREHDHVVEC 279
Query: 318 VKW-----------------------NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHR 354
V W G ++++ S+D+ IK++D+ L + GH
Sbjct: 280 VAWAPAHAQLCGAAGDSNRRPGAGGAQGTGPFLVSGSRDKTIKVWDVSTGLALFTLVGHD 339
Query: 355 KDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIG-YLL 413
V + +HP +Y +S S D ++ W + H+ + + H + L +H Y++
Sbjct: 340 NWVRGVKFHP-GGKYLLSASDDKTLRVWELAHQRC-CKTLDAHSHFCTSLDFHRTAPYVV 397
Query: 414 C-SNDHTTKFW-CR 425
S D T K W CR
Sbjct: 398 TGSVDQTVKVWECR 411
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 262 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 321
E +L GH + V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 98 ERSALLGHRAPITRVLFHPVYSVVVSASEDASIKVWDYETGDFERTIKGHTDSVQDIAFD 157
Query: 322 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 381
G ++ + S D IKL+D ++ + L + GH +V+++ + P ++ VS S D SI
Sbjct: 158 HTGQFLASCSADMTIKLWDFKSYECLRTMHGHDHNVSSVCFLP-SGDHVVSCSRDKSIKM 216
Query: 382 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
W V V H + V + + G LL CSND T + W
Sbjct: 217 WEVA-TGYCVRTFTGHRDWVRMVRVNSDGSLLASCSNDQTVRVW 259
>sp|Q9WUC8|PLRG1_RAT Pleiotropic regulator 1 OS=Rattus norvegicus GN=Plrg1 PE=2 SV=1
Length = 514
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 135/332 (40%), Gaps = 30/332 (9%)
Query: 181 ILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTD 240
++ H +R + + W V+G IK W +K + + H +VR +
Sbjct: 199 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 258
Query: 241 LKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAK 300
SC +D VK WD + R GH V +D HPT +LV+ +DS ++WD +
Sbjct: 259 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 318
Query: 301 SGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTAL 360
+ + + GH N V V+ ++T S D I+L+D+ A K + H+K V A+
Sbjct: 319 TKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAV 378
Query: 361 AWHPFHEEYFVSGSLDGSIFHWLV--GHETPQVEIHNVHDNTVWDLAWHPIGYLLCSNDH 418
HP H F SGS D +I W G + HN NT LA + G L+ D+
Sbjct: 379 VLHPLHYT-FASGSPD-NIKQWKFPDGGFIQNLSGHNAIINT---LAVNTDGVLVSGADN 433
Query: 419 -TTKFWCRNRPGDTARDKFNMGQNQGYGEQNAVFAGRMPGNFPLPEGPTTPGPFAPGLTR 477
T W GY Q V A PG+ + G FA R
Sbjct: 434 GTMHLW---------------DWRTGYNFQR-VHAAVQPGSL-----DSESGIFACAFDR 472
Query: 478 NEGTIPGVGVAMPLSIPSFDSSAQGEQKQPLS 509
+E + + + D +A E+ P+S
Sbjct: 473 SESRLLTAEADKTIKVYREDETAT-EETHPVS 503
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 3/224 (1%)
Query: 159 LITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMN 218
+TGS +W+ S ++ L H +R ++ S ++ S + +K W N
Sbjct: 219 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 278
Query: 219 NVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDW 278
V + H +V L T +CS D+T ++WD +L+GH V +V
Sbjct: 279 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRC 338
Query: 279 HPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKL 338
+ +++G D+ ++LWD +G+ + HK V V + + S D IK
Sbjct: 339 QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDN-IKQ 397
Query: 339 YDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
+ +++ GH + LA + + VSG+ +G++ W
Sbjct: 398 WKFPDGGFIQNLSGHNAIINTLAVNT--DGVLVSGADNGTMHLW 439
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 10/194 (5%)
Query: 154 PTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYW 213
PT L+T S+ +W+ ++ L H +A+ ++ + +++G I+ W
Sbjct: 298 PTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 357
Query: 214 QNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDV 273
+ + HK+SVR + F S S D +K W F ++L+GH +
Sbjct: 358 DLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDN-IKQWKFPDGGFIQNLSGHNAII 416
Query: 274 KSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHG--------HKNMVLCVKWNQNGN 325
++ + T +LVSG + + LWD ++G H ++ + ++++ +
Sbjct: 417 NTLAVN-TDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSES 475
Query: 326 WVLTASKDQIIKLY 339
+LTA D+ IK+Y
Sbjct: 476 RLLTAEADKTIKVY 489
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
Query: 264 RSLTGH-GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 322
R ++GH GW V+ + P V+G D +K+WD SG+ S GH + V V +
Sbjct: 198 RVISGHLGW-VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVST 256
Query: 323 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
++ + +D+ +K +D+ K + + GH V L HP + V+ S D + W
Sbjct: 257 RSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-IDVLVTCSRDSTARIW 315
Query: 383 LVGHETPQVEIHNV--HDNTVWDLAWHPIG--YLLCSNDHTTKFW 423
V + +H + H N V + + S+D T + W
Sbjct: 316 DV---RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 357
>sp|Q4RJN5|LIS1_TETNG Lissencephaly-1 homolog OS=Tetraodon nigroviridis GN=pafah1b1 PE=3
SV=1
Length = 410
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 22/244 (9%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
MVS + IK W + + H +SV+D+SF T SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTGKLLASCSADMTIKLWDFQSF 182
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R++ GH +V SV P ++S +D +K+W+ +G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEE------------ 368
NQ+G + + S DQ ++++ + + + R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILDATSSESK 302
Query: 369 -------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHT 419
+ +SGS D +I W V + + HDN V + +HP G + C++D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHPGGKFIVTCADDKT 361
Query: 420 TKFW 423
+ W
Sbjct: 362 LRIW 365
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 134/310 (43%), Gaps = 25/310 (8%)
Query: 139 SLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHND 198
+L+ +R + RV++ P +++ S+ +W+ ++ +FE L+ H +++ + +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTG 162
Query: 199 NWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFA 258
+ S IK W H +V ++ S S D T+K+W+ A
Sbjct: 163 KLLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVA 222
Query: 259 RCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCV 318
++ TGH V+ V + +L+ S D V++W S H+++V C+
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECI 282
Query: 319 KW-----------------NQNGN---WVLTASKDQIIKLYDIRAMKELESFRGHRKDVT 358
W ++G ++L+ S+D+ IK++D+ L + GH V
Sbjct: 283 SWAPESAHPTILDATSSESKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342
Query: 359 ALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIG-YLLC-SN 416
+ +HP ++ V+ + D ++ W ++ + H++ V L +H Y++ S
Sbjct: 343 GVLFHP-GGKFIVTCADDKTLRIWDYKNKRCMKTL-CAHEHFVTSLDFHKAAPYVVTGSV 400
Query: 417 DHTTKFW-CR 425
D T K W CR
Sbjct: 401 DQTVKVWECR 410
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 262 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 321
E +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 ERYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 322 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 381
G + + S D IKL+D ++ + + + GH +V+++A P + ++ +S S D ++
Sbjct: 160 LTGKLLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMP-NGDHIISASRDKTMKM 218
Query: 382 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
W V V+ H V + + G L+ CSND T + W
Sbjct: 219 WEVA-TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>sp|Q7T394|LIS1A_DANRE Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3
Length = 410
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 24/245 (9%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
+VS + IK W + + + H +SV+D+SF T SCS D T+K+WDF
Sbjct: 123 IVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R++ GH +V SV P +VS +D +K+W+ +G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAW-----HPFHEE------ 368
NQ+G + ++S DQ ++++ + A KE ++ R H V ++W HP E
Sbjct: 243 NQDGTLIASSSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESAHPTILEATGSET 301
Query: 369 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIG-YLL-CSNDH 418
+ +SGS D +I W V + + HDN V + HP G Y++ C++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVG-HDNWVRGVLVHPGGKYIVSCADDK 360
Query: 419 TTKFW 423
T + W
Sbjct: 361 TLRIW 365
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 117/259 (45%), Gaps = 25/259 (9%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ + + TG+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
IK W+ + H+E VR + + S S+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAE 271
Query: 266 LTGHGWDVKSVDW-----HPT----------KS-----LLVSGGKDSLVKLWDAKSGREL 305
L H V+ + W HPT KS L+SG +D +K+WD G L
Sbjct: 272 LREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCL 331
Query: 306 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 365
+ GH N V V + G ++++ + D+ ++++D + + ++ H VT+L F
Sbjct: 332 MTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSL---DF 388
Query: 366 HEE--YFVSGSLDGSIFHW 382
H+ Y V+GS+D ++ W
Sbjct: 389 HKTAPYVVTGSVDQTVKVW 407
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Query: 262 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 321
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFD 159
Query: 322 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 381
G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 382 WLVG 385
W V
Sbjct: 219 WEVA 222
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
+++ V P G +++ S+ +W + H +R + + + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSS 253
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCS 245
+ ++ W KA H+ V +S+ ++ K S
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLS 313
Query: 246 CSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGREL 305
S D T+K+WD + +L GH V+ V HP +VS D +++WD K+ R
Sbjct: 314 GSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCT 373
Query: 306 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 342
+ H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 374 KTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 102/202 (50%), Gaps = 2/202 (0%)
Query: 182 LQAHDHAIRSMVWSHNDNWMV-SGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTD 240
+ AH ++ S+V + +V +G D + W N N + + H V + F ++
Sbjct: 16 IVAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSE 75
Query: 241 LKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAK 300
+ S ++++WD + R+L GH +V S+D+HP + SG D+ +KLWD +
Sbjct: 76 ELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVR 135
Query: 301 SGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTAL 360
+ + GH V C++++ +G W+ +AS D +KL+D+ A K + H+ V +
Sbjct: 136 RKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 195
Query: 361 AWHPFHEEYFVSGSLDGSIFHW 382
+HP +E SGS D ++ W
Sbjct: 196 EFHP-NEYLLASGSADRTVRFW 216
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 145 CSINRV-LWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVS 203
CS++ V L +GR + TG LW+ N M L H + S+ +++++ +V+
Sbjct: 21 CSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSEELIVA 80
Query: 204 GDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEE 263
G G+++ W + HK +V L F S S DT +K+WD R
Sbjct: 81 GSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCV 140
Query: 264 RSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQN 323
GH V+ + + P L S D VKLWD +G+ + HK V ++++ N
Sbjct: 141 FRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPN 200
Query: 324 GNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
+ + S D+ ++ +D+ + + G V A+ + F G ++ W
Sbjct: 201 EYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGGKDSLRVYGW 259
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 2/202 (0%)
Query: 182 LQAHDHAIRSMVWSHNDNWMV-SGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTD 240
+ AH ++ S+V + +V +G D + W N N + + H V + F +
Sbjct: 16 IVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAE 75
Query: 241 LKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAK 300
+ S +++VWD + R+L GH +V S+D+HP + SG D+ +KLWD +
Sbjct: 76 ELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVR 135
Query: 301 SGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTAL 360
+ + GH V C++++ +G W+ +AS D +KL+D+ A K + H+ V +
Sbjct: 136 RKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 195
Query: 361 AWHPFHEEYFVSGSLDGSIFHW 382
+HP +E SGS D ++ W
Sbjct: 196 EFHP-NEYLLASGSADRTVRFW 216
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%)
Query: 150 VLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGA 209
VL +GR + TG LW+ N M L H + S+ +++ + +V+G G+
Sbjct: 27 VLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAEELIVAGSQSGS 86
Query: 210 IKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGH 269
++ W + HK +V L F S S DT +K+WD R GH
Sbjct: 87 LRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGH 146
Query: 270 GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLT 329
V+ + + P L S D VKLWD +G+ + HK V ++++ N + +
Sbjct: 147 TQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLAS 206
Query: 330 ASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
S D+ ++ +D+ + + G V A+ + F G ++ W
Sbjct: 207 GSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDGGCIFCGGRDALRVYGW 259
>sp|B5X3C4|LIS1B_SALSA Lissencephaly-1 homolog B OS=Salmo salar GN=pafah1b1-2 PE=2 SV=1
Length = 410
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 116/244 (47%), Gaps = 22/244 (9%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
MV+ + IK W + + H +SV+D+SF +T SCS D T+K+WDF
Sbjct: 123 MVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGF 182
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R++ GH +V SV P +VS +D +K+W+ +G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAW-----HPFHEE------- 368
NQ+G+ + + S DQ ++++ + + R H V +AW HP E
Sbjct: 243 NQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATSSESK 302
Query: 369 -------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHT 419
+ +SGS D +I W + + + HDN V + HP G + C++D T
Sbjct: 303 KNGKSGPFLLSGSRDKTIKMWDISTGMCLMTLVG-HDNWVRGVLVHPGGRFIVSCADDKT 361
Query: 420 TKFW 423
+ W
Sbjct: 362 LRIW 365
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ + + TG+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
IK W+ + H+E VR + + SCS+D TV+VW + +
Sbjct: 212 RDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVATSKECKAE 271
Query: 266 LTGHGWDVKSVDW-----HPT-------------KS--LLVSGGKDSLVKLWDAKSGREL 305
L H V+ + W HPT KS L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECIAWAPDTAHPTILEATSSESKKNGKSGPFLLSGSRDKTIKMWDISTGMCL 331
Query: 306 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 365
+ GH N V V + G ++++ + D+ ++++D + + +++ H VT+L H
Sbjct: 332 MTLVGHDNWVRGVLVHPGGRFIVSCADDKTLRIWDYKNKRCMKTLCAHEHFVTSLDMHQT 391
Query: 366 HEEYFVSGSLDGSIFHW 382
Y V+GS+D ++ W
Sbjct: 392 -APYVVTGSVDQTVKVW 407
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 262 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 321
E +L+GH V V +HP S++V+ +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 ERYALSGHRSPVTRVIFHPVFSVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFD 159
Query: 322 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 381
Q G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 QTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 382 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
W V V+ H V + + G L+ CSND T + W
Sbjct: 219 WEVA-TGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVW 261
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 90/216 (41%), Gaps = 20/216 (9%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
++ V P G +++ S+ +W + H +R + + + + + S +
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGSLIASCSN 254
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCSC 246
++ W KA H+ V +++ ++ K S
Sbjct: 255 DQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATSSESKKNGKSGPFLLSG 314
Query: 247 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 306
S D T+K+WD + +L GH V+ V HP +VS D +++WD K+ R +
Sbjct: 315 SRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDKTLRIWDYKNKRCMK 374
Query: 307 SFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 342
+ H++ V + +Q +V+T S DQ +K+++ R
Sbjct: 375 TLCAHEHFVTSLDMHQTAPYVVTGSVDQTVKVWECR 410
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 4/279 (1%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
+ V ++P G+R+ +GS +W+ S L+ H ++ S+ +S + + SG
Sbjct: 928 VQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSG 987
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 266
IK W H SV ++F + S SDD T+K+WD A ++L
Sbjct: 988 DKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTL 1047
Query: 267 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 326
GHG V+SV + P + SG D +K+WDA SG + GH + V V ++ +G
Sbjct: 1048 EGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQR 1107
Query: 327 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 386
V + S D IK++D + ++ GH V ++A+ P + SGS+DG+I W
Sbjct: 1108 VASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSP-DGQRVASGSIDGTIKIWDAAS 1166
Query: 387 ETPQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTKFW 423
T + H V +A+ P G + S+D T K W
Sbjct: 1167 GTCTQTLEG-HGGWVQSVAFSPDGQRVASGSSDKTIKIW 1204
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 131/282 (46%), Gaps = 8/282 (2%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ V ++ G+R+ +GS +W+ S L+ H ++ S+ +S + + SG
Sbjct: 843 SVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGS 902
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
D IK W H V+ ++F + S SDD T+K+WD A ++
Sbjct: 903 DDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQT 962
Query: 266 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 325
L GHG V SV + P + SG D +K+WD SG + GH V V ++ +G
Sbjct: 963 LEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQ 1022
Query: 326 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW--L 383
V + S D+ IK++D + ++ GH V ++ + P + SGS D +I W +
Sbjct: 1023 RVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSP-DGQRVASGSDDHTIKIWDAV 1081
Query: 384 VGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSN--DHTTKFW 423
G T +E H ++VW +A+ P G + S D T K W
Sbjct: 1082 SGTCTQTLEGHG---DSVWSVAFSPDGQRVASGSIDGTIKIW 1120
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 125/280 (44%), Gaps = 4/280 (1%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ V ++P R+ +GS +W+ S L+ H ++S+ +S + + SG
Sbjct: 885 SVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGS 944
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
D IK W H SV ++F + S S D T+K+WD A ++
Sbjct: 945 DDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQT 1004
Query: 266 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 325
L GHG V SV + P + SG D +K+WD SG + GH V V ++ +G
Sbjct: 1005 LEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQ 1064
Query: 326 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVG 385
V + S D IK++D + ++ GH V ++A+ P + SGS+DG+I W
Sbjct: 1065 RVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSP-DGQRVASGSIDGTIKIWDAA 1123
Query: 386 HETPQVEIHNVHDNTVWDLAWHPIGYLLCSN--DHTTKFW 423
T + H V +A+ P G + S D T K W
Sbjct: 1124 SGTCTQTLEG-HGGWVHSVAFSPDGQRVASGSIDGTIKIW 1162
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 1/237 (0%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ V ++P G+R+ +GS +W+ S L+ H ++S+V+S + + SG
Sbjct: 1011 SVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGS 1070
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
D IK W H +SV ++F + S S D T+K+WD A ++
Sbjct: 1071 DDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQT 1130
Query: 266 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 325
L GHG V SV + P + SG D +K+WDA SG + GH V V ++ +G
Sbjct: 1131 LEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQ 1190
Query: 326 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
V + S D+ IK++D + ++ GH V ++A+ P + SGS D +I W
Sbjct: 1191 RVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSP-DGQRVASGSSDNTIKIW 1246
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 132/298 (44%), Gaps = 6/298 (2%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ V ++P G+R+ +GS +W+ S L+ H ++ S+ +S + + SG
Sbjct: 969 SVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGS 1028
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
D IK W H V+ + F + S SDD T+K+WD ++
Sbjct: 1029 DDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQT 1088
Query: 266 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 325
L GHG V SV + P + SG D +K+WDA SG + GH V V ++ +G
Sbjct: 1089 LEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQ 1148
Query: 326 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVG 385
V + S D IK++D + ++ GH V ++A+ P + SGS D +I W
Sbjct: 1149 RVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSP-DGQRVASGSSDKTIKIWDTA 1207
Query: 386 HETPQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTKFWCRNRPGDTARDKFNMGQN 441
T + H V +A+ P G + S+D+T K W + T N+G
Sbjct: 1208 SGTCTQTLEG-HGGWVQSVAFSPDGQRVASGSSDNTIKIW--DTASGTCTQTLNVGST 1262
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 4/162 (2%)
Query: 264 RSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQN 323
++L GHG V SV + + SG D +K+WD SG + GH V V ++ +
Sbjct: 835 QTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPD 894
Query: 324 GNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWL 383
V + S D+ IK++D + ++ GH V ++A+ P + SGS D +I W
Sbjct: 895 RERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSP-DGQRVASGSDDHTIKIWD 953
Query: 384 VGHETPQVEIHNVHDNTVWDLAWHPIGYLLC--SNDHTTKFW 423
T + H ++V +A+ P G + S D T K W
Sbjct: 954 AASGTCTQTLEG-HGSSVLSVAFSPDGQRVASGSGDKTIKIW 994
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 8/285 (2%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
+++ V ++P G L + S +W FE + H I + WS + +VSG
Sbjct: 74 AVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS 133
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
D +K W+ + H V +F S S D +V++WD + ++
Sbjct: 134 DDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT 193
Query: 266 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKN-MVLCVKWNQNG 324
L H V +V ++ SL+VS D L ++WD SG+ L + N V VK++ NG
Sbjct: 194 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 253
Query: 325 NWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALA--WHPFHEEYFVSGSLDGSIFHW 382
++L A+ D +KL+D K L+++ GH+ + + + ++ VSGS D ++ W
Sbjct: 254 KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIW 313
Query: 383 LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCS----NDHTTKFW 423
+ V+ H +TV A HP ++ S ND T K W
Sbjct: 314 NL-QSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 12/261 (4%)
Query: 130 SFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAI 189
++ KF T ++ ++ I+ V W+ R L++GS +W + L+ H + +
Sbjct: 101 AYDGKFEKT-ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYV 159
Query: 190 RSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDD 249
++ N +VSG +++ W AH + V + F R S S D
Sbjct: 160 FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 219
Query: 250 TTVKVWDFARCQEERSLTGHGWD---VKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 306
++WD A Q ++L D V V + P +++ D+ +KLWD G+ L
Sbjct: 220 GLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 277
Query: 307 SFHGHKNMVLCVKWN---QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWH 363
++ GHKN C+ N G W+++ S+D ++ ++++++ + ++ +GH V A H
Sbjct: 278 TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACH 337
Query: 364 PFHEEYFVSGSL--DGSIFHW 382
P E S +L D +I W
Sbjct: 338 P-TENIIASAALENDKTIKLW 357
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 119/248 (47%), Gaps = 16/248 (6%)
Query: 184 AHDHAIRSM-VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLK 242
AH A+ + + + +V+G + + W N + H + ++F +++
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVL 73
Query: 243 FCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSG 302
+ + T+K+WD + R+LTGH + SVD+HP SG D+ +K+WD +
Sbjct: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
Query: 303 RELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAW 362
+ ++ GH V +++ +G WV++ +D I+K++D+ A K L F+ H + +L +
Sbjct: 134 GCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDF 193
Query: 363 HPFHEEYFVSGSLDGSIFHW------LVGHETPQVEIHNVHDNTVWDLAWHPIG-YLLCS 415
HP HE +GS D ++ W L+G P+ V L+++P G +LC
Sbjct: 194 HP-HEFLLATGSADRTVKFWDLETFELIGSGGPETA-------GVRCLSFNPDGKTVLCG 245
Query: 416 NDHTTKFW 423
+ K +
Sbjct: 246 LQESLKIF 253
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 4/249 (1%)
Query: 134 KFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMV 193
+FV S N I R + R L+TG + + LW N + L H I S+
Sbjct: 11 EFVAHSAAVNCLKIGR----KSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVT 66
Query: 194 WSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVK 253
+ ++ + +G G IK W + + H+ + + F F S S DT +K
Sbjct: 67 FDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 254 VWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKN 313
+WD + + GH V + + P +VSGG+D++VK+WD +G+ L F H+
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG 186
Query: 314 MVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSG 373
+ + ++ + + T S D+ +K +D+ + + S V L+++P +
Sbjct: 187 QIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGL 246
Query: 374 SLDGSIFHW 382
IF W
Sbjct: 247 QESLKIFSW 255
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 24/245 (9%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
MV+ + IK W + + H +SV+D+SF + SCS D T+K+WDF
Sbjct: 123 MVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R++ GH +V SV P +VS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 368
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSTISDATGSET 301
Query: 369 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDH 418
+ +SGS D +I W + + + HDN V + +HP G + C++D
Sbjct: 302 KRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVG-HDNWVRGVQFHPGGKFILSCADDK 360
Query: 419 TTKFW 423
T + W
Sbjct: 361 TIRIW 365
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 136/310 (43%), Gaps = 25/310 (8%)
Query: 139 SLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHND 198
+L+ +R + RV++ P ++T S+ +W+ ++ +FE L+ H +++ + + H+
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 199 NWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFA 258
+ S IK W H +V ++ S S D T+K+W+
Sbjct: 163 KLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 259 RCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCV 318
++ TGH V+ V + +L+ S D V++W + H+++V C+
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 319 KW-----------------NQNGN---WVLTASKDQIIKLYDIRAMKELESFRGHRKDVT 358
W ++G ++L+ S+D+ IK++DI L + GH V
Sbjct: 283 SWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVR 342
Query: 359 ALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIG-YLLC-SN 416
+ +HP ++ +S + D +I W ++ + N H++ V L +H Y++ S
Sbjct: 343 GVQFHP-GGKFILSCADDKTIRIWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 417 DHTTKFW-CR 425
D T K W CR
Sbjct: 401 DQTVKVWECR 410
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 262 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 321
E+ +L+GH V V +HP S++V+ +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 322 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 381
+G + + S D IKL+D + + L + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 382 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
W V V+ H V + + G L+ CSND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>sp|P0CS48|PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PRP46 PE=3 SV=1
Length = 473
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 21/249 (8%)
Query: 176 FNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLS 235
+ ++ H +R++ + W +G IK W +K + + H ++R L+
Sbjct: 172 WKLTRVISGHMGWVRAVAMDPGNQWFATGAGDRVIKIWDLASGELKLSLTGHISTIRGLA 231
Query: 236 FCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVK 295
SC++D VK WD + R GH V S+ HPT +LV+GG+D+ V+
Sbjct: 232 VSDRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHFSGVYSLSVHPTLDVLVTGGRDASVR 291
Query: 296 LWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRK 355
+WD ++ + + GH + V VK + +++ S D ++L+D+ A K + + H+K
Sbjct: 292 VWDMRTRANIFTLTGHTSTVGDVKTQDSDPQIISGSMDSTVRLWDLAAGKCMNTLTHHKK 351
Query: 356 DVTALAWHPFHEEYFVSGSLDGSIFHW----------LVGHE----TPQVEIHNV----H 397
V ALA HP + + S +I W VGHE T + NV
Sbjct: 352 SVRALAIHPTEYSFASASSGGNNIKKWKCPEGIFVNNFVGHEAIINTLSINSENVLFSGA 411
Query: 398 DN---TVWD 403
DN T+WD
Sbjct: 412 DNGTLTLWD 420
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 3/237 (1%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
+ V P + TG+ +W+ S ++ L H IR + S ++ S +
Sbjct: 185 VRAVAMDPGNQWFATGAGDRVIKIWDLASGELKLSLTGHISTIRGLAVSDRHPYLFSCAE 244
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 266
+K W N V + H V LS T + D +V+VWD +L
Sbjct: 245 DKMVKCWDLETNKVIRHYHGHFSGVYSLSVHPTLDVLVTGGRDASVRVWDMRTRANIFTL 304
Query: 267 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN-QNGN 325
TGH V V + ++SG DS V+LWD +G+ + + HK V + + +
Sbjct: 305 TGHTSTVGDVKTQDSDPQIISGSMDSTVRLWDLAAGKCMNTLTHHKKSVRALAIHPTEYS 364
Query: 326 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
+ +S IK + + +F GH + L+ + E SG+ +G++ W
Sbjct: 365 FASASSGGNNIKKWKCPEGIFVNNFVGHEAIINTLSINS--ENVLFSGADNGTLTLW 419
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 27/166 (16%)
Query: 264 RSLTGH-GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 322
R ++GH GW V++V P +G D ++K+WD SG S GH + + + +
Sbjct: 176 RVISGHMGW-VRAVAMDPGNQWFATGAGDRVIKIWDLASGELKLSLTGHISTIRGLAVSD 234
Query: 323 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
++ + ++D+++K +D+ K + + GH V +L+ HP + V+G D S+ W
Sbjct: 235 RHPYLFSCAEDKMVKCWDLETNKVIRHYHGHFSGVYSLSVHPTL-DVLVTGGRDASVRVW 293
Query: 383 ----------LVGHET-----------PQVEIHNVHDNTV--WDLA 405
L GH + PQ+ I D+TV WDLA
Sbjct: 294 DMRTRANIFTLTGHTSTVGDVKTQDSDPQI-ISGSMDSTVRLWDLA 338
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 16/202 (7%)
Query: 154 PTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYW 213
PT L+TG + +W+ ++ L H + + +D ++SG ++ W
Sbjct: 276 PTLDVLVTGGRDASVRVWDMRTRANIFTLTGHTSTVGDVKTQDSDPQIISGSMDSTVRLW 335
Query: 214 QNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSD-DTTVKVWDFARCQEERSLTGHGWD 272
+ HK+SVR L+ T+ F S S +K W + GH
Sbjct: 336 DLAAGKCMNTLTHHKKSVRALAIHPTEYSFASASSGGNNIKKWKCPEGIFVNNFVGHEAI 395
Query: 273 VKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNM-----------VLCVKWN 321
+ ++ + ++++L SG + + LWD K+G F K++ V C ++
Sbjct: 396 INTLSIN-SENVLFSGADNGTLTLWDYKTG---LPFQHLKDIPQPGSLDAEAGVFCSTFD 451
Query: 322 QNGNWVLTASKDQIIKLYDIRA 343
+ G ++T D+ IK+Y +A
Sbjct: 452 KTGTRLITGGADKTIKVYSEQA 473
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 24/245 (9%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
MV+ + IK W + + H +SV+D+SF + SCS D T+K+WDF
Sbjct: 123 MVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R++ GH +V SV P +VS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 368
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSTISDATGSET 301
Query: 369 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDH 418
+ +SGS D +I W + + + HDN V + +HP G + C++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVG-HDNWVRGVQFHPGGKFILSCADDK 360
Query: 419 TTKFW 423
T + W
Sbjct: 361 TIRIW 365
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 25/259 (9%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ + + +G+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Query: 266 LTGHGWDVKSVDWHPTKS--------------------LLVSGGKDSLVKLWDAKSGREL 305
L H V+ + W P S L+SG +D +K+WD G L
Sbjct: 272 LREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCL 331
Query: 306 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 365
+ GH N V V+++ G ++L+ + D+ I+++D + + +++ H VT+L F
Sbjct: 332 MTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSL---DF 388
Query: 366 HEE--YFVSGSLDGSIFHW 382
H+ Y V+GS+D ++ W
Sbjct: 389 HKTAPYVVTGSVDQTVKVW 407
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 262 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 321
E+ +L+GH V V +HP S++V+ +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 322 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 381
+G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 382 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
W V V+ H V + + G L+ CSND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
++ V P G +++ S+ +W Q+ H +R + + + + S +
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCSC 246
++ W KA H+ V +S+ ++ K S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSG 314
Query: 247 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 306
S D T+K+WD + +L GH V+ V +HP ++S D +++WD K+ R +
Sbjct: 315 SRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMK 374
Query: 307 SFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 342
+ + H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 125/290 (43%), Gaps = 12/290 (4%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S++ + ++ G+ L TGS + +WN + L +H I WS N ++ S
Sbjct: 215 SVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFSWSSNSQFIASAS 274
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
D +K + H V SF S D TV+VWDF +
Sbjct: 275 DDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKC 334
Query: 266 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNM-VLCVKWNQNG 324
+ H + S+ ++ + + + D +++WDA SG L + + V V ++ NG
Sbjct: 335 IPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNG 394
Query: 325 NWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWH---PFHEEYFVSGSLDGSIFH 381
++L+A D +KL+D + K L+ + GH+ L + P ++ +SGS DG I
Sbjct: 395 KYLLSAQLDSSLKLWDPKKAKPLKYYNGHKNKKYCLFANMSVPL-GKHIISGSEDGRILV 453
Query: 382 WLVGHETPQ-VEIHNVHDNTVWDLAWHPIGYLLCSN----DHTTKFWCRN 426
W + +T Q V+I H V HP ++ S D+ + W RN
Sbjct: 454 WSI--QTKQIVQILEGHTTPVLATDSHPTLNIIASGGLEPDNVIRIWRRN 501
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 4/234 (1%)
Query: 172 NGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESV 231
NG+ F+ + H ++ + +S+ ++ +G IK W ++H+ +
Sbjct: 200 NGE-FSLVKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGI 258
Query: 232 RDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKD 291
D S+ S SDDTTVK++D R++ GH V ++P SL+ S G D
Sbjct: 259 NDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFD 318
Query: 292 SLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESF- 350
V++WD K+G + H + + + +N +GN + T+S D I+++D + L++
Sbjct: 319 ETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLV 378
Query: 351 RGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDL 404
VT + + P + +Y +S LD S+ W P ++ +N H N + L
Sbjct: 379 DTDHAPVTFVCFSP-NGKYLLSAQLDSSLKLWDPKKAKP-LKYYNGHKNKKYCL 430
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 24/245 (9%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
MVS + IK W + + H +SV+D+SF T SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R++ GH +V SV P +VS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 368
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSTISEATGSET 301
Query: 369 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDH 418
+ +SGS D +I W + + + HDN V + +H G + C++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDK 360
Query: 419 TTKFW 423
T + W
Sbjct: 361 TLRVW 365
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 25/259 (9%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ + + TG+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Query: 266 LTGHGWDVKSVDWHPTKS--------------------LLVSGGKDSLVKLWDAKSGREL 305
L H V+ + W P S L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCL 331
Query: 306 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 365
+ GH N V V ++ G ++L+ + D+ ++++D + + +++ H VT+L F
Sbjct: 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSL---DF 388
Query: 366 HEE--YFVSGSLDGSIFHW 382
H+ Y V+GS+D ++ W
Sbjct: 389 HKTAPYVVTGSVDQTVKVW 407
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 262 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 321
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 322 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 381
G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 382 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
W V V+ H V + + G L+ CSND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 92/216 (42%), Gaps = 20/216 (9%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
++ V P G +++ S+ +W Q+ H +R + + + + S +
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCSC 246
++ W KA H+ V +S+ ++ K S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSG 314
Query: 247 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 306
S D T+K+WD + +L GH V+ V +H ++S D +++WD K+ R +
Sbjct: 315 SRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMK 374
Query: 307 SFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 342
+ + H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>sp|P0CS49|PRP46_CRYNB Pre-mRNA-splicing factor PRP46 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PRP46 PE=3
SV=1
Length = 473
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 21/249 (8%)
Query: 176 FNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLS 235
+ ++ H +R++ W +G IK W +K + + H ++R L+
Sbjct: 172 WKLTRVISGHMGWVRAVAMDPGSQWFATGAGDRVIKIWDLASGELKLSLTGHISTIRGLA 231
Query: 236 FCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVK 295
SC++D VK WD + R GH V S+ HPT +LV+GG+D+ V+
Sbjct: 232 VSDRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHFSGVYSLSVHPTLDVLVTGGRDASVR 291
Query: 296 LWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRK 355
+WD ++ + + GH + V VK + +++ S D ++L+D+ A K + + H+K
Sbjct: 292 VWDMRTRANIFTLTGHTSTVGDVKTQDSDPQIISGSMDSTVRLWDLAAGKCMNTLTHHKK 351
Query: 356 DVTALAWHPFHEEYFVSGSLDGSIFHW----------LVGHE----TPQVEIHNV----H 397
V ALA HP + + S +I W VGHE T + NV
Sbjct: 352 SVRALAIHPTEYSFASASSGGNNIKKWKCPEGIFVNNFVGHEAIINTLSINSENVLFSGA 411
Query: 398 DN---TVWD 403
DN T+WD
Sbjct: 412 DNGTLTLWD 420
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 3/237 (1%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
+ V P + TG+ +W+ S ++ L H IR + S ++ S +
Sbjct: 185 VRAVAMDPGSQWFATGAGDRVIKIWDLASGELKLSLTGHISTIRGLAVSDRHPYLFSCAE 244
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 266
+K W N V + H V LS T + D +V+VWD +L
Sbjct: 245 DKMVKCWDLETNKVIRHYHGHFSGVYSLSVHPTLDVLVTGGRDASVRVWDMRTRANIFTL 304
Query: 267 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN-QNGN 325
TGH V V + ++SG DS V+LWD +G+ + + HK V + + +
Sbjct: 305 TGHTSTVGDVKTQDSDPQIISGSMDSTVRLWDLAAGKCMNTLTHHKKSVRALAIHPTEYS 364
Query: 326 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
+ +S IK + + +F GH + L+ + E SG+ +G++ W
Sbjct: 365 FASASSGGNNIKKWKCPEGIFVNNFVGHEAIINTLSINS--ENVLFSGADNGTLTLW 419
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 27/166 (16%)
Query: 264 RSLTGH-GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 322
R ++GH GW V++V P +G D ++K+WD SG S GH + + + +
Sbjct: 176 RVISGHMGW-VRAVAMDPGSQWFATGAGDRVIKIWDLASGELKLSLTGHISTIRGLAVSD 234
Query: 323 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 382
++ + ++D+++K +D+ K + + GH V +L+ HP + V+G D S+ W
Sbjct: 235 RHPYLFSCAEDKMVKCWDLETNKVIRHYHGHFSGVYSLSVHPTL-DVLVTGGRDASVRVW 293
Query: 383 ----------LVGHET-----------PQVEIHNVHDNTV--WDLA 405
L GH + PQ+ I D+TV WDLA
Sbjct: 294 DMRTRANIFTLTGHTSTVGDVKTQDSDPQI-ISGSMDSTVRLWDLA 338
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 16/202 (7%)
Query: 154 PTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYW 213
PT L+TG + +W+ ++ L H + + +D ++SG ++ W
Sbjct: 276 PTLDVLVTGGRDASVRVWDMRTRANIFTLTGHTSTVGDVKTQDSDPQIISGSMDSTVRLW 335
Query: 214 QNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSD-DTTVKVWDFARCQEERSLTGHGWD 272
+ HK+SVR L+ T+ F S S +K W + GH
Sbjct: 336 DLAAGKCMNTLTHHKKSVRALAIHPTEYSFASASSGGNNIKKWKCPEGIFVNNFVGHEAI 395
Query: 273 VKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNM-----------VLCVKWN 321
+ ++ + ++++L SG + + LWD K+G F K++ V C ++
Sbjct: 396 INTLSIN-SENVLFSGADNGTLTLWDYKTG---LPFQHLKDIPQPGSLDAEAGVFCSTFD 451
Query: 322 QNGNWVLTASKDQIIKLYDIRA 343
+ G ++T D+ IK+Y +A
Sbjct: 452 KTGTRLITGGADKTIKVYSEQA 473
>sp|Q8HXX0|LIS1_MACFA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 24/245 (9%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
MVS + IK W + + H +SV+D+SF + SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGF 182
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R++ GH +V SV P LVS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 368
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 369 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDH 418
+ +SGS D +I W V + + HDN V + +H G + C++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDK 360
Query: 419 TTKFW 423
T + W
Sbjct: 361 TLRVW 365
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 25/259 (9%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ + + +G+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSAS 211
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Query: 266 LTGHGWDVKSVDWHPTKS--------------------LLVSGGKDSLVKLWDAKSGREL 305
L H V+ + W P S L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Query: 306 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 365
+ GH N V V ++ G ++L+ + D+ ++++D + + +++ H VT+L F
Sbjct: 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL---DF 388
Query: 366 HEE--YFVSGSLDGSIFHW 382
H+ Y V+GS+D ++ W
Sbjct: 389 HKTAPYVVTGSVDQTVKVW 407
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 262 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 321
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 322 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 381
+G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHLVSASRDKTIKM 218
Query: 382 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
W V V+ H V + + G L+ CSND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 92/216 (42%), Gaps = 20/216 (9%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
++ V P G L++ S+ +W Q+ H +R + + + + S +
Sbjct: 195 VSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCSC 246
++ W KA H+ V +S+ ++ K S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 247 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 306
S D T+K+WD + +L GH V+ V +H ++S D +++WD K+ R +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 307 SFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 342
+ + H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 182 LQAHDHAIRSMVWSHND-NWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTD 240
+ AH + S+V + + +G D + W N N + + H + L +
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 241 LKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAK 300
+ S +++VWD + R+L GH ++ S+D+HP S + SG D+ +KLWD +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR 135
Query: 301 SGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTAL 360
+ + H V C++++ +G W+ +A+ D +KL+D+ A K + F GH V +
Sbjct: 136 RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVV 195
Query: 361 AWHPFHEEYFVSGSLDGSIFHW 382
+HP E SGS D +I W
Sbjct: 196 EFHP-SEYLLASGSSDRTIRFW 216
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 89/215 (41%)
Query: 150 VLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGA 209
VL TGR L TG +W+ N M L H I S+ S + +V+G G+
Sbjct: 27 VLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGS 86
Query: 210 IKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGH 269
I+ W + HK ++ L F S S DT +K+WD R H
Sbjct: 87 IRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSH 146
Query: 270 GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLT 329
V+ + + P L S D VKLWD +G+ + F GH V V+++ + + +
Sbjct: 147 TQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLAS 206
Query: 330 ASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHP 364
S D+ I+ +D+ + V + ++P
Sbjct: 207 GSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNP 241
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%)
Query: 159 LITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMN 218
++ GSQSG +W+ ++ L H I S+ + +++ SG IK W
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRK 137
Query: 219 NVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDW 278
+H ++VR L F S +DD TVK+WD + TGH V V++
Sbjct: 138 GCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEF 197
Query: 279 HPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNG 324
HP++ LL SG D ++ WD + + V C+ +N +G
Sbjct: 198 HPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDG 243
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 5/164 (3%)
Query: 132 AAKFVHTSL--NKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAI 189
AAK + T L N CS++ + P G + +GS + LW+ + ++H A+
Sbjct: 94 AAKILRTLLGHKANICSLD---FHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAV 150
Query: 190 RSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDD 249
R + +S + W+ S D +K W V + H V + F ++ S S D
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSD 210
Query: 250 TTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSL 293
T++ WD + + V+ + ++P L G +DSL
Sbjct: 211 RTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL 254
>sp|Q9GL51|LIS1_PIG Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus
scrofa GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 24/245 (9%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
MVS + IK W + + H +SV+D+SF + SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R++ GH +V SV P +VS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 368
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 369 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDH 418
+ +SGS D +I W V + + HDN V + +H G + C++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDK 360
Query: 419 TTKFW 423
T + W
Sbjct: 361 TLRVW 365
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 25/259 (9%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ + + +G+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAA 211
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Query: 266 LTGHGWDVKSVDWHPTKS--------------------LLVSGGKDSLVKLWDAKSGREL 305
L H V+ + W P S L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Query: 306 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 365
+ GH N V V ++ G ++L+ + D+ ++++D + + +++ H VT+L F
Sbjct: 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL---DF 388
Query: 366 HEE--YFVSGSLDGSIFHW 382
H+ Y V+GS+D ++ W
Sbjct: 389 HKTAPYVVTGSVDQTVKVW 407
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 262 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 321
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 322 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 381
+G + + S D IKL+D + + + + GH +V+++A P + ++ VS + D +I
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSAARDKTIKM 218
Query: 382 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
W V V+ H V + + G L+ CSND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 92/216 (42%), Gaps = 20/216 (9%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
++ V P G +++ ++ +W Q+ H +R + + + + S +
Sbjct: 195 VSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCSC 246
++ W KA H+ V +S+ ++ K S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 247 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 306
S D T+K+WD + +L GH V+ V +H ++S D +++WD K+ R +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 307 SFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 342
+ + H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan
troglodytes GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 24/245 (9%)
Query: 201 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 260
MVS + IK W + + H +SV+D+SF + SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 261 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 320
+ R++ GH +V SV P +VS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 321 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 368
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 369 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDH 418
+ +SGS D +I W V + + HDN V + +H G + C++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDK 360
Query: 419 TTKFW 423
T + W
Sbjct: 361 TLRVW 365
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 25/259 (9%)
Query: 146 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 205
S+ + + +G+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 206 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 265
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Query: 266 LTGHGWDVKSVDWHPTKS--------------------LLVSGGKDSLVKLWDAKSGREL 305
L H V+ + W P S L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Query: 306 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 365
+ GH N V V ++ G ++L+ + D+ ++++D + + +++ H VT+L F
Sbjct: 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL---DF 388
Query: 366 HEE--YFVSGSLDGSIFHW 382
H+ Y V+G +D ++ W
Sbjct: 389 HKTAPYVVTGFVDQTVKVW 407
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 262 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 321
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 322 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 381
+G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 382 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLL--CSNDHTTKFW 423
W V V+ H V + + G L+ CSND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 91/216 (42%), Gaps = 20/216 (9%)
Query: 147 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 206
++ V P G +++ S+ +W Q+ H +R + + + + S +
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 207 GGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCSC 246
++ W KA H+ V +S+ ++ K S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 247 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 306
S D T+K+WD + +L GH V+ V +H ++S D +++WD K+ R +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 307 SFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 342
+ + H++ V + +++ +V+T DQ +K+++ R
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGFVDQTVKVWECR 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 333,489,287
Number of Sequences: 539616
Number of extensions: 17048059
Number of successful extensions: 140406
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1444
Number of HSP's successfully gapped in prelim test: 3440
Number of HSP's that attempted gapping in prelim test: 69955
Number of HSP's gapped (non-prelim): 40475
length of query: 713
length of database: 191,569,459
effective HSP length: 125
effective length of query: 588
effective length of database: 124,117,459
effective search space: 72981065892
effective search space used: 72981065892
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)