Query 005126
Match_columns 713
No_of_seqs 472 out of 2730
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 16:08:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005126.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005126hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qfj_A Protein (flavin reducta 99.9 2.2E-26 7.4E-31 234.7 23.3 206 312-542 5-212 (232)
2 4eh1_A Flavohemoprotein; struc 99.9 5.1E-26 1.7E-30 233.4 22.0 203 311-542 5-219 (243)
3 1tvc_A Methane monooxygenase c 99.9 3E-26 1E-30 236.4 20.0 207 312-542 13-228 (250)
4 3lo8_A Ferredoxin--NADP reduct 99.9 1E-25 3.4E-30 240.2 22.9 218 312-544 31-283 (311)
5 3vo2_A Putative uncharacterize 99.9 1.6E-25 5.3E-30 238.8 23.2 217 312-543 36-281 (310)
6 2eix_A NADH-cytochrome B5 redu 99.9 1.5E-25 5E-30 230.1 21.4 211 311-542 13-229 (243)
7 4fk8_A Ferredoxin--NADP reduct 99.9 5.8E-26 2E-30 237.1 14.0 208 311-542 21-246 (271)
8 1fdr_A Flavodoxin reductase; f 99.9 6.1E-25 2.1E-29 226.2 20.6 208 311-542 6-224 (248)
9 3jqq_A Ferredoxin NADP reducta 99.9 5E-25 1.7E-29 235.5 20.1 214 312-542 18-296 (316)
10 1krh_A Benzoate 1,2-dioxygenas 99.9 6.8E-25 2.3E-29 236.5 21.0 205 311-542 110-319 (338)
11 1umk_A B5R, NADH-cytochrome B5 99.9 7.1E-25 2.4E-29 229.3 18.8 207 312-538 19-256 (275)
12 2r6h_A NADH:ubiquinone oxidore 99.9 1.5E-24 5.2E-29 228.4 21.0 210 311-542 11-273 (290)
13 1fnb_A Ferredoxin-NADP+ reduct 99.9 7.8E-24 2.7E-28 225.9 23.7 216 312-542 40-284 (314)
14 4g1v_A Flavohemoglobin; three 99.9 4.9E-24 1.7E-28 235.0 22.7 201 311-542 151-374 (399)
15 2cnd_A NADH-dependent nitrate 99.9 3.7E-24 1.3E-28 223.2 20.0 210 311-539 14-251 (270)
16 2qdx_A Ferredoxin reductase; o 99.9 2.1E-24 7.1E-29 223.6 17.6 209 311-541 5-229 (257)
17 2bmw_A Ferredoxin--NADP reduct 99.9 9.8E-24 3.3E-28 224.0 22.8 216 312-541 24-273 (304)
18 1gvh_A Flavohemoprotein; oxido 99.9 4.3E-24 1.5E-28 235.2 20.3 208 311-541 154-373 (396)
19 2b5o_A FNR, ferredoxin--NADP r 99.9 1.5E-23 5.1E-28 231.2 22.6 216 312-542 125-372 (402)
20 2bgi_A Ferredoxin-NADP(H) redu 99.9 6.2E-24 2.1E-28 222.1 18.5 209 311-541 18-243 (272)
21 1cqx_A Flavohemoprotein; globi 99.9 1.6E-23 5.6E-28 231.1 22.6 207 311-541 156-379 (403)
22 1ep3_B Dihydroorotate dehydrog 99.9 1.8E-23 6E-28 217.4 18.0 196 311-540 7-207 (262)
23 2rc5_A Ferredoxin-NADP reducta 99.9 7.8E-23 2.7E-27 218.1 20.3 214 312-543 24-286 (314)
24 2pia_A Phthalate dioxygenase r 99.9 5.7E-22 2E-26 212.2 21.3 195 311-542 10-211 (321)
25 3a1f_A Cytochrome B-245 heavy 99.9 2.1E-22 7.1E-27 197.4 14.2 182 405-711 1-186 (186)
26 1ddg_A Sulfite reductase (NADP 99.8 1.2E-19 4.1E-24 197.9 12.8 183 336-542 145-340 (374)
27 2gpj_A Siderophore-interacting 99.7 1.8E-17 6.1E-22 171.2 15.8 191 311-541 10-208 (252)
28 4dql_A Bifunctional P-450/NADP 99.7 2.1E-17 7.1E-22 181.2 13.4 183 336-538 156-352 (393)
29 2qtl_A MSR;, methionine syntha 99.7 1.1E-16 3.7E-21 181.9 14.7 198 339-543 278-505 (539)
30 1f20_A Nitric-oxide synthase; 99.7 5.3E-16 1.8E-20 172.3 17.3 175 353-543 208-400 (435)
31 2bpo_A CPR, P450R, NADPH-cytoc 99.7 2E-16 6.8E-21 185.0 11.6 200 337-542 414-648 (682)
32 1tll_A Nitric-oxide synthase, 99.6 6.1E-16 2.1E-20 180.9 12.9 185 339-542 418-620 (688)
33 3qfs_A CPR, P450R, NADPH--cyto 99.6 5.6E-15 1.9E-19 164.3 15.6 181 351-542 230-423 (458)
34 3qe2_A CPR, P450R, NADPH--cyto 99.6 1E-14 3.4E-19 168.8 15.2 190 339-542 381-583 (618)
35 3lyu_A Putative hydrogenase; t 99.5 1.3E-14 4.4E-19 136.5 9.4 120 405-542 3-126 (142)
36 3lrx_A Putative hydrogenase; a 99.5 1.1E-14 3.8E-19 139.5 7.6 123 401-541 3-130 (158)
37 2pia_A Phthalate dioxygenase r 91.5 0.12 4.2E-06 54.2 4.2 37 647-688 178-214 (321)
38 4eh1_A Flavohemoprotein; struc 89.8 0.1 3.6E-06 52.0 1.8 36 648-689 188-223 (243)
39 4g1v_A Flavohemoglobin; three 88.8 0.22 7.7E-06 53.8 3.6 36 648-688 342-377 (399)
40 3lyu_A Putative hydrogenase; t 87.0 0.3 1E-05 44.8 2.7 22 669-690 110-131 (142)
41 1qfj_A Protein (flavin reducta 86.7 0.29 9.9E-06 48.4 2.6 23 666-688 193-216 (232)
42 1tvc_A Methane monooxygenase c 86.2 0.41 1.4E-05 48.0 3.4 22 667-688 210-231 (250)
43 4fk8_A Ferredoxin--NADP reduct 86.1 0.46 1.6E-05 48.2 3.8 25 665-689 226-250 (271)
44 3lrx_A Putative hydrogenase; a 84.7 0.47 1.6E-05 44.3 2.8 21 669-689 115-135 (158)
45 2r6h_A NADH:ubiquinone oxidore 83.9 0.58 2E-05 47.9 3.4 23 666-688 254-276 (290)
46 3vo2_A Putative uncharacterize 81.9 0.87 3E-05 47.3 3.8 26 664-689 259-284 (310)
47 3jqq_A Ferredoxin NADP reducta 81.7 0.52 1.8E-05 49.2 2.1 24 666-689 277-300 (316)
48 3lo8_A Ferredoxin--NADP reduct 81.6 0.63 2.2E-05 48.3 2.6 44 647-690 240-286 (311)
49 1gvh_A Flavohemoprotein; oxido 81.1 0.86 3E-05 49.0 3.6 22 667-688 356-377 (396)
50 1cqx_A Flavohemoprotein; globi 80.1 1 3.5E-05 48.5 3.8 37 648-688 347-383 (403)
51 1krh_A Benzoate 1,2-dioxygenas 79.3 0.72 2.5E-05 48.4 2.2 22 667-688 301-322 (338)
52 2gpj_A Siderophore-interacting 76.6 1.1 3.8E-05 45.0 2.5 22 666-687 190-211 (252)
53 2bmw_A Ferredoxin--NADP reduct 76.2 2.3 7.9E-05 43.7 4.9 42 647-688 232-277 (304)
54 2b5o_A FNR, ferredoxin--NADP r 74.2 2.4 8.2E-05 45.8 4.5 43 647-689 330-376 (402)
55 1fdr_A Flavodoxin reductase; f 74.0 2.5 8.5E-05 41.9 4.3 24 665-688 204-228 (248)
56 2qdx_A Ferredoxin reductase; o 73.6 1.7 5.7E-05 43.5 3.0 23 666-688 211-233 (257)
57 2bgi_A Ferredoxin-NADP(H) redu 73.3 2.5 8.6E-05 42.7 4.2 23 666-688 225-247 (272)
58 1fnb_A Ferredoxin-NADP+ reduct 72.2 2.6 8.7E-05 43.7 4.0 23 666-688 265-287 (314)
59 2eix_A NADH-cytochrome B5 redu 71.7 2.2 7.6E-05 42.1 3.3 24 666-689 210-233 (243)
60 1ep3_B Dihydroorotate dehydrog 55.5 6 0.00021 39.6 3.0 33 651-688 179-211 (262)
61 1f20_A Nitric-oxide synthase; 52.0 5.8 0.0002 43.3 2.2 38 312-349 33-77 (435)
62 1umk_A B5R, NADH-cytochrome B5 51.5 5.1 0.00017 40.3 1.6 23 666-688 241-264 (275)
63 2rc5_A Ferredoxin-NADP reducta 47.3 14 0.00049 37.8 4.3 19 670-688 269-288 (314)
64 1ddg_A Sulfite reductase (NADP 40.7 11 0.00039 40.0 2.3 38 312-349 14-57 (374)
65 3s2u_A UDP-N-acetylglucosamine 37.7 21 0.00073 37.4 3.9 25 422-446 3-29 (365)
66 1tll_A Nitric-oxide synthase, 37.2 12 0.00043 43.2 2.1 22 667-688 602-623 (688)
67 2cnd_A NADH-dependent nitrate 36.7 14 0.00049 36.7 2.2 23 666-688 235-258 (270)
68 4dql_A Bifunctional P-450/NADP 33.0 17 0.00058 39.0 2.1 38 312-349 9-51 (393)
69 2qtl_A MSR;, methionine syntha 29.1 21 0.00073 39.9 2.2 38 312-349 117-160 (539)
70 3qfs_A CPR, P450R, NADPH--cyto 29.0 21 0.00073 39.0 2.1 38 312-349 65-107 (458)
71 2bpo_A CPR, P450R, NADPH-cytoc 27.4 24 0.00083 40.7 2.3 38 312-349 262-304 (682)
72 3qe2_A CPR, P450R, NADPH--cyto 26.8 24 0.00083 40.2 2.1 37 313-349 226-267 (618)
73 3a1f_A Cytochrome B-245 heavy 25.3 35 0.0012 31.3 2.7 19 524-542 147-165 (186)
No 1
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.95 E-value=2.2e-26 Score=234.66 Aligned_cols=206 Identities=14% Similarity=0.140 Sum_probs=160.4
Q ss_pred eeEEEEEEecCCeEEEEEecCCCCccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC--CchhHHHHHHH
Q 005126 312 TCILSARVFPSKAIELILPKHAGLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSLYQMI 389 (713)
Q Consensus 312 ~~ivs~~~l~~~~v~l~l~~~~~~~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~--G~~T~~L~~~~ 389 (713)
.++++.+.+++++.++++..+..+.++||||+.|.+|. .++|||||+|.|. +++.+++.||.. |++|+++.+.+
T Consensus 5 ~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~---~~~R~ySi~s~~~-~~~~l~l~i~~~~~G~~s~~~~~~l 80 (232)
T 1qfj_A 5 CKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDE---RDKRPFSMASTPD-EKGFIELHIGASEINLYAKAVMDRI 80 (232)
T ss_dssp EEEEEEEESSSSCEEEEEEESSCCCCCTTCEEEEESSS---SCEEEEECCSCTT-STTCEEEEEC------CCHHHHHHH
T ss_pred EEEEEEEecCCCEEEEEEecCCCCCcCCCCEEEEECCC---CceeeeecCCCCC-CCCcEEEEEEEccCCchhHHHHHhC
Confidence 46777888899999999987777899999999999986 4899999999986 557899999984 56888877766
Q ss_pred HhcccCCCCCCcceeEEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcch
Q 005126 390 HAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQE 469 (713)
Q Consensus 390 ~~~~~~~~~~~~~~~v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~~~~ 469 (713)
+ .|+++.|+||||.+..+...+++++|||||+||||++++++++..++ ..++++|+|++|+.+|
T Consensus 81 ~----------~Gd~v~v~gP~G~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~------~~~~v~l~~~~r~~~~ 144 (232)
T 1qfj_A 81 L----------KDHQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTALARN------PNRDITIYWGGREEQH 144 (232)
T ss_dssp H----------HHSEEEEEEEECSCCCCSCSSSCEEEEEETTCHHHHHHHHHHHHHHC------TTCCEEEEEEESSGGG
T ss_pred C----------CCCEEEEeCCccceEeCCCCCCcEEEEEecccHhHHHHHHHHHHhcC------CCCcEEEEEeeCCHHH
Confidence 5 47899999999998655445799999999999999999999998752 2478999999999999
Q ss_pred hhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHHHhccCCCCeeEEcCcchHHHHHHHH
Q 005126 470 ICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALV 542 (713)
Q Consensus 470 l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~a~~~ 542 (713)
+.+.+++.+.. +. ..+++++..++++++.+.+.+|++++....+ ....++..+|+|||++|++...-.
T Consensus 145 ~~~~~el~~l~-~~---~~~~~~~~~~s~~~~~~~g~~g~v~~~~~~~-~~~~~~~~vyvCGp~~m~~~v~~~ 212 (232)
T 1qfj_A 145 LYDLCELEALS-LK---HPGLQVVPVVEQPEAGWRGRTGTVLTAVLQD-HGTLAEHDIYIAGRFEMAKIARDL 212 (232)
T ss_dssp CTTHHHHHHHH-HH---CTTEEEEEEESSCCTTCCSEESCHHHHHHHH-CSCCTTCEEEEESCHHHHHHHHHH
T ss_pred hhhHHHHHHHH-HH---CCCeEEEEEEcCCCCCcCCceeeHHHHHHHh-cCCccccEEEEECCHHHHHHHHHH
Confidence 98887775432 21 2478999889887765555667776544332 222235679999999999876543
No 2
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.94 E-value=5.1e-26 Score=233.44 Aligned_cols=203 Identities=17% Similarity=0.240 Sum_probs=159.9
Q ss_pred ceeEEEEEEecCCeEEEEEecCC---CCccCCCeEEEEeCCCCCC--cceeeeeeeeCCCCCCCcEEEEEEeC-------
Q 005126 311 ETCILSARVFPSKAIELILPKHA---GLKFTPTSVIFMKIPSISK--FQWHSFSITSSSSVDDQTMSLIVKCD------- 378 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~---~~~~~pGQ~v~L~~P~~s~--~q~HPFTIaS~p~~~~~~l~~~Ik~~------- 378 (713)
...+++.+.+++++.++++..+. ...++||||++|.+|..+. .++|||||+|+|. ++.+++.||..
T Consensus 5 ~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~--~~~~~i~vk~~~~~~~~~ 82 (243)
T 4eh1_A 5 TFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGIEVTPEGSDYREIRQYSLSHASN--GREYRISVKREGVGSDNP 82 (243)
T ss_dssp EEEEEEEEECSSSEEEEEEEESSCSCCCCCCTTCEEEEEECCSSCSSCEEEEEEBCSCCC--SSCEEEEEECTTTTSSSC
T ss_pred EEEEEEEEEcCCCeEEEEEEeCCCCcCCCcCCCCEEEEEEecCCCccccceeeEeccCCC--CCeEEEEEEEeecCCCCC
Confidence 45677888889999999998754 3689999999999986432 3789999999874 57899999998
Q ss_pred CchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceE
Q 005126 379 GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKV 458 (713)
Q Consensus 379 G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v 458 (713)
|.+|++|++.++ .++++.|+||||.+..+ ..+++++|||||+||||++++++++..++ ..+ +
T Consensus 83 G~~S~~l~~~l~----------~G~~v~v~gP~G~~~~~-~~~~~~vliagGtGitp~~~~l~~l~~~~------~~~-v 144 (243)
T 4eh1_A 83 GLVSHYLHNNVK----------VGDSVKLYAPAGDFFYV-ERERPVVLISAGVGATPMQAILHTLAKQN------KSG-V 144 (243)
T ss_dssp CHHHHHHHHHCC----------TTCEEEEEEEECSCCCC-CCSSCEEEEEEGGGHHHHHHHHHHHHHTT------CCS-E
T ss_pred CeehhHHHhcCC----------CCCEEEEEccCcccCcC-CCCCCEEEEEccccHHHHHHHHHHHHHcC------CCe-E
Confidence 999999987543 57899999999998766 67899999999999999999999998753 124 9
Q ss_pred EEEEEeCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHHHhccCCCCeeEEcCcchHHHH
Q 005126 459 QLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWM 538 (713)
Q Consensus 459 ~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~ 538 (713)
+++|++|+.+|+.+.+++.+... . . +++++++++++++.+. .+|++++... .. ..++..+|+|||++|++.
T Consensus 145 ~l~~~~r~~~~~~~~~el~~l~~-~---~-~~~~~~~~s~~~~~~~-~~g~~~~~~~--~~-~~~~~~vyvCGp~~m~~~ 215 (243)
T 4eh1_A 145 TYLYACNSAKEHTFAQETAQLIA-Q---Q-GWMQQVWYRDESADDV-LQGEMQLAEL--IL-PIEDGDFYLCGPIGFMQY 215 (243)
T ss_dssp EEEEEESSGGGCTTHHHHHHHHH-H---H-TCEEEEEESSCCCTTC-EESSCCCTTS--CC-CTTTCEEEEEECHHHHHH
T ss_pred EEEEEeCChhhhhHHHHHHHHHH-h---C-CeEEEEEEccCCCccc-ccCCccHHHe--ec-cCCCcEEEEECCHHHHHH
Confidence 99999999999988888755332 1 2 6788888988655433 5566665443 11 124578999999999987
Q ss_pred HHHH
Q 005126 539 AALV 542 (713)
Q Consensus 539 a~~~ 542 (713)
..-.
T Consensus 216 v~~~ 219 (243)
T 4eh1_A 216 VVKQ 219 (243)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7543
No 3
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.94 E-value=3e-26 Score=236.44 Aligned_cols=207 Identities=16% Similarity=0.281 Sum_probs=162.1
Q ss_pred eeEEEEEEecCCeEEEEEec-C-C----CCccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC--CchhH
Q 005126 312 TCILSARVFPSKAIELILPK-H-A----GLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTS 383 (713)
Q Consensus 312 ~~ivs~~~l~~~~v~l~l~~-~-~----~~~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~--G~~T~ 383 (713)
.++++.+.+++++.++++.. + . ...++||||+.|.+|.. .++|||||+|.|. +++.++|+||.. |.+|+
T Consensus 13 ~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~-~~~~l~i~vk~~~~G~~s~ 89 (250)
T 1tvc_A 13 AEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPGT--DVSRSYSPANLPN-PEGRLEFLIRVLPEGRFSD 89 (250)
T ss_dssp EEBCCCEEEETTEEEEEECSSTTSSSSSCCSCCSCCEEEECTTSC--SSSEEECCBCCSS-SSCCEEEEECCCTTSSSHH
T ss_pred EEEEEEEEcCCCeEEEEEEecCCCCcccccCcCCCcEEEEEeCCC--ccccccccCCCCC-CCCeEEEEEEECCCCCchH
Confidence 44556677789999999987 5 4 57899999999999863 5899999999985 467899999997 99999
Q ss_pred HHHHHHHhcccCCCCCCcceeEEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEE
Q 005126 384 SLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYV 463 (713)
Q Consensus 384 ~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~ 463 (713)
.|++.++ .|+++.|+||||.+..+...+++++|||||+||||++++++++..++ ..++++|+|+
T Consensus 90 ~l~~~l~----------~Gd~v~v~gP~G~~~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~------~~~~v~l~~~ 153 (250)
T 1tvc_A 90 YLRNDAR----------VGQVLSVKGPLGVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEWT------APNETRIYFG 153 (250)
T ss_dssp HHHHHSS----------SSSEEEEEEEECCCSCCCCSSSCEEEEEESSTTHHHHHHHHHHHHHT------CCSCEEEEEE
T ss_pred HHHhcCC----------CCCEEEEEcCccccccCccCCceEEEEEeccCHHHHHHHHHHHHhcC------CCceEEEEEE
Confidence 9986543 47899999999998655445689999999999999999999998752 2468999999
Q ss_pred eCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHHHhcc-CCCCeeEEcCcchHHHHHHHH
Q 005126 464 IKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRF-GTQSNYAVNGLESLIWMAALV 542 (713)
Q Consensus 464 ~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~vcGp~~~~~~a~~~ 542 (713)
+|+.+|+.+.+++.+. .+. ..+++++.++|++++.+.+.+|++++... +.... .++..+|+|||++|++...-.
T Consensus 154 ~r~~~~~~~~~el~~l-~~~---~~~~~~~~~~s~~~~~~~g~~g~v~~~l~-~~~~~~~~~~~vyvCGp~~m~~~v~~~ 228 (250)
T 1tvc_A 154 VNTEPELFYIDELKSL-ERS---MRNLTVKACVWHPSGDWEGEQGSPIDALR-EDLESSDANPDIYLCGPPGMIDAACEL 228 (250)
T ss_dssp CSSSTTCCCHHHHHHH-HHH---SSSCEEEECCSSCSSCCSSSSSSSSHHHH-HHHHHSSSSSEEEEESSHHHHHHHHHH
T ss_pred eCCHHHhhhHHHHHHH-HHh---CCCeEEEEEeccCCCCcCCccceehHHHH-hhhhcccCCcEEEEeCCHHHHHHHHHH
Confidence 9999999877776543 221 24688888899876555556777766543 32322 345689999999999877543
No 4
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=99.94 E-value=1e-25 Score=240.23 Aligned_cols=218 Identities=15% Similarity=0.169 Sum_probs=160.0
Q ss_pred eeEEEEEEec-----CCeEEEEEecCCCCccCCCeEEEEeCCCCC------CcceeeeeeeeCCCC---CCCcEEEEEEe
Q 005126 312 TCILSARVFP-----SKAIELILPKHAGLKFTPTSVIFMKIPSIS------KFQWHSFSITSSSSV---DDQTMSLIVKC 377 (713)
Q Consensus 312 ~~ivs~~~l~-----~~~v~l~l~~~~~~~~~pGQ~v~L~~P~~s------~~q~HPFTIaS~p~~---~~~~l~~~Ik~ 377 (713)
.++++.+.++ ++++++++..+..+.|+||||++|.+|..+ ..++|||||+|+|.. +++.++|+||.
T Consensus 31 ~~V~~~~~~t~~~~~~~v~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~ 110 (311)
T 3lo8_A 31 ATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVRR 110 (311)
T ss_dssp EEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEEEEC
T ss_pred EEEEeeEeccCCCCCCccEEEEEeCCCCCcccCCCEEEEeCCCCccccCCCCCCceeeEecCCCcccCCCCCEEEEEEEE
Confidence 5677888888 899999999887899999999999999752 358999999999863 24789999996
Q ss_pred C---------------CchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCCCCc--CCCCeEEEEEecCChhhHHHHH
Q 005126 378 D---------------GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDF--LRYDSLLLVAGGIGITPFLSIL 440 (713)
Q Consensus 378 ~---------------G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~--~~~~~vvlIAGGiGITP~lsil 440 (713)
. |.+|+.|.+ ++ .|..+.|+||||.+.... ..+++++|||||+||||+++++
T Consensus 111 ~~~~~~~~~~~~~~~~G~~S~~L~~-l~----------~Gd~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l 179 (311)
T 3lo8_A 111 AVYYDPETGKEDPSKNGVCSNFLCN-SK----------PGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYL 179 (311)
T ss_dssp CCCCCTTTCCCCGGGSCHHHHHHHT-CC----------TTCEEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHHH
T ss_pred EEecccccCcCCcCCCCchhhHHhc-CC----------CcCEEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHHH
Confidence 4 889999976 22 478899999999875332 3678999999999999999999
Q ss_pred HHHHHhhccCCCCCCceEEEEEEeCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHH--H
Q 005126 441 QEIASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVR--A 518 (713)
Q Consensus 441 ~~l~~~~~~~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~--~ 518 (713)
+++..+.. ......++++|+|++|+.+++.+.+++.+...+ ...+++++.++|++++.+.+.++.+.+..... .
T Consensus 180 ~~~~~~~~-~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~~~---~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~ 255 (311)
T 3lo8_A 180 RRMFMEDV-PNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQ---YPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDE 255 (311)
T ss_dssp HHHHTEEC-TTCCCCSEEEEEEEESSGGGCSSHHHHHHHHHH---CTTTEEEEEEETTTC-------CCHHHHHHHTHHH
T ss_pred HHHHHhcc-ccccCCCCEEEEEecCChHHhhHHHHHHHHHHh---CCCcEEEEEEECCCCcccCCCcceehHHHHHHHHH
Confidence 99886531 111123689999999999999888887654322 12378999999998765444444443322211 1
Q ss_pred h-c-cCCCCeeEEcCcchHHHHHHHHHH
Q 005126 519 V-R-FGTQSNYAVNGLESLIWMAALVGI 544 (713)
Q Consensus 519 ~-~-~~~~~~~~vcGp~~~~~~a~~~~~ 544 (713)
+ . ..+...+|+|||++|+....-.+.
T Consensus 256 ~~~~~~~~~~vyvCGp~~m~~~v~~~L~ 283 (311)
T 3lo8_A 256 IFKLLDGGAHIYFCGLKGMMPGIQDTLK 283 (311)
T ss_dssp HHHHHHTTCEEEEEECGGGHHHHHHHHH
T ss_pred HHHhhcCCcEEEEECCHHHHHHHHHHHH
Confidence 1 1 124578999999999987755433
No 5
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=99.94 E-value=1.6e-25 Score=238.75 Aligned_cols=217 Identities=17% Similarity=0.209 Sum_probs=160.9
Q ss_pred eeEEEEEEecCC-----eEEEEEecCCCCccCCCeEEEEeCCCCC----CcceeeeeeeeCCCC---CCCcEEEEEEeC-
Q 005126 312 TCILSARVFPSK-----AIELILPKHAGLKFTPTSVIFMKIPSIS----KFQWHSFSITSSSSV---DDQTMSLIVKCD- 378 (713)
Q Consensus 312 ~~ivs~~~l~~~-----~v~l~l~~~~~~~~~pGQ~v~L~~P~~s----~~q~HPFTIaS~p~~---~~~~l~~~Ik~~- 378 (713)
..+++.+.++++ +.++++..+..++|+||||++|.+|... ++++|||||+|+|.. +++.++|+||..
T Consensus 36 ~~V~~~~~l~~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~ 115 (310)
T 3vo2_A 36 GRCLSNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLV 115 (310)
T ss_dssp EEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSCBCCCEEEECCSCTTTTTTSSSEEEEEEECCE
T ss_pred EEEEEEEEccCCCCCccEEEEEEeCCCCCcccCCCEEEEECCCcCCCCCcCcceeeecCCCCcccCCCCCEEEEEEEEEE
Confidence 456777777665 9999998877789999999999998753 347999999999853 367899999974
Q ss_pred ----------CchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCCC-CcCCCCeEEEEEecCChhhHHHHHHHHHHhh
Q 005126 379 ----------GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATM-DFLRYDSLLLVAGGIGITPFLSILQEIASAQ 447 (713)
Q Consensus 379 ----------G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~-~~~~~~~vvlIAGGiGITP~lsil~~l~~~~ 447 (713)
|.+|+.|.+ ++ .|+++.|+||||.+.. +...+++++|||||+||||++++++++..+.
T Consensus 116 ~~~~~~~~~~G~~S~~L~~-l~----------~Gd~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~ 184 (310)
T 3vo2_A 116 YTNDQGEIVKGVCSNFLCD-LK----------PGADVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEE 184 (310)
T ss_dssp EECTTSCEEECHHHHHHHT-CC----------TTCEEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSSC
T ss_pred eccCCCCcCCcchhhHHhc-CC----------CCCEEEEEeccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHhh
Confidence 889999976 22 5788999999998643 3346789999999999999999999998642
Q ss_pred ccCCCCCCceEEEEEEeCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHH--Hh--cc-C
Q 005126 448 SNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVR--AV--RF-G 522 (713)
Q Consensus 448 ~~~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~--~~--~~-~ 522 (713)
. ......+++.|+|++|+.+++.+.+++.+...+ ...++++++++|++++.+.+.++.+.+..... .+ .. .
T Consensus 185 ~-~~~~~~~~v~L~~g~r~~~d~~~~~el~~l~~~---~~~~~~v~~~~sr~~~~~~g~~~~v~~~l~~~~~~l~~~l~~ 260 (310)
T 3vo2_A 185 H-EDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEM---APDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKK 260 (310)
T ss_dssp C-TTCCCCSEEEEEEEESSGGGCCSHHHHHHHHHH---CTTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHHTS
T ss_pred c-ccccCCCcEEEEEEecChhhcccHHHHHHHHHh---CCCCEEEEEEECCCCCCCCCcceehHHHHHHHHHHHHHhccc
Confidence 1 111224789999999999999888887653322 12379999999998765544444333322211 11 11 2
Q ss_pred CCCeeEEcCcchHHHHHHHHH
Q 005126 523 TQSNYAVNGLESLIWMAALVG 543 (713)
Q Consensus 523 ~~~~~~vcGp~~~~~~a~~~~ 543 (713)
++..+|+|||++|+....-++
T Consensus 261 ~~~~vyvCGp~~M~~~v~~~L 281 (310)
T 3vo2_A 261 DNTYVYMCGLKGMEKGIDDIM 281 (310)
T ss_dssp TTEEEEEEESTTHHHHHHHHH
T ss_pred CCcEEEEeCCHHHHHHHHHHH
Confidence 357899999999998775543
No 6
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.94 E-value=1.5e-25 Score=230.10 Aligned_cols=211 Identities=12% Similarity=0.139 Sum_probs=162.8
Q ss_pred ceeEEEEEEecCCeEEEEEecCC---CCccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC--CchhHHH
Q 005126 311 ETCILSARVFPSKAIELILPKHA---GLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSL 385 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~---~~~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~--G~~T~~L 385 (713)
...+++.+.+++++.++++..+. ...++||||+.|.+|..+..++||||++|.|. +++.++++||.. |.+|+.|
T Consensus 13 ~~~v~~~~~~t~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~g~~~~R~ysi~s~~~-~~~~~~l~vk~~~~G~~S~~l 91 (243)
T 2eix_A 13 KFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDGKEIYRPYTPVSSDD-EKGYFDLIIKVYEKGQMSQYI 91 (243)
T ss_dssp EEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTT-CCSEEEEEEECCTTCHHHHHH
T ss_pred EEEEEEEEEeCCCeEEEEEEcCCCCcccCcCCceEEEEEEeeCCCEEEeeeeecCCCC-CCCEEEEEEEEcCCCCcchHh
Confidence 35677888888999888887553 46899999999999865556899999999875 567899999995 8899988
Q ss_pred HHHHHhcccCCCCCCcceeEEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeC
Q 005126 386 YQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIK 465 (713)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r 465 (713)
.+ ++ .|+++.|+||||.+..+...+++++|||||+||||++++++++..+. ...++++|+|++|
T Consensus 92 ~~-l~----------~Gd~v~v~gP~G~f~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~-----~~~~~v~l~~~~r 155 (243)
T 2eix_A 92 DH-LN----------PGDFLQVRGPKGQFDYKPNMVKEMGMIAGGTGITPMLQVARAIIKNP-----KEKTIINLIFANV 155 (243)
T ss_dssp HT-CC----------TTCEEEEEEEECSCCCCTTSSSEEEEEEEGGGHHHHHHHHHHHHTCT-----TCCCEEEEEEEEE
T ss_pred hc-CC----------CCCEEEEECCeEEEEeCCCCCcEEEEEecCccHHHHHHHHHHHHhCC-----CCCcEEEEEEEcC
Confidence 53 21 47889999999997655455789999999999999999999997631 1247899999999
Q ss_pred CcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHHHhccC-CCCeeEEcCcchHHHHHHHH
Q 005126 466 SSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFG-TQSNYAVNGLESLIWMAALV 542 (713)
Q Consensus 466 ~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~vcGp~~~~~~a~~~ 542 (713)
+.+|+.+.+++.+.. +. ..+++++..++++++.+.+.+|++++..+.+..... ++..+|+|||++|++...-.
T Consensus 156 ~~~~~~~~~el~~l~-~~---~~~~~~~~~~s~~~~~~~g~~g~v~~~~l~~~~~~~~~~~~vy~CGp~~m~~~v~~~ 229 (243)
T 2eix_A 156 NEDDILLRTELDDMA-KK---YSNFKVYYVLNNPPAGWTGGVGFVSADMIKQHFSPPSSDIKVMMCGPPMMNKAMQGH 229 (243)
T ss_dssp EGGGCTTHHHHHHHH-HH---CTTEEEEEEEEECCTTCCSEESSCCHHHHHHHSCCTTSSEEEEEESSHHHHHHHHHH
T ss_pred CHHHhhHHHHHHHHH-HH---CCCeEEEEEeCCCCccccCcCCccCHHHHHHhcCCCCCCeEEEEECCHHHHHHHHHH
Confidence 999998877765432 21 237899999998765555567777765444444332 34579999999999876543
No 7
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.93 E-value=5.8e-26 Score=237.12 Aligned_cols=208 Identities=20% Similarity=0.232 Sum_probs=154.5
Q ss_pred ceeEEEEEEecCCeEEEEEecCCCCccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC--CchhHHHHHH
Q 005126 311 ETCILSARVFPSKAIELILPKHAGLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSLYQM 388 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~~~~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~--G~~T~~L~~~ 388 (713)
..++++.+.+++++.+++++.+..+.++||||++|++|..+..++|||||+|.|. ++.++++||.. |.+|+.|.+
T Consensus 21 ~~~V~~~~~~~~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~--~~~~~~~v~~~~~G~~s~~l~~- 97 (271)
T 4fk8_A 21 TATVLSVHHWTDTLFSFTCTRDQALRFNNGEFTMVGLEVDGKPLTRAYSIVSPNY--EEHLEFFSIKVQNGPLTSRLQH- 97 (271)
T ss_dssp EEEEEEEEEEETTEEEEEECCCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTT--SSSEEEEEECCTTCTTHHHHTT-
T ss_pred eEEEEEEEEcCCCEEEEEEEcCCCCCcCCCCEEEEEccCCCceeeeeEeccCCCC--CCcEEEEEEEECCCchhhHHhc-
Confidence 4567888888999999999887788999999999999976677899999999874 56899999986 999998843
Q ss_pred HHhcccCCCCCCcceeEEEE-CCCCCCCCCc-CCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCC
Q 005126 389 IHAELDSDADQMRCIPVAIE-GPYGPATMDF-LRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKS 466 (713)
Q Consensus 389 ~~~~~~~~~~~~~~~~v~Ve-GPYG~~~~~~-~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~ 466 (713)
+ ..|+++.|+ ||||.+..+. ..+++++|||||+||||++++++++..+. ..++++++|++|+
T Consensus 98 l----------~~Gd~v~v~~gP~G~~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~------~~~~v~l~~~~r~ 161 (271)
T 4fk8_A 98 L----------KVGDPVLIGKKPTGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYE------RFDKVVLTHTCRL 161 (271)
T ss_dssp C----------CTTCEEEEESCCBCSCCGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHH------HCSEEEEEECCCS
T ss_pred C----------CCCCEEEEecCCCcceecCCcCCCCeEEEEECCEEHHHHHHHHHHHHhcC------CCCCEEEEEecCC
Confidence 2 257899999 9999986543 36899999999999999999999987653 2368999999999
Q ss_pred cchhhhHHhHhHHhhhccCCC------ccEEEEEEEeCCCCCccchhhhccchhHHH----Hhc----cCCCCeeEEcCc
Q 005126 467 SQEICLLNSISPLLSNQQSKK------WHLTLKVFVTQEEQSSVTVREVLNDLSLVR----AVR----FGTQSNYAVNGL 532 (713)
Q Consensus 467 ~~~l~~~~~l~~~l~~~~~~~------~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~----~~~----~~~~~~~~vcGp 532 (713)
.+|+.+.+++.+...+ . .. .+++++..+++++. +.+|++++....+ ... ..++..+|+|||
T Consensus 162 ~~~~~~~~el~~l~~~-~-~~~~~~~~~~~~~~~~~s~~~~---~~~G~v~~~~~~~~l~~~~~~~~~~~~~~~v~vCGp 236 (271)
T 4fk8_A 162 KGELAYMDYIKHDLPG-H-EYLGDVIREKLVYYPTVTREEF---ENEGRITDLIASGKLFTDLDMPPFSPEQDRVMLCGS 236 (271)
T ss_dssp HHHHHHHHHHHTCCTT-C-TTHHHHHHHHEEEEECC----------CCHHHHHHHHSHHHHHTTCCCCCTTTEEEEEEEC
T ss_pred HHHHhHHHHHHHHHHh-C-ccccccccceEEEEEEecCCcc---ccccccChHHhcchhhhhcccccCCCCCCEEEEECC
Confidence 9999887776542211 0 00 25777777776543 2345555443221 111 123467999999
Q ss_pred chHHHHHHHH
Q 005126 533 ESLIWMAALV 542 (713)
Q Consensus 533 ~~~~~~a~~~ 542 (713)
++|++...-.
T Consensus 237 ~~m~~~v~~~ 246 (271)
T 4fk8_A 237 TAMLKDTTEL 246 (271)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887543
No 8
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.93 E-value=6.1e-25 Score=226.16 Aligned_cols=208 Identities=14% Similarity=0.175 Sum_probs=155.7
Q ss_pred ceeEEEEEEecCCeEEEEEecCCCCccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC--CchhHHHHHH
Q 005126 311 ETCILSARVFPSKAIELILPKHAGLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSLYQM 388 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~~~~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~--G~~T~~L~~~ 388 (713)
..++++.+.+++++.++++. ++.+.++||||+.|.+|..+..++|||||+|.|. ++.++++||.. |.+|+.|.+
T Consensus 6 ~~~V~~~~~~~~~~~~l~l~-~~~~~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~--~~~l~~~v~~~~~G~~s~~l~~- 81 (248)
T 1fdr_A 6 TGKVTKVQNWTDALFSLTVH-APVLPFTAGQFTKLGLEIDGERVQRAYSYVNSPD--NPDLEFYLVTVPDGKLSPRLAA- 81 (248)
T ss_dssp EEEEEEEEECSSSEEEEEEE-CCCCCCCTTCEEEEEECC---CEEEEEECCSCTT--CSSEEEEEECCTTCSSHHHHHT-
T ss_pred EEEEEEEEEcCCCEEEEEEe-CCCCCcCCCCcEEEEccCCCCeeeeeecccCCCC--CCcEEEEEEEeCCCchhhHHHh-
Confidence 35677788889999999996 4568899999999999976667899999999885 37899999986 999999863
Q ss_pred HHhcccCCCCCCcceeEEEE-CCCCCCCCCcC-CCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCC
Q 005126 389 IHAELDSDADQMRCIPVAIE-GPYGPATMDFL-RYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKS 466 (713)
Q Consensus 389 ~~~~~~~~~~~~~~~~v~Ve-GPYG~~~~~~~-~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~ 466 (713)
++ .|+++.|+ ||||.+..+.. ++++++|||||+||||++++++++...+ ..++++|+|++|+
T Consensus 82 l~----------~Gd~v~v~~gP~G~f~l~~~~~~~~~vliagG~GitP~~~~l~~l~~~~------~~~~v~l~~~~r~ 145 (248)
T 1fdr_A 82 LK----------PGDEVQVVSEAAGFFVLDEVPHCETLWMLATGTAIGPYLSILRLGKDLD------RFKNLVLVHAARY 145 (248)
T ss_dssp CC----------TTCEEEEESSCBCCCSGGGSCCCSEEEEEEEGGGGHHHHHHHHHCCSCT------TCSEEEEEEEESS
T ss_pred CC----------CcCEEEEecCCcceeEcCCCCCCceEEEEEecccHHHHHHHHHHHHhhC------CCCcEEEEEEcCC
Confidence 22 57889999 99999754433 3789999999999999999999875431 2478999999999
Q ss_pred cchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHHH----hc--c-CCCCeeEEcCcchHHHHH
Q 005126 467 SQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRA----VR--F-GTQSNYAVNGLESLIWMA 539 (713)
Q Consensus 467 ~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~----~~--~-~~~~~~~vcGp~~~~~~a 539 (713)
.+++.+.+++.+.. +. ...+++++..+|+++.. .+.+|++++....+. .. . .++..+|+|||++|++..
T Consensus 146 ~~~~~~~~el~~l~-~~--~~~~~~~~~~~s~~~~~-~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~vy~CGp~~m~~~v 221 (248)
T 1fdr_A 146 AADLSYLPLMQELE-KR--YEGKLRIQTVVSRETAA-GSLTGRIPALIESGELESTIGLPMNKETSHVMLCGNPQMVRDT 221 (248)
T ss_dssp GGGCTTHHHHHHHH-HH--TTTSEEEEEEESSSCCT-TEEESCHHHHHHTSHHHHHHTSCCCTTTEEEEEEECHHHHHHH
T ss_pred HHHhhHHHHHHHHH-Hh--CcCcEEEEEEEecCCCC-CCcceeeChHHHhhhHHHhhccCCCccCCEEEEeCCHHHHHHH
Confidence 99998877775432 21 12478899899987643 223455554432211 11 1 234679999999999877
Q ss_pred HHH
Q 005126 540 ALV 542 (713)
Q Consensus 540 ~~~ 542 (713)
.-.
T Consensus 222 ~~~ 224 (248)
T 1fdr_A 222 QQL 224 (248)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 9
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=99.93 E-value=5e-25 Score=235.47 Aligned_cols=214 Identities=14% Similarity=0.203 Sum_probs=157.1
Q ss_pred eeEEEEEEec-----CCeEEEEEecCCCCccCCCeEEEEeCCCCC----------------------------------C
Q 005126 312 TCILSARVFP-----SKAIELILPKHAGLKFTPTSVIFMKIPSIS----------------------------------K 352 (713)
Q Consensus 312 ~~ivs~~~l~-----~~~v~l~l~~~~~~~~~pGQ~v~L~~P~~s----------------------------------~ 352 (713)
.++++.+.+. +++.+|++..+..++|.||||+.|..|..+ .
T Consensus 18 ~~v~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~GQ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~g~ 97 (316)
T 3jqq_A 18 CKIVDKINLVRPNSPNEVYHLEINHNGLFKYLEGHTCGIIPYYNELDNNPNNQINKDHNIINTTNHTNHNNIALSHIKKQ 97 (316)
T ss_dssp EEEEEEEECSCTTCSCCEEEEEEECTTCCCCCTTCEEEECTTCC-----------------------------------C
T ss_pred EEEEeeEEccCCCCCCceEEEEEeCCCCcceecCcEeEEECCCcccccccccccccccccccccccccccccccccCCCc
Confidence 3566776664 789999999887899999999999998753 4
Q ss_pred cceeeeeeeeCCCCCCCcEEEEEEeC--------------CchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCCCCc
Q 005126 353 FQWHSFSITSSSSVDDQTMSLIVKCD--------------GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDF 418 (713)
Q Consensus 353 ~q~HPFTIaS~p~~~~~~l~~~Ik~~--------------G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~ 418 (713)
.++|||||+|+|. ++.++|+||.. |.+|+.|.+ ++ .|+++.|+||||.+..+.
T Consensus 98 ~~~R~ySIaS~p~--~~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~-l~----------~Gd~v~v~gP~G~f~l~~ 164 (316)
T 3jqq_A 98 RCARLYSISSSNN--MENLSVAIKIHKYEQTENAPNITNYGYCSGFIKN-LK----------INDDIYLTGAHGYFNLPN 164 (316)
T ss_dssp CCCEEEEBCSCTT--SSSEEEEEECCBC---------CCBCHHHHHHHT-CC----------TTCEEEEEEEECCCCCCT
T ss_pred ccceeeecccCCC--CCeEEEEEEEEEecccccccCcCCCCchhHHHhh-CC----------CCCEEEEEecCCceEcCC
Confidence 6899999999985 36899999964 889999843 22 478899999999976553
Q ss_pred C---CCCeEEEEEecCChhhHHHHHHHHHHhhcc----CCCCCCceEEEEEEeCCcchhhhHHhHhHHhhhccCCCccEE
Q 005126 419 L---RYDSLLLVAGGIGITPFLSILQEIASAQSN----RKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLT 491 (713)
Q Consensus 419 ~---~~~~vvlIAGGiGITP~lsil~~l~~~~~~----~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~ 491 (713)
. ..+++||||||+||||++|+++++..+... ......++++|+|++|+.+++.+.+++.+.. +. ...+++
T Consensus 165 ~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~eL~~l~-~~--~~~~~~ 241 (316)
T 3jqq_A 165 DAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYFQ-KM--YPNNIN 241 (316)
T ss_dssp THHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGGGCTTHHHHHHHH-HH--CTTTEE
T ss_pred cccCCCCcEEEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCHHHhhcHHHHHHHH-Hh--CCCcEE
Confidence 3 378999999999999999999999865321 0111347899999999999997777765533 22 123789
Q ss_pred EEEEEeCCCCCccchhhhccchhHHHHhc----c-CCCCeeEEcCcchHHHHHHHH
Q 005126 492 LKVFVTQEEQSSVTVREVLNDLSLVRAVR----F-GTQSNYAVNGLESLIWMAALV 542 (713)
Q Consensus 492 i~iyvTr~~~~~~~~~g~~~~~~~~~~~~----~-~~~~~~~vcGp~~~~~~a~~~ 542 (713)
+++++|++++ +.+.++++.+....+... . .++..+|+|||++|+..+.-+
T Consensus 242 ~~~~~s~~~~-~~g~~g~V~~~l~~~~~~~~~~l~~~~~~vyvCGP~~m~~~v~~~ 296 (316)
T 3jqq_A 242 IHYVFSYKQN-SDATSFYVQDEIYKRKTEFLNLFNNYKCELYICGKKSIRYKVMDI 296 (316)
T ss_dssp EEEEEGGGCC----CBCCHHHHHHHTHHHHHHHHHHTCCEEEEEECSTHHHHHHHH
T ss_pred EEEEECCCcc-cCCCccchhHHHHHhHHHHHHhhccCCeEEEEeCCHHHHHHHHHH
Confidence 9999999853 333444444433222111 1 245789999999999877543
No 10
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.93 E-value=6.8e-25 Score=236.47 Aligned_cols=205 Identities=16% Similarity=0.253 Sum_probs=159.8
Q ss_pred ceeEEEEEEecCCeEEEEEecCC---CCccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC--CchhHHH
Q 005126 311 ETCILSARVFPSKAIELILPKHA---GLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSL 385 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~---~~~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~--G~~T~~L 385 (713)
..++++.+.+++++.++++..+. ...|+||||+.|.+|.. .++|||||+|.|. ++.++|+||.. |.+|++|
T Consensus 110 ~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~--~~~l~~~vk~~~~G~~S~~L 185 (338)
T 1krh_A 110 EGTLARVENLSDSTITFDIQLDDGQPDIHFLAGQYVNVTLPGT--TETRSYSFSSQPG--NRLTGFVVRNVPQGKMSEYL 185 (338)
T ss_dssp EEEEEEEEESSSSEEEEEEEECTTCCCCCCCTTCEEEEECTTS--SCEEEEECCSCTT--CSEEEEEEECCTTCHHHHHH
T ss_pred EEEEEEEEEcCCCEEEEEEEeCCCCCCCCcCCCCeEEEEcCCC--CccccccccCCCC--CCeEEEEEEEcCCCCchhhH
Confidence 35677788889999999998765 57899999999999864 4899999999885 67899999997 8899999
Q ss_pred HHHHHhcccCCCCCCcceeEEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeC
Q 005126 386 YQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIK 465 (713)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r 465 (713)
++.++ .|+++.|+||||.+..+.. .++++|||||+||||++++++++..++ ..++++|+|++|
T Consensus 186 ~~~l~----------~Gd~v~v~gP~G~f~~~~~-~~~~vliagGtGiaP~~s~l~~l~~~~------~~~~v~l~~~~r 248 (338)
T 1krh_A 186 SVQAK----------AGDKMSFTGPFGSFYLRDV-KRPVLMLAGGTGIAPFLSMLQVLEQKG------SEHPVRLVFGVT 248 (338)
T ss_dssp HTTCC----------TTCEEEEEEEECSCSCCCC-SSCEEEEEEGGGHHHHHHHHHHHHHHC------CSSCEEEEEEES
T ss_pred hhccC----------CCCEEEEECCccceEeCCC-CceEEEEEccccHhHHHHHHHHHHHcC------CCCeEEEEEEeC
Confidence 75433 5788999999999865433 489999999999999999999998753 246899999999
Q ss_pred CcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHHHhccCCCCeeEEcCcchHHHHHHHH
Q 005126 466 SSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALV 542 (713)
Q Consensus 466 ~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~a~~~ 542 (713)
+.+|+.+.+++.+.. + +..+++++.+++++++++. .+|++++....+.... .+..+|+|||++|++.+.-.
T Consensus 249 ~~~d~~~~~el~~l~-~---~~~~~~~~~~~s~~~~~~~-~~g~v~~~l~~~~~~~-~~~~vy~CGp~~m~~~v~~~ 319 (338)
T 1krh_A 249 QDCDLVALEQLDALQ-Q---KLPWFEYRTVVAHAESQHE-RKGYVTGHIEYDWLNG-GEVDVYLCGPVPMVEAVRSW 319 (338)
T ss_dssp SGGGCCCHHHHHHHH-H---HCTTEEEEEEETTCCSSSS-EESCSGGGCCGGGGGG-GCSEEEEEEEHHHHHHHHHH
T ss_pred CHHHhhhHHHHHHHH-H---hCCCeEEEEEEecCCCCCC-ccCccCHHHHHhhccc-CCcEEEEECCHHHHHHHHHH
Confidence 999998777765432 2 1247899999998766543 4566665433222222 34679999999999877543
No 11
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.92 E-value=7.1e-25 Score=229.28 Aligned_cols=207 Identities=15% Similarity=0.212 Sum_probs=159.1
Q ss_pred eeEEEEEEecCCeEEEEEecCC---CCccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC----------
Q 005126 312 TCILSARVFPSKAIELILPKHA---GLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD---------- 378 (713)
Q Consensus 312 ~~ivs~~~l~~~~v~l~l~~~~---~~~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~---------- 378 (713)
.++++.+.+++++.++++..+. ...|+||||+.|.+|..+..++|||||+|+|. +++.++++||..
T Consensus 19 ~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~-~~~~~~l~vk~~~~~~~~~~~~ 97 (275)
T 1umk_A 19 LRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDD-DKGFVDLVIKVYFKDTHPKFPA 97 (275)
T ss_dssp EEEEEEEECSSSEEEEEEECSSTTCBCCCCTTCEEEEEEEETTEEEEEEECCSSCTT-CCSEEEEEEECCCSSSBTTBTT
T ss_pred EEEEEEEEcCCCeEEEEEEcCCcccccCCCCCcEEEEEEeeCCcEEEeccccCCccC-CCCeEEEEEEEeccCcccccCC
Confidence 5677888889999888887543 36899999999999866677999999999875 567999999986
Q ss_pred -CchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCCCC------c----------CCCCeEEEEEecCChhhHHHHHH
Q 005126 379 -GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMD------F----------LRYDSLLLVAGGIGITPFLSILQ 441 (713)
Q Consensus 379 -G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~------~----------~~~~~vvlIAGGiGITP~lsil~ 441 (713)
|.+|+.|.+ ++ .|+.+.|+||||.+..+ + ...++++|||||+||||++++++
T Consensus 98 ~G~~S~~L~~-l~----------~Gd~v~v~gP~G~~~~~~~~~f~l~~~~~~~~~~~~~~~~vliagGtGIaP~~~~l~ 166 (275)
T 1umk_A 98 GGKMSQYLES-MQ----------IGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIR 166 (275)
T ss_dssp CCHHHHHHHH-CC----------TTCEEEEEEEECSEEEEETTEEEECSSTTSCCEEEECSEEEEEEEGGGHHHHHHHHH
T ss_pred CChhHHHHhc-CC----------CCCEEEEEcCccceEecCCccccccccccccccccCCceEEEEecCccHhHHHHHHH
Confidence 899999953 22 47889999999986321 1 25789999999999999999999
Q ss_pred HHHHhhccCCCCCCceEEEEEEeCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHHHhcc
Q 005126 442 EIASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRF 521 (713)
Q Consensus 442 ~l~~~~~~~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~~ 521 (713)
++..+. ...++++|+|++|+.+|+.+.+++.+.. +.. ..+++++..++++++.+.+.+|++++..+.+.+..
T Consensus 167 ~l~~~~-----~~~~~v~l~~~~r~~~d~~~~~el~~l~-~~~--~~~~~~~~~~s~~~~~~~~~~g~v~~~~l~~~l~~ 238 (275)
T 1umk_A 167 AIMKDP-----DDHTVCHLLFANQTEKDILLRPELEELR-NKH--SARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPP 238 (275)
T ss_dssp HHHTCT-----TCCCEEEEEEEESSGGGCTTHHHHHHHH-HHC--TTTEEEEEEESSCCSSCSSEESSCCHHHHHHHSCC
T ss_pred HHHhCC-----CCCcEEEEEEEcCCHHHhhHHHHHHHHH-HhC--cCcEEEEEEEcCCCccccCccCccCHHHHHHhcCC
Confidence 987641 1347899999999999998888775532 221 12678877778776555566788886554444433
Q ss_pred C-CCCeeEEcCcchHHHH
Q 005126 522 G-TQSNYAVNGLESLIWM 538 (713)
Q Consensus 522 ~-~~~~~~vcGp~~~~~~ 538 (713)
. ++..+|+|||++|+..
T Consensus 239 ~~~~~~vyvCGp~~m~~~ 256 (275)
T 1umk_A 239 PEEEPLVLMCGPPPMIQY 256 (275)
T ss_dssp GGGCCEEEEESCHHHHHH
T ss_pred CCCCeEEEEECCHHHHHH
Confidence 2 3467999999999983
No 12
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.92 E-value=1.5e-24 Score=228.45 Aligned_cols=210 Identities=15% Similarity=0.233 Sum_probs=159.4
Q ss_pred ceeEEEEEEecCCeEEEEEecCC--CCccCCCeEEEEeCCCC-----------------------------CCcceeeee
Q 005126 311 ETCILSARVFPSKAIELILPKHA--GLKFTPTSVIFMKIPSI-----------------------------SKFQWHSFS 359 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~--~~~~~pGQ~v~L~~P~~-----------------------------s~~q~HPFT 359 (713)
..++++.+.+++++.++++..+. .+.++||||+.|.+|.. ...++||||
T Consensus 11 ~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~pGQ~v~l~~p~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~R~yS 90 (290)
T 2r6h_A 11 ECEVLSNKNVSTFIKEFVVKLPEGETMNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKMDAWSLTCKNEEETVRAYS 90 (290)
T ss_dssp EEEEEEEEESSSSEEEEEEECSTTCCCCCCTTCEEEEEECSEEEEGGGCCCCTTTHHHHHHTTGGGCEEEECSCEEEEEE
T ss_pred EEEEEEeeecCCCeEEEEEEcCCCCccccCCCceEEEEcccccccccccccchhhcccccccccccccccCCCCcceeee
Confidence 35677888889999999998764 57899999999999852 346899999
Q ss_pred eeeCCCCCCCcEEEEEEe-----------------CCchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCCCCcCCCC
Q 005126 360 ITSSSSVDDQTMSLIVKC-----------------DGEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYD 422 (713)
Q Consensus 360 IaS~p~~~~~~l~~~Ik~-----------------~G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~~~~~ 422 (713)
|+|+|. +++.++|+||. .|.+|+.|.+ ++ .|+++.|+||||.+..+ ..++
T Consensus 91 i~s~~~-~~~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~-l~----------~Gd~v~v~gP~G~f~~~-~~~~ 157 (290)
T 2r6h_A 91 MANYPA-EGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFS-LK----------PGDKVMMSGPYGDFHIQ-DTDA 157 (290)
T ss_dssp CCSCTT-CCSEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTT-CC----------TTCEEEEEEEECCCCCC-SSSC
T ss_pred ccCCCC-CCCEEEEEEEEeccccccccccccccCCCcchhhHHhc-CC----------CCCEEEEEecccCCcCC-CCCC
Confidence 999986 56789999996 5778998876 22 47889999999998643 4678
Q ss_pred eEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCC-
Q 005126 423 SLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQ- 501 (713)
Q Consensus 423 ~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~- 501 (713)
+++|||||+||||+++++++++.+.. ..++++|+|++|+.+|+.+.+++.+.. +. ..+++++..+++++.
T Consensus 158 ~~vliagGtGitP~~s~l~~~~~~~~-----~~~~v~l~~~~r~~~d~~~~~el~~l~-~~---~~~~~~~~~~s~~~~~ 228 (290)
T 2r6h_A 158 EMLYIGGGAGMAPLRAQILHLFRTLK-----TGRKVSYWYGARSKNEIFYEEDFREIE-RE---FPNFKFHIALSDPQPE 228 (290)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHTSC-----CCSCEEEEEEESSGGGCCSHHHHHHHH-HH---CTTEEEEEEESSCCGG
T ss_pred eEEEEECccCHHHHHHHHHHHHHhcC-----CCCcEEEEEEcCCHHHHHHHHHHHHHH-Hh---CCCeEEEEEEccCCcc
Confidence 99999999999999999999886421 247899999999999998877775432 21 246899999998642
Q ss_pred -CccchhhhccchhHHHHhcc---CCCCeeEEcCcchHHHHHHHH
Q 005126 502 -SSVTVREVLNDLSLVRAVRF---GTQSNYAVNGLESLIWMAALV 542 (713)
Q Consensus 502 -~~~~~~g~~~~~~~~~~~~~---~~~~~~~vcGp~~~~~~a~~~ 542 (713)
.+.+.+|++++....+.+.. .++..+|+|||++|+....-.
T Consensus 229 ~~~~g~~g~v~~~~~~~~l~~~~~~~~~~vyvCGp~~m~~~v~~~ 273 (290)
T 2r6h_A 229 DNWTGYVGFIHQVIYDNYLKDHDAPEDIEYYMCGPGPMANAVKGM 273 (290)
T ss_dssp GCCCSCBSCHHHHHHHHTTTTCSCGGGEEEEEECCHHHHHHHHHH
T ss_pred cCCCCeeEecCHHHHHhHHhhccCcCCcEEEEECCHHHHHHHHHH
Confidence 23344666665443333221 123579999999999876543
No 13
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=99.92 E-value=7.8e-24 Score=225.91 Aligned_cols=216 Identities=15% Similarity=0.204 Sum_probs=157.4
Q ss_pred eeEEEEEEecC-----CeEEEEEecCCCCccCCCeEEEEeCCCC----CCcceeeeeeeeCCCC---CCCcEEEEEEe--
Q 005126 312 TCILSARVFPS-----KAIELILPKHAGLKFTPTSVIFMKIPSI----SKFQWHSFSITSSSSV---DDQTMSLIVKC-- 377 (713)
Q Consensus 312 ~~ivs~~~l~~-----~~v~l~l~~~~~~~~~pGQ~v~L~~P~~----s~~q~HPFTIaS~p~~---~~~~l~~~Ik~-- 377 (713)
.++++.+.+++ ++.++++..+..+.|+||||+.|.+|.. .+.++|||||+|+|.. +++.++|+||.
T Consensus 40 ~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~~ 119 (314)
T 1fnb_A 40 GRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKPHKLRLYSIASSALGDFGDAKSVSLCVKRLI 119 (314)
T ss_dssp EEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSSBCCCEEEECCSCSSCTTSSSCEEEEEEECCE
T ss_pred EEEEEEEEecCCCCCCcEEEEEEecCCCCCcCCCCEEEEecCCCCcCCCcCCceeEecCCCCcccCCCCCEEEEEEEEEE
Confidence 46677777765 8999999877668999999999999864 2468999999999853 25789999996
Q ss_pred ---------CCchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCCC-CcCCCCeEEEEEecCChhhHHHHHHHHHHhh
Q 005126 378 ---------DGEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATM-DFLRYDSLLLVAGGIGITPFLSILQEIASAQ 447 (713)
Q Consensus 378 ---------~G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~-~~~~~~~vvlIAGGiGITP~lsil~~l~~~~ 447 (713)
.|.+|+.|.+ ++ .|+.+.|+||||.+.. +-...+++||||||+||||++++++++..+.
T Consensus 120 y~~~~g~~~~G~~S~~L~~-l~----------~Gd~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~ 188 (314)
T 1fnb_A 120 YTNDAGETIKGVCSNFLCD-LK----------PGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEK 188 (314)
T ss_dssp EECTTSCEEECHHHHHHHH-CC----------TTCEEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTCC
T ss_pred eccCCCCcCCCchhhHhhc-CC----------CCCEEEEEeccCCceeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHhc
Confidence 3888999987 22 4788999999998642 3234789999999999999999999987642
Q ss_pred ccCCCCCCceEEEEEEeCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHH--HHh--ccC-
Q 005126 448 SNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLV--RAV--RFG- 522 (713)
Q Consensus 448 ~~~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~--~~~--~~~- 522 (713)
.. ......+++|+|++|+.+|+.+.+++.+... . ...+++++..+|++++.+.+.++.+++.... +.+ ...
T Consensus 189 ~~-~~~~~~~v~L~~g~R~~~d~~~~~el~~l~~-~--~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~ 264 (314)
T 1fnb_A 189 HD-DYKFNGLAWLFLGVPTSSSLLYKEEFEKMKE-K--APDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKK 264 (314)
T ss_dssp BT-TBCCCSEEEEEEEESSGGGCCSHHHHHHHHH-H--CTTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHTTS
T ss_pred cc-cccCCCCEEEEEecCCHHHhhhHHHHHHHHH-h--CCCcEEEEEEECCCCcccCCCceechHHHHHhHHHHHHHHhc
Confidence 11 1112468999999999999988887755332 1 1236899999998865443334443332211 111 122
Q ss_pred CCCeeEEcCcchHHHHHHHH
Q 005126 523 TQSNYAVNGLESLIWMAALV 542 (713)
Q Consensus 523 ~~~~~~vcGp~~~~~~a~~~ 542 (713)
++..+|+|||++|+....-.
T Consensus 265 ~~~~vyvCGp~~m~~~v~~~ 284 (314)
T 1fnb_A 265 DNTYVYMCGLKGMEKGIDDI 284 (314)
T ss_dssp TTEEEEEEECTTHHHHHHHH
T ss_pred CCeEEEEECCHHHHHHHHHH
Confidence 35679999999999876544
No 14
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.92 E-value=4.9e-24 Score=235.02 Aligned_cols=201 Identities=16% Similarity=0.189 Sum_probs=157.5
Q ss_pred ceeEEEEEEecCCeEEEEEecCC--CC-----ccCCCeEEEEeC--C--CCCCcceeeeeeeeCCCCCCCcEEEEEEe--
Q 005126 311 ETCILSARVFPSKAIELILPKHA--GL-----KFTPTSVIFMKI--P--SISKFQWHSFSITSSSSVDDQTMSLIVKC-- 377 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~--~~-----~~~pGQ~v~L~~--P--~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~-- 377 (713)
..++++.+..++++.++++..+. .+ .|+||||+.|++ | +....++|||||+|.|+ +++++|+||.
T Consensus 151 ~~~V~~~~~~s~~i~~~~l~~~~~~~~~l~~~~~~pGQ~v~l~~~~~~~~~~~~~~R~ySi~s~p~--~~~~~i~Vk~~~ 228 (399)
T 4g1v_A 151 PFEITAKEYVASDIVEFTVKPKFGSGIELESLPITPGQYITVNTHPIRQENQYDALRHYSLCSAST--KNGLRFAVKMEA 228 (399)
T ss_dssp EEEEEEEEEEETTEEEEEEEECTTSCCCGGGCCCCTTCEEEEEECCCSTTCCSCEEEEEEBSCSCC--TTCEEEEEECCC
T ss_pred EEEEEEEEEcCCCeEEEEEEcCCCCcCCcCCCCCCCCCEEEEEEeCCCCCCccceeeeecccCCCC--CCeEEEEEEecc
Confidence 45778888889999999997654 33 799999999997 4 44457899999999984 5789999998
Q ss_pred ------CCchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCCCCcC----CCCeEEEEEecCChhhHHHHHHHHHHhh
Q 005126 378 ------DGEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFL----RYDSLLLVAGGIGITPFLSILQEIASAQ 447 (713)
Q Consensus 378 ------~G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~~----~~~~vvlIAGGiGITP~lsil~~l~~~~ 447 (713)
.|.+|+.|++.++ +|+++.|+||||.+..+.. .+++++|||||+||||++|+++++..++
T Consensus 229 ~~~~~~~G~~S~~L~~~l~----------~Gd~v~v~gP~G~f~l~~~~~~~~~~~~vlIagG~GitP~~s~l~~l~~~~ 298 (399)
T 4g1v_A 229 ARENFPAGLVSEYLHKDAK----------VGDEIKLSAPAGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKCN 298 (399)
T ss_dssp CBTTBCCCHHHHHHHHTCC----------TTCEEEEEEEECSCCCCTTTTTCSSSCEEEEEEGGGHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCEehhHHHhCCC----------CCCEEEEEecccceeeCcccccCCCCCEEEEecceeHhHHHHHHHHHHHcC
Confidence 6779999986543 5789999999999866544 5789999999999999999999998763
Q ss_pred ccCCCCCCceEEEEEEeCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHHHhccCCCCee
Q 005126 448 SNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNY 527 (713)
Q Consensus 448 ~~~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 527 (713)
..++++++|++|+.+++.+.+++.+... +..++++++++++++ |+++...+.+... ++..+
T Consensus 299 ------~~~~v~l~~~~r~~~~~~~~~el~~l~~----~~~~~~~~~~~s~~~-------g~~~~~~l~~~~~--~~~~v 359 (399)
T 4g1v_A 299 ------PNRPIYWIQSSYDEKTQAFKKHVDELLA----ECANVDKIIVHTDTE-------PLINAAFLKEKSP--AHADV 359 (399)
T ss_dssp ------TTSCEEEEEEESSSTTSTTHHHHHHHHT----TCSSEEEEEEETTTS-------CCCCHHHHHHHSC--SSCEE
T ss_pred ------CCCCEEEEEecCCHHHhhhHHHHHHHHH----hCCCcEEEEEEeCCC-------CcccHHHHHhhCC--CCCEE
Confidence 2478999999999999988887755322 335789999988764 4455433333322 26789
Q ss_pred EEcCcchHHHHHHHH
Q 005126 528 AVNGLESLIWMAALV 542 (713)
Q Consensus 528 ~vcGp~~~~~~a~~~ 542 (713)
|+|||++|++...-.
T Consensus 360 yvCGp~~m~~~v~~~ 374 (399)
T 4g1v_A 360 YTCGSLAFMQAMIGH 374 (399)
T ss_dssp EEEECHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHH
Confidence 999999999877543
No 15
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.92 E-value=3.7e-24 Score=223.17 Aligned_cols=210 Identities=18% Similarity=0.222 Sum_probs=156.8
Q ss_pred ceeEEEEEEecCCeEEEEEecCC---CCccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC---------
Q 005126 311 ETCILSARVFPSKAIELILPKHA---GLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--------- 378 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~---~~~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~--------- 378 (713)
...+++.+.+++++.++++..+. .+.++||||++|.+|..+..++|||||+|+|. +++.++++||..
T Consensus 14 ~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~-~~~~~~l~vk~~~~~~~~~~~ 92 (270)
T 2cnd_A 14 HCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTSMVD-EIGHFDLLVKVYFKNEHPKFP 92 (270)
T ss_dssp EEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTT-CCSEEEEEEECCCSSCBTTBT
T ss_pred EEEEEEEEEeCCCeEEEEEECCCCccccCCCCCCEEEEEeeeCCcEEEEeeccCCCcc-CCCEEEEEEEEeccCcccccC
Confidence 35677888888999888887654 46799999999998766667899999999885 567899999973
Q ss_pred --CchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCC--------CCc--CCCCeEEEEEecCChhhHHHHHHHHHHh
Q 005126 379 --GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPAT--------MDF--LRYDSLLLVAGGIGITPFLSILQEIASA 446 (713)
Q Consensus 379 --G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~--------~~~--~~~~~vvlIAGGiGITP~lsil~~l~~~ 446 (713)
|.+|+.|.+ ++ .|+.+.|+||||.+. .+- ...++++|||||+||||++++++++..+
T Consensus 93 ~~G~~s~~l~~-l~----------~Gd~v~v~gP~G~~~~~~~g~f~l~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~ 161 (270)
T 2cnd_A 93 NGGLMTQYLDS-LP----------VGSYIDVKGPLGHVEYTGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRD 161 (270)
T ss_dssp TCCHHHHHHHH-CC----------TTCEEEEEEEECSEECCSSSCEEETTEEECCSEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred CCCchhhHHhc-CC----------CCCEEEEECCcccceeccccceeccCCcccCCEEEEEeccccHHHHHHHHHHHHhc
Confidence 779999853 22 478899999999732 111 2478999999999999999999999864
Q ss_pred hccCCCCCCceEEEEEEeCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCC---CCCccchhhhccchhHHHHhccCC
Q 005126 447 QSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQE---EQSSVTVREVLNDLSLVRAVRFGT 523 (713)
Q Consensus 447 ~~~~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~---~~~~~~~~g~~~~~~~~~~~~~~~ 523 (713)
+. ...++++|+|++|+.+|+.+.+++.+... .. ..+++++..++++ ++.+.+.+|++++..+.+.+...+
T Consensus 162 ~~----~~~~~v~l~~~~r~~~d~~~~~el~~l~~-~~--~~~~~~~~~~s~~~~~~~~~~~~~g~v~~~~l~~~l~~~~ 234 (270)
T 2cnd_A 162 QP----EDHTEMHLVYANRTEDDILLRDELDRWAA-EY--PDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGG 234 (270)
T ss_dssp TT----TCCCEEEEEEEESCGGGCTTHHHHHHHHH-HC--TTTEEEEEEESCCSCGGGCCCSEESSCCHHHHHHHSCCCS
T ss_pred CC----CCCcEEEEEEEcCCHHHcchHHHHHHHHH-HC--cCcEEEEEEECCCCCCCCCcccccccCCHHHHHHhcCCCc
Confidence 21 12478999999999999988887755332 21 1367888777773 223334577887755444433322
Q ss_pred -CCeeEEcCcchHHHHH
Q 005126 524 -QSNYAVNGLESLIWMA 539 (713)
Q Consensus 524 -~~~~~vcGp~~~~~~a 539 (713)
...+|+|||++|++.+
T Consensus 235 ~~~~vyvCGp~~m~~~~ 251 (270)
T 2cnd_A 235 DDTLALACGPPPMIQFA 251 (270)
T ss_dssp SSEEEEEECCHHHHHTT
T ss_pred CCEEEEEECCHHHHHHH
Confidence 3568999999999854
No 16
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.92 E-value=2.1e-24 Score=223.61 Aligned_cols=209 Identities=19% Similarity=0.258 Sum_probs=157.0
Q ss_pred ceeEEEEEEecCCeEEEEEecCCCCccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC--CchhHHHHHH
Q 005126 311 ETCILSARVFPSKAIELILPKHAGLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSLYQM 388 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~~~~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~--G~~T~~L~~~ 388 (713)
..++++.+.+++++.+++++.+..+.++||||+.|.+|..+..++|||||+|.|. ++.++++||.. |.+|+.|.+
T Consensus 5 ~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~--~~~~~~~i~~~~~G~~s~~l~~- 81 (257)
T 2qdx_A 5 TERVLSVHHWNDTLFSFKTTRNPGLRFKTGQFVMIGLEVDGRPLMRAYSIASPNY--EEHLEFFSIKVPDGPLTSRLQH- 81 (257)
T ss_dssp EEEEEEEEEEETTEEEEEEECCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTT--SSEEEEEEECCTTCTTHHHHTT-
T ss_pred EEEEEEEEEcCCCeEEEEEeCCCCCccCCCCEEEEEecCCCCceeeeeEeecCCC--CCeEEEEEEEeCCCcchhHHHh-
Confidence 3567788888899999999887778999999999999876667899999999885 37899999986 889998853
Q ss_pred HHhcccCCCCCCcceeEEEE-CCCCCCCCCcC-CCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCC
Q 005126 389 IHAELDSDADQMRCIPVAIE-GPYGPATMDFL-RYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKS 466 (713)
Q Consensus 389 ~~~~~~~~~~~~~~~~v~Ve-GPYG~~~~~~~-~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~ 466 (713)
+ ..|+++.|+ ||||.+..+.. .+++++|||||+||||++++++++...+ ..++++|+|++|+
T Consensus 82 l----------~~Gd~v~v~~gp~G~f~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~------~~~~v~l~~~~r~ 145 (257)
T 2qdx_A 82 L----------KEGDELMVSRKPTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYE------RYEKVILVHGVRW 145 (257)
T ss_dssp C----------CTTCEEEECSCCBCSCCGGGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHH------HCSEEEEEEEESS
T ss_pred C----------CCCCEEEEecCCCCCccCCcccCCCeEEEEEeceEHHHHHHHHHHHHhcC------CCCeEEEEEEcCC
Confidence 2 257889999 99998755433 3789999999999999999999987642 1368999999999
Q ss_pred cchhhhHHhHhHHhhhcc-C-C--CccEEEEEEEeCCCCCccchhhhccchhHHHH----hc---c-CCCCeeEEcCcch
Q 005126 467 SQEICLLNSISPLLSNQQ-S-K--KWHLTLKVFVTQEEQSSVTVREVLNDLSLVRA----VR---F-GTQSNYAVNGLES 534 (713)
Q Consensus 467 ~~~l~~~~~l~~~l~~~~-~-~--~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~----~~---~-~~~~~~~vcGp~~ 534 (713)
.+|+.+.+++.+.+.+.. . + ..+++++..+|+++. +.+|++++....+. .. . .++..+|+|||++
T Consensus 146 ~~~~~~~~el~~~l~~~~~~~~~~~~~~~~~~~~s~~~~---~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~~ 222 (257)
T 2qdx_A 146 VSELAYADFITKVLPEHEYFGDQVKEKLIYYPLVTREPF---RNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSPS 222 (257)
T ss_dssp GGGCTTHHHHHTTGGGCTTTHHHHHHHEEEEEEESSSCC---SSBSCHHHHHHHSHHHHHHTCCCCCTTTEEEEEEECHH
T ss_pred HHHhHhHHHHHHHHHhchhhhccCCCcEEEEEEecCCCc---ccCceechhhhhhhHHHhcccccCCcCCCEEEEECCHH
Confidence 999988877651232100 0 0 147888888888742 23445554332211 11 1 2346799999999
Q ss_pred HHHHHHH
Q 005126 535 LIWMAAL 541 (713)
Q Consensus 535 ~~~~a~~ 541 (713)
|++...-
T Consensus 223 m~~~v~~ 229 (257)
T 2qdx_A 223 MLEETSA 229 (257)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987754
No 17
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=99.92 E-value=9.8e-24 Score=224.02 Aligned_cols=216 Identities=17% Similarity=0.229 Sum_probs=154.1
Q ss_pred eeEEEEEEecC-----CeEEEEEecCC-CCccCCCeEEEEeCCCC----CCcceeeeeeeeCCCC---CCCcEEEEEEe-
Q 005126 312 TCILSARVFPS-----KAIELILPKHA-GLKFTPTSVIFMKIPSI----SKFQWHSFSITSSSSV---DDQTMSLIVKC- 377 (713)
Q Consensus 312 ~~ivs~~~l~~-----~~v~l~l~~~~-~~~~~pGQ~v~L~~P~~----s~~q~HPFTIaS~p~~---~~~~l~~~Ik~- 377 (713)
..+++.+.+++ ++.++++..+. .+.|+||||+.|.+|.. .++++|||||+|+|.. +++.++|+||.
T Consensus 24 ~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~~~~~~~~~~~l~l~Vk~~ 103 (304)
T 2bmw_A 24 GKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQL 103 (304)
T ss_dssp EEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBCTTSCBCCCEEEEBCSCTTTTTTSSSEEEEEEECC
T ss_pred EEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCcccCCCCCCcceecCCCCcccCCCCCEEEEEEEEE
Confidence 56777777876 89899887653 57899999999999864 2468999999998752 36789999997
Q ss_pred -----------CCchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCC-CCcCCCCeEEEEEecCChhhHHHHHHHHHH
Q 005126 378 -----------DGEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPAT-MDFLRYDSLLLVAGGIGITPFLSILQEIAS 445 (713)
Q Consensus 378 -----------~G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~-~~~~~~~~vvlIAGGiGITP~lsil~~l~~ 445 (713)
.|.+|+.|.+ ++ .|.++.|+||||.+. .+....+++||||||+||||++|++++++.
T Consensus 104 ~y~~~~~~~~~~G~~S~~L~~-l~----------~Gd~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~ 172 (304)
T 2bmw_A 104 EYKHPESGETVYGVCSTYLTH-IE----------PGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFK 172 (304)
T ss_dssp EECSSSSSSCEECHHHHHHHT-CC----------TTCEEEEEEEECSSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHHC
T ss_pred EeeccccCcCCCcchhhHHhc-CC----------CCCEEEEEeccCCceeCCCCCCCCEEEEecCccHHHHHHHHHHHHH
Confidence 5779999876 22 478899999999864 233357899999999999999999999876
Q ss_pred hhcc---CCCCCCceEEEEEEeCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccc----hhhhccchhHH-H
Q 005126 446 AQSN---RKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVT----VREVLNDLSLV-R 517 (713)
Q Consensus 446 ~~~~---~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~----~~g~~~~~~~~-~ 517 (713)
+..+ .......+++|+|++|+.+|+.+.+++.+...+ ...+++++..+|++++.+.+ .++.+.+.... .
T Consensus 173 ~~~~~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~v~~~l~~~~~~l~ 249 (304)
T 2bmw_A 173 DAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK---YPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLW 249 (304)
T ss_dssp HHHHHHCTTCCCCSCEEEEEEESSGGGCTTHHHHHHHHHH---CTTTEEEEEEETTTCBCTTSSBCCHHHHHHHTHHHHH
T ss_pred hhhhhcccccccCCCEEEEEEeCChHhcchHHHHHHHHHh---CCCcEEEEEEEcCCCCCCCCCcceehHHHHHhHHHHH
Confidence 5311 011123679999999999999887877553221 11378899999998644322 23333221100 0
Q ss_pred HhccCCCCeeEEcCcchHHHHHHH
Q 005126 518 AVRFGTQSNYAVNGLESLIWMAAL 541 (713)
Q Consensus 518 ~~~~~~~~~~~vcGp~~~~~~a~~ 541 (713)
.....++..+|+|||++|+....-
T Consensus 250 ~~~~~~~~~vyvCGp~~m~~~v~~ 273 (304)
T 2bmw_A 250 QLIKNQKTHTYICGPPPMEEGIDA 273 (304)
T ss_dssp HHHTSTTEEEEEEECTTHHHHHHH
T ss_pred HHhhcCCcEEEEECCHHHHHHHHH
Confidence 011123567999999999986643
No 18
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.92 E-value=4.3e-24 Score=235.16 Aligned_cols=208 Identities=15% Similarity=0.199 Sum_probs=160.1
Q ss_pred ceeEEEEEEecCCeEEEEEecCCC---CccCCCeEEEEeCCCCC--CcceeeeeeeeCCCCCCCcEEEEEEeC--CchhH
Q 005126 311 ETCILSARVFPSKAIELILPKHAG---LKFTPTSVIFMKIPSIS--KFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTS 383 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~~---~~~~pGQ~v~L~~P~~s--~~q~HPFTIaS~p~~~~~~l~~~Ik~~--G~~T~ 383 (713)
..++++.+.+++++.++++..+.+ ..|+||||+.|.+|..+ ..++|||||+|.|. +++++|+||.. |..|+
T Consensus 154 ~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~~G~~S~ 231 (396)
T 1gvh_A 154 DFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPD--GKGYRIAVKREEGGQVSN 231 (396)
T ss_dssp EEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEECCTTCSSCEEEEEECCSCCC--SSCEEEEEECCTTCHHHH
T ss_pred EEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCeEEEEecCCCCccceeecceeccCCC--CCeEEEEEEEcCCCcchH
Confidence 466788888899999999987542 58999999999998433 36899999999885 56899999997 99999
Q ss_pred HHHHHHHhcccCCCCCCcceeEEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEE
Q 005126 384 SLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYV 463 (713)
Q Consensus 384 ~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~ 463 (713)
.|++.++ .|+++.|.||||.+..+....++++|||||+||||++++++++..++ ..++++++|+
T Consensus 232 ~L~~~l~----------~Gd~v~v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~~------~~~~v~l~~~ 295 (396)
T 1gvh_A 232 WLHNHAN----------VGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAG------HTAQVNWFHA 295 (396)
T ss_dssp HHHHTCC----------TTCEEEEEEEECSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHHT------CCSCEEEEEE
T ss_pred HHHhcCC----------CCCEEEEEcCCcceECCCCCCCCEEEEecchhHhHHHHHHHHHHhcC------CCCcEEEEEE
Confidence 9987433 57899999999987654446789999999999999999999998753 2478999999
Q ss_pred eCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCc-----cchhhhccchhHHHHhccCCCCeeEEcCcchHHHH
Q 005126 464 IKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSS-----VTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWM 538 (713)
Q Consensus 464 ~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~ 538 (713)
+|+.+++.+.+++.+.. + +..+++++++++++++.+ ....|++++..+.+... .++..+|+|||++|++.
T Consensus 296 ~r~~~~~~~~~el~~l~-~---~~~~~~~~~~~s~~~~~~~~~~~~~~~G~~~~~~l~~~~~-~~~~~vyvCGp~~m~~~ 370 (396)
T 1gvh_A 296 AENGDVHAFADEVKELG-Q---SLPRFTAHTWYRQPSEADRAKGQFDSEGLMDLSKLEGAFS-DPTMQFYLCGPVGFMQF 370 (396)
T ss_dssp ESCTTTCCSHHHHHHHH-H---TSSSEEEEEEESSCCHHHHHHTCCSEESSCCGGGSSSCCC-CTTCEEEEESCHHHHHH
T ss_pred eCCHHHhhhHHHHHHHH-H---HCCCeEEEEEECCCCccccccCccCccCcCCHHHHhhccC-CCCCEEEEeCCHHHHHH
Confidence 99999998877765432 2 234789999998875432 12356666533222111 23578999999999987
Q ss_pred HHH
Q 005126 539 AAL 541 (713)
Q Consensus 539 a~~ 541 (713)
..-
T Consensus 371 v~~ 373 (396)
T 1gvh_A 371 TAK 373 (396)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 19
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=99.91 E-value=1.5e-23 Score=231.21 Aligned_cols=216 Identities=17% Similarity=0.221 Sum_probs=157.5
Q ss_pred eeEEEEEEecC-----CeEEEEEecCC-CCccCCCeEEEEeCCCC----CCcceeeeeeeeCCCC---CCCcEEEEEEe-
Q 005126 312 TCILSARVFPS-----KAIELILPKHA-GLKFTPTSVIFMKIPSI----SKFQWHSFSITSSSSV---DDQTMSLIVKC- 377 (713)
Q Consensus 312 ~~ivs~~~l~~-----~~v~l~l~~~~-~~~~~pGQ~v~L~~P~~----s~~q~HPFTIaS~p~~---~~~~l~~~Ik~- 377 (713)
..+++.+.+++ ++.++++..+. .+.|+||||+.|.+|.. .++++|||||+|+|.. +++.++|+||.
T Consensus 125 ~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySIas~p~~~~~~~~~l~l~Vk~~ 204 (402)
T 2b5o_A 125 GKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSLCVRQL 204 (402)
T ss_dssp EEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEETTTEECCCEEEEBCSCTTTTTTSSCEEEEEEECC
T ss_pred EEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCCcCCCccCceeeeccCCCccccCCCCEEEEEEEEe
Confidence 56777887877 89999998765 48899999999999863 2468999999999863 25789999997
Q ss_pred -----------CCchhHHHHHHHHhcccCCCCCCcc-eeEEEECCCCCCC-CCcCCCCeEEEEEecCChhhHHHHHHHHH
Q 005126 378 -----------DGEWTSSLYQMIHAELDSDADQMRC-IPVAIEGPYGPAT-MDFLRYDSLLLVAGGIGITPFLSILQEIA 444 (713)
Q Consensus 378 -----------~G~~T~~L~~~~~~~~~~~~~~~~~-~~v~VeGPYG~~~-~~~~~~~~vvlIAGGiGITP~lsil~~l~ 444 (713)
.|..|+.|.+ ++ .| +.+.|+||||.+. .+-...+++||||||+||||++++++++.
T Consensus 205 ~y~~~~~~~~~~G~~S~~L~~-l~----------~G~d~v~v~gP~G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~ 273 (402)
T 2b5o_A 205 EYQDPESGETVYGVCSTYLCN-LP----------VGTDDVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMF 273 (402)
T ss_dssp EEECTTTCCEEECHHHHHHHT-CC----------TTCCCEEEEEEECSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHH
T ss_pred eecccccCcCCCCchhHHHhh-CC----------CCCceEEEEcccCCcccCCccCCCCEEEEEcccCHHHHHHHHHHHH
Confidence 5888998876 22 47 7899999999864 23335689999999999999999999987
Q ss_pred HhhccCCCCCCceEEEEEEeCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHH--HHh--c
Q 005126 445 SAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLV--RAV--R 520 (713)
Q Consensus 445 ~~~~~~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~--~~~--~ 520 (713)
.+... .....++++|+|++|+.+|+.+.+++.+... . ...++++++.++++++.+.+.++.+.+.... +.+ .
T Consensus 274 ~~~~~-~~~~~~~v~L~~g~R~~~d~~~~~eL~~l~~-~--~~~~~~v~~~~S~~~~~~~g~~~~v~~~l~~~~~~l~~~ 349 (402)
T 2b5o_A 274 KEQHE-DYKFKGKAWLIFGVPYTANILYKDDFEKMAA-E--NPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEM 349 (402)
T ss_dssp TCCCS-SCCCCSEEEEEEEESSGGGCTTHHHHHHHHH-H--CTTTEEEEEEETTTCBCTTSCBCCHHHHHHHTHHHHHHH
T ss_pred Hhccc-cccccCCEEEEEecCCHHHhHHHHHHHHHHH-h--CCCcEEEEEEECCCCcccCCCccchHHHHHHhHHHHHHH
Confidence 64211 1112478999999999999988888765332 1 1237899999999865443333333322211 111 0
Q ss_pred c-CCCCeeEEcCcchHHHHHHHH
Q 005126 521 F-GTQSNYAVNGLESLIWMAALV 542 (713)
Q Consensus 521 ~-~~~~~~~vcGp~~~~~~a~~~ 542 (713)
. .++..+|+|||++|+....-.
T Consensus 350 l~~~~~~vyvCGP~~M~~~v~~~ 372 (402)
T 2b5o_A 350 IQKPNTHVYMCGLKGMQPPIDET 372 (402)
T ss_dssp HTSTTEEEEEEECGGGHHHHHHH
T ss_pred hccCCcEEEEECCHHHHHHHHHH
Confidence 1 235689999999999876544
No 20
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.91 E-value=6.2e-24 Score=222.08 Aligned_cols=209 Identities=18% Similarity=0.192 Sum_probs=156.6
Q ss_pred ceeEEEEEEecCCeEEEEEecCCCCccCCCeEEEEeCCCC-CCcceeeeeeeeCCCCCCCcEEEEEEeC--CchhHHHHH
Q 005126 311 ETCILSARVFPSKAIELILPKHAGLKFTPTSVIFMKIPSI-SKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSLYQ 387 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~~~~~~pGQ~v~L~~P~~-s~~q~HPFTIaS~p~~~~~~l~~~Ik~~--G~~T~~L~~ 387 (713)
..++++.+.+++++.++++..+..+.|+||||+.|.+|.. +..++|||||+|.|. ++.++++||.. |.+|+.|.+
T Consensus 18 ~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~--~~~~~l~v~~~~~G~~s~~l~~ 95 (272)
T 2bgi_A 18 AQTVTSVRHWTDTLFSFRVTRPQTLRFRSGEFVMIGLLDDNGKPIMRAYSIASPAW--DEELEFYSIKVPDGPLTSRLQH 95 (272)
T ss_dssp EEEEEEEEEEETTEEEEEEECCTTCCCCTTCEEEEEEECTTSCEEEEEEECCSCTT--CSEEEEEEECCTTCTTHHHHTT
T ss_pred EEEEEEEEEcCCCEEEEEEeCCCCCccCCCCEEEEEeccCCCCeeeeeeeeccCCC--CCeEEEEEEEccCCCchhHHHh
Confidence 3567788888899999999887778899999999999853 457899999999885 47899999986 899998853
Q ss_pred HHHhcccCCCCCCcceeEEEE-CCCCCCCCCcC-CCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeC
Q 005126 388 MIHAELDSDADQMRCIPVAIE-GPYGPATMDFL-RYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIK 465 (713)
Q Consensus 388 ~~~~~~~~~~~~~~~~~v~Ve-GPYG~~~~~~~-~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r 465 (713)
+ ..|+++.|+ ||||.+..+.. .+++++|||||+||||++++++++...+ ..++++|+|++|
T Consensus 96 -l----------~~Gd~v~v~~gP~G~f~~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~------~~~~v~l~~~~r 158 (272)
T 2bgi_A 96 -I----------KVGEQIILRPKPVGTLVIDALLPGKRLWFLATGTGIAPFASLMREPEAYE------KFDEVIMMHACR 158 (272)
T ss_dssp -C----------CTTCEEEEEEEEECSCCGGGBCCCSEEEEEEEGGGGHHHHHHTTCGGGGT------SCSEEEEEEEES
T ss_pred -C----------CCCCEEEEeeCCCCcccccccccCCeEEEEeecccHHHHHHHHHHHHhcC------CCCcEEEEEEeC
Confidence 2 257889999 99999765433 3789999999999999999999876532 247899999999
Q ss_pred CcchhhhHHhHhHHhhhc-c-CC--CccEEEEEEEeCCCCCccchhhhccchhHHH----Hh--c-c-CCCCeeEEcCcc
Q 005126 466 SSQEICLLNSISPLLSNQ-Q-SK--KWHLTLKVFVTQEEQSSVTVREVLNDLSLVR----AV--R-F-GTQSNYAVNGLE 533 (713)
Q Consensus 466 ~~~~l~~~~~l~~~l~~~-~-~~--~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~----~~--~-~-~~~~~~~vcGp~ 533 (713)
+.+|+.+.+++.+.+.+. . .+ ..+++++..+|+++. +.+|++++....+ .. . . .++..+|+|||+
T Consensus 159 ~~~~~~~~~el~~~l~~~~~~~~~~~~~~~~~~~~s~~~~---~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~ 235 (272)
T 2bgi_A 159 TVAELEYGRQLVEALQEDPLIGELVEGKLKYYPTTTREEF---HHMGRITDNLASGKVFEDLGIAPMNPETDRAMVCGSL 235 (272)
T ss_dssp SSGGGHHHHHHHHHHHHCTTTTTTSTTTEEEEEEESSSCC---SSBCCHHHHHHSCHHHHHHTCCCCCTTTEEEEEEECH
T ss_pred CHHHhhHHHHHHHHHHhcchhhcccCCcEEEEEEecCCcc---ccCceechHHHhhhHhhhcccccCCCCCcEEEEECCH
Confidence 999998888776233220 0 01 247888888888732 2345555433211 11 1 1 234679999999
Q ss_pred hHHHHHHH
Q 005126 534 SLIWMAAL 541 (713)
Q Consensus 534 ~~~~~a~~ 541 (713)
+|++...-
T Consensus 236 ~m~~~v~~ 243 (272)
T 2bgi_A 236 AFNVDVMK 243 (272)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987754
No 21
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.91 E-value=1.6e-23 Score=231.06 Aligned_cols=207 Identities=19% Similarity=0.273 Sum_probs=159.1
Q ss_pred ceeEEEEEEecCCeEEEEEecCCC---CccCCCeEEEEeCCC-CC-CcceeeeeeeeCCCCCCCcEEEEEEeC-------
Q 005126 311 ETCILSARVFPSKAIELILPKHAG---LKFTPTSVIFMKIPS-IS-KFQWHSFSITSSSSVDDQTMSLIVKCD------- 378 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~~---~~~~pGQ~v~L~~P~-~s-~~q~HPFTIaS~p~~~~~~l~~~Ik~~------- 378 (713)
..++++.+.+++++.++++..+.+ ..|+||||+.|.+|. .. ..++|||||+|.|. +++++|+||..
T Consensus 156 ~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~~~~~~~ 233 (403)
T 1cqx_A 156 TFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSLSDMPN--GRTYRISVKREGGGPQPP 233 (403)
T ss_dssp EEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEEEETTTTEEEEEEEECCSCCC--SSCEEEEEECCCBTTBCC
T ss_pred eEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCEEEEEEecCCCCcceeecceecCCCC--CCeEEEEEEECCCCCCCC
Confidence 456788888899999999986542 489999999999973 22 36899999999884 57899999986
Q ss_pred CchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceE
Q 005126 379 GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKV 458 (713)
Q Consensus 379 G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v 458 (713)
|..|+.|++.++ .|+.+.|.||+|.+..+....++++|||||+||||++++++++.. + ..+++
T Consensus 234 G~~S~~L~~~l~----------~Gd~v~v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~-~------~~~~v 296 (403)
T 1cqx_A 234 GYVSNLLHDHVN----------VGDQVKLAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQ-A------PPRQV 296 (403)
T ss_dssp CHHHHHHHHHCC----------TTCEEEECCCBCSCSCCTTCCSCEEEEESSCCHHHHHHHHHHHTC-S------SCCCE
T ss_pred CeehHHHhhCCC----------CCCEEEEecCccCcccCCCCCCCEEEEEecccHhhHHHHHHHHHh-C------CCCcE
Confidence 779999987543 578999999999876544567899999999999999999999875 1 24789
Q ss_pred EEEEEeCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCc-----cchhhhccchhHHHHhccCCCCeeEEcCcc
Q 005126 459 QLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSS-----VTVREVLNDLSLVRAVRFGTQSNYAVNGLE 533 (713)
Q Consensus 459 ~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~ 533 (713)
+++|++|+.+++.+.+++.+.. + +..+++++++++++++.+ ...+|++++..+.+.... ++..+|+|||+
T Consensus 297 ~l~~~~r~~~~~~~~~el~~l~-~---~~~~~~~~~~~s~~~~~~~~~~~~~~~G~i~~~~l~~~~~~-~~~~vyvCGp~ 371 (403)
T 1cqx_A 297 VFVHGARNSAVHAMRDRLREAA-K---TYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKSILL-PDADYYICGPI 371 (403)
T ss_dssp EEEEEESCSSSCHHHHHHHHHH-H---HCTTEEEEEEESSCCTTCCBTTTBSEESSCCGGGSHHHHCC-TTCEEEEESSH
T ss_pred EEEEEeCChhhCcHHHHHHHHH-H---hCCCcEEEEEECCCCcccccccccCcCCCcCHHHHhhccCC-CCCEEEEeCCH
Confidence 9999999999998877765432 2 124688998998875433 234567776444332222 36789999999
Q ss_pred hHHHHHHH
Q 005126 534 SLIWMAAL 541 (713)
Q Consensus 534 ~~~~~a~~ 541 (713)
+|++...-
T Consensus 372 ~m~~~v~~ 379 (403)
T 1cqx_A 372 PFMRMQHD 379 (403)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987644
No 22
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.90 E-value=1.8e-23 Score=217.44 Aligned_cols=196 Identities=18% Similarity=0.257 Sum_probs=147.2
Q ss_pred ceeEEEEEEecCCeEEEEEecCC-CCccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEe--CCchhHHHHH
Q 005126 311 ETCILSARVFPSKAIELILPKHA-GLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKC--DGEWTSSLYQ 387 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~-~~~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~--~G~~T~~L~~ 387 (713)
..++++.+.+++++.++++..+. ...|+||||+.|.+|..+..++|||||+|.|. +++.++|+||. .|..|+.|.+
T Consensus 7 ~~~V~~~~~~t~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~~~R~ySi~s~~~-~~~~l~~~vk~~~~G~~S~~l~~ 85 (262)
T 1ep3_B 7 MMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLHLAVPNGAMLLRRPISISSWDK-RAKTCTILYRIGDETTGTYKLSK 85 (262)
T ss_dssp EEEEEEEEEEETTEEEEEEESGGGGGCCSTTCEEEECCSCTTCCSCEEEECCEEET-TTTEEEEEEECCCTTSHHHHHHT
T ss_pred ceEEEEEEEecCCEEEEEEEcCcccccCCCCceEEEEcCCCCceeeEEEEeeeecC-CCCEEEEEEEEecCCchHHHHhc
Confidence 35677888889999999998765 35799999999999976567999999999885 56789999999 8999998863
Q ss_pred HHHhcccCCCCCCcceeEEEECCCCC-CCCCcC-CCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeC
Q 005126 388 MIHAELDSDADQMRCIPVAIEGPYGP-ATMDFL-RYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIK 465 (713)
Q Consensus 388 ~~~~~~~~~~~~~~~~~v~VeGPYG~-~~~~~~-~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r 465 (713)
++ +|+++.|+||||. +..+.. ..++++|||||+||||++++++++..++ ++++|+|++|
T Consensus 86 -l~----------~Gd~v~v~gP~G~~f~l~~~~~~~~~lliagGtGitP~~s~l~~l~~~~--------~~v~l~~~~r 146 (262)
T 1ep3_B 86 -LE----------SGAKVDVMGPLGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTG--------CQMTILLGFA 146 (262)
T ss_dssp -CC----------TTCEEEEEEEESBCCCCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHHT--------CEEEEEEEES
T ss_pred -CC----------CCCEEEEEcccCCCccCCCccCCCeEEEEECcCcHHHHHHHHHHHHHcC--------CeEEEEEEcC
Confidence 22 5788999999998 644332 3789999999999999999999998741 6799999999
Q ss_pred CcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHHHhccCCCCeeEEcCcchHHHHHH
Q 005126 466 SSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAA 540 (713)
Q Consensus 466 ~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~a~ 540 (713)
+.+|+.+.+++.+ +. . . ++++ .+++ + +.+.++++++ .+.+. ..+...+|+|||++|++...
T Consensus 147 ~~~~~~~~~el~~-l~----~--~-~~~~-~~~~-~-~~~~~g~v~~-~l~~~--~~~~~~vyvCGp~~m~~~v~ 207 (262)
T 1ep3_B 147 SENVKILENEFSN-LK----N--V-TLKI-ATDD-G-SYGTKGHVGM-LMNEI--DFEVDALYTCGAPAMLKAVA 207 (262)
T ss_dssp SGGGCCCHHHHHT-ST----T--E-EEEE-EETT-C-SSSEESCHHH-HHHHC--CSCCSEEEEESCHHHHHHHH
T ss_pred CHHHhhhHHHHhh-hc----c--C-cEEE-EECC-C-CCcceeehHH-HHHhh--ccCCCEEEEECCHHHHHHHH
Confidence 9999987777643 11 1 1 3332 2332 2 2234455554 22221 22346899999999998653
No 23
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=99.90 E-value=7.8e-23 Score=218.11 Aligned_cols=214 Identities=17% Similarity=0.264 Sum_probs=152.9
Q ss_pred eeEEEEEEecCC--------------eEEEEEecCCC-CccCCCeEEEEeCCCCC----C-------cceeeeeeeeCCC
Q 005126 312 TCILSARVFPSK--------------AIELILPKHAG-LKFTPTSVIFMKIPSIS----K-------FQWHSFSITSSSS 365 (713)
Q Consensus 312 ~~ivs~~~l~~~--------------~v~l~l~~~~~-~~~~pGQ~v~L~~P~~s----~-------~q~HPFTIaS~p~ 365 (713)
..+++.+.++++ +.++++..+.. +.|+||||+.|.+|... + +++|||||+|+|.
T Consensus 24 ~~V~~~~~lt~~~~~~~~~~~e~~~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~~~~~~~~R~ySi~s~p~ 103 (314)
T 2rc5_A 24 AKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPEKKAKGLADVGYTVRLYSIASPSY 103 (314)
T ss_dssp EEEEEEEECSCCTTSSSCCSSSCCCCEEEEEEECCTTTCCCCTTCEEEEECSSBCHHHHHTTCSCCBCCCEEEECCSCTT
T ss_pred EEEEEeEEcCCccccccccccccCceEEEEEEeCCCCcCcccCCCEEEEECCCCccccCccchhhcCCCceeeeccCCcc
Confidence 567788888766 88999987654 78999999999998752 2 5889999999885
Q ss_pred C---CCCcEEEEEEeC------------CchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCCC-Cc-CCCCeEEEEE
Q 005126 366 V---DDQTMSLIVKCD------------GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATM-DF-LRYDSLLLVA 428 (713)
Q Consensus 366 ~---~~~~l~~~Ik~~------------G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~-~~-~~~~~vvlIA 428 (713)
. +++.++|+||.. |.+|+.|.+ ++ .|+++.|+||||.+.. +- ...+++||||
T Consensus 104 ~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~-l~----------~Gd~v~v~gP~G~~~~~~~~~~~~~~vlIa 172 (314)
T 2rc5_A 104 SFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCD-LK----------PGDEVTMTGPSGKKFLLPNTDFSGDIMFLA 172 (314)
T ss_dssp CGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHT-CC----------TTCEEEEEEEECSSSCCCSSCBCSCEEEEE
T ss_pred ccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhc-CC----------CcCEEEEEeccCCceeCCCCCCCCCEEEEE
Confidence 2 367899999973 558999876 32 4788999999998643 22 3578999999
Q ss_pred ecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCc-cchh
Q 005126 429 GGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSS-VTVR 507 (713)
Q Consensus 429 GGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~-~~~~ 507 (713)
||+||||++++++++..+.. .....+++|+|++|+.+|+.+.+++.+... . ..+++++..+|++++.+ .+.+
T Consensus 173 gGtGIaP~~s~l~~l~~~~~---~~~~~~v~l~~g~r~~~d~~~~~el~~l~~-~---~~~~~~~~~~s~~~~~~~~g~~ 245 (314)
T 2rc5_A 173 TGTGIAPFIGMSEELLEHKL---IKFTGNITLVYGAPYSDELVMMDYLKGLES-K---HKNFKLITAISREEKNSFDGGR 245 (314)
T ss_dssp EGGGGHHHHHHHHHHHTTCS---SCBCSCEEEEEEESSGGGSCSHHHHHHHHH-H---HSSEEEEEEETTTCBCTTTSSB
T ss_pred CCccHHHHHHHHHHHHHhcc---cCCCCcEEEEEEeCCHHHHhHHHHHHHHHH-h---CCcEEEEEEECCCCCcccCCCc
Confidence 99999999999999876421 112367999999999999888777755322 1 13789999999885432 2223
Q ss_pred hhccchhHH--HHh-c-cCCCCeeEEc-CcchHHHHHHHHH
Q 005126 508 EVLNDLSLV--RAV-R-FGTQSNYAVN-GLESLIWMAALVG 543 (713)
Q Consensus 508 g~~~~~~~~--~~~-~-~~~~~~~~vc-Gp~~~~~~a~~~~ 543 (713)
+.+.+.... +.+ . ..+...+|+| ||++|+....-.+
T Consensus 246 ~~v~~~l~~~~~~l~~~~~~~~~~yvCGGp~~m~~~v~~~L 286 (314)
T 2rc5_A 246 MYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEI 286 (314)
T ss_dssp CCHHHHHHHTHHHHHHHHHHTCEEEEEESSTTTHHHHHHHH
T ss_pred eehhHHHHHhHHHHHHHhhcCCeEEEeCCcHHHHHHHHHHH
Confidence 333322211 011 0 1112334999 9999999876543
No 24
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.88 E-value=5.7e-22 Score=212.22 Aligned_cols=195 Identities=17% Similarity=0.256 Sum_probs=145.8
Q ss_pred ceeEEEEEEecCCeEEEEEecCCC---CccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC--Cc-hhHH
Q 005126 311 ETCILSARVFPSKAIELILPKHAG---LKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GE-WTSS 384 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~~---~~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~--G~-~T~~ 384 (713)
...+++.+.+++++.++++..+.+ ..|+||||+.|.+|.. ++|||||+|+|. +++.++|.||.. |. +|++
T Consensus 10 ~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~g---~~R~ySi~s~~~-~~~~l~i~Vk~~~~G~g~S~~ 85 (321)
T 2pia_A 10 RLKIASKEKIARDIWSFELTDPQGAPLPPFEAGANLTVAVPNG---SRRTYSLCNDSQ-ERNRYVIAVKRDSNGRGGSIS 85 (321)
T ss_dssp EEEEEEEEEEETTEEEEEEECTTCCCCCCCCTTCEEEEECTTS---CEEEEECCSCTT-CCSEEEEEEECCTTSCSHHHH
T ss_pred EEEEEEEEEcCCCEEEEEEEcCCCCcCCCCCCCCEEEEECCCC---CcEEEEeCCCCC-CCCeEEEEEEEecCCcchhHH
Confidence 356778888899999999987653 3799999999999863 899999999885 567899999974 65 8999
Q ss_pred HHHHHHhcccCCCCCCcceeEEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEe
Q 005126 385 LYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVI 464 (713)
Q Consensus 385 L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~ 464 (713)
|++.++ .|+.+.|+||||.+..+. .+++++|||||+||||++++++++..++ .++++|+|++
T Consensus 86 L~~~l~----------~Gd~v~v~gP~g~f~l~~-~~~~~vliagG~GItP~~s~l~~l~~~~-------~~~v~l~~~~ 147 (321)
T 2pia_A 86 FIDDTS----------EGDAVEVSLPRNEFPLDK-RAKSFILVAGGIGITPMLSMARQLRAEG-------LRSFRLYYLT 147 (321)
T ss_dssp HHHSCC----------TTCEEEECCCBCCSCCCT-TCSEEEEEEEGGGHHHHHHHHHHHHHHC-------SSEEEEEEEE
T ss_pred HHhcCC----------CCCEEEEeCCccccccCC-CCCCEEEEEecccHhHHHHHHHHHHHcC-------CCcEEEEEEE
Confidence 986443 578999999999886543 4789999999999999999999998752 2689999999
Q ss_pred CCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHHHhc-cCCCCeeEEcCcchHHHHHHHH
Q 005126 465 KSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVR-FGTQSNYAVNGLESLIWMAALV 542 (713)
Q Consensus 465 r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~vcGp~~~~~~a~~~ 542 (713)
|+.+++.+.+++.+. . ...++++ +.++++.. ++.+- .+.+. ..+...+|+|||++|++...-.
T Consensus 148 r~~~~~~~~~el~~l-~----~~~~~~~--~~~~~~~~-----g~~~~---~~ll~~~~~~~~vyvCGP~~m~~~v~~~ 211 (321)
T 2pia_A 148 RDPEGTAFFDELTSD-E----WRSDVKI--HHDHGDPT-----KAFDF---WSVFEKSKPAQHVYCCGPQALMDTVRDM 211 (321)
T ss_dssp SCGGGCTTHHHHHST-T----TTTTEEE--EECTTCTT-----SCCCH---HHHHSSCCTTEEEEEESCHHHHHHHHHH
T ss_pred CChhhhHHHHHHhcC-c----cCCeEEE--EECCCccc-----CccCH---HHHhcccCCCCEEEEECCHHHHHHHHHH
Confidence 999999888776432 1 1234544 34543211 11211 11111 2234679999999999877543
No 25
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.88 E-value=2.1e-22 Score=197.39 Aligned_cols=182 Identities=28% Similarity=0.544 Sum_probs=122.3
Q ss_pred EEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccC-CCCCCceEEEEEEeCCcchhhhHHhHhHHhhhc
Q 005126 405 VAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNR-KYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQ 483 (713)
Q Consensus 405 v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~-~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~ 483 (713)
|.|+||||.+..+..+++++||||||+||||++|+++++..+..+. .....++++|+|++|+.+++.|+.+.++.+.+.
T Consensus 1 v~v~GP~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~~~~~~~~v~l~~~~r~~~~~~w~~~~l~~l~~~ 80 (186)
T 3a1f_A 1 IAVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTHAFEWFADLLQLLESQ 80 (186)
T ss_dssp CCTTSTTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEEESCTTTTHHHHHHHHHHHHH
T ss_pred CeEECCCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEEECCcchHHHHHHHHHHHHHH
Confidence 3578999987655567899999999999999999999998753211 112358899999999999999555544444332
Q ss_pred c---CCCccEEEEEEEeCCCCCccchhhhccchhHHHHhccCCCCeeEEcCcchHHHHHHHHHHHHHHHHHHHHhhceEE
Q 005126 484 Q---SKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALVGITSILFVIFLISLNHIF 560 (713)
Q Consensus 484 ~---~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~a~~~~~s~~~f~~~~~~~~~~~ 560 (713)
. ....++++++++|+++++... . .+
T Consensus 81 ~~~~~~~~~~~~~~~~t~~~~~~~~--------------------~--------------------------------~~ 108 (186)
T 3a1f_A 81 MQERNNAGFLSYNIYLTGWDESQAN--------------------H--------------------------------FA 108 (186)
T ss_dssp HHHTTCTTSEEEEEEETTC-------------------------------------------------------------
T ss_pred HhhccCCCeEEEEEEEcCCCCCccc--------------------c--------------------------------ee
Confidence 1 112379999999986432100 0 00
Q ss_pred ecCCCCCccccccCCcccccccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhcCCCCCCcCCCcccccCCCccc
Q 005126 561 VPVEKKLPSEKLAAPSEKVVSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKKQTPPVSLNQGKAVQVLGPIEE 640 (713)
Q Consensus 561 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 640 (713)
++.+ + +. +. ..+..
T Consensus 109 ~~~~--~---------------~~------~~-----------------------------------------~~g~~-- 122 (186)
T 3a1f_A 109 VHHD--E---------------EK------DV-----------------------------------------ITGLK-- 122 (186)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccc--c---------------cc------cc-----------------------------------------CCCCc--
Confidence 0000 0 00 00 00100
Q ss_pred cccceecCCCChHHHHHHHHhhcCCceEEEEEeCchhhHHHHHHHHhhhhhhhhccCCCCCCceeeeccCc
Q 005126 641 EHEINFGGRPNFEEIFSELEKETAGSDIGVLVCGPESMKESVAKTSQRKSQCFMMNANKDKPYFNFHSLNF 711 (713)
Q Consensus 641 ~~~~h~g~RP~~~~i~~~~~~~~~~~~vGV~vCGP~~l~~~va~~c~~~~~~~~~~~~~~~~~f~fhs~sF 711 (713)
..+|+ ||||++++++++.+.+++.++.||+|||++|.++|++.|.+... ..+...+++||+|+|
T Consensus 123 -~~~~~-gR~~~~~~~~~~~~~~~~~~~~v~~CGP~~m~~~v~~~l~~~g~-----~~~~~~~~~~~~E~F 186 (186)
T 3a1f_A 123 -QKTLY-GRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSE-----SGPRGVHFIFNKENF 186 (186)
T ss_dssp -CCEEE-SCCCHHHHHHHHHHHSTTCEEEEEEESCHHHHHHHHHHHHHTCC-----CSTTCCEEEEECCCC
T ss_pred -ccccc-CCCCHHHHHHHHHHhCCCCcEEEEEeCCHHHHHHHHHHHHHhhc-----cCCCCCEEEEEeccC
Confidence 13677 69999999999887766678999999999999999999987331 012356799999998
No 26
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=99.80 E-value=1.2e-19 Score=197.86 Aligned_cols=183 Identities=14% Similarity=0.135 Sum_probs=136.7
Q ss_pred ccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC----------CchhHHHHHHHHhcccCCCCCCcceeE
Q 005126 336 KFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD----------GEWTSSLYQMIHAELDSDADQMRCIPV 405 (713)
Q Consensus 336 ~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~----------G~~T~~L~~~~~~~~~~~~~~~~~~~v 405 (713)
++.||||+.+..| .+.|||||+|+|..+++.++++||.. |..|+.|.+.++ .|.++
T Consensus 145 ~~~~Gq~v~l~~~----~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~G~~S~~L~~~l~----------~Gd~v 210 (374)
T 1ddg_A 145 QLDAEALINLLRP----LTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVE----------EEGEV 210 (374)
T ss_dssp CCCHHHHHHHSCB----CCCEEEEBCCCTTTSCSEEEEEEEECEEEETTEEEECHHHHHHHHSCC----------SSCEE
T ss_pred CCCHHHHHhhccC----CCCccceecCCCCCCCCEEEEEEEEEEeecCCCCCCCCchHHHHhcCC----------CCCEE
Confidence 7899999999765 48999999999864478999999975 889999987432 47789
Q ss_pred EEEC-CCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCc-chhhhHHhHhHHhhhc
Q 005126 406 AIEG-PYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSS-QEICLLNSISPLLSNQ 483 (713)
Q Consensus 406 ~VeG-PYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~~-~~l~~~~~l~~~l~~~ 483 (713)
.|.| |.|.+..+.+...+++|||||+||||++++++++...+ ...++.|+|++|+. +|+.+.+|+.+...
T Consensus 211 ~v~~~~~g~F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~~------~~~~~~L~~G~R~~~~d~ly~~El~~~~~-- 282 (374)
T 1ddg_A 211 RVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADE------APGKNWLFFGNPHFTEDFLYQVEWQRYVK-- 282 (374)
T ss_dssp EEEEECCTTSCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHT------CCSCEEEEEEESCHHHHCTTHHHHHHHHH--
T ss_pred EEEEeeCCCccCCCCCCCCEEEEECCccHHHHHHHHHHHHhcC------CCCCEEEEEEeCCchhhhhHHHHHHHHHH--
Confidence 9998 55677655455789999999999999999999988753 23679999999998 68878777755332
Q ss_pred cCCCccEEEEEEEeCCCCCccchhhhccchhHHHHhccCCCCeeEEcC-cchHHHHHHHH
Q 005126 484 QSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNG-LESLIWMAALV 542 (713)
Q Consensus 484 ~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcG-p~~~~~~a~~~ 542 (713)
+...++++...+|+++.....++++.+....-.....++..+|+|| |++|+....-+
T Consensus 283 --~~~~~~l~~a~Srd~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCG~p~~M~~~V~~~ 340 (374)
T 1ddg_A 283 --EGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQA 340 (374)
T ss_dssp --TTSCCEEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEECTTTHHHHHHHH
T ss_pred --hCCCcEEEEEEecCCCCCccHHHHHHHhHHHHHHHHhCCcEEEEECCCHHHHHHHHHH
Confidence 2235678888899876555556666543211111112357899999 88998876544
No 27
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.74 E-value=1.8e-17 Score=171.22 Aligned_cols=191 Identities=12% Similarity=0.095 Sum_probs=132.2
Q ss_pred ceeEEEEEEecCCeEEEEEecCCC--C-ccCCCeEEEEeCCC-CCCcceeeeeeeeCCCCCCCcEEEEEEeC---CchhH
Q 005126 311 ETCILSARVFPSKAIELILPKHAG--L-KFTPTSVIFMKIPS-ISKFQWHSFSITSSSSVDDQTMSLIVKCD---GEWTS 383 (713)
Q Consensus 311 ~~~ivs~~~l~~~~v~l~l~~~~~--~-~~~pGQ~v~L~~P~-~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~---G~~T~ 383 (713)
..++++.+.++.++.++++..+.. + .++||||+.|.+|. .....+|||||++.+. +.+++.++.. |..|+
T Consensus 10 ~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~---~~~~i~~~~~~~~G~~S~ 86 (252)
T 2gpj_A 10 ELEVIRSTYITPHMLRITLGGAGLAGFPADQESAYIKLLFPQAGERPLMRTYTIRQQRD---DEIDVDFVLHDTDGPASS 86 (252)
T ss_dssp EEEEEEEEEEETTEEEEEEESGGGTTCCSCCTTCEEEEEECCTTSCCEEEEEECCEEET---TEEEEEEECCSSCCHHHH
T ss_pred EEEEEEEEEcCCCEEEEEEEcCChhhcCCCCCCCeEEEEcccCCCCCCCCceeeeccCC---CEEEEEEEEeCCCCcHHH
Confidence 356778888899999999986542 3 47999999999985 3456899999999763 5677776653 77888
Q ss_pred HHHHHHHhcccCCCCCCcceeEEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEE
Q 005126 384 SLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYV 463 (713)
Q Consensus 384 ~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~ 463 (713)
.|.+ ++ +|+.+.|.||.|.+..+. ..++++|||||+||||+++|++++.. ..++++++.
T Consensus 87 ~l~~-l~----------~Gd~l~v~gP~G~f~l~~-~~~~~lliagGtGitPi~s~l~~l~~---------~~~~~~~~~ 145 (252)
T 2gpj_A 87 WAKT-AQ----------VGELIQIGGPGLKKLINF-EADWFLLAGDMTALPAISVNLAKLPN---------NAVGYAVIE 145 (252)
T ss_dssp HHHH-CC----------TTCEEEEEEEECCCCCCS-SSSEEEEEEEGGGHHHHHHHHHHSCT---------TCEEEEEEE
T ss_pred HHhh-CC----------CCCEEEEecCCCCCcCCC-CCceEEEEcchhhHHHHHHHHHhCCC---------CCcEEEEEE
Confidence 8853 32 689999999999876542 35789999999999999999998732 146788888
Q ss_pred eCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCCCccchhhhccchhHHHHhcc-CCCCeeEEcCcchHHHHHHH
Q 005126 464 IKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRF-GTQSNYAVNGLESLIWMAAL 541 (713)
Q Consensus 464 ~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~vcGp~~~~~~a~~ 541 (713)
+|+.+++..++ ...+++++...+.+.. ..+ ..+.+ . .+.... ..+..+|+|||++|++...-
T Consensus 146 ~~~~~d~~~l~-----------~~~~~~v~~~~~~~~~-~~g--~~~~~-~-l~~~~~~~~~~~vy~CGP~~m~~av~~ 208 (252)
T 2gpj_A 146 VLSEADIQPLV-----------HPEHVELHWVINPEAD-PEG--RPLVE-R-IAQLPWLAGEPAVWIACEFNSMRALRR 208 (252)
T ss_dssp ESSGGGCCCCC-----------CCTEEEEEEEECSSCC-TTC--HHHHH-H-HTTSCCCSSCEEEEEEEEHHHHHHHHH
T ss_pred ECCHHHhhccc-----------CCCCcEEEEEeCCCCC-ccc--HHHHH-H-HHhccCCCCCcEEEEEcCHHHHHHHHH
Confidence 99987764221 1235666654443322 101 01111 0 111111 12457999999999997754
No 28
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=99.72 E-value=2.1e-17 Score=181.20 Aligned_cols=183 Identities=17% Similarity=0.214 Sum_probs=124.1
Q ss_pred ccCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC------------CchhHHHHHHHHhcccCCCCCCcce
Q 005126 336 KFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD------------GEWTSSLYQMIHAELDSDADQMRCI 403 (713)
Q Consensus 336 ~~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~------------G~~T~~L~~~~~~~~~~~~~~~~~~ 403 (713)
+..++|++.+ +|. .+.|||||+|+|..+++.++++|+.. |..|+.|.+. + . ...+
T Consensus 156 ~~p~~~~l~~-lp~---l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~l-~------~--Gd~v 222 (393)
T 4dql_A 156 EMKFSEFIAL-LPS---IRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAEL-Q------E--GDTI 222 (393)
T ss_dssp CCCHHHHHHT-SCB---CCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHHC-C------T--TCEE
T ss_pred CCCHHHHHHh-CCC---CcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHhC-C------C--cCEE
Confidence 4456676654 444 48999999999975568899999875 7789998763 2 0 1234
Q ss_pred eEEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCC-cchhhhHHhHhHHhhh
Q 005126 404 PVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKS-SQEICLLNSISPLLSN 482 (713)
Q Consensus 404 ~v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~-~~~l~~~~~l~~~l~~ 482 (713)
++.|+||+|.+..+.....+++|||||+||||+++++++......++ ....++.|+|++|+ .+|+.+.+++.+.. +
T Consensus 223 ~v~v~~P~g~F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g--~~~~~v~L~~G~R~~~~d~ly~~el~~~~-~ 299 (393)
T 4dql_A 223 TCFISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQG--QSLGEAHLYFGCRSPHEDYLYQEELENAQ-S 299 (393)
T ss_dssp EEEEECCSSCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTT--CCCCCEEEEEEESCTTTCCTTHHHHHHHH-H
T ss_pred EEEEEcCCCCcccCccCCCCeEEEccCceechHHHHHHHHHHHHhcC--CCCCCEEEEEEECCcchhhHHHHHHHHHH-h
Confidence 45589999998766556679999999999999999999864321111 12367999999999 47887777765532 2
Q ss_pred ccCCCccEEEEEEEeCCCC-CccchhhhccchhHHHHhccCCCCeeEEcCcchHHHH
Q 005126 483 QQSKKWHLTLKVFVTQEEQ-SSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWM 538 (713)
Q Consensus 483 ~~~~~~~l~i~iyvTr~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~ 538 (713)
..++++++..+|+++ .....++.+.+....-.....++..+|+|||.++|..
T Consensus 300 ----~~~l~l~~a~Sr~~~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~ 352 (393)
T 4dql_A 300 ----EGIITLHTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYICGDGSQMAP 352 (393)
T ss_dssp ----TTSCEEEEEESSCTTSCCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHH
T ss_pred ----CCCeEEEEEEeCCCCCCCcchhhHHHhCHHHHHHHHhCCcEEEEECCchhhHH
Confidence 246788899998543 3333444443221111111234678999999765543
No 29
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=99.69 E-value=1.1e-16 Score=181.92 Aligned_cols=198 Identities=15% Similarity=0.155 Sum_probs=129.9
Q ss_pred CCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC-------------CchhHHHHHHHHhcccCCCCCCcce--
Q 005126 339 PTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD-------------GEWTSSLYQMIHAELDSDADQMRCI-- 403 (713)
Q Consensus 339 pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~-------------G~~T~~L~~~~~~~~~~~~~~~~~~-- 403 (713)
|+|++...+|.+ +.|||||+|+|..+++.++|+||.. |..|+.|.+.+.....+......|.
T Consensus 278 p~~~ll~~lp~l---~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~~~~~~~~~~Gd~~ 354 (539)
T 2qtl_A 278 PLSLLLEHLPKL---QPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSG 354 (539)
T ss_dssp CHHHHHHHSCBC---CCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTTC------------
T ss_pred CHHHHHHhCcCC---cceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhhccccccCCCCCcc
Confidence 556666666654 8999999999865578899999975 7789999987521110000012345
Q ss_pred -----eEEEECCCC-CCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCc-chhhhHHhH
Q 005126 404 -----PVAIEGPYG-PATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSS-QEICLLNSI 476 (713)
Q Consensus 404 -----~v~VeGPYG-~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~~-~~l~~~~~l 476 (713)
.|.|.||+| .+..+-....++||||||+|||||++++++......++......++.|+|++|+. +|+.+.+++
T Consensus 355 ~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~v~LffG~R~~~~D~ly~dEL 434 (539)
T 2qtl_A 355 KALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRKEL 434 (539)
T ss_dssp --CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEESCTTTCCTTHHHH
T ss_pred ccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhccccCCCCCEEEEEEECCcchhhHHHHHH
Confidence 899999997 6655544567899999999999999999996543211111134779999999999 688888887
Q ss_pred hHHhhhccCCCccEEEEEEEeCCCCC--ccchhhhccchhHHHHhc----c-CCCCeeEEcCcc-hHHHHHHHHH
Q 005126 477 SPLLSNQQSKKWHLTLKVFVTQEEQS--SVTVREVLNDLSLVRAVR----F-GTQSNYAVNGLE-SLIWMAALVG 543 (713)
Q Consensus 477 ~~~l~~~~~~~~~l~i~iyvTr~~~~--~~~~~g~~~~~~~~~~~~----~-~~~~~~~vcGp~-~~~~~a~~~~ 543 (713)
.+... +...+++++.++|+++. +.+.++++++....+... . .++..+|+|||+ +|+....-++
T Consensus 435 ~~~~~----~g~~~~l~~afSRd~~~~~~~g~k~yVqd~l~e~~~~l~~~l~~~~a~vYVCGp~~~M~~~V~~~L 505 (539)
T 2qtl_A 435 RHFLK----HGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKNMAKDVHDAL 505 (539)
T ss_dssp HHHHH----TTSSCEEEEEESSSCC------CCCSHHHHHHHTHHHHHHHHHHSCCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHH----hCCCcEEEEEEccCCCccccCCCccchhHHHHHhHHHHHHhhccCCcEEEEECCCHHHHHHHHHHH
Confidence 65432 23456888899998652 122344444332221111 1 235789999998 8888765543
No 30
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=99.67 E-value=5.3e-16 Score=172.35 Aligned_cols=175 Identities=18% Similarity=0.085 Sum_probs=121.4
Q ss_pred cceeeeeeeeCCCCCCCcEEEEEEeC-------------CchhHHHHHHHHhcccCCCCCCcceeEEEEC-CCCCCCCCc
Q 005126 353 FQWHSFSITSSSSVDDQTMSLIVKCD-------------GEWTSSLYQMIHAELDSDADQMRCIPVAIEG-PYGPATMDF 418 (713)
Q Consensus 353 ~q~HPFTIaS~p~~~~~~l~~~Ik~~-------------G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeG-PYG~~~~~~ 418 (713)
.+.|||||+|+|..+++.+++.|+.. |..|+.|.+. ..|..|.|.| |+|.+..+-
T Consensus 208 l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l-----------~~Gd~v~v~~~~~g~F~lp~ 276 (435)
T 1f20_A 208 LQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI-----------QADDVVPCFVRGAPSFHLPR 276 (435)
T ss_dssp CCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTC-----------CTTCEEEEEEECCTTSSCCS
T ss_pred CCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhC-----------CCCCEEEEEEecCCCccCCC
Confidence 38999999999874467899999853 6788888542 2478899999 677876554
Q ss_pred CCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcc-hhhhHHhHhHHhhhccCCCccEEEEEEEe
Q 005126 419 LRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQ-EICLLNSISPLLSNQQSKKWHLTLKVFVT 497 (713)
Q Consensus 419 ~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~~~-~l~~~~~l~~~l~~~~~~~~~l~i~iyvT 497 (713)
....++||||||+||||++++++++.....+. .....++.|+|++|+.+ |+.+.+|+.+... +...++++..+|
T Consensus 277 ~~~~piilIagGtGIAP~~s~l~~~~~~~~~~-~~~~~~~~L~~G~R~~~~d~ly~~El~~~~~----~~~~~~l~~a~S 351 (435)
T 1f20_A 277 NPQVPCILVGPGTGIAPFRSFWQQRQFDIQHK-GMNPCPMVLVFGCRQSKIDHIYREETLQAKN----KGVFRELYTAYS 351 (435)
T ss_dssp CTTSCEEEECCGGGGHHHHHHHHHHHHHHHHH-CCCCCCEEEEEEESCTTTSCTTHHHHHHHHH----TTSEEEEEEEES
T ss_pred CCCCCEEEEECCcCcHHHHHHHHHHHHhhhhc-cCCCCCEEEEEeecccccchhHHHHHHHHHH----cCCccEEEEEEC
Confidence 45688999999999999999999987642110 11346799999999997 6677777654322 234568888899
Q ss_pred CCCCC-ccchhhhccchhHHHHh-cc-CCCCeeEEcCcchHHHHHHHHH
Q 005126 498 QEEQS-SVTVREVLNDLSLVRAV-RF-GTQSNYAVNGLESLIWMAALVG 543 (713)
Q Consensus 498 r~~~~-~~~~~g~~~~~~~~~~~-~~-~~~~~~~vcGp~~~~~~a~~~~ 543 (713)
|+++. ....++.+.+....+.. .. .++..+|+|||++|+....-++
T Consensus 352 r~~~~~k~yVq~~l~~~l~~~~~~~l~~~~~~vYvCGp~~M~~~V~~~L 400 (435)
T 1f20_A 352 REPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDVTMAADVLKAI 400 (435)
T ss_dssp SCTTSCCCCHHHHHHHHSHHHHHHHHHTSCCEEEEEECHHHHHHHHHHH
T ss_pred CCCCCCCcchhhHHHhhhHHHHHHHHhcCCcEEEEeCChhHHHHHHHHH
Confidence 98653 23344444332011111 11 2457899999999988765543
No 31
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=99.65 E-value=2e-16 Score=185.01 Aligned_cols=200 Identities=16% Similarity=0.148 Sum_probs=134.0
Q ss_pred cCCCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEe--------------CCchhHHHHHHHHhccc-CCCCCCc
Q 005126 337 FTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKC--------------DGEWTSSLYQMIHAELD-SDADQMR 401 (713)
Q Consensus 337 ~~pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~--------------~G~~T~~L~~~~~~~~~-~~~~~~~ 401 (713)
--|+||+...+|.+ +.|||||+|+|..+++.++++|+. .|..|+.|.+....... .......
T Consensus 414 ~~p~~~l~~~lp~l---~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~g~~~~~~~~~~~ 490 (682)
T 2bpo_A 414 TVPMQFLVESVPQM---TPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNL 490 (682)
T ss_dssp TSCHHHHHHHSCBC---CCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHHHHTTCCTTTSCC
T ss_pred CCCHHHHHHhCccc---ccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhccccccccccccccc
Confidence 46899888888864 899999999987556788888754 48889999884321000 0011123
Q ss_pred ceeEEEECCCCCC--------------CCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhcc----CCCCCCceEEEEEE
Q 005126 402 CIPVAIEGPYGPA--------------TMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSN----RKYRFPSKVQLIYV 463 (713)
Q Consensus 402 ~~~v~VeGPYG~~--------------~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~----~~~~~~~~v~Lvw~ 463 (713)
|..+.|+||+|.+ ..+-....++||||||+|||||+++++++...... .......++.|+|+
T Consensus 491 G~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~g~~~~~~~L~fG 570 (682)
T 2bpo_A 491 PVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFYG 570 (682)
T ss_dssp CCCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----CCCCCCEEEEEE
T ss_pred ccceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhhcccccccccCCcCCEEEEEe
Confidence 7789999999985 11222357899999999999999999998765420 01112468999999
Q ss_pred eCCcchhhhHHhHhHHhhhccCCCccEEEEEEEeCCCC-CccchhhhccchhHHHHhccCCCCeeEEcCc-chHHHHHHH
Q 005126 464 IKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQ-SSVTVREVLNDLSLVRAVRFGTQSNYAVNGL-ESLIWMAAL 541 (713)
Q Consensus 464 ~r~~~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp-~~~~~~a~~ 541 (713)
+|+.+|+.+.+|+.+...+ ...++++++.++|+++ ....+++.+.+....-.....++..+|+||| ++|+....-
T Consensus 571 ~R~~~D~ly~dEl~~~~~~---~g~~~~l~~afSr~d~~~k~yVqd~l~e~~~~l~~~l~~~~~vYvCGpa~~M~~~V~~ 647 (682)
T 2bpo_A 571 SRNTDDFLYQDEWPEYAKK---LDGSFEMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGDAKGMAKGVST 647 (682)
T ss_dssp ESSSSSCTTTTTHHHHHHH---HGGGEEEEEEESCCTTSCCCCHHHHHHHTHHHHHHHHTTTCEEEEEECSTTHHHHHHH
T ss_pred cCChhhhhhHHHHHHHHHh---cCCceEEEEEECCCCCCCCcchHHHHHhhHHHHHHHHhCCcEEEEeCCchHhHHHHHH
Confidence 9999998888877653221 1246889999999543 3333444443321110011234578999999 689887655
Q ss_pred H
Q 005126 542 V 542 (713)
Q Consensus 542 ~ 542 (713)
+
T Consensus 648 ~ 648 (682)
T 2bpo_A 648 A 648 (682)
T ss_dssp H
T ss_pred H
Confidence 4
No 32
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=99.63 E-value=6.1e-16 Score=180.92 Aligned_cols=185 Identities=17% Similarity=0.123 Sum_probs=128.6
Q ss_pred CCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEeC-------------CchhHHHHHHHHhcccCCCCCCcceeE
Q 005126 339 PTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD-------------GEWTSSLYQMIHAELDSDADQMRCIPV 405 (713)
Q Consensus 339 pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~~-------------G~~T~~L~~~~~~~~~~~~~~~~~~~v 405 (713)
|+||+...+|.+ +.|||||+|+|..+++.++++|+.. |..|+.|.++ ..|..+
T Consensus 418 p~~~l~~~lp~l---~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~~G~~S~~L~~l-----------~~Gd~v 483 (688)
T 1tll_A 418 PATLLLTQLSLL---QPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI-----------QADDVV 483 (688)
T ss_dssp CHHHHHHHSCBC---CCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEEECHHHHHHTTC-----------CTTSEE
T ss_pred CHHHHHHhCccc---ceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcCCCchhHHHHhC-----------CCCCEE
Confidence 566666666654 8999999999864467899999853 6788888542 247889
Q ss_pred EEEC-CCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcc-hhhhHHhHhHHhhhc
Q 005126 406 AIEG-PYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQ-EICLLNSISPLLSNQ 483 (713)
Q Consensus 406 ~VeG-PYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~~~-~l~~~~~l~~~l~~~ 483 (713)
.|.| |.|.+..+-....++||||||+||||++++++++.....+. .....++.|+|++|+.+ |+.+.+++.+...
T Consensus 484 ~v~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~~~~~~~~-~~~~~~v~L~~G~R~~~~D~ly~dEL~~~~~-- 560 (688)
T 1tll_A 484 PCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHK-GMNPCPMVLVFGCRQSKIDHIYREETLQAKN-- 560 (688)
T ss_dssp EEEEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHHHHHHHHS-CCCCCCEEEEEEESCTTTTCTTHHHHHHHHH--
T ss_pred EEEeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHHHHHhhhhc-cCCCCCEEEEEEeccchhhhhHHHHHHHHHH--
Confidence 9999 66677655445678999999999999999999987642111 11347899999999997 6777777654322
Q ss_pred cCCCccEEEEEEEeCCCCC-ccchhhhccchhHHHHh-cc-CCCCeeEEcCcchHHHHHHHH
Q 005126 484 QSKKWHLTLKVFVTQEEQS-SVTVREVLNDLSLVRAV-RF-GTQSNYAVNGLESLIWMAALV 542 (713)
Q Consensus 484 ~~~~~~l~i~iyvTr~~~~-~~~~~g~~~~~~~~~~~-~~-~~~~~~~vcGp~~~~~~a~~~ 542 (713)
+...+++++.++|+++. ....++++.+....+.. .. .++..+|+|||++|+....-.
T Consensus 561 --~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~l~~~l~~~l~~~~~~vYvCGp~~M~~~V~~~ 620 (688)
T 1tll_A 561 --KGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDVTMAADVLKA 620 (688)
T ss_dssp --TTSEEEEEEEESSCTTSCCCCHHHHHHHSSHHHHHHHHHTSCCEEEEEEEHHHHHHHHHH
T ss_pred --cCCceEEEEEECCCCCCCccchhhhhHHhHHHHHHHhhccCCcEEEEeCCHHHHHHHHHH
Confidence 23457888899998654 23344444432011111 11 245789999999998876544
No 33
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=99.60 E-value=5.6e-15 Score=164.34 Aligned_cols=181 Identities=17% Similarity=0.152 Sum_probs=121.3
Q ss_pred CCcceeeeeeeeCCCCCCCcEEEEEEe-----------CCchhHHHHHHHHhcccCCCCCCcceeEEEECCCCCCCCCcC
Q 005126 351 SKFQWHSFSITSSSSVDDQTMSLIVKC-----------DGEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFL 419 (713)
Q Consensus 351 s~~q~HPFTIaS~p~~~~~~l~~~Ik~-----------~G~~T~~L~~~~~~~~~~~~~~~~~~~v~VeGPYG~~~~~~~ 419 (713)
.+++.|+|||+|+|..+++.+++.|+. .|..|+.|.+... ..+......+.|.||+|.+..+..
T Consensus 230 p~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~~r~~~G~~S~~L~~l~~-----gg~~~~~~~v~v~~p~g~F~lp~~ 304 (458)
T 3qfs_A 230 PRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEP-----VGENGGRALVPMFVRKSQFRLPFK 304 (458)
T ss_dssp CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCS-----SCSSCCCCEEEEEEECCSCCCCSS
T ss_pred CCCcceeEeeccCcccCCCEEEEEEEEEEecCCCCCCCCCchhHHHHhhcc-----CCccCCceEEEEEecCCCcccCCC
Confidence 345899999999987557789988864 4778888876532 000011236999999998876655
Q ss_pred CCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCc-chhhhHHhHhHHhhhccCCCccEEEEEEEeC
Q 005126 420 RYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSS-QEICLLNSISPLLSNQQSKKWHLTLKVFVTQ 498 (713)
Q Consensus 420 ~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~~-~~l~~~~~l~~~l~~~~~~~~~l~i~iyvTr 498 (713)
...+++|||||+||||+++++++......++ ....++.|+|++|+. +|+.+.+++.+...+ ....++++.++|
T Consensus 305 ~~~piImIggGTGIAPfrs~lq~r~~l~~~g--~~~~~~~Lf~G~R~~~~D~ly~dEl~~l~~~----g~l~~l~~a~SR 378 (458)
T 3qfs_A 305 ATTPVIMVGPGTGVAPFIGFIQERAWLRQQG--KEVGETLLYYGCRRSDEDYLYREELAQFHRD----GALTQLNVAFSR 378 (458)
T ss_dssp TTSCEEEECCGGGGHHHHHHHHHHHHHHHHT--CCCCCEEEEEEESCTTTSCTTHHHHHHHHHH----TSSSEEEEEETT
T ss_pred CCCceEEEcCCcchhhHHHHHHHHHHHHhcC--CCCCCEEEEEEeCCchHhhhHHHHHHHHHHc----CCCCEEEEEEEC
Confidence 5679999999999999999999864321111 123679999999996 788888877553322 123377888899
Q ss_pred CCCCccchhhhccchhHHHHhccCCCCeeEEcCcc-hHHHHHHHH
Q 005126 499 EEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLE-SLIWMAALV 542 (713)
Q Consensus 499 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~-~~~~~a~~~ 542 (713)
+++.....++.+.+....-.....++..+|+|||+ .|+....-+
T Consensus 379 d~~~k~yVqd~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~~V~~~ 423 (458)
T 3qfs_A 379 EQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNT 423 (458)
T ss_dssp SSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHHHHHHH
T ss_pred CCCCcccHhHHHHHhHHHHHHHhcCCCEEEEECCCHHHHHHHHHH
Confidence 87654445554433221100112346789999997 677665443
No 34
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=99.58 E-value=1e-14 Score=168.81 Aligned_cols=190 Identities=17% Similarity=0.174 Sum_probs=126.9
Q ss_pred CCeEEEEeCCCCCCcceeeeeeeeCCCCCCCcEEEEEEe-----------CCchhHHHHHHHHhcccCCCCCCcceeEEE
Q 005126 339 PTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKC-----------DGEWTSSLYQMIHAELDSDADQMRCIPVAI 407 (713)
Q Consensus 339 pGQ~v~L~~P~~s~~q~HPFTIaS~p~~~~~~l~~~Ik~-----------~G~~T~~L~~~~~~~~~~~~~~~~~~~v~V 407 (713)
|.+++.-.+| +.+.|||||+|+|..+++.+.+.|+. .|..|+.|.+.... .+.....+|.|
T Consensus 381 p~~~l~~~lp---~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~-----Gd~~~~~~v~v 452 (618)
T 3qe2_A 381 PIDHLCELLP---RLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPV-----GENGGRALVPM 452 (618)
T ss_dssp CHHHHHHHSC---BCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC----------CCEEEE
T ss_pred CHHHHHHhcc---ccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhccc-----CCCCcceEEEE
Confidence 4444433334 34889999999987556788888753 48889988765210 00001137999
Q ss_pred ECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCc-chhhhHHhHhHHhhhccCC
Q 005126 408 EGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSS-QEICLLNSISPLLSNQQSK 486 (713)
Q Consensus 408 eGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~~-~~l~~~~~l~~~l~~~~~~ 486 (713)
.||+|.+..+.....+++|||||+||||+++++++......++ ....++.|+|++|+. +|+.+.+++.+...+
T Consensus 453 ~~p~g~F~lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g--~~~~~~~L~~G~R~~~~D~ly~~el~~~~~~---- 526 (618)
T 3qe2_A 453 FVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQG--KEVGETLLYYGCRRSDEDYLYREELAQFHRD---- 526 (618)
T ss_dssp EEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTT--CCCCCEEEEEEESCTTTSCTTHHHHHHHHHH----
T ss_pred EEecCcccCCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcC--CCCCCEEEEEecCCCccccchHHHHHHHHhc----
Confidence 9999988766555678999999999999999999987542211 124679999999999 588888877553321
Q ss_pred CccEEEEEEEeCCCCCccchhhhccchhHHHHhccCCCCeeEEcCcc-hHHHHHHHH
Q 005126 487 KWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLE-SLIWMAALV 542 (713)
Q Consensus 487 ~~~l~i~iyvTr~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~-~~~~~a~~~ 542 (713)
....+++...+|+++.....++.+.+....-.....++..+|+|||+ .|+....-+
T Consensus 527 g~l~~l~~a~Srd~~~k~yVqd~l~~~~~~l~~~l~~~a~vYvCGp~~~M~~~V~~~ 583 (618)
T 3qe2_A 527 GALTQLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNT 583 (618)
T ss_dssp TSSSEEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHHTCEEEEEEETTTHHHHHHHH
T ss_pred CCCcEEEEEEcCCCCCCCcHHHHHHHhHHHHHHHHhCCcEEEEECCchHHHHHHHHH
Confidence 12337888889987655555555543321111112345789999997 888776554
No 35
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.54 E-value=1.3e-14 Score=136.51 Aligned_cols=120 Identities=11% Similarity=0.097 Sum_probs=80.5
Q ss_pred EEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcchhhhHHhHhHHhhhcc
Q 005126 405 VAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQ 484 (713)
Q Consensus 405 v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~l~~~~ 484 (713)
+.|+||||.+.. ..+.+++++||||+||||++|+++++.+++ .+++++ ++|+.+++.+.+++.+ +.
T Consensus 3 ~~v~GP~G~~~~-~~~~~~~llIaGG~GiaPl~sm~~~l~~~~--------~~v~l~-g~R~~~~~~~~~el~~-l~--- 68 (142)
T 3lyu_A 3 LNVAGPLGTPVP-MEKFGKILAIGAYTGIVEVYPIAKAWQEIG--------NDVTTL-HVTFEPMVILKEELEK-AV--- 68 (142)
T ss_dssp ----CCCSCCBC-CCCCSEEEEEEETTHHHHHHHHHHHHHHTT--------CEEEEE-EEEEGGGCCSHHHHHT-TS---
T ss_pred eeeeCCCCCCcc-CCCCCeEEEEECcCcHHHHHHHHHHHHhcC--------CcEEEE-EeCCHHHhhHHHHHHH-HH---
Confidence 468999998753 345789999999999999999999987642 579999 9999999988888644 21
Q ss_pred CCCccEEEEEEEeCCC----CCccchhhhccchhHHHHhccCCCCeeEEcCcchHHHHHHHH
Q 005126 485 SKKWHLTLKVFVTQEE----QSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALV 542 (713)
Q Consensus 485 ~~~~~l~i~iyvTr~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~a~~~ 542 (713)
.++.+..++.+++ +.+.+.+|++++. +.+.....+...+|+|||++|++.+.-.
T Consensus 69 ---~~~~~~~~~~~~~~~~~d~~~g~~G~v~~~-l~~~~~~~~~~~vy~CGP~~Mm~av~~~ 126 (142)
T 3lyu_A 69 ---TRHIVEPVPLNPNQDFLANMKNVSQRLKEK-VRELLESEDWDLVFMVGPVGDQKQVFEV 126 (142)
T ss_dssp ---SEEEEEEECCCTTSCHHHHHHHHHHHHHHH-HHHHHHSSCCSEEEEESCHHHHHHHHHH
T ss_pred ---hheEEEEeecccccCCCCCCCCCccchhHH-HHHhcccCCCCEEEEECCHHHHHHHHHH
Confidence 1333333333321 1123456777653 3333333334679999999999987543
No 36
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.52 E-value=1.1e-14 Score=139.50 Aligned_cols=123 Identities=10% Similarity=0.081 Sum_probs=79.2
Q ss_pred ccee-EEEECCCCCCCCCcCCCCeEEEEEecCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcchhhhHHhHhHH
Q 005126 401 RCIP-VAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPL 479 (713)
Q Consensus 401 ~~~~-v~VeGPYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~l~~~~~~~~~~~~~~v~Lvw~~r~~~~l~~~~~l~~~ 479 (713)
.|++ +.|+||+|.+.. ....++++|||||+||||++|+++++.+++ .+++|+ ++|+.+|+.+.+++.+
T Consensus 3 ~Gd~vl~v~gP~G~~f~-~~~~~~~llIaGG~GItPl~sm~~~l~~~~--------~~v~l~-g~r~~~d~~~~~el~~- 71 (158)
T 3lrx_A 3 EGDSLLNVAGPLGTPVP-MEKFGKILAIGAYTGIVEVYPIAKAWQEIG--------NDVTTL-HVTFEPMVILKEELEK- 71 (158)
T ss_dssp ---------CCCCCCBC-CCCCSEEEEEEETTHHHHHHHHHHHHHHHT--------CEEEEE-EECBGGGCCSHHHHHH-
T ss_pred CCCEeeEEECCCCCCCc-cCCCCeEEEEEccCcHHHHHHHHHHHHhcC--------CcEEEE-EeCCHHHhhHHHHHHH-
Confidence 4778 599999998642 346789999999999999999999997642 579999 9999999999888754
Q ss_pred hhhccCCCccEEEEEEEeCCC----CCccchhhhccchhHHHHhccCCCCeeEEcCcchHHHHHHH
Q 005126 480 LSNQQSKKWHLTLKVFVTQEE----QSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAAL 541 (713)
Q Consensus 480 l~~~~~~~~~l~i~iyvTr~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~a~~ 541 (713)
+. + ++.+...+++++ +.+.+.+|++++. +.+.....+...+|+|||++|++.+.-
T Consensus 72 l~----~--~~~~~~v~~~~~~~~~~~~~g~~G~v~~~-l~~~l~~~~~~~vy~CGP~~mm~~v~~ 130 (158)
T 3lrx_A 72 AV----T--RHIVEPVPLNPNQDFLANMKNVSQRLKEK-VRELLESEDWDLVFMVGPVGDQKQVFE 130 (158)
T ss_dssp HS----S--EEEECCBCCCTTSCHHHHHHHHHHHHHHH-HHHHHHHSCCSEEEEESCHHHHHHHHH
T ss_pred HH----h--ceEEEEeeccccccCCCCCCCCcccccHH-HHHhhccCCCCEEEEECCHHHHHHHHH
Confidence 21 1 222221122221 1123456777653 233333334467999999999998754
No 37
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=91.51 E-value=0.12 Score=54.19 Aligned_cols=37 Identities=19% Similarity=0.434 Sum_probs=30.0
Q ss_pred cCCCChHHHHHHHHhhcCCceEEEEEeCchhhHHHHHHHHhh
Q 005126 647 GGRPNFEEIFSELEKETAGSDIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 647 g~RP~~~~i~~~~~~~~~~~~vGV~vCGP~~l~~~va~~c~~ 688 (713)
++|++..+++.+ ...+..||+|||+.|.++|++.+++
T Consensus 178 ~g~~~~~~ll~~-----~~~~~~vyvCGP~~m~~~v~~~l~~ 214 (321)
T 2pia_A 178 TKAFDFWSVFEK-----SKPAQHVYCCGPQALMDTVRDMTGH 214 (321)
T ss_dssp TSCCCHHHHHSS-----CCTTEEEEEESCHHHHHHHHHHTTT
T ss_pred cCccCHHHHhcc-----cCCCCEEEEECCHHHHHHHHHHHHh
Confidence 579998887654 2245679999999999999999876
No 38
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=89.81 E-value=0.1 Score=51.98 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=27.3
Q ss_pred CCCChHHHHHHHHhhcCCceEEEEEeCchhhHHHHHHHHhhh
Q 005126 648 GRPNFEEIFSELEKETAGSDIGVLVCGPESMKESVAKTSQRK 689 (713)
Q Consensus 648 ~RP~~~~i~~~~~~~~~~~~vGV~vCGP~~l~~~va~~c~~~ 689 (713)
+|++...+ . .+..+.-||+|||+.|.++|++.+++.
T Consensus 188 g~~~~~~~--~----~~~~~~~vyvCGp~~m~~~v~~~l~~~ 223 (243)
T 4eh1_A 188 GEMQLAEL--I----LPIEDGDFYLCGPIGFMQYVVKQLLAL 223 (243)
T ss_dssp SSCCCTTS--C----CCTTTCEEEEEECHHHHHHHHHHHHHH
T ss_pred CCccHHHe--e----ccCCCcEEEEECCHHHHHHHHHHHHHc
Confidence 67776544 1 233567899999999999999999863
No 39
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=88.83 E-value=0.22 Score=53.77 Aligned_cols=36 Identities=11% Similarity=0.122 Sum_probs=27.9
Q ss_pred CCCChHHHHHHHHhhcCCceEEEEEeCchhhHHHHHHHHhh
Q 005126 648 GRPNFEEIFSELEKETAGSDIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 648 ~RP~~~~i~~~~~~~~~~~~vGV~vCGP~~l~~~va~~c~~ 688 (713)
||++...+-+.+ +. +..||+|||+.|.++|++.+.+
T Consensus 342 g~~~~~~l~~~~----~~-~~~vyvCGp~~m~~~v~~~L~~ 377 (399)
T 4g1v_A 342 PLINAAFLKEKS----PA-HADVYTCGSLAFMQAMIGHLKE 377 (399)
T ss_dssp CCCCHHHHHHHS----CS-SCEEEEEECHHHHHHHHHHHHH
T ss_pred CcccHHHHHhhC----CC-CCEEEEECCHHHHHHHHHHHHH
Confidence 688865544322 22 6789999999999999999977
No 40
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=86.98 E-value=0.3 Score=44.79 Aligned_cols=22 Identities=18% Similarity=0.255 Sum_probs=20.0
Q ss_pred EEEEeCchhhHHHHHHHHhhhh
Q 005126 669 GVLVCGPESMKESVAKTSQRKS 690 (713)
Q Consensus 669 GV~vCGP~~l~~~va~~c~~~~ 690 (713)
-||+|||+.|.+.|++.+++.+
T Consensus 110 ~vy~CGP~~Mm~av~~~l~~~~ 131 (142)
T 3lyu_A 110 LVFMVGPVGDQKQVFEVVKEYG 131 (142)
T ss_dssp EEEEESCHHHHHHHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHHHHHHcC
Confidence 4999999999999999999855
No 41
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=86.65 E-value=0.29 Score=48.37 Aligned_cols=23 Identities=9% Similarity=0.150 Sum_probs=19.7
Q ss_pred ceEEEEEeCchhhHHHHHHHH-hh
Q 005126 666 SDIGVLVCGPESMKESVAKTS-QR 688 (713)
Q Consensus 666 ~~vGV~vCGP~~l~~~va~~c-~~ 688 (713)
.+.-||+|||+.|.++|++.+ .+
T Consensus 193 ~~~~vyvCGp~~m~~~v~~~l~~~ 216 (232)
T 1qfj_A 193 AEHDIYIAGRFEMAKIARDLFCSE 216 (232)
T ss_dssp TTCEEEEESCHHHHHHHHHHHHHH
T ss_pred cccEEEEECCHHHHHHHHHHHHHH
Confidence 345699999999999999987 65
No 42
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=86.17 E-value=0.41 Score=47.97 Aligned_cols=22 Identities=18% Similarity=0.561 Sum_probs=19.8
Q ss_pred eEEEEEeCchhhHHHHHHHHhh
Q 005126 667 DIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 667 ~vGV~vCGP~~l~~~va~~c~~ 688 (713)
+.-||+|||+.|.++|++.+++
T Consensus 210 ~~~vyvCGp~~m~~~v~~~l~~ 231 (250)
T 1tvc_A 210 NPDIYLCGPPGMIDAACELVRS 231 (250)
T ss_dssp SSEEEEESSHHHHHHHHHHHHH
T ss_pred CcEEEEeCCHHHHHHHHHHHHH
Confidence 4569999999999999999976
No 43
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=86.09 E-value=0.46 Score=48.20 Aligned_cols=25 Identities=16% Similarity=0.379 Sum_probs=22.1
Q ss_pred CceEEEEEeCchhhHHHHHHHHhhh
Q 005126 665 GSDIGVLVCGPESMKESVAKTSQRK 689 (713)
Q Consensus 665 ~~~vGV~vCGP~~l~~~va~~c~~~ 689 (713)
..+.-||+|||++|.++|++.+++.
T Consensus 226 ~~~~~v~vCGp~~m~~~v~~~l~~~ 250 (271)
T 4fk8_A 226 PEQDRVMLCGSTAMLKDTTELLKKA 250 (271)
T ss_dssp TTTEEEEEEECHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHc
Confidence 3577899999999999999999874
No 44
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=84.66 E-value=0.47 Score=44.34 Aligned_cols=21 Identities=19% Similarity=0.260 Sum_probs=19.1
Q ss_pred EEEEeCchhhHHHHHHHHhhh
Q 005126 669 GVLVCGPESMKESVAKTSQRK 689 (713)
Q Consensus 669 GV~vCGP~~l~~~va~~c~~~ 689 (713)
-||+|||+.|.++|++.+.+.
T Consensus 115 ~vy~CGP~~mm~~v~~~l~~~ 135 (158)
T 3lrx_A 115 LVFMVGPVGDQKQVFEVVKEY 135 (158)
T ss_dssp EEEEESCHHHHHHHHHHHGGG
T ss_pred EEEEECCHHHHHHHHHHHHHc
Confidence 499999999999999999874
No 45
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=83.86 E-value=0.58 Score=47.87 Aligned_cols=23 Identities=30% Similarity=0.595 Sum_probs=20.7
Q ss_pred ceEEEEEeCchhhHHHHHHHHhh
Q 005126 666 SDIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 666 ~~vGV~vCGP~~l~~~va~~c~~ 688 (713)
.+.-||+|||+.|.++|++.+.+
T Consensus 254 ~~~~vyvCGp~~m~~~v~~~l~~ 276 (290)
T 2r6h_A 254 EDIEYYMCGPGPMANAVKGMLEN 276 (290)
T ss_dssp GGEEEEEECCHHHHHHHHHHHHH
T ss_pred CCcEEEEECCHHHHHHHHHHHHH
Confidence 46779999999999999999976
No 46
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=81.93 E-value=0.87 Score=47.28 Aligned_cols=26 Identities=15% Similarity=0.309 Sum_probs=21.9
Q ss_pred CCceEEEEEeCchhhHHHHHHHHhhh
Q 005126 664 AGSDIGVLVCGPESMKESVAKTSQRK 689 (713)
Q Consensus 664 ~~~~vGV~vCGP~~l~~~va~~c~~~ 689 (713)
...+..||+|||+.|.++|++.+.+-
T Consensus 259 ~~~~~~vyvCGp~~M~~~v~~~L~~~ 284 (310)
T 3vo2_A 259 KKDNTYVYMCGLKGMEKGIDDIMLNL 284 (310)
T ss_dssp TSTTEEEEEEESTTHHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCHHHHHHHHHHHHHH
Confidence 34578899999999999999888763
No 47
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=81.71 E-value=0.52 Score=49.24 Aligned_cols=24 Identities=17% Similarity=0.383 Sum_probs=20.8
Q ss_pred ceEEEEEeCchhhHHHHHHHHhhh
Q 005126 666 SDIGVLVCGPESMKESVAKTSQRK 689 (713)
Q Consensus 666 ~~vGV~vCGP~~l~~~va~~c~~~ 689 (713)
.+..||+|||+.|.++++++|.+.
T Consensus 277 ~~~~vyvCGP~~m~~~v~~~l~~~ 300 (316)
T 3jqq_A 277 YKCELYICGKKSIRYKVMDILKSH 300 (316)
T ss_dssp TCCEEEEEECSTHHHHHHHHHHC-
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHc
Confidence 357899999999999999999873
No 48
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=81.59 E-value=0.63 Score=48.27 Aligned_cols=44 Identities=18% Similarity=0.388 Sum_probs=27.9
Q ss_pred cCCCChHHHHHHHHhhc---CCceEEEEEeCchhhHHHHHHHHhhhh
Q 005126 647 GGRPNFEEIFSELEKET---AGSDIGVLVCGPESMKESVAKTSQRKS 690 (713)
Q Consensus 647 g~RP~~~~i~~~~~~~~---~~~~vGV~vCGP~~l~~~va~~c~~~~ 690 (713)
|+|....+.+.+..++. ...+..||+|||+.|.++|++.+.+..
T Consensus 240 g~~~~v~~~l~~~~~~~~~~~~~~~~vyvCGp~~m~~~v~~~L~~~~ 286 (311)
T 3lo8_A 240 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPGIQDTLKKVA 286 (311)
T ss_dssp ---CCHHHHHHHTHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred CCcceehHHHHHHHHHHHHhhcCCcEEEEECCHHHHHHHHHHHHHHH
Confidence 45666666665432211 023567999999999999988887643
No 49
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=81.15 E-value=0.86 Score=48.97 Aligned_cols=22 Identities=23% Similarity=0.431 Sum_probs=19.8
Q ss_pred eEEEEEeCchhhHHHHHHHHhh
Q 005126 667 DIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 667 ~vGV~vCGP~~l~~~va~~c~~ 688 (713)
+.-||+|||+.|.++|++.+.+
T Consensus 356 ~~~vyvCGp~~m~~~v~~~L~~ 377 (396)
T 1gvh_A 356 TMQFYLCGPVGFMQFTAKQLVD 377 (396)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHH
Confidence 4569999999999999999976
No 50
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=80.13 E-value=1 Score=48.49 Aligned_cols=37 Identities=16% Similarity=0.287 Sum_probs=25.9
Q ss_pred CCCChHHHHHHHHhhcCCceEEEEEeCchhhHHHHHHHHhh
Q 005126 648 GRPNFEEIFSELEKETAGSDIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 648 ~RP~~~~i~~~~~~~~~~~~vGV~vCGP~~l~~~va~~c~~ 688 (713)
||.+...+ .+.. ..+ +.-||+|||+.|.++|++.+.+
T Consensus 347 G~i~~~~l-~~~~-~~~--~~~vyvCGp~~m~~~v~~~L~~ 383 (403)
T 1cqx_A 347 GLVDVKQI-EKSI-LLP--DADYYICGPIPFMRMQHDALKN 383 (403)
T ss_dssp SSCCGGGS-HHHH-CCT--TCEEEEESSHHHHHHHHHHHHH
T ss_pred CCcCHHHH-hhcc-CCC--CCEEEEeCCHHHHHHHHHHHHH
Confidence 68875432 2211 112 4569999999999999999976
No 51
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=79.32 E-value=0.72 Score=48.43 Aligned_cols=22 Identities=32% Similarity=0.616 Sum_probs=19.7
Q ss_pred eEEEEEeCchhhHHHHHHHHhh
Q 005126 667 DIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 667 ~vGV~vCGP~~l~~~va~~c~~ 688 (713)
+.-||+|||+.|.++|++.+++
T Consensus 301 ~~~vy~CGp~~m~~~v~~~l~~ 322 (338)
T 1krh_A 301 EVDVYLCGPVPMVEAVRSWLDT 322 (338)
T ss_dssp CSEEEEEEEHHHHHHHHHHHHH
T ss_pred CcEEEEECCHHHHHHHHHHHHH
Confidence 4569999999999999999976
No 52
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=76.57 E-value=1.1 Score=45.04 Aligned_cols=22 Identities=5% Similarity=0.045 Sum_probs=19.7
Q ss_pred ceEEEEEeCchhhHHHHHHHHh
Q 005126 666 SDIGVLVCGPESMKESVAKTSQ 687 (713)
Q Consensus 666 ~~vGV~vCGP~~l~~~va~~c~ 687 (713)
.+.-||+|||+.|.++|++.++
T Consensus 190 ~~~~vy~CGP~~m~~av~~~l~ 211 (252)
T 2gpj_A 190 GEPAVWIACEFNSMRALRRHFK 211 (252)
T ss_dssp SCEEEEEEEEHHHHHHHHHHHH
T ss_pred CCcEEEEEcCHHHHHHHHHHHH
Confidence 4567999999999999999987
No 53
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=76.16 E-value=2.3 Score=43.70 Aligned_cols=42 Identities=21% Similarity=0.408 Sum_probs=26.7
Q ss_pred cCCCChHHHHHHH----HhhcCCceEEEEEeCchhhHHHHHHHHhh
Q 005126 647 GGRPNFEEIFSEL----EKETAGSDIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 647 g~RP~~~~i~~~~----~~~~~~~~vGV~vCGP~~l~~~va~~c~~ 688 (713)
|+|...++.+.+. .+.....+.-||+|||+.|.++|++.+.+
T Consensus 232 ~~~~~v~~~l~~~~~~l~~~~~~~~~~vyvCGp~~m~~~v~~~l~~ 277 (304)
T 2bmw_A 232 GGRMYIQDRVAEHADQLWQLIKNQKTHTYICGPPPMEEGIDAALSA 277 (304)
T ss_dssp SSBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECTTHHHHHHHHHHH
T ss_pred CCcceehHHHHHhHHHHHHHhhcCCcEEEEECCHHHHHHHHHHHHH
Confidence 3455666555432 22123345679999999999988776654
No 54
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=74.19 E-value=2.4 Score=45.80 Aligned_cols=43 Identities=23% Similarity=0.415 Sum_probs=28.6
Q ss_pred cCCCChHHHHHHHHhh----cCCceEEEEEeCchhhHHHHHHHHhhh
Q 005126 647 GGRPNFEEIFSELEKE----TAGSDIGVLVCGPESMKESVAKTSQRK 689 (713)
Q Consensus 647 g~RP~~~~i~~~~~~~----~~~~~vGV~vCGP~~l~~~va~~c~~~ 689 (713)
|+|....+.+.+..++ ....+.-||+|||+.|.++|++.+.+.
T Consensus 330 g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGP~~M~~~v~~~L~~~ 376 (402)
T 2b5o_A 330 GGKVYVQSRVSEYADELFEMIQKPNTHVYMCGLKGMQPPIDETFTAE 376 (402)
T ss_dssp SCBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECGGGHHHHHHHHHHH
T ss_pred CCccchHHHHHHhHHHHHHHhccCCcEEEEECCHHHHHHHHHHHHHH
Confidence 3455566655542222 222356799999999999999988763
No 55
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=74.03 E-value=2.5 Score=41.93 Aligned_cols=24 Identities=17% Similarity=0.331 Sum_probs=20.9
Q ss_pred CceEEEEEeCchhhHHHHHHHH-hh
Q 005126 665 GSDIGVLVCGPESMKESVAKTS-QR 688 (713)
Q Consensus 665 ~~~vGV~vCGP~~l~~~va~~c-~~ 688 (713)
..+.-||+|||+.|.++|++.+ ++
T Consensus 204 ~~~~~vy~CGp~~m~~~v~~~l~~~ 228 (248)
T 1fdr_A 204 KETSHVMLCGNPQMVRDTQQLLKET 228 (248)
T ss_dssp TTTEEEEEEECHHHHHHHHHHHHHH
T ss_pred ccCCEEEEeCCHHHHHHHHHHHHHH
Confidence 3567799999999999999998 66
No 56
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=73.60 E-value=1.7 Score=43.53 Aligned_cols=23 Identities=26% Similarity=0.459 Sum_probs=20.6
Q ss_pred ceEEEEEeCchhhHHHHHHHHhh
Q 005126 666 SDIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 666 ~~vGV~vCGP~~l~~~va~~c~~ 688 (713)
.+.-||+|||+.|.++|++.+.+
T Consensus 211 ~~~~vyvCGp~~m~~~v~~~l~~ 233 (257)
T 2qdx_A 211 QDDRAMICGSPSMLEETSAVLDS 233 (257)
T ss_dssp TTEEEEEEECHHHHHHHHHHHHH
T ss_pred CCCEEEEECCHHHHHHHHHHHHH
Confidence 45679999999999999999976
No 57
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=73.25 E-value=2.5 Score=42.72 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=20.6
Q ss_pred ceEEEEEeCchhhHHHHHHHHhh
Q 005126 666 SDIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 666 ~~vGV~vCGP~~l~~~va~~c~~ 688 (713)
.+.-||+|||+.|.++|++.+.+
T Consensus 225 ~~~~vyvCGp~~m~~~v~~~l~~ 247 (272)
T 2bgi_A 225 ETDRAMVCGSLAFNVDVMKVLES 247 (272)
T ss_dssp TTEEEEEEECHHHHHHHHHHHHT
T ss_pred CCcEEEEECCHHHHHHHHHHHHH
Confidence 45679999999999999999976
No 58
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=72.16 E-value=2.6 Score=43.67 Aligned_cols=23 Identities=17% Similarity=0.395 Sum_probs=19.3
Q ss_pred ceEEEEEeCchhhHHHHHHHHhh
Q 005126 666 SDIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 666 ~~vGV~vCGP~~l~~~va~~c~~ 688 (713)
.+.-||+|||+.|.++|++.+.+
T Consensus 265 ~~~~vyvCGp~~m~~~v~~~L~~ 287 (314)
T 1fnb_A 265 DNTYVYMCGLKGMEKGIDDIMVS 287 (314)
T ss_dssp TTEEEEEEECTTHHHHHHHHHHH
T ss_pred CCeEEEEECCHHHHHHHHHHHHH
Confidence 45679999999999999877765
No 59
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=71.72 E-value=2.2 Score=42.12 Aligned_cols=24 Identities=33% Similarity=0.641 Sum_probs=21.2
Q ss_pred ceEEEEEeCchhhHHHHHHHHhhh
Q 005126 666 SDIGVLVCGPESMKESVAKTSQRK 689 (713)
Q Consensus 666 ~~vGV~vCGP~~l~~~va~~c~~~ 689 (713)
.+.-||+|||+.|.++|++.+++.
T Consensus 210 ~~~~vy~CGp~~m~~~v~~~l~~~ 233 (243)
T 2eix_A 210 SDIKVMMCGPPMMNKAMQGHLETL 233 (243)
T ss_dssp SSEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCHHHHHHHHHHHHHc
Confidence 467899999999999999999763
No 60
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=55.54 E-value=6 Score=39.60 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=23.2
Q ss_pred ChHHHHHHHHhhcCCceEEEEEeCchhhHHHHHHHHhh
Q 005126 651 NFEEIFSELEKETAGSDIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 651 ~~~~i~~~~~~~~~~~~vGV~vCGP~~l~~~va~~c~~ 688 (713)
...+++++. .+. +--||+|||+.|.++|++ +++
T Consensus 179 ~v~~~l~~~---~~~-~~~vyvCGp~~m~~~v~~-l~~ 211 (262)
T 1ep3_B 179 HVGMLMNEI---DFE-VDALYTCGAPAMLKAVAK-KYD 211 (262)
T ss_dssp CHHHHHHHC---CSC-CSEEEEESCHHHHHHHHH-HTT
T ss_pred ehHHHHHhh---ccC-CCEEEEECCHHHHHHHHH-HHh
Confidence 455555442 122 346999999999999999 865
No 61
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=52.01 E-value=5.8 Score=43.29 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=26.1
Q ss_pred eeEEEEEEec-----CCeEEEEEecC--CCCccCCCeEEEEeCCC
Q 005126 312 TCILSARVFP-----SKAIELILPKH--AGLKFTPTSVIFMKIPS 349 (713)
Q Consensus 312 ~~ivs~~~l~-----~~~v~l~l~~~--~~~~~~pGQ~v~L~~P~ 349 (713)
..+++.+.+. .++..+++..+ .+..|+||+++-|..+.
T Consensus 33 a~v~~~~~l~~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~p~N 77 (435)
T 1f20_A 33 ARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGN 77 (435)
T ss_dssp EEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCC
T ss_pred EEEEeEEECCCCCCCceEEEEEEECCCCCCCcCCCCCEEEEEecC
Confidence 4555666553 24667777653 36899999999998654
No 62
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=51.51 E-value=5.1 Score=40.33 Aligned_cols=23 Identities=26% Similarity=0.488 Sum_probs=19.4
Q ss_pred ceEEEEEeCchhhHH-HHHHHHhh
Q 005126 666 SDIGVLVCGPESMKE-SVAKTSQR 688 (713)
Q Consensus 666 ~~vGV~vCGP~~l~~-~va~~c~~ 688 (713)
.+.-||+|||+.|.+ ++.+.+.+
T Consensus 241 ~~~~vyvCGp~~m~~~~v~~~L~~ 264 (275)
T 1umk_A 241 EEPLVLMCGPPPMIQYACLPNLDH 264 (275)
T ss_dssp GCCEEEEESCHHHHHHTTHHHHHH
T ss_pred CCeEEEEECCHHHHHHHHHHHHHH
Confidence 356799999999999 88888765
No 63
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=47.26 E-value=14 Score=37.81 Aligned_cols=19 Identities=32% Similarity=0.788 Sum_probs=17.5
Q ss_pred EEEe-CchhhHHHHHHHHhh
Q 005126 670 VLVC-GPESMKESVAKTSQR 688 (713)
Q Consensus 670 V~vC-GP~~l~~~va~~c~~ 688 (713)
+|+| ||+.|.++|++.+.+
T Consensus 269 ~yvCGGp~~m~~~v~~~L~~ 288 (314)
T 2rc5_A 269 FYICGGPKGMEKGVIEEIQK 288 (314)
T ss_dssp EEEEESSTTTHHHHHHHHHH
T ss_pred EEEeCCcHHHHHHHHHHHHH
Confidence 5999 999999999999876
No 64
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=40.69 E-value=11 Score=40.04 Aligned_cols=38 Identities=8% Similarity=0.184 Sum_probs=26.2
Q ss_pred eeEEEEEEec-----CCeEEEEEecC-CCCccCCCeEEEEeCCC
Q 005126 312 TCILSARVFP-----SKAIELILPKH-AGLKFTPTSVIFMKIPS 349 (713)
Q Consensus 312 ~~ivs~~~l~-----~~~v~l~l~~~-~~~~~~pGQ~v~L~~P~ 349 (713)
..+++.+.+. .++..+++..+ .++.|+||+++-|..+.
T Consensus 14 a~v~~~~~lt~~~~~~~~~hi~~~~~~~~~~y~~GD~l~v~p~N 57 (374)
T 1ddg_A 14 ASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQN 57 (374)
T ss_dssp EEEEEEEECSCTTCSSEEEEEEEECTTSCCCCCTTCEEEECCCC
T ss_pred EEEEEEEEeCCCCCCceEEEEEEEcCCCCcccCCCCEEEEEcCC
Confidence 3455555553 24677777653 46899999999998764
No 65
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=37.73 E-value=21 Score=37.39 Aligned_cols=25 Identities=32% Similarity=0.643 Sum_probs=22.0
Q ss_pred CeEEEEEecCC--hhhHHHHHHHHHHh
Q 005126 422 DSLLLVAGGIG--ITPFLSILQEIASA 446 (713)
Q Consensus 422 ~~vvlIAGGiG--ITP~lsil~~l~~~ 446 (713)
+++++.|||+| |.|.++++++|.++
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC
Confidence 57899999997 89999999999765
No 66
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=37.20 E-value=12 Score=43.17 Aligned_cols=22 Identities=36% Similarity=0.511 Sum_probs=18.9
Q ss_pred eEEEEEeCchhhHHHHHHHHhh
Q 005126 667 DIGVLVCGPESMKESVAKTSQR 688 (713)
Q Consensus 667 ~vGV~vCGP~~l~~~va~~c~~ 688 (713)
+--||+|||+.|.++|.+.+.+
T Consensus 602 ~~~vYvCGp~~M~~~V~~~L~~ 623 (688)
T 1tll_A 602 GGHIYVCGDVTMAADVLKAIQR 623 (688)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHH
T ss_pred CcEEEEeCCHHHHHHHHHHHHH
Confidence 3459999999999999998876
No 67
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=36.67 E-value=14 Score=36.72 Aligned_cols=23 Identities=26% Similarity=0.544 Sum_probs=18.2
Q ss_pred ceEEEEEeCchhhHHH-HHHHHhh
Q 005126 666 SDIGVLVCGPESMKES-VAKTSQR 688 (713)
Q Consensus 666 ~~vGV~vCGP~~l~~~-va~~c~~ 688 (713)
.+.-||+|||+.|.++ +++...+
T Consensus 235 ~~~~vyvCGp~~m~~~~~~~~L~~ 258 (270)
T 2cnd_A 235 DDTLALACGPPPMIQFAISPNLEK 258 (270)
T ss_dssp SSEEEEEECCHHHHHTTTHHHHHT
T ss_pred CCEEEEEECCHHHHHHHHHHHHHH
Confidence 3567999999999996 5767665
No 68
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=32.95 E-value=17 Score=38.97 Aligned_cols=38 Identities=5% Similarity=0.033 Sum_probs=27.4
Q ss_pred eeEEEEEEec-----CCeEEEEEecCCCCccCCCeEEEEeCCC
Q 005126 312 TCILSARVFP-----SKAIELILPKHAGLKFTPTSVIFMKIPS 349 (713)
Q Consensus 312 ~~ivs~~~l~-----~~~v~l~l~~~~~~~~~pGQ~v~L~~P~ 349 (713)
..+++.+.+. .++..+++..+.+..|+||+++-|....
T Consensus 9 a~v~~n~~Lt~~~~~~~~~hie~~l~~~~~Y~~GD~l~v~p~N 51 (393)
T 4dql_A 9 TNVVASKELQQPGSARSTRHLEIELPKEASYQEGDHLGVIPRN 51 (393)
T ss_dssp EEEEEEEECSCTTCSCCEEEEEEECCTTCCCCTTCEEEECCCC
T ss_pred EEEEeEEEcCCCCCCceEEEEEEECCCCCccCCCCEEEEEccC
Confidence 3455666653 2567777776678999999999998654
No 69
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=29.06 E-value=21 Score=39.91 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=26.8
Q ss_pred eeEEEEEEec-----CCeEEEEEecCC-CCccCCCeEEEEeCCC
Q 005126 312 TCILSARVFP-----SKAIELILPKHA-GLKFTPTSVIFMKIPS 349 (713)
Q Consensus 312 ~~ivs~~~l~-----~~~v~l~l~~~~-~~~~~pGQ~v~L~~P~ 349 (713)
..+++.+.+. .++..+++..+. ++.|+||+++-|..+.
T Consensus 117 a~v~~~~~Lt~~~~~r~v~hield~~~~~l~Y~~GD~l~V~P~N 160 (539)
T 2qtl_A 117 VPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPN 160 (539)
T ss_dssp EEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECCC
T ss_pred EEEEeeEEcCCCCCCCcEEEEEEecCCCCcCcCCCCEEEEEeCC
Confidence 4556666663 256777776543 5799999999998764
No 70
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=28.99 E-value=21 Score=39.03 Aligned_cols=38 Identities=8% Similarity=0.176 Sum_probs=26.4
Q ss_pred eeEEEEEEec----CCeEEEEEecC-CCCccCCCeEEEEeCCC
Q 005126 312 TCILSARVFP----SKAIELILPKH-AGLKFTPTSVIFMKIPS 349 (713)
Q Consensus 312 ~~ivs~~~l~----~~~v~l~l~~~-~~~~~~pGQ~v~L~~P~ 349 (713)
..+++.+.+. .++..+++.-+ .++.|+||+++-|....
T Consensus 65 a~v~~n~~Lt~~~~r~~~hie~dl~~s~l~Y~~GD~l~V~p~N 107 (458)
T 3qfs_A 65 AAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPAN 107 (458)
T ss_dssp EEEEEEEECCSSSSSCEEEEEEECTTSCCCCCTTCEEEECCCC
T ss_pred EEEEEEEEcCCCCCCCEEEEEEEeCCCCcccCCCCEEEEEeeC
Confidence 3455566553 35677777653 46899999999998654
No 71
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=27.36 E-value=24 Score=40.67 Aligned_cols=38 Identities=11% Similarity=0.126 Sum_probs=26.0
Q ss_pred eeEEEEEEec----CCeEEEEEecC-CCCccCCCeEEEEeCCC
Q 005126 312 TCILSARVFP----SKAIELILPKH-AGLKFTPTSVIFMKIPS 349 (713)
Q Consensus 312 ~~ivs~~~l~----~~~v~l~l~~~-~~~~~~pGQ~v~L~~P~ 349 (713)
..+++.+.+. .++..+++..+ .+..|+||+++-|....
T Consensus 262 a~v~~~~~L~~~~~~~~~hie~d~~~~~~~Y~~GD~l~V~P~N 304 (682)
T 2bpo_A 262 APIVKSRELFSSNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSN 304 (682)
T ss_dssp EEEEEEEECCCCSSCCEEEEEEECTTBTCCCCTTCEEEECCCC
T ss_pred EEEEEEEEccCCCCCCEEEEEEEcCCCCceecCCCEEEEEcCC
Confidence 3455566552 34677777643 37899999999998654
No 72
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=26.84 E-value=24 Score=40.18 Aligned_cols=37 Identities=8% Similarity=0.175 Sum_probs=25.2
Q ss_pred eEEEEEEec----CCeEEEEEecC-CCCccCCCeEEEEeCCC
Q 005126 313 CILSARVFP----SKAIELILPKH-AGLKFTPTSVIFMKIPS 349 (713)
Q Consensus 313 ~ivs~~~l~----~~~v~l~l~~~-~~~~~~pGQ~v~L~~P~ 349 (713)
.+++.+.+. .++..+++..+ .+..|+||+++-|..+.
T Consensus 226 ~v~~n~~Lt~~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N 267 (618)
T 3qe2_A 226 AVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPAN 267 (618)
T ss_dssp EEEEEEECSCCSSSCEEEEEEECTTSCCCCCTTCEEEECCCC
T ss_pred EEEeEEEcCCCCCCcEEEEEEEcCCCCcccccCCEEEEEcCC
Confidence 445555553 35677777654 36899999999997643
No 73
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=25.32 E-value=35 Score=31.35 Aligned_cols=19 Identities=16% Similarity=0.008 Sum_probs=15.3
Q ss_pred CCeeEEcCcchHHHHHHHH
Q 005126 524 QSNYAVNGLESLIWMAALV 542 (713)
Q Consensus 524 ~~~~~vcGp~~~~~~a~~~ 542 (713)
...+|+|||++|+..+.-.
T Consensus 147 ~~~v~~CGP~~m~~~v~~~ 165 (186)
T 3a1f_A 147 RIGVFLCGPEALAETLSKQ 165 (186)
T ss_dssp EEEEEEESCHHHHHHHHHH
T ss_pred cEEEEEeCCHHHHHHHHHH
Confidence 4578999999999877554
Done!