Query 005128
Match_columns 713
No_of_seqs 356 out of 1720
Neff 5.4
Searched_HMMs 46136
Date Thu Mar 28 18:30:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005128.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005128hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0520 Uncharacterized conser 100.0 2E-105 4E-110 922.7 28.5 618 6-705 16-668 (975)
2 PF03859 CG-1: CG-1 domain; I 100.0 3.1E-63 6.6E-68 451.9 10.1 117 19-136 2-118 (118)
3 cd01175 IPT_COE IPT domain of 99.6 3.5E-15 7.6E-20 128.9 8.9 80 440-526 2-83 (85)
4 KOG4412 26S proteasome regulat 99.6 8.7E-15 1.9E-19 143.7 9.0 83 627-709 121-203 (226)
5 PF12796 Ank_2: Ankyrin repeat 99.4 2.9E-12 6.3E-17 111.1 10.5 78 627-708 12-89 (89)
6 KOG0512 Fetal globin-inducing 99.3 6.9E-12 1.5E-16 122.8 9.3 102 609-712 62-164 (228)
7 KOG4412 26S proteasome regulat 99.2 9.9E-12 2.1E-16 122.4 7.1 84 627-710 87-171 (226)
8 PF01833 TIG: IPT/TIG domain; 99.2 6.3E-11 1.4E-15 101.5 9.5 83 440-526 2-85 (85)
9 PF13637 Ank_4: Ankyrin repeat 99.2 3E-11 6.6E-16 96.5 6.7 54 645-698 1-54 (54)
10 PF13857 Ank_5: Ankyrin repeat 99.2 2.6E-11 5.6E-16 98.2 4.9 54 632-685 2-56 (56)
11 PHA02736 Viral ankyrin protein 99.2 1.2E-10 2.6E-15 111.4 10.2 78 628-705 74-153 (154)
12 KOG0515 p53-interacting protei 99.2 5.5E-11 1.2E-15 131.3 8.6 95 610-706 550-644 (752)
13 KOG0509 Ankyrin repeat and DHH 99.1 5.3E-11 1.2E-15 134.7 7.8 91 617-709 85-176 (600)
14 PHA02743 Viral ankyrin protein 99.1 1.8E-10 3.9E-15 112.6 10.5 81 627-707 75-157 (166)
15 PHA02875 ankyrin repeat protei 99.1 2.3E-10 4.9E-15 125.9 11.7 82 627-708 117-198 (413)
16 KOG0509 Ankyrin repeat and DHH 99.1 1.1E-10 2.4E-15 132.2 9.2 94 615-709 116-209 (600)
17 PHA02884 ankyrin repeat protei 99.1 2.6E-10 5.6E-15 122.2 11.5 84 626-709 47-135 (300)
18 PHA02859 ankyrin repeat protei 99.1 3E-10 6.4E-15 115.1 10.5 84 626-709 104-190 (209)
19 PHA02791 ankyrin-like protein; 99.1 3E-10 6.5E-15 120.9 11.0 78 626-703 75-153 (284)
20 PHA02743 Viral ankyrin protein 99.1 2.1E-10 4.5E-15 112.2 9.0 83 627-709 39-126 (166)
21 PHA02795 ankyrin-like protein; 99.1 2.3E-10 5E-15 127.7 10.4 83 625-707 201-291 (437)
22 PHA02946 ankyin-like protein; 99.1 2.5E-10 5.3E-15 128.4 10.2 82 625-706 52-135 (446)
23 KOG4214 Myotrophin and similar 99.1 1.6E-10 3.6E-15 103.0 6.6 76 632-708 22-97 (117)
24 PHA02741 hypothetical protein; 99.1 6.4E-10 1.4E-14 108.7 10.3 73 635-707 50-128 (169)
25 PHA02878 ankyrin repeat protei 99.1 4.8E-10 1E-14 126.2 10.5 96 613-709 170-266 (477)
26 PHA03095 ankyrin-like protein; 99.1 4.6E-10 1E-14 125.0 10.1 81 626-706 238-318 (471)
27 PHA02859 ankyrin repeat protei 99.0 8.1E-10 1.8E-14 111.9 10.5 85 625-709 66-156 (209)
28 KOG0508 Ankyrin repeat protein 99.0 2E-10 4.3E-15 126.1 6.0 82 627-708 132-213 (615)
29 cd01179 IPT_plexin_repeat2 Sec 99.0 1.6E-09 3.4E-14 95.1 10.5 83 440-528 2-85 (85)
30 cd00102 IPT Immunoglobulin-lik 99.0 2E-09 4.3E-14 93.4 10.2 83 440-527 2-88 (89)
31 PHA02878 ankyrin repeat protei 99.0 1.3E-09 2.7E-14 122.9 11.3 93 614-709 204-298 (477)
32 PHA02791 ankyrin-like protein; 99.0 1.1E-09 2.3E-14 116.6 9.9 84 625-710 107-192 (284)
33 KOG0195 Integrin-linked kinase 99.0 5.1E-10 1.1E-14 116.7 7.2 96 614-710 37-132 (448)
34 PHA03095 ankyrin-like protein; 99.0 1.3E-09 2.8E-14 121.4 10.4 98 613-710 49-151 (471)
35 PHA02874 ankyrin repeat protei 99.0 1.6E-09 3.4E-14 120.6 10.6 96 613-709 126-221 (434)
36 PHA02874 ankyrin repeat protei 99.0 2E-09 4.3E-14 119.8 11.4 64 627-690 172-235 (434)
37 PLN03192 Voltage-dependent pot 99.0 2E-09 4.4E-14 129.4 11.7 86 613-700 528-613 (823)
38 PHA02798 ankyrin-like protein; 99.0 1.5E-09 3.2E-14 122.9 9.9 83 625-707 89-177 (489)
39 PHA02798 ankyrin-like protein; 99.0 1.4E-09 3E-14 123.1 9.4 86 624-709 50-143 (489)
40 PHA03100 ankyrin repeat protei 99.0 1.6E-09 3.5E-14 121.0 9.4 83 625-707 230-312 (480)
41 PHA02730 ankyrin-like protein; 99.0 1.9E-09 4.2E-14 125.6 10.2 78 629-706 24-107 (672)
42 PLN03192 Voltage-dependent pot 98.9 3.8E-09 8.3E-14 127.1 11.7 96 613-709 560-686 (823)
43 KOG4177 Ankyrin [Cell wall/mem 98.9 2E-09 4.4E-14 130.3 9.2 82 626-707 521-602 (1143)
44 PTZ00322 6-phosphofructo-2-kin 98.9 3.8E-09 8.3E-14 124.4 11.3 81 626-706 96-183 (664)
45 PHA02741 hypothetical protein; 98.9 3.4E-09 7.4E-14 103.5 8.9 78 626-703 78-157 (169)
46 PHA03100 ankyrin repeat protei 98.9 4.6E-09 9.9E-14 117.4 10.8 94 615-709 180-281 (480)
47 PHA02875 ankyrin repeat protei 98.9 7E-09 1.5E-13 114.2 10.7 82 626-707 149-231 (413)
48 PHA02716 CPXV016; CPX019; EVM0 98.9 6.2E-09 1.3E-13 123.3 10.4 86 624-709 154-245 (764)
49 PHA02989 ankyrin repeat protei 98.9 6E-09 1.3E-13 118.1 9.4 75 632-706 243-317 (494)
50 KOG0502 Integral membrane anky 98.9 1.7E-09 3.8E-14 109.5 4.4 83 626-708 174-256 (296)
51 PHA02989 ankyrin repeat protei 98.8 1.2E-08 2.5E-13 115.8 10.8 80 627-706 90-175 (494)
52 PHA02716 CPXV016; CPX019; EVM0 98.8 8.4E-09 1.8E-13 122.2 9.8 84 626-709 193-315 (764)
53 COG0666 Arp FOG: Ankyrin repea 98.8 1.5E-08 3.2E-13 98.2 9.8 81 629-709 90-178 (235)
54 KOG0510 Ankyrin repeat protein 98.8 5.1E-09 1.1E-13 121.2 7.2 84 627-710 321-409 (929)
55 KOG1710 MYND Zn-finger and ank 98.8 1.1E-08 2.3E-13 107.0 8.6 96 610-707 12-108 (396)
56 KOG0514 Ankyrin repeat protein 98.8 7.7E-09 1.7E-13 111.0 7.3 81 625-706 320-402 (452)
57 PHA02946 ankyin-like protein; 98.8 2.6E-08 5.5E-13 112.2 10.7 81 627-708 87-170 (446)
58 PHA02876 ankyrin repeat protei 98.8 2.5E-08 5.4E-13 117.3 10.8 82 625-706 158-239 (682)
59 KOG0505 Myosin phosphatase, re 98.8 1E-08 2.2E-13 114.6 6.4 77 633-709 186-262 (527)
60 PHA02736 Viral ankyrin protein 98.7 7.8E-09 1.7E-13 98.9 4.9 70 640-709 50-124 (154)
61 KOG0505 Myosin phosphatase, re 98.7 1.2E-08 2.5E-13 114.1 6.1 80 628-707 56-135 (527)
62 cd00603 IPT_PCSR IPT domain of 98.7 8.1E-08 1.8E-12 84.3 10.2 84 440-527 2-89 (90)
63 PHA02876 ankyrin repeat protei 98.7 3.9E-08 8.5E-13 115.7 10.8 84 626-709 356-440 (682)
64 PHA02917 ankyrin-like protein; 98.7 3.7E-08 8.1E-13 116.0 9.4 85 625-709 116-227 (661)
65 KOG4177 Ankyrin [Cell wall/mem 98.7 2.5E-08 5.4E-13 121.0 7.7 79 625-703 553-631 (1143)
66 PHA02730 ankyrin-like protein; 98.7 4.3E-08 9.4E-13 114.6 9.3 80 627-706 444-526 (672)
67 PHA02795 ankyrin-like protein; 98.7 4.6E-08 9.9E-13 109.5 9.1 84 626-709 163-252 (437)
68 KOG0508 Ankyrin repeat protein 98.7 2E-08 4.3E-13 110.7 5.8 84 625-708 97-180 (615)
69 PHA02917 ankyrin-like protein; 98.7 7.6E-08 1.7E-12 113.4 10.5 80 626-705 433-513 (661)
70 smart00429 IPT ig-like, plexin 98.7 9.3E-08 2E-12 83.8 8.5 84 439-527 2-90 (90)
71 PHA02792 ankyrin-like protein; 98.7 5.7E-08 1.2E-12 112.7 9.0 84 626-709 353-441 (631)
72 PF13857 Ank_5: Ankyrin repeat 98.6 2.6E-08 5.6E-13 80.7 3.7 46 664-709 1-47 (56)
73 cd01180 IPT_plexin_repeat1 Fir 98.6 2E-07 4.3E-12 83.6 9.6 87 440-528 2-94 (94)
74 PHA02884 ankyrin repeat protei 98.6 1.2E-07 2.7E-12 101.7 9.4 73 626-698 84-157 (300)
75 KOG0510 Ankyrin repeat protein 98.5 1.2E-07 2.6E-12 110.1 7.3 92 613-705 275-368 (929)
76 cd00204 ANK ankyrin repeats; 98.5 6.9E-07 1.5E-11 79.0 10.5 83 626-708 21-103 (126)
77 KOG0502 Integral membrane anky 98.5 1.9E-07 4.1E-12 95.0 6.6 75 634-708 149-223 (296)
78 KOG0705 GTPase-activating prot 98.5 5.1E-07 1.1E-11 101.5 10.1 96 608-705 622-721 (749)
79 PF12796 Ank_2: Ankyrin repeat 98.5 5.3E-07 1.1E-11 78.1 7.8 56 649-708 1-56 (89)
80 KOG0195 Integrin-linked kinase 98.4 2.5E-07 5.3E-12 97.0 6.2 72 636-707 25-96 (448)
81 TIGR00870 trp transient-recept 98.4 6.6E-07 1.4E-11 106.6 10.7 100 610-709 81-206 (743)
82 PHA02792 ankyrin-like protein; 98.4 3.9E-07 8.3E-12 105.9 8.1 79 627-705 392-480 (631)
83 KOG0514 Ankyrin repeat protein 98.4 5.2E-07 1.1E-11 97.2 7.2 74 627-700 355-429 (452)
84 PF00023 Ank: Ankyrin repeat H 98.4 4.2E-07 9.1E-12 65.8 4.2 33 677-709 1-33 (33)
85 COG0666 Arp FOG: Ankyrin repea 98.4 8E-07 1.7E-11 86.1 7.5 77 625-701 124-203 (235)
86 cd02849 CGTase_C_term Cgtase ( 98.3 3.1E-06 6.8E-11 74.3 9.6 79 439-526 3-81 (81)
87 KOG0512 Fetal globin-inducing 98.3 1.2E-06 2.6E-11 86.5 7.4 83 615-698 101-184 (228)
88 cd01181 IPT_plexin_repeat3 Thi 98.3 2.4E-06 5.2E-11 77.6 8.5 72 440-514 2-81 (99)
89 KOG0783 Uncharacterized conser 98.3 2.7E-07 5.8E-12 106.9 2.4 72 638-709 45-117 (1267)
90 KOG0507 CASK-interacting adapt 98.3 5.3E-07 1.1E-11 104.2 4.6 93 614-708 53-145 (854)
91 PF13606 Ank_3: Ankyrin repeat 98.3 8.7E-07 1.9E-11 63.4 4.0 29 677-705 1-29 (30)
92 TIGR00870 trp transient-recept 98.3 3.5E-06 7.7E-11 100.4 11.4 87 617-708 59-158 (743)
93 cd00204 ANK ankyrin repeats; 98.3 3.9E-06 8.4E-11 74.1 8.7 67 641-707 3-69 (126)
94 PTZ00322 6-phosphofructo-2-kin 98.2 3.3E-06 7.1E-11 99.9 7.9 62 648-709 85-146 (664)
95 KOG0818 GTPase-activating prot 98.1 1.3E-05 2.7E-10 89.3 9.3 73 629-701 150-223 (669)
96 KOG0522 Ankyrin repeat protein 98.0 9.4E-06 2E-10 91.2 7.5 66 635-700 45-110 (560)
97 KOG0506 Glutaminase (contains 98.0 4.1E-06 8.8E-11 92.8 4.5 76 627-702 521-597 (622)
98 PF00023 Ank: Ankyrin repeat H 98.0 9.1E-06 2E-10 58.7 4.5 33 644-676 1-33 (33)
99 cd00604 IPT_CGTD IPT domain (d 98.0 4.6E-05 9.9E-10 67.0 9.6 79 440-527 2-80 (81)
100 KOG1710 MYND Zn-finger and ank 97.9 2.7E-05 5.8E-10 82.2 7.8 85 612-698 47-132 (396)
101 PF13606 Ank_3: Ankyrin repeat 97.9 1.4E-05 3.1E-10 57.1 4.0 30 644-673 1-30 (30)
102 KOG3676 Ca2+-permeable cation 97.8 5.9E-05 1.3E-09 88.5 8.8 96 613-709 186-306 (782)
103 KOG4214 Myotrophin and similar 97.7 3.9E-05 8.4E-10 69.2 4.5 62 649-711 6-67 (117)
104 KOG4369 RTK signaling protein 97.6 3.4E-05 7.4E-10 92.1 2.7 82 624-705 769-851 (2131)
105 PF13637 Ank_4: Ankyrin repeat 97.6 0.00019 4.1E-09 57.2 6.1 40 626-665 15-54 (54)
106 KOG0507 CASK-interacting adapt 97.6 0.00011 2.4E-09 85.6 6.6 74 627-700 97-170 (854)
107 KOG0511 Ankyrin repeat protein 97.5 0.00013 2.8E-09 79.3 6.2 59 646-704 37-95 (516)
108 KOG3676 Ca2+-permeable cation 97.3 0.00055 1.2E-08 80.6 7.9 76 625-700 253-330 (782)
109 KOG2384 Major histocompatibili 97.2 0.00061 1.3E-08 68.6 6.2 66 635-700 2-68 (223)
110 KOG0782 Predicted diacylglycer 97.1 0.00075 1.6E-08 76.4 6.6 95 610-706 866-962 (1004)
111 KOG4369 RTK signaling protein 97.1 0.00041 8.8E-09 83.4 4.4 86 625-710 870-958 (2131)
112 cd00602 IPT_TF IPT domain of e 96.4 0.014 3.1E-07 53.5 8.1 82 440-527 2-100 (101)
113 smart00248 ANK ankyrin repeats 96.3 0.0073 1.6E-07 39.0 4.0 29 677-705 1-29 (30)
114 KOG0506 Glutaminase (contains 96.2 0.0036 7.8E-08 70.1 3.3 68 641-708 502-570 (622)
115 KOG0521 Putative GTPase activa 96.1 0.0034 7.4E-08 75.6 3.2 70 628-697 672-741 (785)
116 KOG0818 GTPase-activating prot 95.9 0.013 2.7E-07 66.2 6.2 67 640-706 122-195 (669)
117 KOG0522 Ankyrin repeat protein 95.9 0.0083 1.8E-07 68.2 4.7 63 647-709 22-86 (560)
118 KOG0521 Putative GTPase activa 95.8 0.0073 1.6E-07 72.9 4.2 72 635-706 644-717 (785)
119 KOG0783 Uncharacterized conser 95.8 0.012 2.5E-07 69.8 5.5 57 631-687 71-128 (1267)
120 KOG3610 Plexins (functional se 95.5 0.036 7.8E-07 68.1 8.3 93 433-530 137-232 (1025)
121 KOG0515 p53-interacting protei 95.3 0.028 6E-07 64.0 5.8 60 648-707 553-612 (752)
122 cd01178 IPT_NFAT IPT domain of 95.2 0.091 2E-06 48.3 7.8 81 439-527 2-100 (101)
123 cd01176 IPT_RBP-Jkappa IPT dom 94.8 0.11 2.5E-06 46.6 7.1 66 455-527 20-96 (97)
124 cd01177 IPT_NFkappaB IPT domai 94.7 0.13 2.7E-06 47.4 7.5 82 440-527 2-101 (102)
125 KOG3609 Receptor-activated Ca2 94.7 0.031 6.7E-07 66.7 4.5 32 675-706 128-159 (822)
126 KOG0782 Predicted diacylglycer 94.6 0.054 1.2E-06 61.9 5.9 88 612-700 900-989 (1004)
127 smart00248 ANK ankyrin repeats 94.2 0.088 1.9E-06 33.7 4.0 29 644-672 1-29 (30)
128 KOG0520 Uncharacterized conser 93.7 0.029 6.3E-07 68.1 1.6 70 631-700 627-702 (975)
129 KOG2505 Ankyrin repeat protein 92.8 0.13 2.8E-06 58.4 4.8 61 626-686 405-471 (591)
130 KOG0705 GTPase-activating prot 91.6 0.25 5.4E-06 57.1 5.3 58 651-708 630-691 (749)
131 KOG0511 Ankyrin repeat protein 90.8 0.64 1.4E-05 51.6 7.2 61 627-688 51-111 (516)
132 PF08549 SWI-SNF_Ssr4: Fungal 90.6 0.76 1.6E-05 54.3 8.0 103 27-137 30-155 (669)
133 KOG3836 HLH transcription fact 87.8 0.21 4.5E-06 58.2 0.9 58 440-512 244-302 (605)
134 KOG2505 Ankyrin repeat protein 82.7 1.7 3.6E-05 49.9 4.8 51 658-708 404-460 (591)
135 KOG3610 Plexins (functional se 72.0 4.4 9.6E-05 50.6 4.7 76 436-511 47-125 (1025)
136 KOG3836 HLH transcription fact 68.9 3.6 7.7E-05 48.3 2.8 37 439-482 323-359 (605)
137 PF06128 Shigella_OspC: Shigel 59.0 16 0.00036 38.5 5.1 47 657-703 229-279 (284)
138 PF14545 DBB: Dof, BCAP, and B 50.4 67 0.0015 31.6 7.5 70 444-518 3-80 (142)
139 PF12728 HTH_17: Helix-turn-he 44.3 17 0.00037 28.4 2.1 42 26-67 1-45 (51)
140 PF05587 Anth_Ig: Anthrax rece 40.4 9.3 0.0002 35.6 0.0 74 440-516 7-88 (105)
141 PF03158 DUF249: Multigene fam 39.6 45 0.00096 34.2 4.6 46 648-699 146-191 (192)
142 KOG3609 Receptor-activated Ca2 38.6 14 0.00031 45.0 1.2 84 612-704 27-114 (822)
143 PF03106 WRKY: WRKY DNA -bindi 38.6 14 0.0003 30.9 0.7 8 70-77 2-9 (60)
144 TIGR03437 Soli_cterm Solibacte 34.1 1.3E+02 0.0028 31.5 7.2 64 453-516 4-76 (215)
145 PF09099 Qn_am_d_aIII: Quinohe 31.0 1.6E+02 0.0035 26.2 6.2 63 440-511 3-70 (81)
146 smart00774 WRKY DNA binding do 29.9 19 0.00042 30.1 0.3 8 70-77 2-9 (59)
147 KOG3743 Recombination signal b 27.2 48 0.001 38.8 2.8 44 453-503 506-549 (622)
148 KOG1310 WD40 repeat protein [G 24.4 32 0.00069 40.4 0.8 116 8-134 170-304 (758)
149 PF01913 FTR: Formylmethanofur 24.4 36 0.00079 33.4 1.1 20 63-83 119-138 (144)
150 PF11929 DUF3447: Domain of un 20.0 1.7E+02 0.0037 25.0 4.3 47 647-700 8-54 (76)
No 1
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=100.00 E-value=2e-105 Score=922.68 Aligned_cols=618 Identities=35% Similarity=0.541 Sum_probs=403.9
Q ss_pred CCCCCCcccHHHHHHHHHHhhCChHHHHHHHHcccccccCCCCCCCCCCCceEeeehhhhhhhhccccceeecCCCcchH
Q 005128 6 RYVPNQQLDLEQILQEAQYRWLRPTEICEILRNYQKFHLTPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVK 85 (713)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~rwl~~~ei~~il~~~~~~~~~~~~~~~p~~gs~~l~~r~~~~~fr~dg~~w~kkk~g~~~~ 85 (713)
-|...+.||+..|++|++.|||+|+||++||+||++|.++.+||+||.+||+||||||+|||||||||+|||||||||+|
T Consensus 16 ~~~sl~~l~~~~ll~~~~~rWl~~~EI~~il~n~~~~~lt~~s~trp~sGS~flfnRk~lr~fRKDGh~WkKkkDGKtir 95 (975)
T KOG0520|consen 16 PFKSLQDLDIQTLLPEAKSRWLTPEEILAILINHEKFTLTVSSPTRPQSGSIFLFNRKVLRYFRKDGHNWKKKKDGKTIR 95 (975)
T ss_pred chhhhhhhhhhhhhHHHHhccCChHHHHHHHhcccccccccCCCCCCCCCceeeeccHHHHHHhhcchhhhhcCCCCcCh
Confidence 34556889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCEeeEEEEeeccccCccccceeeeeccCCCceEEEEeeeeccCCCCCCCCCCCCCCccccccccCcccccc
Q 005128 86 EAHEKLKAGSIDVLHCYYAHGEDNENFQRRSYWMLDGQLEHIVLVHYREVKEGYKSGRSAADPGSQIESSQTSSARSLAQ 165 (713)
Q Consensus 86 e~h~~lk~~~~~~~~~~y~h~~~~~~f~rr~y~~l~~~~~~ivlvhy~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 165 (713)
||||||||||+|+||||||||++||||||||||||++.++||||||||||++.+...+......+.+-|- ..
T Consensus 96 EaHe~LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~~~~~~~~~~~s~~sd---~~----- 167 (975)
T KOG0520|consen 96 EAHEKLKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNEDAAKGAGEIFSSIISD---KA----- 167 (975)
T ss_pred HHHHhhccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeecccccccccCccccccccccc---cc-----
Confidence 9999999999999999999999999999999999999999999999999996443222222211111000 00
Q ss_pred cCCCCCccCCCCCCCccccccCC-cccccccccccCCCCCCCCCccccccccccccchhhhhcccCCccccCCCCcccCC
Q 005128 166 ANSSAPAAQTSHASIPNKIDWNG-QAVSSEFEDVDSGHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSRHPQWFAGS 244 (713)
Q Consensus 166 ~~s~~~~~~~~~~~s~~~~~~~~-~~~~se~ed~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (713)
.+..+..+..+| .-- +. +..+|+++++..+.+..+.+..|.
T Consensus 168 ----~S~~~~~~q~~~----~~~~~~--s~~~~v~~i~s~~~~~~~g~~~~~---------------------------- 209 (975)
T KOG0520|consen 168 ----WSLNQLAGQLSP----IFHNHS--SVNEDVAEINSNQTGNALGSVFGN---------------------------- 209 (975)
T ss_pred ----ccHHHhhcccCc----chhccc--chHHHHHHHhhhccccccccccCc----------------------------
Confidence 011133333333 100 11 447777776655443333222110
Q ss_pred CCCCCCCCCCCCCCCCCc-cccccccccCCCCCcccCCCCCccccc--cccccc----ccccCccccccCccccccccc-
Q 005128 245 KINHGSGSSMWPQIDNSS-RNATSVLDQHGHQNFYVGQPSGADFIT--HKLTDA----RLASDSTIANIGTCGERLITD- 316 (713)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~- 316 (713)
...|.. +++..+... |..+...+.. ..+..|....+.. +..... ....... .|.+....+.+.+
T Consensus 210 --s~~h~i-~~~~~~s~~~~~~~p~s~~s----~~~~~~~~~~~~~~~~~~~~rs~~~s~~te~l-~n~~~~~~~~g~s~ 281 (975)
T KOG0520|consen 210 --SRNHRI-RLHEVNSLDPLYKLPVSDDS----LNLSAPKPIDLPKGPTSVKQRSSSPSYFTEIL-GNAPSGLVSQGNSL 281 (975)
T ss_pred --chhhhh-cccccCCccccccccccCCc----cccccCCCcccccCCcchhhcCCCCcchhhhc-ccCCCccccccccc
Confidence 000000 011111111 2222222110 0000000000000 000000 0000000 0000000000000
Q ss_pred -c---ccccccccccccchhhhccccccccccccCCCCCccc--cc----cccc-cC---CCCcc--ccccccccCcchh
Q 005128 317 -I---DVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVT--VA----SVSQ-AG---IKPKE--ELGELKKLDSFGR 380 (713)
Q Consensus 317 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~-~~---~~~~~--~~~~lkk~dSf~r 380 (713)
+ ....|+.........+.-.+|..+++........... .. ..+. .. ...+. .++|||+.|||+|
T Consensus 282 s~~l~~i~~~~~~~~~~~~~p~~~nf~~~ss~~s~~~~~~~g~g~~~~~~sa~~~~~P~~~~~~~~~~~~~l~sgdsf~~ 361 (975)
T KOG0520|consen 282 SSSLQRISSFTGLDNAAYEQPNSQNFEPNSSLNSHVTGQSYGQGLQARSPSATSESRPITSAADAALSELGLKSGDSFSR 361 (975)
T ss_pred ccchhhcccccccccccccCCccccccccccCCCCccccccCccccCCCcccccccCCcchhhccccccccccccccccc
Confidence 0 0001110000000000001111111111000000000 00 0000 11 11221 2789999999999
Q ss_pred hhhhhhccCcCCCcccCCC-CCcccccccccCCcccccccccccccccccCCCcccCCceEEEeecCCCccCCCCeEEEE
Q 005128 381 WMDQEIGGDCDDSLMASDS-GNYWNTLDAENDDKEVSSLSHHMQLEMDSLGPSLSQEQLFSIRDFSPDWAYSGAETKVLI 459 (713)
Q Consensus 381 wm~~el~~~~~~~~~~~ss-~~~w~~~~~~~~~~~~s~~~~~~~ld~~~~~~s~sq~qlfsI~d~SP~wgy~~ggtKVlI 459 (713)
||+ .+++ ..|.. ++++ +.+|.... +...+.+ ..++|| +++|+|+|+||||+|+|++||+||+|
T Consensus 362 ~~~-t~~e-~~d~~-q~~s~~~~~~p~~--~~~~~~~----------s~~~~S-~p~qlf~I~DfSP~Wsy~~ggvKVlV 425 (975)
T KOG0520|consen 362 WAS-TFGE-ISDLG-QDPSGEAVWTPEN--DPMGPPG----------SFLSPS-SPEQLFTITDFSPEWSYLDGGVKVLV 425 (975)
T ss_pred hhh-hhcc-cccCC-CCCccccccccCC--CcCCCcc----------cccCCC-CCcceeeeeccCcccccCCCCcEEEE
Confidence 996 7777 44444 3333 55676662 2222221 226777 44999999999999999999999999
Q ss_pred EeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCCCCCceeEEEEEeC-CccccccceeeeecCCCCCCCCCcc
Q 005128 460 IGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGS-NRLACSEVREFEYREKPSKAGYPVA 538 (713)
Q Consensus 460 ~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PPh~pG~V~l~Vt~~-n~~~cSev~eFEYr~~~~~~~~~~~ 538 (713)
+|.+ ++.+..+|+||||+++|||++||+|||||+||||.||+|+|||+|+ ++.+|||+|+|+|...+.+..+..+
T Consensus 426 ~G~~----~~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V~l~V~c~~~~~~~se~ref~~~~~~~~~~d~~s 501 (975)
T KOG0520|consen 426 TGFP----QDETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVVNLQVTCRISGLACSEVREFAYLVQPSQQIDKLS 501 (975)
T ss_pred ecCc----cccCCCceEEEeCCccccHHHhhcceeeeecCccCCCeEEEEEEecccceeeeeehheeecccCcccccccc
Confidence 9983 4557889999999999999999999999999999999999999999 9999999999999998887765433
Q ss_pred ccCCChHHHHHHHHHHHhhccCC-ccccccccccccchhh--hhHHHhhhccCCCccccc-cccCcccccCCC---CchH
Q 005128 539 SKIAPEDEVRLQTRLAKFLYLDP-ERKWFDCTIEDCNKCK--LKNTIYSMRGDSEKDWGR-VDESPMAIEGDC---PNSR 611 (713)
Q Consensus 539 ~~~~~~~E~~Lq~Rl~~LL~l~~-~~~~~~~s~~~~ek~~--l~~ki~sl~~~~~d~w~~-l~dalk~~~~~~---~~~~ 611 (713)
. .....++.|+.|+..|+.-.. .......++...+..+ ++.++..+ .++|.. + ++...++. ..++
T Consensus 502 ~-~d~~~~~sl~~rl~~~~~r~~~~~~s~~~~~n~~~~~~~~l~skv~~l----~~~~~~r~---~~~~~~~~~~~~~~r 573 (975)
T KOG0520|consen 502 W-EDFLFQMSLLHRLETMLNRKQSILSSKPSTENTSDAESGNLASKVVHL----LNEWAYRL---LKSISENLSSSVNFR 573 (975)
T ss_pred c-ccchhhhHHHHHHHHHHHHhHhHhhccCCccccccccchhHHHHHHHH----HHHHHHHH---HhhHhhhccccCCCc
Confidence 1 222333445555555544111 1122344455555555 77777766 456766 5 33333332 7889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 005128 612 DKLIQNLLRNRLCEWLVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGS 690 (713)
Q Consensus 612 d~LLq~lLk~kl~ewLvekLle~-Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~ 690 (713)
+.+|+.++++.+++||++++++- |......|.+|++.+|++|.+|+.|++.+++..|..++++|.+||||||||+.+||
T Consensus 574 ~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~ 653 (975)
T KOG0520|consen 574 DMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGR 653 (975)
T ss_pred chHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhcCH
Confidence 99999999999999999999996 88888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcc
Q 005128 691 WEQLRVRLRIQHQHF 705 (713)
Q Consensus 691 ~eiV~lLL~~GADi~ 705 (713)
+++++.|++.|++.-
T Consensus 654 e~l~a~l~~lga~~~ 668 (975)
T KOG0520|consen 654 EKLVASLIELGADPG 668 (975)
T ss_pred HHHHHHHHHhccccc
Confidence 999999999998754
No 2
>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=100.00 E-value=3.1e-63 Score=451.90 Aligned_cols=117 Identities=67% Similarity=1.236 Sum_probs=114.6
Q ss_pred HHHHHHhhCChHHHHHHHHcccccccCCCCCCCCCCCceEeeehhhhhhhhccccceeecCCCcchHhhhhhcccCCEee
Q 005128 19 LQEAQYRWLRPTEICEILRNYQKFHLTPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSIDV 98 (713)
Q Consensus 19 ~~~~~~rwl~~~ei~~il~~~~~~~~~~~~~~~p~~gs~~l~~r~~~~~fr~dg~~w~kkk~g~~~~e~h~~lk~~~~~~ 98 (713)
++| ++|||+|+|||+||+||++|.+..+||+||+|||+||||||++||||||||+|||||||||||||||||||||+|+
T Consensus 2 ~~~-~~rWl~~~Ei~~IL~n~~~~~~~~~~~~rP~sGslfLf~Rk~~r~fRkDG~~WrKkkdgktvRE~HekLKv~~~e~ 80 (118)
T PF03859_consen 2 LKE-KTRWLKPEEIAFILLNYEKFQIWLEPPNRPPSGSLFLFNRKVVRFFRKDGHNWRKKKDGKTVREDHEKLKVGGVEV 80 (118)
T ss_pred chH-hcccCCHHHHHHHHHhHHhCCcccCCCCCCCCceEEEEEchHhhhhhcccceeEEcCCCCchhhhhhhhccCceee
Confidence 455 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccccCccccceeeeeccCCCceEEEEeeeecc
Q 005128 99 LHCYYAHGEDNENFQRRSYWMLDGQLEHIVLVHYREVK 136 (713)
Q Consensus 99 ~~~~y~h~~~~~~f~rr~y~~l~~~~~~ivlvhy~~~~ 136 (713)
|||||||||+||+||||||||||++|+||||||||||+
T Consensus 81 l~~~Yah~~~~~~F~RR~Ywll~~~~~~iVLVHY~~v~ 118 (118)
T PF03859_consen 81 LNCYYAHSEDNPTFHRRCYWLLDPPYEHIVLVHYLDVK 118 (118)
T ss_pred eEEEEEeeccCCCeeeEEEEccCCCCceEEEEEeeecC
Confidence 99999999999999999999999999999999999985
No 3
>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors. COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.
Probab=99.59 E-value=3.5e-15 Score=128.87 Aligned_cols=80 Identities=28% Similarity=0.442 Sum_probs=71.6
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCC-CCCceeEEEEEeCCcccc
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRLAC 518 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~pG~V~l~Vt~~n~~~c 518 (713)
.|++++|+||+++|||||+|+|.+|.+ ++.||||++.|-.|.|++.+|+|.+|| |.||.|.|+++.....-|
T Consensus 2 ~I~ai~P~eG~~tGGt~VtI~GenF~~-------gl~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~~~~~~~ 74 (85)
T cd01175 2 CIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFC 74 (85)
T ss_pred cccEecCCCCcccCCeEEEEECCCCCC-------CcEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEECceeec
Confidence 599999999999999999999998855 799999999999999999999999999 999999999999887766
Q ss_pred cc-ceeeee
Q 005128 519 SE-VREFEY 526 (713)
Q Consensus 519 Se-v~eFEY 526 (713)
.- .-.|-|
T Consensus 75 ~~~p~~f~y 83 (85)
T cd01175 75 KGTPGRFVY 83 (85)
T ss_pred cCCCceEEe
Confidence 43 344655
No 4
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=8.7e-15 Score=143.68 Aligned_cols=83 Identities=28% Similarity=0.230 Sum_probs=79.2
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
+...|++.|+.++..|+.|+||||.||+.|...++++|+..|+.+|.+|+.||||||.|...||.+.+.+|+++||++++
T Consensus 121 IaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~ 200 (226)
T KOG4412|consen 121 IAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDR 200 (226)
T ss_pred HHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHhccceee
Confidence 45678899999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred cCc
Q 005128 707 EGK 709 (713)
Q Consensus 707 ~~k 709 (713)
++|
T Consensus 201 edk 203 (226)
T KOG4412|consen 201 EDK 203 (226)
T ss_pred ccc
Confidence 876
No 5
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.38 E-value=2.9e-12 Score=111.07 Aligned_cols=78 Identities=26% Similarity=0.341 Sum_probs=69.8
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
+++.+++.+.+++. |.||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+++|+++..
T Consensus 12 ~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 12 ILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNI 87 (89)
T ss_dssp HHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTS
T ss_pred HHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 56677777877775 89999999999999999999999999999999999999999999999999999999999987
Q ss_pred cC
Q 005128 707 EG 708 (713)
Q Consensus 707 ~~ 708 (713)
++
T Consensus 88 ~n 89 (89)
T PF12796_consen 88 RN 89 (89)
T ss_dssp S-
T ss_pred cC
Confidence 63
No 6
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.30 E-value=6.9e-12 Score=122.76 Aligned_cols=102 Identities=22% Similarity=0.170 Sum_probs=86.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCCC-CCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 005128 609 NSRDKLIQNLLRNRLCEWLVWKIHEGGK-GPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY 687 (713)
Q Consensus 609 ~~~d~LLq~lLk~kl~ewLvekLle~Ga-d~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~ 687 (713)
+....++-...++++. .+++|++..+ -+|.+|.+|.||||.|+..||..+|..|+..|++++++...||||||-||.
T Consensus 62 dp~rl~lwaae~nrl~--eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAck 139 (228)
T KOG0512|consen 62 DPIRLLLWAAEKNRLT--EVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACK 139 (228)
T ss_pred CHHHHHHHHHhhccHH--HHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhc
Confidence 3445556666666654 4566665444 478999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCccccCcccc
Q 005128 688 FGSWEQLRVRLRIQHQHFLEGKLLL 712 (713)
Q Consensus 688 ~G~~eiV~lLL~~GADi~~~~kl~~ 712 (713)
.++.+|+.+||.+|||+...+|=++
T Consensus 140 WnN~~va~~LLqhgaDVnA~t~g~l 164 (228)
T KOG0512|consen 140 WNNFEVAGRLLQHGADVNAQTKGLL 164 (228)
T ss_pred ccchhHHHHHHhccCcccccccccc
Confidence 9999999999999999998766443
No 7
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.25 E-value=9.9e-12 Score=122.41 Aligned_cols=84 Identities=23% Similarity=0.304 Sum_probs=50.1
Q ss_pred HHHHHHhC-CCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 627 LVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 627 LvekLle~-Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
+++.|+.. |+++|.....|+|+|||||..|..+++.+|++.|+.++.+|..|.||||-||.-|..+++.+|+..||.+.
T Consensus 87 vVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n 166 (226)
T KOG4412|consen 87 VVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLN 166 (226)
T ss_pred HHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCC
Confidence 44444444 56666666666666666666666666666666666666666666666666666666666666666666655
Q ss_pred ccCcc
Q 005128 706 LEGKL 710 (713)
Q Consensus 706 ~~~kl 710 (713)
..+|+
T Consensus 167 ~qDk~ 171 (226)
T KOG4412|consen 167 TQDKY 171 (226)
T ss_pred ccccc
Confidence 55553
No 8
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=99.21 E-value=6.3e-11 Score=101.48 Aligned_cols=83 Identities=22% Similarity=0.370 Sum_probs=75.1
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceE-eeecceeeeecCCCCCceeEEEEEeCCcccc
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAE-VLTDNVIRCQAPSHAAGRVPFYITGSNRLAC 518 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae-i~q~GVLrC~~PPh~pG~V~l~Vt~~n~~~c 518 (713)
.|++|+|+|++..||++|+|.|.+|.. ....+.|+||+.+.++. .+.+..|+|.+|++.+|.++++|..++...+
T Consensus 2 ~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~~ 77 (85)
T PF01833_consen 2 VITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQIY 77 (85)
T ss_dssp EEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEEE
T ss_pred EEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCeE
Confidence 699999999999999999999999932 24589999999999988 9999999999999999999999999998888
Q ss_pred ccceeeee
Q 005128 519 SEVREFEY 526 (713)
Q Consensus 519 Sev~eFEY 526 (713)
++...|+|
T Consensus 78 ~~~~~F~Y 85 (85)
T PF01833_consen 78 SNNTSFTY 85 (85)
T ss_dssp EEEEEEEE
T ss_pred ECCeeeEC
Confidence 99999998
No 9
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.21 E-value=3e-11 Score=96.51 Aligned_cols=54 Identities=30% Similarity=0.436 Sum_probs=46.9
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHH
Q 005128 645 GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRL 698 (713)
Q Consensus 645 G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL 698 (713)
|+||||+||..|+.+++++|++.|+++|.+|.+|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 789999999999999999999999999999999999999999999999999996
No 10
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.17 E-value=2.6e-11 Score=98.21 Aligned_cols=54 Identities=35% Similarity=0.522 Sum_probs=33.6
Q ss_pred HhCC-CCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHH
Q 005128 632 HEGG-KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWA 685 (713)
Q Consensus 632 le~G-ad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~A 685 (713)
++.| +++|..|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|
T Consensus 2 L~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 2 LEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp ----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 4556 88999999999999999999999999999999999999999999999997
No 11
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.17 E-value=1.2e-10 Score=111.44 Aligned_cols=78 Identities=14% Similarity=-0.066 Sum_probs=72.4
Q ss_pred HHHHHhCCCCCCccc-CCCCcHHHHHHHhCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 628 VWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIA-TGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 628 vekLle~Gad~N~~D-~~G~TpLHlAA~lG~~~~V~lLL~-~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
++.|++.|+++|..| ..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||+|+..|+.+++++|+..||+..
T Consensus 74 v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 74 LKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 455778899999998 599999999999999999999998 599999999999999999999999999999999999865
No 12
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=5.5e-11 Score=131.34 Aligned_cols=95 Identities=23% Similarity=0.209 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Q 005128 610 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 689 (713)
Q Consensus 610 ~~d~LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G 689 (713)
..-.||...|...|. |+++++..-.|+...+..|-|+||-|...||..+|++|+..|++||+.|.+||||||+||.|+
T Consensus 550 PLaLLLDaaLeGEld--lVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCN 627 (752)
T KOG0515|consen 550 PLALLLDAALEGELD--LVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCN 627 (752)
T ss_pred hHHHHHhhhhcchHH--HHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcC
Confidence 344566666666554 666666666788888999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCccc
Q 005128 690 SWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 690 ~~eiV~lLL~~GADi~~ 706 (713)
+..+++.|++.||-++.
T Consensus 628 nv~~ckqLVe~GaavfA 644 (752)
T KOG0515|consen 628 NVPMCKQLVESGAAVFA 644 (752)
T ss_pred chHHHHHHHhccceEEe
Confidence 99999999999999875
No 13
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.15 E-value=5.3e-11 Score=134.67 Aligned_cols=91 Identities=25% Similarity=0.288 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCccc-CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHH
Q 005128 617 NLLRNRLCEWLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLR 695 (713)
Q Consensus 617 ~lLk~kl~ewLvekLle~Gad~N~~D-~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~ 695 (713)
.++.+++. +++.|+++|+++|..+ ..+.||||+||..|+..+|.+|+++||+++.+|.+|.||||.||.+||.-+|.
T Consensus 85 AAiNNrl~--v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~va 162 (600)
T KOG0509|consen 85 AAINNRLD--VARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVA 162 (600)
T ss_pred HHHcCcHH--HHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHH
Confidence 45666665 6788889999999887 77899999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCccccCc
Q 005128 696 VRLRIQHQHFLEGK 709 (713)
Q Consensus 696 lLL~~GADi~~~~k 709 (713)
+||..|+|+.+++.
T Consensus 163 yll~~~~d~d~~D~ 176 (600)
T KOG0509|consen 163 YLLSKGADIDLRDN 176 (600)
T ss_pred HHHHhcccCCCcCC
Confidence 99999999988764
No 14
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.15 E-value=1.8e-10 Score=112.58 Aligned_cols=81 Identities=15% Similarity=0.014 Sum_probs=74.7
Q ss_pred HHHHHHhCCCCCCccc-CCCCcHHHHHHHhCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 627 LVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIA-TGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 627 LvekLle~Gad~N~~D-~~G~TpLHlAA~lG~~~~V~lLL~-~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
+++.|++.|+++|.+| ..|.||||+|+..|+..++++|+. .|++++.+|..|+||||+|+..|+.+++++|+.+||++
T Consensus 75 ~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~ 154 (166)
T PHA02743 75 KIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVC 154 (166)
T ss_pred HHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 3566778899999998 589999999999999999999995 79999999999999999999999999999999999998
Q ss_pred ccc
Q 005128 705 FLE 707 (713)
Q Consensus 705 ~~~ 707 (713)
...
T Consensus 155 ~~~ 157 (166)
T PHA02743 155 DDP 157 (166)
T ss_pred CCc
Confidence 754
No 15
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.13 E-value=2.3e-10 Score=125.91 Aligned_cols=82 Identities=18% Similarity=0.166 Sum_probs=60.2
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
+++.|++.|++++..+..|.||||+|+..|..+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+||++..
T Consensus 117 iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~ 196 (413)
T PHA02875 117 IMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDY 196 (413)
T ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCc
Confidence 55666677777777777777777777777777777777777777777777777777777777777777777777777765
Q ss_pred cC
Q 005128 707 EG 708 (713)
Q Consensus 707 ~~ 708 (713)
.+
T Consensus 197 ~~ 198 (413)
T PHA02875 197 FG 198 (413)
T ss_pred CC
Confidence 43
No 16
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.13 E-value=1.1e-10 Score=132.19 Aligned_cols=94 Identities=28% Similarity=0.375 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH
Q 005128 615 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQL 694 (713)
Q Consensus 615 Lq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV 694 (713)
|+-+..+. +..++..|+++|++|+.+|.+|.++||+||..|+.-.|.+|+..|+++|.+|.+|+|||||||+.|+...+
T Consensus 116 LHWAar~G-~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v 194 (600)
T KOG0509|consen 116 LHWAARNG-HISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFV 194 (600)
T ss_pred chHHHHcC-cHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHH
Confidence 44444444 45678899999999999999999999999999999999999999999999999999999999999999989
Q ss_pred HHHHHcCCCccccCc
Q 005128 695 RVRLRIQHQHFLEGK 709 (713)
Q Consensus 695 ~lLL~~GADi~~~~k 709 (713)
+.||..|+.+...++
T Consensus 195 ~~LL~f~a~~~~~d~ 209 (600)
T KOG0509|consen 195 RRLLKFGASLLLTDD 209 (600)
T ss_pred HHHHHhccccccccc
Confidence 999999999987764
No 17
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.13 E-value=2.6e-10 Score=122.20 Aligned_cols=84 Identities=15% Similarity=0.101 Sum_probs=76.5
Q ss_pred HHHHHHHhCCCCCCcc----cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHHc
Q 005128 626 WLVWKIHEGGKGPNVI----DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWASYFGSWEQLRVRLRI 700 (713)
Q Consensus 626 wLvekLle~Gad~N~~----D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD-~~G~TPLH~Aa~~G~~eiV~lLL~~ 700 (713)
-+++.|++.|+++|.. +..|.||||+||..|..+++++|+.+|+++|.++ ..|.||||+|+..|+.+++++|+.+
T Consensus 47 eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~ 126 (300)
T PHA02884 47 DIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSY 126 (300)
T ss_pred HHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 4677888999999987 4689999999999999999999999999999864 6899999999999999999999999
Q ss_pred CCCccccCc
Q 005128 701 QHQHFLEGK 709 (713)
Q Consensus 701 GADi~~~~k 709 (713)
||++..+++
T Consensus 127 GAdin~kd~ 135 (300)
T PHA02884 127 GADINIQTN 135 (300)
T ss_pred CCCCCCCCC
Confidence 999987654
No 18
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.11 E-value=3e-10 Score=115.13 Aligned_cols=84 Identities=13% Similarity=0.083 Sum_probs=76.1
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHH--hCCHHHHHHHHHcCCCCcccCCCCCcHHHH-HHHcCCHHHHHHHHHcCC
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAA--LGYEWAMRPIIATGVSPNFRDARGRTALHW-ASYFGSWEQLRVRLRIQH 702 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~--lG~~~~V~lLL~~GadvN~rD~~G~TPLH~-Aa~~G~~eiV~lLL~~GA 702 (713)
-+++.|++.|+++|..|..|+||||+|+. .++.+++++|+..|++++.+|..|.||||. |+..|+.+++++|+..|+
T Consensus 104 eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Ga 183 (209)
T PHA02859 104 EILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGI 183 (209)
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCC
Confidence 46778889999999999999999999876 468999999999999999999999999995 667899999999999999
Q ss_pred CccccCc
Q 005128 703 QHFLEGK 709 (713)
Q Consensus 703 Di~~~~k 709 (713)
++..+++
T Consensus 184 di~~~d~ 190 (209)
T PHA02859 184 DINETNK 190 (209)
T ss_pred CCCCCCC
Confidence 9998765
No 19
>PHA02791 ankyrin-like protein; Provisional
Probab=99.11 E-value=3e-10 Score=120.85 Aligned_cols=78 Identities=15% Similarity=0.094 Sum_probs=63.3
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCC-cHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR-TALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~-TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
-+++.|++.|++++..|..|+||||+||..|+.+++++|+..|++++.++..|+ ||||+|+..|+.++|++|+..+++
T Consensus 75 eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~ 153 (284)
T PHA02791 75 KIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS 153 (284)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCc
Confidence 356777778888888888888888888888888888888888888888888876 788888888888888888887654
No 20
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.11 E-value=2.1e-10 Score=112.15 Aligned_cols=83 Identities=20% Similarity=0.154 Sum_probs=73.0
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHH---HHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHH-cC
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWA---MRPIIATGVSPNFRD-ARGRTALHWASYFGSWEQLRVRLR-IQ 701 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~---V~lLL~~GadvN~rD-~~G~TPLH~Aa~~G~~eiV~lLL~-~G 701 (713)
+++.+.+.|+.++..|..|+||||+||..|.... +++|+..|+++|.+| ..|+||||+|+..|+.+++++|+. .|
T Consensus 39 ~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~g 118 (166)
T PHA02743 39 VAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLG 118 (166)
T ss_pred HHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccC
Confidence 4445667888899999999999999999998654 789999999999998 589999999999999999999995 89
Q ss_pred CCccccCc
Q 005128 702 HQHFLEGK 709 (713)
Q Consensus 702 ADi~~~~k 709 (713)
+++..+.+
T Consensus 119 ad~~~~d~ 126 (166)
T PHA02743 119 VNLGAINY 126 (166)
T ss_pred CCccCcCC
Confidence 99887653
No 21
>PHA02795 ankyrin-like protein; Provisional
Probab=99.11 E-value=2.3e-10 Score=127.74 Aligned_cols=83 Identities=20% Similarity=0.066 Sum_probs=77.6
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC--------CHHHHHH
Q 005128 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG--------SWEQLRV 696 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G--------~~eiV~l 696 (713)
..+++.|+.+|+++|..|..|+||||+|+..|+.+++++|+..|+++|.+|..|+||||+|+..| |.+++++
T Consensus 201 ~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvel 280 (437)
T PHA02795 201 LEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEI 280 (437)
T ss_pred HHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHH
Confidence 34678889999999999999999999999999999999999999999999999999999999998 4799999
Q ss_pred HHHcCCCcccc
Q 005128 697 RLRIQHQHFLE 707 (713)
Q Consensus 697 LL~~GADi~~~ 707 (713)
|+..|+++...
T Consensus 281 LL~~gadI~~~ 291 (437)
T PHA02795 281 LLREPLSIDCI 291 (437)
T ss_pred HHhCCCCCCch
Confidence 99999998753
No 22
>PHA02946 ankyin-like protein; Provisional
Probab=99.10 E-value=2.5e-10 Score=128.42 Aligned_cols=82 Identities=22% Similarity=0.299 Sum_probs=73.7
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC--HHHHHHHHHcCC
Q 005128 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGS--WEQLRVRLRIQH 702 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~--~eiV~lLL~~GA 702 (713)
..+++.|++.|+++|..|..|+||||+||..|+.+++++|+.+|+++|.+|..|+||||+|+..++ .+++++|+.+||
T Consensus 52 ~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Ga 131 (446)
T PHA02946 52 ERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGA 131 (446)
T ss_pred HHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 346778888999999999999999999999999999999999999999999999999999988664 788999999999
Q ss_pred Cccc
Q 005128 703 QHFL 706 (713)
Q Consensus 703 Di~~ 706 (713)
++..
T Consensus 132 din~ 135 (446)
T PHA02946 132 KINN 135 (446)
T ss_pred Cccc
Confidence 9874
No 23
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.09 E-value=1.6e-10 Score=103.04 Aligned_cols=76 Identities=24% Similarity=0.265 Sum_probs=68.5
Q ss_pred HhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccC
Q 005128 632 HEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEG 708 (713)
Q Consensus 632 le~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~ 708 (713)
...|.++|.. ..|++|||+||-.|...++++|+.-|++++.+|+.|-|||.-|...||.+||++||..||+-++++
T Consensus 22 v~~g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~ 97 (117)
T KOG4214|consen 22 VNEGLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHA 97 (117)
T ss_pred HHccccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeC
Confidence 3345666643 389999999999999999999999999999999999999999999999999999999999988754
No 24
>PHA02741 hypothetical protein; Provisional
Probab=99.07 E-value=6.4e-10 Score=108.70 Aligned_cols=73 Identities=23% Similarity=0.187 Sum_probs=40.7
Q ss_pred CCCCCcccCCCCcHHHHHHHhCC----HHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcCCHHHHHHHHH-cCCCcccc
Q 005128 635 GKGPNVIDDGGQGVVHLAAALGY----EWAMRPIIATGVSPNFRDA-RGRTALHWASYFGSWEQLRVRLR-IQHQHFLE 707 (713)
Q Consensus 635 Gad~N~~D~~G~TpLHlAA~lG~----~~~V~lLL~~GadvN~rD~-~G~TPLH~Aa~~G~~eiV~lLL~-~GADi~~~ 707 (713)
|++++.+|..|+||||+||..|+ ..++++|+..|+++|.+|. .|+||||+|+..|+.+++++|+. .|+++.++
T Consensus 50 ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~ 128 (169)
T PHA02741 50 AAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFC 128 (169)
T ss_pred hhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcC
Confidence 34455555555555555555555 2455555555555555553 55555555555555555555554 35555543
No 25
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.06 E-value=4.8e-10 Score=126.23 Aligned_cols=96 Identities=18% Similarity=0.179 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc-CCH
Q 005128 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF-GSW 691 (713)
Q Consensus 613 ~LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~-G~~ 691 (713)
..|+.+.... ...+++.|++.|++++..|..|.||||+|+..|+..++++|+..|++++.+|..|+||||+|+.. ++.
T Consensus 170 tpLh~A~~~~-~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~ 248 (477)
T PHA02878 170 TALHYATENK-DQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDY 248 (477)
T ss_pred CHHHHHHhCC-CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCH
Confidence 3455455444 34567888888999999999999999999999999999999999999999999999999999875 688
Q ss_pred HHHHHHHHcCCCccccCc
Q 005128 692 EQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 692 eiV~lLL~~GADi~~~~k 709 (713)
+++++|+.+|+++..+..
T Consensus 249 ~iv~~Ll~~gadvn~~~~ 266 (477)
T PHA02878 249 DILKLLLEHGVDVNAKSY 266 (477)
T ss_pred HHHHHHHHcCCCCCccCC
Confidence 999999999999887653
No 26
>PHA03095 ankyrin-like protein; Provisional
Probab=99.06 E-value=4.6e-10 Score=124.96 Aligned_cols=81 Identities=25% Similarity=0.185 Sum_probs=65.2
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.++..+++.|+++|..|..|+||||+|+..|+..++++|+..|++++.+|..|+||||+|+..|+.+++++|+..++++.
T Consensus 238 ~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~ 317 (471)
T PHA03095 238 SLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAE 317 (471)
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHH
Confidence 35566777788888888888888888888888888888888888888888888888888888888888888888887764
Q ss_pred c
Q 005128 706 L 706 (713)
Q Consensus 706 ~ 706 (713)
.
T Consensus 318 ~ 318 (471)
T PHA03095 318 T 318 (471)
T ss_pred H
Confidence 3
No 27
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.05 E-value=8.1e-10 Score=111.94 Aligned_cols=85 Identities=14% Similarity=0.092 Sum_probs=75.0
Q ss_pred HHHHHHHHhCCCCCCccc-CCCCcHHHHHHHh---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH--cCCHHHHHHHH
Q 005128 625 EWLVWKIHEGGKGPNVID-DGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFRDARGRTALHWASY--FGSWEQLRVRL 698 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D-~~G~TpLHlAA~l---G~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~--~G~~eiV~lLL 698 (713)
.-+++.|++.|+++|.++ ..|+||||+|+.. ++.+++++|+++|+++|.+|..|.||||+|+. .++.+++++|+
T Consensus 66 ~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li 145 (209)
T PHA02859 66 VEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLI 145 (209)
T ss_pred HHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHH
Confidence 346788889999999987 5899999998864 47899999999999999999999999999876 47899999999
Q ss_pred HcCCCccccCc
Q 005128 699 RIQHQHFLEGK 709 (713)
Q Consensus 699 ~~GADi~~~~k 709 (713)
..|+++..+++
T Consensus 146 ~~gadin~~d~ 156 (209)
T PHA02859 146 DSGVSFLNKDF 156 (209)
T ss_pred HcCCCcccccC
Confidence 99999987653
No 28
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.04 E-value=2e-10 Score=126.12 Aligned_cols=82 Identities=22% Similarity=0.292 Sum_probs=78.0
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
++..|++.|+|++..+..|.|.||+||..|+.+++++|++.|+|+|.++..|.||||.++-.|+.+++++|+.+|+.+.+
T Consensus 132 ivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~ 211 (615)
T KOG0508|consen 132 IVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV 211 (615)
T ss_pred HHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeee
Confidence 67788899999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred cC
Q 005128 707 EG 708 (713)
Q Consensus 707 ~~ 708 (713)
-+
T Consensus 212 d~ 213 (615)
T KOG0508|consen 212 DG 213 (615)
T ss_pred cC
Confidence 43
No 29
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=99.04 E-value=1.6e-09 Score=95.14 Aligned_cols=83 Identities=20% Similarity=0.315 Sum_probs=70.1
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCCC-CCceeEEEEEeCCcccc
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNRLAC 518 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PPh-~pG~V~l~Vt~~n~~~c 518 (713)
.|+.|+|..|+..|||+|+|.|.+|.. .....|+||+.+.....+.+..|.|.+|++ .+|.|+|.|..++...
T Consensus 2 ~I~~i~P~~Gp~~GGT~vtI~G~~~~~-----~~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~~~~- 75 (85)
T cd01179 2 SITSLSPSYGPQSGGTRLTITGKHLNA-----GSSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDGARR- 75 (85)
T ss_pred eeeEEcCCCCCCCCCEEEEEEEECCCC-----CCeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECCccc-
Confidence 699999999999999999999999965 234899999998777778899999999995 4789999999988733
Q ss_pred ccceeeeecC
Q 005128 519 SEVREFEYRE 528 (713)
Q Consensus 519 Sev~eFEYr~ 528 (713)
+....|+|.+
T Consensus 76 ~~~~~F~Y~~ 85 (85)
T cd01179 76 LAPLVFTYTE 85 (85)
T ss_pred CCCccEEEeC
Confidence 3356799864
No 30
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=99.02 E-value=2e-09 Score=93.42 Aligned_cols=83 Identities=24% Similarity=0.339 Sum_probs=69.8
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEe-CCeecceEeeecceeeeecCCCCC---ceeEEEEEeCCc
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMF-GEIEVPAEVLTDNVIRCQAPSHAA---GRVPFYITGSNR 515 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmF-Gd~eVpaei~q~GVLrC~~PPh~p---G~V~l~Vt~~n~ 515 (713)
.|+.|+|.+|+..|||+|+|.|.+|... ..+.|+| |+.......+.+..|.|.+|++.. |.|.|+|...+.
T Consensus 2 ~I~~i~P~~g~~~GGt~itI~G~~f~~~-----~~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (89)
T cd00102 2 VITSISPSSGPVSGGTEVTITGSNFGSG-----SNLRVTFGGGVPCSVLSVSSTAIVCTTPPYANPGPGPVEVTVDRGNG 76 (89)
T ss_pred EEeEEECCcCCCCCCeEEEEEEECCCCC-----CcEEEEEeCCCeEEEEEecCCEEEEECCCCCCCCcEEEEEEEeCCCC
Confidence 6999999999999999999999999652 2689999 998877777899999999999444 888888877664
Q ss_pred cccccceeeeec
Q 005128 516 LACSEVREFEYR 527 (713)
Q Consensus 516 ~~cSev~eFEYr 527 (713)
...+....|+|.
T Consensus 77 ~~~~~~~~F~Y~ 88 (89)
T cd00102 77 GITSSPLTFTYV 88 (89)
T ss_pred cccCCCccEEee
Confidence 456777889985
No 31
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.01 E-value=1.3e-09 Score=122.86 Aligned_cols=93 Identities=18% Similarity=0.202 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHh-CCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcCCH
Q 005128 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAAL-GYEWAMRPIIATGVSPNFRDA-RGRTALHWASYFGSW 691 (713)
Q Consensus 614 LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~l-G~~~~V~lLL~~GadvN~rD~-~G~TPLH~Aa~~G~~ 691 (713)
.|+.+.... ..-+++.|++.|++++..|..|+||||+|+.. ++..++++|+..|+++|.++. .|+||||+| .++.
T Consensus 204 pLh~A~~~~-~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~ 280 (477)
T PHA02878 204 PLHHAVKHY-NKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSE 280 (477)
T ss_pred HHHHHHHhC-CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCH
Confidence 344444333 23467788888999999999999999998875 678899999999999998875 799999998 5778
Q ss_pred HHHHHHHHcCCCccccCc
Q 005128 692 EQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 692 eiV~lLL~~GADi~~~~k 709 (713)
+++++|+..|||+.++++
T Consensus 281 ~~v~~Ll~~gadin~~d~ 298 (477)
T PHA02878 281 RKLKLLLEYGADINSLNS 298 (477)
T ss_pred HHHHHHHHCCCCCCCcCC
Confidence 899999999999887654
No 32
>PHA02791 ankyrin-like protein; Provisional
Probab=99.01 E-value=1.1e-09 Score=116.64 Aligned_cols=84 Identities=13% Similarity=-0.056 Sum_probs=73.3
Q ss_pred HHHHHHHHhCCCCCCcccCCC-CcHHHHHHHhCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 005128 625 EWLVWKIHEGGKGPNVIDDGG-QGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWASYFGSWEQLRVRLRIQH 702 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G-~TpLHlAA~lG~~~~V~lLL~~GadvN~rD-~~G~TPLH~Aa~~G~~eiV~lLL~~GA 702 (713)
.-+++.|++.|++++..+..| .||||+||..|+.+++++|+..|.+. .| ..|+||||+|+..|+.++|++||.+||
T Consensus 107 ~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gA 184 (284)
T PHA02791 107 MQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMT 184 (284)
T ss_pred HHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCC
Confidence 347788899999999999888 58999999999999999999987654 23 358999999999999999999999999
Q ss_pred CccccCcc
Q 005128 703 QHFLEGKL 710 (713)
Q Consensus 703 Di~~~~kl 710 (713)
++..++++
T Consensus 185 d~n~~d~~ 192 (284)
T PHA02791 185 STNTNNSL 192 (284)
T ss_pred CCCcccCC
Confidence 99887653
No 33
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.01 E-value=5.1e-10 Score=116.71 Aligned_cols=96 Identities=19% Similarity=0.178 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 005128 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQ 693 (713)
Q Consensus 614 LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~ei 693 (713)
.|+-+.++. +..++++|+..|+.+|..+...-||||+||+.||..+|..|+...+|+|+.+.+|.|||||||+.|...+
T Consensus 37 plhwaakeg-h~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydqi 115 (448)
T KOG0195|consen 37 PLHWAAKEG-HVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQI 115 (448)
T ss_pred hhhhhhhcc-cHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHH
Confidence 355555655 5568899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCccccCcc
Q 005128 694 LRVRLRIQHQHFLEGKL 710 (713)
Q Consensus 694 V~lLL~~GADi~~~~kl 710 (713)
+.-|+.+||.+.+-.|+
T Consensus 116 aedli~~ga~v~icnk~ 132 (448)
T KOG0195|consen 116 AEDLISCGAAVNICNKK 132 (448)
T ss_pred HHHHHhccceeeecccC
Confidence 99999999998876654
No 34
>PHA03095 ankyrin-like protein; Provisional
Probab=99.00 E-value=1.3e-09 Score=121.45 Aligned_cols=98 Identities=20% Similarity=0.132 Sum_probs=83.3
Q ss_pred HHHHHHHHHH--HHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhC-CHHHHHHHHHcCCCCcccCCCCCcHHHHHH--H
Q 005128 613 KLIQNLLRNR--LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG-YEWAMRPIIATGVSPNFRDARGRTALHWAS--Y 687 (713)
Q Consensus 613 ~LLq~lLk~k--l~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG-~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa--~ 687 (713)
..|+.++... -...+++.|++.|+++|..|..|.||||+|+..| ...++++|+..|++++.+|..|+||||+|+ .
T Consensus 49 t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~ 128 (471)
T PHA03095 49 TPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGF 128 (471)
T ss_pred CHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCC
Confidence 3455454433 2345778889999999999999999999999999 599999999999999999999999999999 5
Q ss_pred cCCHHHHHHHHHcCCCccccCcc
Q 005128 688 FGSWEQLRVRLRIQHQHFLEGKL 710 (713)
Q Consensus 688 ~G~~eiV~lLL~~GADi~~~~kl 710 (713)
.++.+++++|+.+|+++..+++.
T Consensus 129 ~~~~~iv~~Ll~~gad~~~~d~~ 151 (471)
T PHA03095 129 NINPKVIRLLLRKGADVNALDLY 151 (471)
T ss_pred cCCHHHHHHHHHcCCCCCccCCC
Confidence 67899999999999999876653
No 35
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.99 E-value=1.6e-09 Score=120.58 Aligned_cols=96 Identities=18% Similarity=0.283 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005128 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWE 692 (713)
Q Consensus 613 ~LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~e 692 (713)
..|+.++... ..-+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+
T Consensus 126 T~Lh~A~~~~-~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~ 204 (434)
T PHA02874 126 TFLHYAIKKG-DLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYA 204 (434)
T ss_pred cHHHHHHHCC-CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 3444444443 233667788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccccCc
Q 005128 693 QLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 693 iV~lLL~~GADi~~~~k 709 (713)
++++|+..|+++..+.+
T Consensus 205 iv~~Ll~~g~~i~~~~~ 221 (434)
T PHA02874 205 CIKLLIDHGNHIMNKCK 221 (434)
T ss_pred HHHHHHhCCCCCcCCCC
Confidence 99999999999876654
No 36
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.99 E-value=2e-09 Score=119.78 Aligned_cols=64 Identities=27% Similarity=0.265 Sum_probs=32.2
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGS 690 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~ 690 (713)
+++.|++.|++++..|..|.||||+|+..|+..++++|+..|++++.++..|+||||+|+..++
T Consensus 172 iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~ 235 (434)
T PHA02874 172 IIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR 235 (434)
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh
Confidence 3444444455555455555555555555555555555555555555555555555555554443
No 37
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.97 E-value=2e-09 Score=129.43 Aligned_cols=86 Identities=23% Similarity=0.301 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005128 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWE 692 (713)
Q Consensus 613 ~LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~e 692 (713)
.++..+.... .-+++.+++.|+++|..|..|+||||+||..|+.+++++|+.+|+++|.+|.+|+||||+|+..||.+
T Consensus 528 ~L~~Aa~~g~--~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~ 605 (823)
T PLN03192 528 NLLTVASTGN--AALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHK 605 (823)
T ss_pred HHHHHHHcCC--HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHH
Confidence 3444444333 34678889999999999999999999999999999999999999999999999999999877777766
Q ss_pred HHHHHHHc
Q 005128 693 QLRVRLRI 700 (713)
Q Consensus 693 iV~lLL~~ 700 (713)
++++|+..
T Consensus 606 iv~~L~~~ 613 (823)
T PLN03192 606 IFRILYHF 613 (823)
T ss_pred HHHHHHhc
Confidence 65555443
No 38
>PHA02798 ankyrin-like protein; Provisional
Probab=98.97 E-value=1.5e-09 Score=122.90 Aligned_cols=83 Identities=17% Similarity=0.058 Sum_probs=77.2
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHhC---CHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC---HHHHHHHH
Q 005128 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG---YEWAMRPIIATGVSPNFRDARGRTALHWASYFGS---WEQLRVRL 698 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG---~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~---~eiV~lLL 698 (713)
.-+++.|++.|+++|..|..|+||||+|+..| ..+++++|+..|++++.+|..|+||||+|+..|+ .+++++|+
T Consensus 89 ~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll 168 (489)
T PHA02798 89 LDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLL 168 (489)
T ss_pred HHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHH
Confidence 45778889999999999999999999999986 6789999999999999999999999999999998 99999999
Q ss_pred HcCCCcccc
Q 005128 699 RIQHQHFLE 707 (713)
Q Consensus 699 ~~GADi~~~ 707 (713)
..|+++..+
T Consensus 169 ~~gadin~~ 177 (489)
T PHA02798 169 EKGVDINTH 177 (489)
T ss_pred HhCCCcccc
Confidence 999998765
No 39
>PHA02798 ankyrin-like protein; Provisional
Probab=98.97 E-value=1.4e-09 Score=123.09 Aligned_cols=86 Identities=17% Similarity=0.062 Sum_probs=77.5
Q ss_pred HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHh-----CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC---CHHHHH
Q 005128 624 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAAL-----GYEWAMRPIIATGVSPNFRDARGRTALHWASYFG---SWEQLR 695 (713)
Q Consensus 624 ~ewLvekLle~Gad~N~~D~~G~TpLHlAA~l-----G~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G---~~eiV~ 695 (713)
...+++.|++.|+++|..|..|.||||.|+.. +..+++++|+++|+++|.+|..|+||||+|+..| +.++++
T Consensus 50 ~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~ 129 (489)
T PHA02798 50 STDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILL 129 (489)
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHH
Confidence 34577888899999999999999999998764 6689999999999999999999999999999975 789999
Q ss_pred HHHHcCCCccccCc
Q 005128 696 VRLRIQHQHFLEGK 709 (713)
Q Consensus 696 lLL~~GADi~~~~k 709 (713)
+|+++||++..+++
T Consensus 130 ~Ll~~Gadvn~~d~ 143 (489)
T PHA02798 130 FMIENGADTTLLDK 143 (489)
T ss_pred HHHHcCCCccccCC
Confidence 99999999987654
No 40
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.96 E-value=1.6e-09 Score=121.03 Aligned_cols=83 Identities=20% Similarity=0.098 Sum_probs=78.6
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
..+++.|++.|+++|..|..|.||||+|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.+++++|+.+|+++
T Consensus 230 ~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i 309 (480)
T PHA03100 230 LEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSI 309 (480)
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCH
Confidence 45778889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccc
Q 005128 705 FLE 707 (713)
Q Consensus 705 ~~~ 707 (713)
...
T Consensus 310 ~~i 312 (480)
T PHA03100 310 KTI 312 (480)
T ss_pred HHH
Confidence 753
No 41
>PHA02730 ankyrin-like protein; Provisional
Probab=98.95 E-value=1.9e-09 Score=125.64 Aligned_cols=78 Identities=17% Similarity=0.043 Sum_probs=67.8
Q ss_pred HHHHhCCCCCC-cccCCCCcHHHHHHHhC---CHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC--CHHHHHHHHHcCC
Q 005128 629 WKIHEGGKGPN-VIDDGGQGVVHLAAALG---YEWAMRPIIATGVSPNFRDARGRTALHWASYFG--SWEQLRVRLRIQH 702 (713)
Q Consensus 629 ekLle~Gad~N-~~D~~G~TpLHlAA~lG---~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G--~~eiV~lLL~~GA 702 (713)
..+++..+++| ..|..|+||||+|+..| +.+++++|+++||+++.+|..|+||||+|+..| +.++|++|+.+|+
T Consensus 24 ~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~ 103 (672)
T PHA02730 24 KLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYS 103 (672)
T ss_pred HHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCC
Confidence 34455556787 78899999999999997 489999999999999999999999999999966 7999999999988
Q ss_pred Cccc
Q 005128 703 QHFL 706 (713)
Q Consensus 703 Di~~ 706 (713)
++..
T Consensus 104 ~~~~ 107 (672)
T PHA02730 104 NASN 107 (672)
T ss_pred CCCc
Confidence 6643
No 42
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.93 E-value=3.8e-09 Score=127.07 Aligned_cols=96 Identities=16% Similarity=0.083 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCC-------------------------------HHHH
Q 005128 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY-------------------------------EWAM 661 (713)
Q Consensus 613 ~LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~-------------------------------~~~V 661 (713)
..|+.+.... +..+++.|++.|+++|..|.+|.||||+|+..|+ ..++
T Consensus 560 TpLh~Aa~~g-~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v 638 (823)
T PLN03192 560 TPLHIAASKG-YEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAM 638 (823)
T ss_pred CHHHHHHHcC-hHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHH
Confidence 3455555444 4567788999999999999999999986665555 4556
Q ss_pred HHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 662 RPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 662 ~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
+.|+++|+++|.+|.+|+||||+|+..|+.++|++|+.+||++...++
T Consensus 639 ~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~ 686 (823)
T PLN03192 639 KELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANT 686 (823)
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCC
Confidence 668889999999999999999999999999999999999999987654
No 43
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.93 E-value=2e-09 Score=130.27 Aligned_cols=82 Identities=20% Similarity=0.174 Sum_probs=73.2
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
-.+..+++.|++++.++..|.||||+||..|+..+|++|+++|++++.+|+.|+||||.||..|+.+|+.+|+++||+++
T Consensus 521 ~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vn 600 (1143)
T KOG4177|consen 521 KVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVN 600 (1143)
T ss_pred HHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCC
Confidence 35566778899999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred cc
Q 005128 706 LE 707 (713)
Q Consensus 706 ~~ 707 (713)
..
T Consensus 601 a~ 602 (1143)
T KOG4177|consen 601 AA 602 (1143)
T ss_pred cc
Confidence 64
No 44
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.92 E-value=3.8e-09 Score=124.38 Aligned_cols=81 Identities=26% Similarity=0.297 Sum_probs=75.9
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHc-----
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRI----- 700 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~----- 700 (713)
..++.|++.|+++|..|..|.||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.+++++|+.+
T Consensus 96 ~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~ 175 (664)
T PTZ00322 96 VGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHF 175 (664)
T ss_pred HHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCccc
Confidence 357888999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred --CCCccc
Q 005128 701 --QHQHFL 706 (713)
Q Consensus 701 --GADi~~ 706 (713)
|++...
T Consensus 176 ~~ga~~~~ 183 (664)
T PTZ00322 176 ELGANAKP 183 (664)
T ss_pred ccCCCCCc
Confidence 666654
No 45
>PHA02741 hypothetical protein; Provisional
Probab=98.92 E-value=3.4e-09 Score=103.55 Aligned_cols=78 Identities=17% Similarity=0.128 Sum_probs=71.7
Q ss_pred HHHHHHHhCCCCCCcccC-CCCcHHHHHHHhCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 626 WLVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIA-TGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~-~G~TpLHlAA~lG~~~~V~lLL~-~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
-+++.|+..|+++|..+. .|.||||+|+..++.+++++|+. .|++++.+|..|+||||+|+..|+.+++++|+..++.
T Consensus 78 ~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 78 EIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred HHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 356777889999999885 89999999999999999999997 5999999999999999999999999999999988754
No 46
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.91 E-value=4.6e-09 Score=117.43 Aligned_cols=94 Identities=21% Similarity=0.199 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCcccCCC------CcHHHHHHHhCC--HHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 005128 615 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGG------QGVVHLAAALGY--EWAMRPIIATGVSPNFRDARGRTALHWAS 686 (713)
Q Consensus 615 Lq~lLk~kl~ewLvekLle~Gad~N~~D~~G------~TpLHlAA~lG~--~~~V~lLL~~GadvN~rD~~G~TPLH~Aa 686 (713)
|+.++... ...+++.|++.|++++..+..| .||||+|+..|+ ..++++|+..|+++|.+|..|+||||+|+
T Consensus 180 L~~A~~~~-~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~ 258 (480)
T PHA03100 180 LHIAVEKG-NIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAV 258 (480)
T ss_pred HHHHHHhC-CHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 33344333 3447788889999999999999 999999999999 99999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCccccCc
Q 005128 687 YFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 687 ~~G~~eiV~lLL~~GADi~~~~k 709 (713)
..|+.+++++|+..|||+..+++
T Consensus 259 ~~~~~~iv~~Ll~~gad~n~~d~ 281 (480)
T PHA03100 259 YNNNPEFVKYLLDLGANPNLVNK 281 (480)
T ss_pred HcCCHHHHHHHHHcCCCCCccCC
Confidence 99999999999999999987654
No 47
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.88 E-value=7e-09 Score=114.16 Aligned_cols=82 Identities=13% Similarity=0.072 Sum_probs=76.4
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARG-RTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G-~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++..+..| .||||+|+..|+.++|++|+.+|||+
T Consensus 149 ~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~ 228 (413)
T PHA02875 149 KGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADC 228 (413)
T ss_pred HHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCc
Confidence 46778889999999999999999999999999999999999999999999887 48999999999999999999999998
Q ss_pred ccc
Q 005128 705 FLE 707 (713)
Q Consensus 705 ~~~ 707 (713)
.+.
T Consensus 229 n~~ 231 (413)
T PHA02875 229 NIM 231 (413)
T ss_pred chH
Confidence 753
No 48
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.87 E-value=6.2e-09 Score=123.31 Aligned_cols=86 Identities=15% Similarity=0.067 Sum_probs=75.8
Q ss_pred HHHHHHHHHhCC-CCCCcc-cCCCCcHHHHHHHh--CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC--HHHHHHH
Q 005128 624 CEWLVWKIHEGG-KGPNVI-DDGGQGVVHLAAAL--GYEWAMRPIIATGVSPNFRDARGRTALHWASYFGS--WEQLRVR 697 (713)
Q Consensus 624 ~ewLvekLle~G-ad~N~~-D~~G~TpLHlAA~l--G~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~--~eiV~lL 697 (713)
..-+++.|++.| +++|.. |..|.||||+|+.. +..+++++|++.|+++|.+|..|+||||+|+..|+ .++|++|
T Consensus 154 ~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklL 233 (764)
T PHA02716 154 DLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKI 233 (764)
T ss_pred CHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHH
Confidence 345778888899 999988 89999999988654 56789999999999999999999999999999995 5899999
Q ss_pred HHcCCCccccCc
Q 005128 698 LRIQHQHFLEGK 709 (713)
Q Consensus 698 L~~GADi~~~~k 709 (713)
+++||++..+++
T Consensus 234 Le~GADVN~kD~ 245 (764)
T PHA02716 234 IELGGDMDMKCV 245 (764)
T ss_pred HHcCCCCCCCCC
Confidence 999999988654
No 49
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.86 E-value=6e-09 Score=118.13 Aligned_cols=75 Identities=19% Similarity=0.135 Sum_probs=70.1
Q ss_pred HhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 632 HEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 632 le~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
+..|+++|.+|..|+||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|+.++|+.||+.+....+
T Consensus 243 l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~~~~ 317 (494)
T PHA02989 243 ILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPGKYL 317 (494)
T ss_pred HHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCChHH
Confidence 345799999999999999999999999999999999999999999999999999999999999999998876653
No 50
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.86 E-value=1.7e-09 Score=109.45 Aligned_cols=83 Identities=19% Similarity=0.161 Sum_probs=78.8
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
..++.|++.|+++....++..++|.+|+..||..+|++|+.+++|+|.-|-+|-|||-||++.||.+||+.||..|||++
T Consensus 174 ~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t 253 (296)
T KOG0502|consen 174 PVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVT 253 (296)
T ss_pred HHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcc
Confidence 46777888999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccC
Q 005128 706 LEG 708 (713)
Q Consensus 706 ~~~ 708 (713)
.++
T Consensus 254 ~e~ 256 (296)
T KOG0502|consen 254 QED 256 (296)
T ss_pred ccc
Confidence 765
No 51
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.83 E-value=1.2e-08 Score=115.76 Aligned_cols=80 Identities=15% Similarity=0.115 Sum_probs=53.0
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHh---CCHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHc--CCHHHHHHHHHc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAAL---GYEWAMRPIIATGVSP-NFRDARGRTALHWASYF--GSWEQLRVRLRI 700 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~l---G~~~~V~lLL~~Gadv-N~rD~~G~TPLH~Aa~~--G~~eiV~lLL~~ 700 (713)
+++.|++.|+++|..|..|.||||.|+.. |..+++++|+++|+++ +.+|..|+||||+|+.. ++.++|++|+++
T Consensus 90 iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~ 169 (494)
T PHA02989 90 IVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF 169 (494)
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc
Confidence 45566667777777777777777765543 4566777777777777 56677777777776542 466777777777
Q ss_pred CCCccc
Q 005128 701 QHQHFL 706 (713)
Q Consensus 701 GADi~~ 706 (713)
||++..
T Consensus 170 Gadi~~ 175 (494)
T PHA02989 170 GVNLFE 175 (494)
T ss_pred CCCccc
Confidence 776654
No 52
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.83 E-value=8.4e-09 Score=122.23 Aligned_cols=84 Identities=11% Similarity=0.014 Sum_probs=74.8
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCC--HHHHHHHHHcCCCCcccCCCCCcHHHHH------------------
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY--EWAMRPIIATGVSPNFRDARGRTALHWA------------------ 685 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~--~~~V~lLL~~GadvN~rD~~G~TPLH~A------------------ 685 (713)
.+++.|++.|+++|..|..|.||||+|+..|+ .+++++|++.|+++|.+|..|+||||+|
T Consensus 193 eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~ 272 (764)
T PHA02716 193 DILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIES 272 (764)
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHh
Confidence 47788899999999999999999999999995 4899999999999999999999999975
Q ss_pred -------------------HHcCCHHHHHHHHHcCCCccccCc
Q 005128 686 -------------------SYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 686 -------------------a~~G~~eiV~lLL~~GADi~~~~k 709 (713)
+..|+.++|++|++.||++..+++
T Consensus 273 ~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~ 315 (764)
T PHA02716 273 LDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDS 315 (764)
T ss_pred ccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCC
Confidence 345788899999999999887653
No 53
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.83 E-value=1.5e-08 Score=98.21 Aligned_cols=81 Identities=26% Similarity=0.352 Sum_probs=74.1
Q ss_pred HHHHhCCCCCCcccCCCCcHHHHHHHhCC-----HHHHHHHHHcCC---CCcccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 005128 629 WKIHEGGKGPNVIDDGGQGVVHLAAALGY-----EWAMRPIIATGV---SPNFRDARGRTALHWASYFGSWEQLRVRLRI 700 (713)
Q Consensus 629 ekLle~Gad~N~~D~~G~TpLHlAA~lG~-----~~~V~lLL~~Ga---dvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~ 700 (713)
..++..|++++..+..|.|+||+|+..|+ ..+++.|+..|+ ..+.+|..|+||||||+..|+.+++++|+..
T Consensus 90 ~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~ 169 (235)
T COG0666 90 KLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEA 169 (235)
T ss_pred HHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhc
Confidence 56778899999999999999999999999 999999999999 5566799999999999999999999999999
Q ss_pred CCCccccCc
Q 005128 701 QHQHFLEGK 709 (713)
Q Consensus 701 GADi~~~~k 709 (713)
|+++..+..
T Consensus 170 ~~~~~~~~~ 178 (235)
T COG0666 170 GADPNSRNS 178 (235)
T ss_pred CCCCccccc
Confidence 999887643
No 54
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.82 E-value=5.1e-09 Score=121.16 Aligned_cols=84 Identities=23% Similarity=0.210 Sum_probs=73.8
Q ss_pred HHHHHHh--CCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCc---ccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 005128 627 LVWKIHE--GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPN---FRDARGRTALHWASYFGSWEQLRVRLRIQ 701 (713)
Q Consensus 627 LvekLle--~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN---~rD~~G~TPLH~Aa~~G~~eiV~lLL~~G 701 (713)
.+++|++ .-...|..|..|+||||+|+..||..++++|+..|+..+ .+|..|.||||+|+.+|+..+|+.|+.+|
T Consensus 321 tv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~G 400 (929)
T KOG0510|consen 321 TVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHG 400 (929)
T ss_pred HHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcC
Confidence 3555665 334567889999999999999999999999999999887 46999999999999999999999999999
Q ss_pred CCccccCcc
Q 005128 702 HQHFLEGKL 710 (713)
Q Consensus 702 ADi~~~~kl 710 (713)
|++..++|.
T Consensus 401 a~I~~~n~~ 409 (929)
T KOG0510|consen 401 ADIGVKNKK 409 (929)
T ss_pred Cceeecccc
Confidence 999876653
No 55
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.81 E-value=1.1e-08 Score=107.05 Aligned_cols=96 Identities=20% Similarity=0.180 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHHc
Q 005128 610 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNF-RDARGRTALHWASYF 688 (713)
Q Consensus 610 ~~d~LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~-rD~~G~TPLH~Aa~~ 688 (713)
....||+.+-|+.....+ .|+..-.++|.+|..|+++|..||..|...++++|++.|+|||. ++..++||||+||..
T Consensus 12 ~~~~Lle~i~Kndt~~a~--~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALS 89 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAAL--ALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALS 89 (396)
T ss_pred hhhHHHHHHccCcHHHHH--HHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHc
Confidence 345566655555443322 22333346889999999999999999999999999999999998 778899999999999
Q ss_pred CCHHHHHHHHHcCCCcccc
Q 005128 689 GSWEQLRVRLRIQHQHFLE 707 (713)
Q Consensus 689 G~~eiV~lLL~~GADi~~~ 707 (713)
|+.++.++|+.+||...+.
T Consensus 90 Gn~dvcrllldaGa~~~~v 108 (396)
T KOG1710|consen 90 GNQDVCRLLLDAGARMYLV 108 (396)
T ss_pred CCchHHHHHHhccCccccc
Confidence 9999999999999998764
No 56
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.80 E-value=7.7e-09 Score=111.00 Aligned_cols=81 Identities=26% Similarity=0.309 Sum_probs=67.0
Q ss_pred HHHHHHHHhCCCCCCcc-cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHc-CC
Q 005128 625 EWLVWKIHEGGKGPNVI-DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRI-QH 702 (713)
Q Consensus 625 ewLvekLle~Gad~N~~-D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~-GA 702 (713)
...+++|.+.| ++|.+ ...|||+|++|...|...+|+.||.+|+|||.+|.+|.|||++||-+||.++|++||.. ++
T Consensus 320 ~~vV~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~c 398 (452)
T KOG0514|consen 320 RTVVERLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSC 398 (452)
T ss_pred HHHHHHHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcc
Confidence 34555655544 67755 46699999999999999999999999999999999999999999999999999999853 45
Q ss_pred Cccc
Q 005128 703 QHFL 706 (713)
Q Consensus 703 Di~~ 706 (713)
|+.+
T Consensus 399 d~sL 402 (452)
T KOG0514|consen 399 DISL 402 (452)
T ss_pred ccee
Confidence 5554
No 57
>PHA02946 ankyin-like protein; Provisional
Probab=98.77 E-value=2.6e-08 Score=112.24 Aligned_cols=81 Identities=16% Similarity=0.090 Sum_probs=43.5
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCC--HHHHHHHHHcCCCCcc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGY--EWAMRPIIATGVSPNF-RDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~--~~~V~lLL~~GadvN~-rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
+++.|++.|+++|.+|..|+||||+|+..+. .+++++|+..|+++|. .|..|.|||| ||..|+.+++++|+..|++
T Consensus 87 iv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad 165 (446)
T PHA02946 87 IVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFE 165 (446)
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhcccc
Confidence 4445555566666556666666665555442 4455555555555553 4555555554 4444555555555555555
Q ss_pred ccccC
Q 005128 704 HFLEG 708 (713)
Q Consensus 704 i~~~~ 708 (713)
+..++
T Consensus 166 ~~~~d 170 (446)
T PHA02946 166 ARIVD 170 (446)
T ss_pred ccccC
Confidence 54443
No 58
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.77 E-value=2.5e-08 Score=117.34 Aligned_cols=82 Identities=16% Similarity=0.089 Sum_probs=76.1
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
..+++.|++.|+++|..|..|.||||+||..|+.++|++|+..|++++.++..|.||||+|+..|+.++++.|+..++++
T Consensus 158 ~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~ 237 (682)
T PHA02876 158 LLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNI 237 (682)
T ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC
Confidence 45778889999999999999999999999999999999999999999999999999999999999999999998887765
Q ss_pred cc
Q 005128 705 FL 706 (713)
Q Consensus 705 ~~ 706 (713)
..
T Consensus 238 ~~ 239 (682)
T PHA02876 238 NK 239 (682)
T ss_pred CC
Confidence 43
No 59
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.75 E-value=1e-08 Score=114.56 Aligned_cols=77 Identities=25% Similarity=0.299 Sum_probs=72.6
Q ss_pred hCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 633 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 633 e~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
..|......+..|.|.||.|+++||..+.++|+.+|.+++.+|.+||||||.||+.|+++++++|+.+|+++..++|
T Consensus 186 ~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~ 262 (527)
T KOG0505|consen 186 NAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTK 262 (527)
T ss_pred hccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhh
Confidence 36788888888899999999999999999999999999999999999999999999999999999999999998765
No 60
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.75 E-value=7.8e-09 Score=98.93 Aligned_cols=70 Identities=17% Similarity=0.147 Sum_probs=62.9
Q ss_pred cccCCCCcHHHHHHHhCCHH---HHHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHH-cCCCccccCc
Q 005128 640 VIDDGGQGVVHLAAALGYEW---AMRPIIATGVSPNFRD-ARGRTALHWASYFGSWEQLRVRLR-IQHQHFLEGK 709 (713)
Q Consensus 640 ~~D~~G~TpLHlAA~lG~~~---~V~lLL~~GadvN~rD-~~G~TPLH~Aa~~G~~eiV~lLL~-~GADi~~~~k 709 (713)
..|..|+||||+||..|... ++++|+..|+++|.+| ..|+||||+|+..|+.+++++|+. .|+++..+++
T Consensus 50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~ 124 (154)
T PHA02736 50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNY 124 (154)
T ss_pred HhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccC
Confidence 46899999999999999874 5789999999999998 599999999999999999999997 5999887654
No 61
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.73 E-value=1.2e-08 Score=114.06 Aligned_cols=80 Identities=21% Similarity=0.246 Sum_probs=76.1
Q ss_pred HHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 005128 628 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLE 707 (713)
Q Consensus 628 vekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~ 707 (713)
++.++..|++++..+.+|.|+||-||.-.+..+|++|++.|++||.+|..||||||-|+.+||..++..|+.+||++...
T Consensus 56 v~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~av 135 (527)
T KOG0505|consen 56 VRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAV 135 (527)
T ss_pred HHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhc
Confidence 56778889999999999999999999999999999999999999999999999999999999999999999999998754
No 62
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.73 E-value=8.1e-08 Score=84.31 Aligned_cols=84 Identities=21% Similarity=0.332 Sum_probs=64.3
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCC-CCC--ceeEEEEEeCCc-
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAA--GRVPFYITGSNR- 515 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~p--G~V~l~Vt~~n~- 515 (713)
.|+.|+|..|+..|||.|+|.|.+|.... ....|.||+.+.....+.+..|.|.+|+ ..+ +.|.|.|...+.
T Consensus 2 ~I~~i~P~~g~~~Ggt~vtI~G~~f~~~~----~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~~ 77 (90)
T cd00603 2 VITSISPSSGPLSGGTRLTITGSNLGSGS----PRVRVTVGGVPCKVLNVSSTEIVCRTPAAATPGEGPVEVTVDGANVS 77 (90)
T ss_pred eEEEEcCCCCCCCCCeEEEEEEECCCCCC----ceEEEEECCEECcEEecCCCEEEEECCCCCCCCcEeEEEEECCcccc
Confidence 69999999999999999999999996532 4789999999777777789999999999 554 445555443332
Q ss_pred cccccceeeeec
Q 005128 516 LACSEVREFEYR 527 (713)
Q Consensus 516 ~~cSev~eFEYr 527 (713)
...+....|+|.
T Consensus 78 ~~~~~~~~F~Y~ 89 (90)
T cd00603 78 ARVLSNTTFTYV 89 (90)
T ss_pred ccccCCcceEEe
Confidence 123455668875
No 63
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.73 E-value=3.9e-08 Score=115.69 Aligned_cols=84 Identities=18% Similarity=0.116 Sum_probs=66.9
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGS-WEQLRVRLRIQHQH 704 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~-~eiV~lLL~~GADi 704 (713)
.++..+++.|+++|.+|..|+||||+||..|+.+++++|+..|++++..+..|.||||+|+..++ ..++++|+..|+++
T Consensus 356 ~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadi 435 (682)
T PHA02876 356 DIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANV 435 (682)
T ss_pred HHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 45566777888888888888888888888888888888888888888888888888888877655 55678888888888
Q ss_pred cccCc
Q 005128 705 FLEGK 709 (713)
Q Consensus 705 ~~~~k 709 (713)
..+++
T Consensus 436 n~~d~ 440 (682)
T PHA02876 436 NSKNK 440 (682)
T ss_pred CcCCC
Confidence 77654
No 64
>PHA02917 ankyrin-like protein; Provisional
Probab=98.70 E-value=3.7e-08 Score=116.00 Aligned_cols=85 Identities=18% Similarity=0.066 Sum_probs=73.9
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHH--HhCCHHHHHHHHHcCCCCcccCC---CC-----------CcHHHHHHH-
Q 005128 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAA--ALGYEWAMRPIIATGVSPNFRDA---RG-----------RTALHWASY- 687 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G~TpLHlAA--~lG~~~~V~lLL~~GadvN~rD~---~G-----------~TPLH~Aa~- 687 (713)
.-+++.|++.|+++|..|..|+||||.|+ ..|+.+++++|+.+|+++|.+|. .| .||||+|+.
T Consensus 116 ~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~ 195 (661)
T PHA02917 116 VDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIIS 195 (661)
T ss_pred HHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhh
Confidence 45788899999999999999999999654 47899999999999999987654 34 599999986
Q ss_pred ----------cCCHHHHHHHHHcCCCccccCc
Q 005128 688 ----------FGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 688 ----------~G~~eiV~lLL~~GADi~~~~k 709 (713)
.|+.++|++|+.+|||+..+++
T Consensus 196 ~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~ 227 (661)
T PHA02917 196 HLYSESDTRAYVRPEVVKCLINHGIKPSSIDK 227 (661)
T ss_pred cccccccccccCcHHHHHHHHHCCCCcccCCC
Confidence 5689999999999999998764
No 65
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.69 E-value=2.5e-08 Score=121.02 Aligned_cols=79 Identities=27% Similarity=0.207 Sum_probs=76.5
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
.-+|+.|++.|++++.+|+.|+||||.||..|+..++.+|+++|+++|..|.+|.||||.|++.|+.+++++|+..+++
T Consensus 553 v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 553 VDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred chHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence 4588999999999999999999999999999999999999999999999999999999999999999999999999988
No 66
>PHA02730 ankyrin-like protein; Provisional
Probab=98.68 E-value=4.3e-08 Score=114.56 Aligned_cols=80 Identities=15% Similarity=0.066 Sum_probs=74.6
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHH--cCCHHHHHHHHHcCCC
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA-RGRTALHWASY--FGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~-~G~TPLH~Aa~--~G~~eiV~lLL~~GAD 703 (713)
+++.|+.+|+++|.+|..|+||||+|+..++..++++|+..|+++|.+|. .|.||||+|+. .|+.+++++|+++|++
T Consensus 444 ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~ 523 (672)
T PHA02730 444 VFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPT 523 (672)
T ss_pred HHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCC
Confidence 56788899999999999999999999999999999999999999999997 59999999998 4899999999999998
Q ss_pred ccc
Q 005128 704 HFL 706 (713)
Q Consensus 704 i~~ 706 (713)
+..
T Consensus 524 i~~ 526 (672)
T PHA02730 524 LET 526 (672)
T ss_pred HHH
Confidence 763
No 67
>PHA02795 ankyrin-like protein; Provisional
Probab=98.68 E-value=4.6e-08 Score=109.55 Aligned_cols=84 Identities=19% Similarity=-0.078 Sum_probs=72.5
Q ss_pred HHHHHHHhCCCCCC-cc-----cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005128 626 WLVWKIHEGGKGPN-VI-----DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLR 699 (713)
Q Consensus 626 wLvekLle~Gad~N-~~-----D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~ 699 (713)
-+++.|+..|++.. .. +..+.|++|.|+..++.+++++|+.+|+++|.+|..|+||||+|+..|+.++|++|++
T Consensus 163 eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~ 242 (437)
T PHA02795 163 SVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLE 242 (437)
T ss_pred HHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 35667778887443 22 1347889999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCc
Q 005128 700 IQHQHFLEGK 709 (713)
Q Consensus 700 ~GADi~~~~k 709 (713)
+||++..+++
T Consensus 243 ~GAdIN~~d~ 252 (437)
T PHA02795 243 NGANVNAVMS 252 (437)
T ss_pred CCCCCCCcCC
Confidence 9999998764
No 68
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.67 E-value=2e-08 Score=110.68 Aligned_cols=84 Identities=17% Similarity=0.122 Sum_probs=78.7
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
.-+++.|++.|+++|.......|||-.||.-|+.++|++|+++|+|++.+++.|+|-||.||+.||.+|+++|++.|||+
T Consensus 97 l~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADv 176 (615)
T KOG0508|consen 97 LEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADV 176 (615)
T ss_pred HHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCc
Confidence 34678888999999988888899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC
Q 005128 705 FLEG 708 (713)
Q Consensus 705 ~~~~ 708 (713)
..++
T Consensus 177 n~ks 180 (615)
T KOG0508|consen 177 NAKS 180 (615)
T ss_pred chhc
Confidence 8754
No 69
>PHA02917 ankyrin-like protein; Provisional
Probab=98.66 E-value=7.6e-08 Score=113.39 Aligned_cols=80 Identities=20% Similarity=0.135 Sum_probs=75.8
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH-cCCHHHHHHHHHcCCCc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY-FGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~-~G~~eiV~lLL~~GADi 704 (713)
..++.|+.+|+++|.+|..|+||||+|+..+...++++|+..|+++|.+|..|+||||+|+. .++.+++++|+.+|+++
T Consensus 433 ~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i 512 (661)
T PHA02917 433 STINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPTL 512 (661)
T ss_pred HHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCh
Confidence 35688899999999999999999999999999999999999999999999999999999996 78999999999999988
Q ss_pred c
Q 005128 705 F 705 (713)
Q Consensus 705 ~ 705 (713)
.
T Consensus 513 ~ 513 (661)
T PHA02917 513 D 513 (661)
T ss_pred h
Confidence 6
No 70
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=98.66 E-value=9.3e-08 Score=83.83 Aligned_cols=84 Identities=25% Similarity=0.293 Sum_probs=67.0
Q ss_pred eEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEee--ecceeeeecCC-C-CCceeEE-EEEeC
Q 005128 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVL--TDNVIRCQAPS-H-AAGRVPF-YITGS 513 (713)
Q Consensus 439 fsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~--q~GVLrC~~PP-h-~pG~V~l-~Vt~~ 513 (713)
..|+.|+|.+|+..|||+|+|.|.+|.. .....|.|+...+++.++ .+..|+|.+|+ + .++.+++ .|...
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~-----~~~~~~~~~~~~~~c~~~~~~~~~i~C~tp~~~~~~~~~~v~~v~~~ 76 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDS-----ISVVFVEVGVGEAPCTFLPSSSTAIVCKTPPYHTIPGSVPVREVGLR 76 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCc-----ceEEEEEEEeCCEEeEEeCCcceEEEEECCCCCCCCCCcCeEEEEEe
Confidence 3699999999999999999999999965 446778887766777775 57899999999 5 6888888 77776
Q ss_pred Cccccccceeeeec
Q 005128 514 NRLACSEVREFEYR 527 (713)
Q Consensus 514 n~~~cSev~eFEYr 527 (713)
+...-++...|+|.
T Consensus 77 ~~~~~~~~~~f~y~ 90 (90)
T smart00429 77 NGGVPSSPQPFTYV 90 (90)
T ss_pred CCCccCcccCeEEC
Confidence 66554554567773
No 71
>PHA02792 ankyrin-like protein; Provisional
Probab=98.65 E-value=5.7e-08 Score=112.65 Aligned_cols=84 Identities=14% Similarity=-0.077 Sum_probs=74.1
Q ss_pred HHHHHHHhCCCCCCcccCCC--CcHHHHHHHhCCHH---HHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 005128 626 WLVWKIHEGGKGPNVIDDGG--QGVVHLAAALGYEW---AMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRI 700 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G--~TpLHlAA~lG~~~---~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~ 700 (713)
-+++.|++.|+++|..|..| .||||+|+...... ++++|+..|+++|.+|..|+||||+|+..|+.+++++|+.+
T Consensus 353 eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~ 432 (631)
T PHA02792 353 KVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDN 432 (631)
T ss_pred HHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHC
Confidence 47888999999999998775 68999877766543 57888999999999999999999999999999999999999
Q ss_pred CCCccccCc
Q 005128 701 QHQHFLEGK 709 (713)
Q Consensus 701 GADi~~~~k 709 (713)
||++..+++
T Consensus 433 GADIN~kD~ 441 (631)
T PHA02792 433 GADINITTK 441 (631)
T ss_pred CCCCCCcCC
Confidence 999988765
No 72
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.62 E-value=2.6e-08 Score=80.66 Aligned_cols=46 Identities=30% Similarity=0.502 Sum_probs=27.3
Q ss_pred HHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 664 IIATG-VSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 664 LL~~G-advN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
||+.| +++|.+|..|.||||+||..|+.++|++|+..|+++.++++
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~ 47 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDK 47 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---T
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcC
Confidence 57778 99999999999999999999999999999999999998765
No 73
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.62 E-value=2e-07 Score=83.60 Aligned_cols=87 Identities=21% Similarity=0.281 Sum_probs=67.2
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecce---EeeecceeeeecCCCCC--ceeEEEEEeCC
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPA---EVLTDNVIRCQAPSHAA--GRVPFYITGSN 514 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpa---ei~q~GVLrC~~PPh~p--G~V~l~Vt~~n 514 (713)
.|++|.|..||..|||+|+|.|.+|.... +.....|++|+.+-.. .......|.|.+||+.+ +.++|.|..++
T Consensus 2 ~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~--~~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~~~~~~~~V~V~v~~ 79 (94)
T cd01180 2 VITEFFPLSGPLEGGTRLTICGSNLGLRK--NDVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAGNPVFNGPVEVTVGH 79 (94)
T ss_pred eeEEEeCCCCCCCCCEEEEEEEEcCCCCc--ccceeEEEECCEECcccCCCcCcCCEEEEECCCCCCCCcceEEEEEECC
Confidence 69999999999999999999999997532 1346789999993322 25677899999999653 77777787777
Q ss_pred cc-ccccceeeeecC
Q 005128 515 RL-ACSEVREFEYRE 528 (713)
Q Consensus 515 ~~-~cSev~eFEYr~ 528 (713)
.. .++.-..|+|.+
T Consensus 80 ~~~~~~~~~~F~Y~~ 94 (94)
T cd01180 80 GSFRTESSEGFSFVD 94 (94)
T ss_pred ceecccccCceEEeC
Confidence 64 455567788864
No 74
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.61 E-value=1.2e-07 Score=101.74 Aligned_cols=73 Identities=10% Similarity=-0.037 Sum_probs=64.6
Q ss_pred HHHHHHHhCCCCCCcc-cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHH
Q 005128 626 WLVWKIHEGGKGPNVI-DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRL 698 (713)
Q Consensus 626 wLvekLle~Gad~N~~-D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL 698 (713)
..++.|++.|+++|.. +..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..++..++.++.
T Consensus 84 eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~ 157 (300)
T PHA02884 84 DAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC 157 (300)
T ss_pred HHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc
Confidence 3567788999999986 467999999999999999999999999999999999999999999987776665544
No 75
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.53 E-value=1.2e-07 Score=110.07 Aligned_cols=92 Identities=18% Similarity=0.119 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHH-cC-CCCcccCCCCCcHHHHHHHcCC
Q 005128 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIA-TG-VSPNFRDARGRTALHWASYFGS 690 (713)
Q Consensus 613 ~LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~-~G-advN~rD~~G~TPLH~Aa~~G~ 690 (713)
..|+.+.++. ....+..|+..|++++.+++++.||||.||..|...+++.||+ .| ...|..|-.|.||||.|+..||
T Consensus 275 tpLH~a~r~G-~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH 353 (929)
T KOG0510|consen 275 TPLHYAARQG-GPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGH 353 (929)
T ss_pred chHHHHHHcC-ChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCH
Confidence 3455555544 3345566677777777777777777777777777777777777 44 3456677777777777777777
Q ss_pred HHHHHHHHHcCCCcc
Q 005128 691 WEQLRVRLRIQHQHF 705 (713)
Q Consensus 691 ~eiV~lLL~~GADi~ 705 (713)
.+|+++||.+||...
T Consensus 354 ~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 354 DRVVQLLLNKGALFL 368 (929)
T ss_pred HHHHHHHHhcChhhh
Confidence 777777777777654
No 76
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.53 E-value=6.9e-07 Score=78.95 Aligned_cols=83 Identities=27% Similarity=0.320 Sum_probs=73.2
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
-+++.+++.+.+.+..+..|.+|||.|+..+...+++.|+..|++++..+..|.||+|+|+..++.++++.|+..|.++.
T Consensus 21 ~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~ 100 (126)
T cd00204 21 EVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVN 100 (126)
T ss_pred HHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc
Confidence 35566777788878899999999999999999999999999999999999999999999999999999999999987766
Q ss_pred ccC
Q 005128 706 LEG 708 (713)
Q Consensus 706 ~~~ 708 (713)
..+
T Consensus 101 ~~~ 103 (126)
T cd00204 101 ARD 103 (126)
T ss_pred ccC
Confidence 544
No 77
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.50 E-value=1.9e-07 Score=94.96 Aligned_cols=75 Identities=19% Similarity=0.098 Sum_probs=70.5
Q ss_pred CCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccC
Q 005128 634 GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEG 708 (713)
Q Consensus 634 ~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~ 708 (713)
....+|..|+.|.|||.|||+.|+...|++|+..|++++.--+...|||.+|+..|..++|++||..+.|+.+.+
T Consensus 149 ~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyD 223 (296)
T KOG0502|consen 149 VNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYD 223 (296)
T ss_pred hhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceec
Confidence 456789999999999999999999999999999999999999999999999999999999999999999998743
No 78
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.48 E-value=5.1e-07 Score=101.51 Aligned_cols=96 Identities=28% Similarity=0.267 Sum_probs=80.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhCCCCC--C--cccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHH
Q 005128 608 PNSRDKLIQNLLRNRLCEWLVWKIHEGGKGP--N--VIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALH 683 (713)
Q Consensus 608 ~~~~d~LLq~lLk~kl~ewLvekLle~Gad~--N--~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH 683 (713)
.....+|+...+.+.+... -.|+.+|... | .-+.+|+|+||+||..|+..+.++|+.+|+|+.++|.+|+|||.
T Consensus 622 ~~lgqqLl~A~~~~Dl~t~--~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~ 699 (749)
T KOG0705|consen 622 EPLGQQLLRAVAAEDLQTA--ILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALF 699 (749)
T ss_pred CchHHHHHHHHHHHHHHHH--HHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhh
Confidence 5567888888888776643 3466666543 2 34677899999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCcc
Q 005128 684 WASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 684 ~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
||...|..+|+.+||.+|+--.
T Consensus 700 yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 700 YARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred hHhhcccHHHHHHHHHcCCCcc
Confidence 9999999999999999997543
No 79
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.46 E-value=5.3e-07 Score=78.06 Aligned_cols=56 Identities=27% Similarity=0.350 Sum_probs=52.4
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccC
Q 005128 649 VHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEG 708 (713)
Q Consensus 649 LHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~ 708 (713)
||+||..|+..+++.|++.+.+++. |.||||+|+..|+.+++++|+..|+++..++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 56 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQD 56 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BS
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccC
Confidence 7999999999999999999999887 9999999999999999999999999998764
No 80
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.45 E-value=2.5e-07 Score=97.04 Aligned_cols=72 Identities=24% Similarity=0.203 Sum_probs=67.8
Q ss_pred CCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 005128 636 KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLE 707 (713)
Q Consensus 636 ad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~ 707 (713)
-+.|.-|..|.+|||+||..|+..+++.|+.+|+.+|..+...-||||+||..||-++|..||...||+...
T Consensus 25 hdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnav 96 (448)
T KOG0195|consen 25 HDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAV 96 (448)
T ss_pred cccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchh
Confidence 466778999999999999999999999999999999999999999999999999999999999999998864
No 81
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.44 E-value=6.6e-07 Score=106.58 Aligned_cols=100 Identities=17% Similarity=0.128 Sum_probs=75.0
Q ss_pred hHHHHHHHHHHH--HHHHHHHHHHHhCCCC------CC----cccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccC--
Q 005128 610 SRDKLIQNLLRN--RLCEWLVWKIHEGGKG------PN----VIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-- 675 (713)
Q Consensus 610 ~~d~LLq~lLk~--kl~ewLvekLle~Gad------~N----~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD-- 675 (713)
..+.+|+.+.++ ...+.++..+...+.+ .+ .....|+||||+||..|+.++|++|++.|++++.++
T Consensus 81 ~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~ 160 (743)
T TIGR00870 81 VGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACG 160 (743)
T ss_pred cChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCC
Confidence 345566666652 2233344444443322 11 123569999999999999999999999999999764
Q ss_pred ------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 676 ------------ARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 676 ------------~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
..|.||||+|+..|+.+++++|++.|||+..+++
T Consensus 161 ~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~ 206 (743)
T TIGR00870 161 DFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADS 206 (743)
T ss_pred chhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhh
Confidence 3689999999999999999999999999887554
No 82
>PHA02792 ankyrin-like protein; Provisional
Probab=98.44 E-value=3.9e-07 Score=105.89 Aligned_cols=79 Identities=14% Similarity=0.021 Sum_probs=71.3
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH--c--------CCHHHHHH
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY--F--------GSWEQLRV 696 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~--~--------G~~eiV~l 696 (713)
+++.++++|+++|..|..|.||||+|+..++.+++++|+.+|+++|.+|..|.||||+|+. . ...+++++
T Consensus 392 IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~l 471 (631)
T PHA02792 392 ILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEI 471 (631)
T ss_pred HHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 5677789999999999999999999999999999999999999999999999999999976 2 23567999
Q ss_pred HHHcCCCcc
Q 005128 697 RLRIQHQHF 705 (713)
Q Consensus 697 LL~~GADi~ 705 (713)
||+.|.++.
T Consensus 472 LLs~~p~i~ 480 (631)
T PHA02792 472 ILSKLPTIE 480 (631)
T ss_pred HHhcCCChh
Confidence 999998875
No 83
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.39 E-value=5.2e-07 Score=97.22 Aligned_cols=74 Identities=24% Similarity=0.238 Sum_probs=69.4
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYFGSWEQLRVRLRI 700 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~-GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~ 700 (713)
+++.|+.+|+++|..|.+|-|+|+.||..||.+++++||.. ++|+...|.+|.|||..|-..||.+|..+|..+
T Consensus 355 ~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 355 MVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred HHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 67888999999999999999999999999999999999985 899999999999999999999999999888653
No 84
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.38 E-value=4.2e-07 Score=65.75 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=27.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 677 RGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 677 ~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
+|+||||||+..|+.++|++||.+||++.+++|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 578888888888888888888888888888765
No 85
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.37 E-value=8e-07 Score=86.06 Aligned_cols=77 Identities=27% Similarity=0.276 Sum_probs=71.1
Q ss_pred HHHHHHHHhCCC---CCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 005128 625 EWLVWKIHEGGK---GPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQ 701 (713)
Q Consensus 625 ewLvekLle~Ga---d~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~G 701 (713)
..+++.+++.|+ ..+..|..|.||||+|+..|+..++++|+..|++++.++..|.|+|++|+..|+.+++..|+..+
T Consensus 124 ~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 124 IEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred HHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 346788889999 56667999999999999999999999999999999999999999999999999999999999975
No 86
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=98.34 E-value=3.1e-06 Score=74.26 Aligned_cols=79 Identities=20% Similarity=0.207 Sum_probs=67.0
Q ss_pred eEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCCCCCceeEEEEEeCCcccc
Q 005128 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLAC 518 (713)
Q Consensus 439 fsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PPh~pG~V~l~Vt~~n~~~c 518 (713)
..|..++|.-|.. |++|+|.|.+|... .-.++||+.+++...|+|..|.|.+|.+.||...+.|+-.++..
T Consensus 3 P~I~~i~P~~g~~--G~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~vP~~~aG~~~V~V~~~~G~~- 73 (81)
T cd02849 3 PLIGHVGPMMGKA--GNTVTISGEGFGSA------PGTVYFGTTAATVISWSDTRIVVTVPNVPAGNYDVTVKTADGAT- 73 (81)
T ss_pred CEEeeEcCCCCCC--CCEEEEEEECCCCC------CcEEEECCEEeEEEEECCCEEEEEeCCCCCceEEEEEEeCCCcc-
Confidence 3699999999987 88999999999642 35799999999998999999999999999999999999775553
Q ss_pred ccceeeee
Q 005128 519 SEVREFEY 526 (713)
Q Consensus 519 Sev~eFEY 526 (713)
|....|+|
T Consensus 74 Sn~~~f~~ 81 (81)
T cd02849 74 SNGYNFEV 81 (81)
T ss_pred cCcEeeEC
Confidence 55555664
No 87
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=98.32 E-value=1.2e-06 Score=86.50 Aligned_cols=83 Identities=17% Similarity=0.086 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH-H
Q 005128 615 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWE-Q 693 (713)
Q Consensus 615 Lq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~e-i 693 (713)
|+.+.-+. +.-++..|+..|++++.+...|+||||-||.-...+++.+||.+|+|||+....-+||||.||-..+.. .
T Consensus 101 LHRAaYn~-h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t 179 (228)
T KOG0512|consen 101 LHRAAYNG-HLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDT 179 (228)
T ss_pred HHHHHhcC-chHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhhcccchHHH
Confidence 34444333 344778889999999999999999999999999999999999999999999999999999999876544 4
Q ss_pred HHHHH
Q 005128 694 LRVRL 698 (713)
Q Consensus 694 V~lLL 698 (713)
+.+|+
T Consensus 180 ~~~Ll 184 (228)
T KOG0512|consen 180 LELLL 184 (228)
T ss_pred HHHHh
Confidence 55554
No 88
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.31 E-value=2.4e-06 Score=77.60 Aligned_cols=72 Identities=22% Similarity=0.482 Sum_probs=56.7
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCe-ecceEeeecceeeeecCCCCC-------ceeEEEEE
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNVIRCQAPSHAA-------GRVPFYIT 511 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpaei~q~GVLrC~~PPh~p-------G~V~l~Vt 511 (713)
+|++|+|.|+|..|||.|+|+|.+|... ....+.++||+. .++..+..+..++|.+|+... +..++.+.
T Consensus 2 ~I~~i~P~~g~~SGGt~itV~G~~Lds~---q~p~~~V~~~~~~~~~C~v~s~~~i~C~tP~~~~~~~~~~~~~~~~~~~ 78 (99)
T cd01181 2 TITRIEPEWSFLSGGTPITVTGTNLNTV---QEPRIRVKYGGVEKTSCKVRNSTLMTCPAPSLALLNRSPEPGERPVEFG 78 (99)
T ss_pred EEEEeccCCCccCCCEEEEEEeeccCcc---cccEEEEEECCceeccceeCCCCEEEeCCCCCcccccccCCCCcCeEEE
Confidence 6999999999999999999999999653 345899999996 346667888999999998332 55555555
Q ss_pred eCC
Q 005128 512 GSN 514 (713)
Q Consensus 512 ~~n 514 (713)
.+.
T Consensus 79 fd~ 81 (99)
T cd01181 79 LDG 81 (99)
T ss_pred Eec
Confidence 443
No 89
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.29 E-value=2.7e-07 Score=106.92 Aligned_cols=72 Identities=25% Similarity=0.354 Sum_probs=68.7
Q ss_pred CCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 638 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA-RGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 638 ~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~-~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
.|.+|..|+|+||+|+..+...++++|+.+|++++.+|. .||||||-|.++|+.+|+-+||.+|+.+.+++|
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dk 117 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDK 117 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecc
Confidence 577899999999999999999999999999999999996 699999999999999999999999999999877
No 90
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.29 E-value=5.3e-07 Score=104.24 Aligned_cols=93 Identities=19% Similarity=0.137 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 005128 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQ 693 (713)
Q Consensus 614 LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~ei 693 (713)
+.+.+|....+ ++..|+++.+-...+|..|.+|||+||..|+.+++++|+.++..+|+....|.||||.|+..||.++
T Consensus 53 lhha~Lng~~~--is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dv 130 (854)
T KOG0507|consen 53 LHHAVLNGQNQ--ISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEV 130 (854)
T ss_pred HHHHHhcCchH--HHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHH
Confidence 33444444433 5566666666677778888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHcCCCccccC
Q 005128 694 LRVRLRIQHQHFLEG 708 (713)
Q Consensus 694 V~lLL~~GADi~~~~ 708 (713)
|.+|+.+|+|..++.
T Consensus 131 v~~Ll~~~adp~i~n 145 (854)
T KOG0507|consen 131 VFYLLKKNADPFIRN 145 (854)
T ss_pred HHHHHhcCCCccccC
Confidence 888888888877654
No 91
>PF13606 Ank_3: Ankyrin repeat
Probab=98.28 E-value=8.7e-07 Score=63.37 Aligned_cols=29 Identities=28% Similarity=0.262 Sum_probs=24.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 677 RGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 677 ~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
+|+||||+||..|+.++|++||++|+|+.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 58888888888888888888888888875
No 92
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.28 E-value=3.5e-06 Score=100.42 Aligned_cols=87 Identities=17% Similarity=0.031 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCC---HHHHHHHHHcCCC------Cc----ccCCCCCcHHH
Q 005128 617 NLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY---EWAMRPIIATGVS------PN----FRDARGRTALH 683 (713)
Q Consensus 617 ~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~---~~~V~lLL~~Gad------vN----~rD~~G~TPLH 683 (713)
.+..+. ..-+++.|++.|+ .+..|.||||+|+..++ ..++..+...+.+ ++ .....|.||||
T Consensus 59 ~A~~~~-~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLh 133 (743)
T TIGR00870 59 AAIENE-NLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALH 133 (743)
T ss_pred HHHhcC-hHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHH
Confidence 344333 3345556666555 45667777777665222 1222333333321 11 12356999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCccccC
Q 005128 684 WASYFGSWEQLRVRLRIQHQHFLEG 708 (713)
Q Consensus 684 ~Aa~~G~~eiV~lLL~~GADi~~~~ 708 (713)
+||..|+.++|++|+..||++..+.
T Consensus 134 lAa~~~~~eiVklLL~~GAdv~~~~ 158 (743)
T TIGR00870 134 LAAHRQNYEIVKLLLERGASVPARA 158 (743)
T ss_pred HHHHhCCHHHHHHHHhCCCCCCcCc
Confidence 9999999999999999999998653
No 93
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.27 E-value=3.9e-06 Score=74.13 Aligned_cols=67 Identities=28% Similarity=0.364 Sum_probs=62.5
Q ss_pred ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 005128 641 IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLE 707 (713)
Q Consensus 641 ~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~ 707 (713)
.|..|.||||.|+..|+..+++.|+..|.+++.+|..|.||||+|+..++.+++..|+..|+++...
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 69 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNAR 69 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 5678999999999999999999999999999999999999999999999999999999999766653
No 94
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.17 E-value=3.3e-06 Score=99.88 Aligned_cols=62 Identities=34% Similarity=0.369 Sum_probs=59.1
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 648 VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 648 pLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
.||.||..|+..+++.|+..|+++|.+|..|+||||+||..|+.++|++|+.+||++.++++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~ 146 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK 146 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Confidence 48899999999999999999999999999999999999999999999999999999988765
No 95
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.07 E-value=1.3e-05 Score=89.30 Aligned_cols=73 Identities=23% Similarity=0.312 Sum_probs=66.7
Q ss_pred HHHHhCCCCCCccc-CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 005128 629 WKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQ 701 (713)
Q Consensus 629 ekLle~Gad~N~~D-~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~G 701 (713)
-+|+..|+++|..+ +.|-||||+||..|...-+++|+-.|||+++.|.+|.||+.+|...||-+++..|++..
T Consensus 150 LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 150 LRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAERLVEIQ 223 (669)
T ss_pred HHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHHHH
Confidence 46778899999765 66999999999999999999999999999999999999999999999999998887654
No 96
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.03 E-value=9.4e-06 Score=91.16 Aligned_cols=66 Identities=26% Similarity=0.280 Sum_probs=60.7
Q ss_pred CCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 005128 635 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRI 700 (713)
Q Consensus 635 Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~ 700 (713)
+..++..|..|.||||+|+.+|+..+++.|+.+|+++..+++.||+|||-|+..|+.+++..+|.+
T Consensus 45 ~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 45 SLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred hceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 456777899999999999999999999999999999999999999999999999999998777653
No 97
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.02 E-value=4.1e-06 Score=92.75 Aligned_cols=76 Identities=24% Similarity=0.236 Sum_probs=69.2
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIA-TGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQH 702 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~-~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GA 702 (713)
-++++.-.|.+++..|.+.+|+||.||+.|+..++++|+. .+++++.+|+.|+|||.-|..++|.+++++|-++..
T Consensus 521 alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 521 ALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred HHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHhc
Confidence 3455666789999999999999999999999999999998 599999999999999999999999999999987654
No 98
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.00 E-value=9.1e-06 Score=58.74 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=31.2
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCC
Q 005128 644 GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA 676 (713)
Q Consensus 644 ~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~ 676 (713)
+|.||||+||..|+.+++++|+.+|++++.+|.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999999874
No 99
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=97.99 E-value=4.6e-05 Score=66.95 Aligned_cols=79 Identities=22% Similarity=0.229 Sum_probs=66.6
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCCCCCceeEEEEEeCCccccc
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACS 519 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PPh~pG~V~l~Vt~~n~~~cS 519 (713)
.|..++|.-|. -|++|+|.|.+|.+. .-.++||+.+++...|++..|.|.+|.+.+|...+.|+..++.. |
T Consensus 2 ~I~~i~P~~g~--pG~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~VP~~~~g~~~i~V~~~~G~~-S 72 (81)
T cd00604 2 LIGSVGPVMGK--PGNTVTISGEGFGST------GGTVYFGGTAAEVLSWSDTSIVVEVPRVAPGNYNISVTTVDGVT-S 72 (81)
T ss_pred eEeeEcCCCCC--CCCEEEEEEECCCCC------ccEEEECCEEEEEEEECCCEEEEEeCCCCCCceEEEEEECCCcc-c
Confidence 58899999887 688999999999652 24699999999998899999999999999999999999766554 6
Q ss_pred cceeeeec
Q 005128 520 EVREFEYR 527 (713)
Q Consensus 520 ev~eFEYr 527 (713)
....|+|.
T Consensus 73 n~~~f~~l 80 (81)
T cd00604 73 NGYNFEVL 80 (81)
T ss_pred CcEeEEEc
Confidence 66668874
No 100
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=97.91 E-value=2.7e-05 Score=82.16 Aligned_cols=85 Identities=22% Similarity=0.200 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCc-ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 005128 612 DKLIQNLLRNRLCEWLVWKIHEGGKGPNV-IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGS 690 (713)
Q Consensus 612 d~LLq~lLk~kl~ewLvekLle~Gad~N~-~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~ 690 (713)
.-|.+...+.++. +++++++.|+|+|. .+..+.||||.||.-|...+.++|+++|+.+...+.-|+||-..||+-||
T Consensus 47 s~LahAaykGnl~--~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~ 124 (396)
T KOG1710|consen 47 SVLAHAAYKGNLT--LVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGH 124 (396)
T ss_pred cHHHHHHhcCcHH--HHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcc
Confidence 3456666666654 78899999999994 56779999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 005128 691 WEQLRVRL 698 (713)
Q Consensus 691 ~eiV~lLL 698 (713)
.+||..+-
T Consensus 125 H~CV~iIN 132 (396)
T KOG1710|consen 125 HECVAIIN 132 (396)
T ss_pred hHHHHHHh
Confidence 99998764
No 101
>PF13606 Ank_3: Ankyrin repeat
Probab=97.90 E-value=1.4e-05 Score=57.10 Aligned_cols=30 Identities=27% Similarity=0.338 Sum_probs=28.4
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCcc
Q 005128 644 GGQGVVHLAAALGYEWAMRPIIATGVSPNF 673 (713)
Q Consensus 644 ~G~TpLHlAA~lG~~~~V~lLL~~GadvN~ 673 (713)
+|+||||+||..|+.+++++|+++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999984
No 102
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.79 E-value=5.9e-05 Score=88.48 Aligned_cols=96 Identities=23% Similarity=0.249 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcc--------cC---------------CCCcHHHHHHHhCCHHHHHHHHHcCC
Q 005128 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVI--------DD---------------GGQGVVHLAAALGYEWAMRPIIATGV 669 (713)
Q Consensus 613 ~LLq~lLk~kl~ewLvekLle~Gad~N~~--------D~---------------~G~TpLHlAA~lG~~~~V~lLL~~Ga 669 (713)
..|+.++.++ ...++..|++.|||++++ +. -|..||-+||-.+..+++++|+++||
T Consensus 186 SaLHiAIv~~-~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gA 264 (782)
T KOG3676|consen 186 SALHIAIVNR-DAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGA 264 (782)
T ss_pred chHHHHHHhc-cHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCC
Confidence 3455555555 345788999999998743 22 25679999999999999999999999
Q ss_pred CCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--ccccCc
Q 005128 670 SPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQ--HFLEGK 709 (713)
Q Consensus 670 dvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD--i~~~~k 709 (713)
|++++|.+|+|.||.-+.+-..+|-.++|++||+ ..++.|
T Consensus 265 d~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~ 306 (782)
T KOG3676|consen 265 DPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNN 306 (782)
T ss_pred CCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCcccccccc
Confidence 9999999999999999999888999999999999 544443
No 103
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=97.71 E-value=3.9e-05 Score=69.18 Aligned_cols=62 Identities=23% Similarity=0.206 Sum_probs=57.1
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCccc
Q 005128 649 VHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGKLL 711 (713)
Q Consensus 649 LHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~kl~ 711 (713)
+.|+..+|-.+.|+-.+..|.++|..- .|+||||+||-+|..+++++|+..||++..++||=
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKyg 67 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYG 67 (117)
T ss_pred HhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccC
Confidence 578899999999999999999998644 89999999999999999999999999999999984
No 104
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.57 E-value=3.4e-05 Score=92.10 Aligned_cols=82 Identities=16% Similarity=0.022 Sum_probs=68.5
Q ss_pred HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 005128 624 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNF-RDARGRTALHWASYFGSWEQLRVRLRIQH 702 (713)
Q Consensus 624 ~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~-rD~~G~TPLH~Aa~~G~~eiV~lLL~~GA 702 (713)
+.-++++++..|+++..+|+.|.+||.+|+..||..+|..|+.+.+++.+ .|+.+-|+|.+||..|+.++|.+||.+||
T Consensus 769 h~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~ga 848 (2131)
T KOG4369|consen 769 HREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGA 848 (2131)
T ss_pred cHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhc
Confidence 35567778888888888899999999999999998888888888888887 67888888888888888888888888887
Q ss_pred Ccc
Q 005128 703 QHF 705 (713)
Q Consensus 703 Di~ 705 (713)
+-.
T Consensus 849 nke 851 (2131)
T KOG4369|consen 849 NKE 851 (2131)
T ss_pred ccc
Confidence 644
No 105
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=97.56 E-value=0.00019 Score=57.18 Aligned_cols=40 Identities=25% Similarity=0.249 Sum_probs=31.4
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHH
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPII 665 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL 665 (713)
-+++.+++.|.++|..|.+|+||||+||..|+..++++|+
T Consensus 15 ~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 15 EIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp HHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 3567777889999999999999999999999999999986
No 106
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=97.56 E-value=0.00011 Score=85.56 Aligned_cols=74 Identities=23% Similarity=0.212 Sum_probs=69.5
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRI 700 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~ 700 (713)
.+.+++..+..+|.....|.||||+||..||.+++.+|+.+|+++-.++.++.|+|-.|+.+|+.++|++|+..
T Consensus 97 ~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~ 170 (854)
T KOG0507|consen 97 IVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQK 170 (854)
T ss_pred HHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhh
Confidence 45666777788999999999999999999999999999999999999999999999999999999999999987
No 107
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.53 E-value=0.00013 Score=79.35 Aligned_cols=59 Identities=24% Similarity=0.164 Sum_probs=54.9
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 646 QGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 646 ~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
..-|-.||..|-.+.|+.|++.|++||.+|.....||-+|+.+||+.+|++||+.||--
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC 95 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC 95 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc
Confidence 45578899999999999999999999999999999999999999999999999999853
No 108
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.29 E-value=0.00055 Score=80.60 Aligned_cols=76 Identities=22% Similarity=0.259 Sum_probs=70.1
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCC--CcccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 005128 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS--PNFRDARGRTALHWASYFGSWEQLRVRLRI 700 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~Gad--vN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~ 700 (713)
.-+++.|++.|+|++++|..|.|.||+....-...+-.+++.+|++ ...+++.|-|||.+||.-|+.++.+.+++.
T Consensus 253 ~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 253 PEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred HHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 3467788899999999999999999999999888888999999999 888999999999999999999999999887
No 109
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.21 E-value=0.00061 Score=68.56 Aligned_cols=66 Identities=18% Similarity=0.058 Sum_probs=62.9
Q ss_pred CCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 005128 635 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGSWEQLRVRLRI 700 (713)
Q Consensus 635 Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~G-advN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~ 700 (713)
+.++|++|..|+|+|+.||..|..+++.+|+.+| +.|..+|..|.+++.+|-..|+.++|..|.+.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 4578999999999999999999999999999999 89999999999999999999999999999875
No 110
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.14 E-value=0.00075 Score=76.41 Aligned_cols=95 Identities=20% Similarity=0.203 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCC--CcccCCCCCcHHHHHHH
Q 005128 610 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS--PNFRDARGRTALHWASY 687 (713)
Q Consensus 610 ~~d~LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~Gad--vN~rD~~G~TPLH~Aa~ 687 (713)
..+.+|+.++...+.. +.+ ....|.+.-..+.+..++||+|+..|.-++|+++|.+|.. +++.|.+|.|+||-||.
T Consensus 866 iseeil~av~~~D~~k-lqE-~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~ 943 (1004)
T KOG0782|consen 866 ISEEILRAVLSSDLMK-LQE-THLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAAC 943 (1004)
T ss_pred ccHHHHHHHHhccHHH-HHH-HHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHH
Confidence 4456788887776542 222 2335556667889999999999999999999999999864 56788999999999999
Q ss_pred cCCHHHHHHHHHcCCCccc
Q 005128 688 FGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 688 ~G~~eiV~lLL~~GADi~~ 706 (713)
.++-.+..+|+.+||.+.-
T Consensus 944 ~~~r~vc~~lvdagasl~k 962 (1004)
T KOG0782|consen 944 QRNRAVCQLLVDAGASLRK 962 (1004)
T ss_pred hcchHHHHHHHhcchhhee
Confidence 9999999999999998763
No 111
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.11 E-value=0.00041 Score=83.36 Aligned_cols=86 Identities=21% Similarity=0.157 Sum_probs=62.9
Q ss_pred HHHHHHHHhCCCCCCcc--cCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccc-CCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 005128 625 EWLVWKIHEGGKGPNVI--DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFR-DARGRTALHWASYFGSWEQLRVRLRIQ 701 (713)
Q Consensus 625 ewLvekLle~Gad~N~~--D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~r-D~~G~TPLH~Aa~~G~~eiV~lLL~~G 701 (713)
.-++..++..|+.+|.+ .+.|-.||++|+..||..+++.|+..|.++|++ ..+.+|+|-+|++.|+.++|.+||.+.
T Consensus 870 ~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~ 949 (2131)
T KOG4369|consen 870 TKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQ 949 (2131)
T ss_pred HHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHh
Confidence 34566677777777644 456777888888888888888788888777773 456677788888788888888887777
Q ss_pred CCccccCcc
Q 005128 702 HQHFLEGKL 710 (713)
Q Consensus 702 ADi~~~~kl 710 (713)
|+...|+|-
T Consensus 950 anvehRakt 958 (2131)
T KOG4369|consen 950 ANVEHRAKT 958 (2131)
T ss_pred hhhhhhccc
Confidence 777776664
No 112
>cd00602 IPT_TF IPT domain of eukaryotic transcription factors NF-kappaB/Rel, nuclear factor of activated Tcells (NFAT), and recombination signal J-kappa binding protein (RBP-Jkappa). The IPT domains in these proteins are involved in DNA binding. Most NF-kappaB/Rel proteins form homo- and heterodimers, while NFAT proteins are largely monomeric (with TonEBP being an exception). While the majority of sequence-specific DNA binding elements are found in the N-terminal domain, several are found in the IPT domain in loops adjacent to, and including, the linker region.
Probab=96.42 E-value=0.014 Score=53.55 Aligned_cols=82 Identities=21% Similarity=0.226 Sum_probs=66.8
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCC-------eecceEee----ecceeeeecCC-CC-----
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE-------IEVPAEVL----TDNVIRCQAPS-HA----- 502 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd-------~eVpaei~----q~GVLrC~~PP-h~----- 502 (713)
.|.+++-.-++..||.+|.++|..+. +...-|.|++ .|+-|.+- +-..|+|.+|| |.
T Consensus 2 ~I~r~s~~s~~~~GG~ev~Ll~~k~~------k~dikV~F~e~~~g~~~WE~~~~f~~~dv~q~aiv~~tP~y~~~~i~~ 75 (101)
T cd00602 2 PICRVSSLSGSVNGGDEVFLLCDKVN------KPDIKVWFGEKGPGETVWEAEAMFRQEDVRQVAIVFKTPPYHNKWITR 75 (101)
T ss_pred ceEEEeCCeeEcCCCcEEEEEecCCC------CCCCEEEEEecCCCCCeEEEEEEECHHHceEeEEEecCCCcCCCCccc
Confidence 48899999999999999999999873 2367899999 66666653 66679999999 55
Q ss_pred CceeEEEEEeCCccccccceeeeec
Q 005128 503 AGRVPFYITGSNRLACSEVREFEYR 527 (713)
Q Consensus 503 pG~V~l~Vt~~n~~~cSev~eFEYr 527 (713)
|=.|+|++.-.....+|+...|+|.
T Consensus 76 pV~V~i~L~r~~~~~~S~~~~FtY~ 100 (101)
T cd00602 76 PVQVPIQLVRPDDRKRSEPLTFTYT 100 (101)
T ss_pred cEEEEEEEEeCCCCeecCCcCeEEc
Confidence 4478888887777889999999995
No 113
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.26 E-value=0.0073 Score=39.00 Aligned_cols=29 Identities=31% Similarity=0.337 Sum_probs=23.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 677 RGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 677 ~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.|+||||+|+..|+.++++.|+..|+++.
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47788888888888888888888887653
No 114
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=96.16 E-value=0.0036 Score=70.12 Aligned_cols=68 Identities=25% Similarity=0.160 Sum_probs=59.7
Q ss_pred ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCccccC
Q 005128 641 IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLR-IQHQHFLEG 708 (713)
Q Consensus 641 ~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~-~GADi~~~~ 708 (713)
.+.++.-.+++||..|...+++.+.-.|.|++.+|-+.+|+||.||..||.+++++||. ++.+.+.++
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kD 570 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKD 570 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhh
Confidence 45667788999999999999999999999999999999999999999999999999985 556655543
No 115
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.13 E-value=0.0034 Score=75.61 Aligned_cols=70 Identities=23% Similarity=0.250 Sum_probs=36.9
Q ss_pred HHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHH
Q 005128 628 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVR 697 (713)
Q Consensus 628 vekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lL 697 (713)
.+.|++.|+++|.+|..|+||||.+...|+...+..|+..|++.++.|..|.+||++|....+.+++-+|
T Consensus 672 ~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~d~~~l~ 741 (785)
T KOG0521|consen 672 VELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAANADIVLLL 741 (785)
T ss_pred HHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhccccHHHHH
Confidence 3444455555555555555555555555555555555555555555555555555555444444444443
No 116
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=95.94 E-value=0.013 Score=66.16 Aligned_cols=67 Identities=21% Similarity=0.181 Sum_probs=58.6
Q ss_pred cccCCCCcH------HHHHHHhCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 640 VIDDGGQGV------VHLAAALGYEWAMRPIIATGVSPNFRDA-RGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 640 ~~D~~G~Tp------LHlAA~lG~~~~V~lLL~~GadvN~rD~-~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
.+|.+|.+. ||..+.-|+.+..-.||..||++|+-+. .|.||||.||..|..--+.+|+-+|||+..
T Consensus 122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a 195 (669)
T KOG0818|consen 122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA 195 (669)
T ss_pred CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCC
Confidence 356666554 8999999999887778899999999765 699999999999999999999999999875
No 117
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.91 E-value=0.0083 Score=68.18 Aligned_cols=63 Identities=22% Similarity=0.255 Sum_probs=51.3
Q ss_pred cHHHHHHHhCCHHHHHH--HHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 647 GVVHLAAALGYEWAMRP--IIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 647 TpLHlAA~lG~~~~V~l--LL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
-|||++.......-+.. +...+..++.+|..|.||||.|+..||..+++.|+.+||++.++.+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~ 86 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNN 86 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcccccc
Confidence 45888887665554443 3335678889999999999999999999999999999999988754
No 118
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=95.84 E-value=0.0073 Score=72.86 Aligned_cols=72 Identities=25% Similarity=0.235 Sum_probs=64.8
Q ss_pred CCCCCc--ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 635 GKGPNV--IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 635 Gad~N~--~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
+...|. .-..|.|+||.|+..|..-++++|+..|+++|.+|..|.||||.+...|+...+.+|++.||+..+
T Consensus 644 ~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a 717 (785)
T KOG0521|consen 644 GCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNA 717 (785)
T ss_pred hhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccc
Confidence 444442 346689999999999999999999999999999999999999999999999999999999999776
No 119
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=95.80 E-value=0.012 Score=69.82 Aligned_cols=57 Identities=23% Similarity=0.275 Sum_probs=52.7
Q ss_pred HHhCCCCCCcccCC-CCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 005128 631 IHEGGKGPNVIDDG-GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY 687 (713)
Q Consensus 631 Lle~Gad~N~~D~~-G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~ 687 (713)
|+.+|++++..|+. |.||||.|...|+.+++-+||.+|+.+-.+|..|..||.+-++
T Consensus 71 LlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 71 LLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred HHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHHhh
Confidence 45669999999865 9999999999999999999999999999999999999998876
No 120
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=95.49 E-value=0.036 Score=68.15 Aligned_cols=93 Identities=20% Similarity=0.189 Sum_probs=75.7
Q ss_pred cccCCceEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCe-ecceEeeecce-eeeecCC-CCCceeEEE
Q 005128 433 LSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNV-IRCQAPS-HAAGRVPFY 509 (713)
Q Consensus 433 ~sq~qlfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpaei~q~GV-LrC~~PP-h~pG~V~l~ 509 (713)
..--|.+.|..+.|.||+..|||.|+++|+.+.. .+.-.|++|+. .-+....+++. |+|..++ -.++.-++.
T Consensus 137 ~~s~~~~~~~~~~P~~Gp~~ggt~v~~~Gs~l~~-----gs~~~~vv~~~~~c~~~~~~~~~~~~c~t~~~~~~~~~~~~ 211 (1025)
T KOG3610|consen 137 GSSLQGPCFLSAEPVNGPASGGTQVHCTGSPLDT-----GSCPDCVVSGLGPCVISVVQDSAVIFCVTSSQGAGSEAPVL 211 (1025)
T ss_pred ceeecceeEEeeccCcCCCCCCcceEEecccccc-----CCCceEEecCCccceeEeecCceEEEEecCCCCCCCccceE
Confidence 3345677999999999999999999999999854 36789999999 77888888887 9999999 445888888
Q ss_pred EEeCCccccccceeeeecCCC
Q 005128 510 ITGSNRLACSEVREFEYREKP 530 (713)
Q Consensus 510 Vt~~n~~~cSev~eFEYr~~~ 530 (713)
|..+....-.....|+|...+
T Consensus 212 v~f~~~~~~~~~~~f~y~~dp 232 (1025)
T KOG3610|consen 212 VSFDRTPQKLTPLAFNYTADP 232 (1025)
T ss_pred EEecccccccCCCCcccccCC
Confidence 988876654445678887544
No 121
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=95.26 E-value=0.028 Score=63.98 Aligned_cols=60 Identities=23% Similarity=0.170 Sum_probs=53.7
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 005128 648 VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLE 707 (713)
Q Consensus 648 pLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~ 707 (713)
+|.-|+..|-.++|+.++..-.|+...+..|.||||-|+..||.+||++||..||++..-
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~ 612 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAA 612 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCc
Confidence 445588899999999998887888888899999999999999999999999999998763
No 122
>cd01178 IPT_NFAT IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
Probab=95.16 E-value=0.091 Score=48.26 Aligned_cols=81 Identities=21% Similarity=0.269 Sum_probs=58.2
Q ss_pred eEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCe--------ecce----EeeecceeeeecCC-CC---
Q 005128 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI--------EVPA----EVLTDNVIRCQAPS-HA--- 502 (713)
Q Consensus 439 fsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~--------eVpa----ei~q~GVLrC~~PP-h~--- 502 (713)
..|.+.|-.-++..||-||+++|..+.. .-.|.|-+. |+-| +.++...|+|.+|| |.
T Consensus 2 p~I~r~s~~s~sv~GG~Ev~Ll~~k~~k-------DikV~F~E~~~dG~~~WE~~a~f~~~~~hQ~aIvf~tPpY~~~~I 74 (101)
T cd01178 2 PEIEKKSLNSCSVNGGEELFLTGKNFLK-------DSKVVFQEKGQDGEAQWEAEATIDKEKSHQNHLVVEVPPYHNKHV 74 (101)
T ss_pred CeeEEeccCceeecCCCEEEEEehhcCC-------CCEEEEEEeCCCCccceEEEEEeChHhceeeeEEEecCCCCCCCc
Confidence 4699999999999999999999997732 123444321 2222 33567899999999 54
Q ss_pred --CceeEEEEEeCCccccccceeeeec
Q 005128 503 --AGRVPFYITGSNRLACSEVREFEYR 527 (713)
Q Consensus 503 --pG~V~l~Vt~~n~~~cSev~eFEYr 527 (713)
|=.|.|+|.... -.+|+...|+|.
T Consensus 75 ~~pV~V~~~l~~~~-~~~S~~~~FtY~ 100 (101)
T cd01178 75 AAPVQVQFYVVNGK-RKRSQPQTFTYT 100 (101)
T ss_pred CCceEEEEEEEcCC-CCcCCCCCcEec
Confidence 556777776543 457999999995
No 123
>cd01176 IPT_RBP-Jkappa IPT domain of the recombination signal Jkappa binding protein (RBP-Jkappa). RBP-J kappa, was initially considered to be involved in V(D)J recombination because of its DNA binding specificity and structural similarity to site-specific recombinases known as the integrase family. Further studies indicated that RBP-J kappa functions as a repressor of transcription, via destabilization of the general transcription factor IID and recruitment of histone deacetylase complexes.
Probab=94.76 E-value=0.11 Score=46.59 Aligned_cols=66 Identities=15% Similarity=0.299 Sum_probs=54.2
Q ss_pred eEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCCC-----------CCceeEEEEEeCCcccccccee
Q 005128 455 TKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-----------AAGRVPFYITGSNRLACSEVRE 523 (713)
Q Consensus 455 tKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PPh-----------~pG~V~l~Vt~~n~~~cSev~e 523 (713)
.-+-++|.+|.. ++-+.||++++-+-+-..-.|.|.+|+- +|..||+.+.-..+..-+--..
T Consensus 20 amlEl~GenF~p-------nLkVWFG~veaeTmyR~~e~l~CvvPdis~f~~~w~~~~~p~~VPisLVR~DGvIY~T~lt 92 (97)
T cd01176 20 AMLELHGENFTP-------NLKVWFGDVEAETMYRCEESLLCVVPDISAFREEWRWVRQPVQVPISLVRNDGIIYPTGLT 92 (97)
T ss_pred EEEEEecCcCCC-------CceEEECCcceEEEEEccceeEEecCCHHHhccCceEecCceEeeEEEEecCCeEecCCce
Confidence 567788999954 8999999999999888999999999973 5678888888777776666677
Q ss_pred eeec
Q 005128 524 FEYR 527 (713)
Q Consensus 524 FEYr 527 (713)
|+|.
T Consensus 93 FtYt 96 (97)
T cd01176 93 FTYT 96 (97)
T ss_pred EEec
Confidence 8774
No 124
>cd01177 IPT_NFkappaB IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to certain chemicals. NFkappaB blocking cell apoptosis in several cell types, gives it an important role in cell proliferation and differentiation.
Probab=94.71 E-value=0.13 Score=47.37 Aligned_cols=82 Identities=17% Similarity=0.147 Sum_probs=57.5
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCe-------ec-----ceEeeecceeeeecCC-CCC---
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-------EV-----PAEVLTDNVIRCQAPS-HAA--- 503 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-------eV-----paei~q~GVLrC~~PP-h~p--- 503 (713)
.|.+++=.-|++.||.||.+++....- -.-.|.|-+. +. |+.+-..-.|++.+|| |.+
T Consensus 2 ~I~r~s~~sgsv~GG~Ev~LLcdKV~K------~dI~VrF~e~~~~~~~We~~g~f~~~dVH~Q~AIvfkTPpY~~~~I~ 75 (102)
T cd01177 2 KICRLDKTSGSVKGGDEVYLLCDKVQK------EDIQVRFFEEDEEETVWEAFGDFSQTDVHRQYAIVFRTPPYHDPDIT 75 (102)
T ss_pred EEEEecCcccccCCCcEEEEEecccCC------CCCEEEEEEcCCCCCceEEEeeECHHHcccceEEEEeCCCCCCCcCC
Confidence 699999999999999999999986632 1233444332 22 2333344568889999 664
Q ss_pred --ceeEEEEEeCCccccccceeeeec
Q 005128 504 --GRVPFYITGSNRLACSEVREFEYR 527 (713)
Q Consensus 504 --G~V~l~Vt~~n~~~cSev~eFEYr 527 (713)
=.|-+++.-.....+|+...|+|.
T Consensus 76 ~pV~V~iqL~Rpsd~~~Sep~~F~Y~ 101 (102)
T cd01177 76 EPVKVKIQLKRPSDGERSESVPFTYV 101 (102)
T ss_pred CceEEEEEEEeCCCCCccCCcceEEc
Confidence 456666666555568999999995
No 125
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.70 E-value=0.031 Score=66.70 Aligned_cols=32 Identities=22% Similarity=0.124 Sum_probs=28.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 675 DARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 675 D~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
-..+-|||++||..++.+|+++||..|+.+..
T Consensus 128 ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 128 FTPDITPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred CCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 34567999999999999999999999998764
No 126
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=94.58 E-value=0.054 Score=61.95 Aligned_cols=88 Identities=18% Similarity=0.152 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC--CCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Q 005128 612 DKLIQNLLRNRLCEWLVWKIHEGGKG--PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 689 (713)
Q Consensus 612 d~LLq~lLk~kl~ewLvekLle~Gad--~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G 689 (713)
-.||+.+.+..-. -++.-++++|.. .+..|+.|.|+||.||..+...+..+|+.+|+.+...|..|.||-.-|-..|
T Consensus 900 ~sllh~a~~tg~~-eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~ 978 (1004)
T KOG0782|consen 900 CSLLHYAAKTGNG-EIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAG 978 (1004)
T ss_pred hhHHHHHHhcCCh-HHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcC
Confidence 3556666655423 355666666532 3567899999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHc
Q 005128 690 SWEQLRVRLRI 700 (713)
Q Consensus 690 ~~eiV~lLL~~ 700 (713)
..+.+++|-..
T Consensus 979 d~dlaayle~r 989 (1004)
T KOG0782|consen 979 DPDLAAYLESR 989 (1004)
T ss_pred CchHHHHHhhh
Confidence 99999988643
No 127
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=94.16 E-value=0.088 Score=33.67 Aligned_cols=29 Identities=28% Similarity=0.380 Sum_probs=26.3
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCc
Q 005128 644 GGQGVVHLAAALGYEWAMRPIIATGVSPN 672 (713)
Q Consensus 644 ~G~TpLHlAA~lG~~~~V~lLL~~GadvN 672 (713)
.|.|+||+|+..|...+++.|+..|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47899999999999999999999988765
No 128
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=93.69 E-value=0.029 Score=68.14 Aligned_cols=70 Identities=24% Similarity=0.216 Sum_probs=59.3
Q ss_pred HHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCc------ccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 005128 631 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPN------FRDARGRTALHWASYFGSWEQLRVRLRI 700 (713)
Q Consensus 631 Lle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN------~rD~~G~TPLH~Aa~~G~~eiV~lLL~~ 700 (713)
+.-.|..++.+|..|+||||+|+..|+..++..|++.|++.+ ..+..|.|+--.|...||..+..+|-+.
T Consensus 627 ~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 627 ISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred EeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 334577788999999999999999999999999998876544 3456799999999999999998887654
No 129
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=92.77 E-value=0.13 Score=58.45 Aligned_cols=61 Identities=23% Similarity=0.241 Sum_probs=51.1
Q ss_pred HHHHHHHhCCCCCC------cccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 005128 626 WLVWKIHEGGKGPN------VIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWAS 686 (713)
Q Consensus 626 wLvekLle~Gad~N------~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa 686 (713)
-.++-|.+++.+.| ..+..--|+||+||..|...+|..||..|+|+..+|..|.||..+++
T Consensus 405 ~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 405 DSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 34556666666654 34555789999999999999999999999999999999999999887
No 130
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=91.63 E-value=0.25 Score=57.06 Aligned_cols=58 Identities=22% Similarity=0.153 Sum_probs=45.7
Q ss_pred HHHHhCCHHHHHHHHHcCCC--Cc--ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccC
Q 005128 651 LAAALGYEWAMRPIIATGVS--PN--FRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEG 708 (713)
Q Consensus 651 lAA~lG~~~~V~lLL~~Gad--vN--~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~ 708 (713)
.|........+-+||.+|.. +| .-+..|+||||+||..|+..+..+|+=+|+|+..++
T Consensus 630 ~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rd 691 (749)
T KOG0705|consen 630 RAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARD 691 (749)
T ss_pred HHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecc
Confidence 34444445566788888753 33 356788999999999999999999999999998765
No 131
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=90.76 E-value=0.64 Score=51.55 Aligned_cols=61 Identities=21% Similarity=0.220 Sum_probs=49.5
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 688 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~ 688 (713)
-+..|++.|.++|.+|.-...||.+|+..||..+|++|++.||-.. +|...---.||++..
T Consensus 51 ~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~-rdtf~G~RC~YgaLn 111 (516)
T KOG0511|consen 51 RVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICS-RDTFDGDRCHYGALN 111 (516)
T ss_pred HHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccc-ccccCcchhhhhhhh
Confidence 4567888999999999999999999999999999999999998654 454433345666654
No 132
>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function.
Probab=90.58 E-value=0.76 Score=54.31 Aligned_cols=103 Identities=23% Similarity=0.423 Sum_probs=65.9
Q ss_pred CChHHHHHHHHcccccc-----cCCCCCCCCCCCceEe-ee--hhhhhhhhccccceeecCCCcchHhhhhhcccCCEee
Q 005128 27 LRPTEICEILRNYQKFH-----LTPDPPVRPPAGSLFL-FD--RKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSIDV 98 (713)
Q Consensus 27 l~~~ei~~il~~~~~~~-----~~~~~~~~p~~gs~~l-~~--r~~~~~fr~dg~~w~kkk~g~~~~e~h~~lk~~~~~~ 98 (713)
|..++|.++|..--+.- +.-.=-.+|+-|+||| |- -++.-.|-.|||.|..- |.--+..++|..
T Consensus 30 l~~~~~~~~Ll~ap~i~r~~~P~~WtylD~P~DGtv~L~wqp~~~lg~~fasDGy~wad~-------E~~y~~~~~G~~- 101 (669)
T PF08549_consen 30 LPPETVVEYLLKAPQIARDTAPFFWTYLDKPPDGTVLLTWQPLNRLGTNFASDGYVWADP-------EQAYTHEVNGYT- 101 (669)
T ss_pred CCHHHHHHHHHhchhhhccCCCeEeecccCCCCCcEEEEecCchhcCCcCCCCcceecCh-------hheeeecCCCeE-
Confidence 45566667775543221 1111146799999988 42 24557799999999741 444444555544
Q ss_pred EEEEeec------cccCccccceeeeeccCCC---------ceEEEEeeeeccC
Q 005128 99 LHCYYAH------GEDNENFQRRSYWMLDGQL---------EHIVLVHYREVKE 137 (713)
Q Consensus 99 ~~~~y~h------~~~~~~f~rr~y~~l~~~~---------~~ivlvhy~~~~~ 137 (713)
|-.||.. +|..-..-||-|-|+-... +.++||||..-..
T Consensus 102 lEi~~~k~G~~p~~e~~a~h~RrRyRL~~~~~p~pn~P~~DpsLwiVHY~~a~~ 155 (669)
T PF08549_consen 102 LEIYEHKSGYHPPGEQYASHSRRRYRLVPGKVPNPNAPPPDPSLWIVHYGPAPP 155 (669)
T ss_pred EEEEEeecCcCCCCCchhheeeeeeEecCCCCCCCCCCCCCCcEEEEEecCCCc
Confidence 3333333 5777789999999995432 5689999988665
No 133
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=87.83 E-value=0.21 Score=58.16 Aligned_cols=58 Identities=17% Similarity=0.227 Sum_probs=51.1
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCC-CCCceeEEEEEe
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITG 512 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~pG~V~l~Vt~ 512 (713)
.|.|+.|-.+...++++|+..|..++. ......+|..+...-++|| -.+|.|.|.++.
T Consensus 244 vprd~~~~Q~~i~~~~~v~~~g~n~~~---------------~als~~~~~~s~~~~~l~~~d~~~~v~~~i~~ 302 (605)
T KOG3836|consen 244 VPRDMRRFQVLINGGVEVTLLGANFKD---------------IALSTQCSEESTMVNYLPPSDNPGSVSVSITD 302 (605)
T ss_pred Cccccccccccccccceecccccchhh---------------hhhcccccccccceeeccccccCCCceeeecc
Confidence 689999999999999999999999854 3445678899999999988 999999999986
No 134
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=82.65 E-value=1.7 Score=49.91 Aligned_cols=51 Identities=20% Similarity=0.145 Sum_probs=43.4
Q ss_pred HHHHHHHHHcCCCCccc------CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccC
Q 005128 658 EWAMRPIIATGVSPNFR------DARGRTALHWASYFGSWEQLRVRLRIQHQHFLEG 708 (713)
Q Consensus 658 ~~~V~lLL~~GadvN~r------D~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~ 708 (713)
...|+.|.+.+++.|++ |..-.|+||+|+..|..+||..||+.|+|...++
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd 460 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKD 460 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcc
Confidence 45688899999998874 4446799999999999999999999999988754
No 135
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=72.00 E-value=4.4 Score=50.57 Aligned_cols=76 Identities=20% Similarity=0.145 Sum_probs=54.0
Q ss_pred CCceEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCe-ecceEeeecceeeeecCCCC--CceeEEEEE
Q 005128 436 EQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNVIRCQAPSHA--AGRVPFYIT 511 (713)
Q Consensus 436 ~qlfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpaei~q~GVLrC~~PPh~--pG~V~l~Vt 511 (713)
-+.++|++|+|.-++..|||.|+|.|.++...-+....+..+-=.-. .++.+..--..+.|..-++. ||.|.+.|-
T Consensus 47 c~~P~i~~~~P~~g~~eggt~iti~g~nlg~~~~dv~~~v~Va~v~c~~~~~~y~~~~~i~C~~~~~~~~~g~v~~~v~ 125 (1025)
T KOG3610|consen 47 CPLPSITALSPLNGPIEGGTNISIVGTNLGNSLNDVSDGVKVAGVRCSPVAEEYDCSPCIACSPGANGSWPGPINVAVG 125 (1025)
T ss_pred cCCCcccceeeccccccCCceeeeeeeehhhhhhhccCCceEeeeecCCCccccccccceeeccCCCCCCCCceeEEec
Confidence 45678999999999999999999999998652221112222211111 44556667778899888876 799998887
No 136
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=68.89 E-value=3.6 Score=48.33 Aligned_cols=37 Identities=16% Similarity=0.081 Sum_probs=33.7
Q ss_pred eEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCe
Q 005128 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI 482 (713)
Q Consensus 439 fsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~ 482 (713)
.-|..|+|+-+..-+|+.|.|+|-.+.. ++.|.||.+
T Consensus 323 ~~i~~yvp~t~~q~~~~al~ivg~n~~~-------~l~~a~~~~ 359 (605)
T KOG3836|consen 323 KAIFTYVPSTDRQLIEYALQIVGLNMNG-------KLEDARNIA 359 (605)
T ss_pred ccceeeecCCCceeeeeEEEEecccccC-------chhhhcCCc
Confidence 4699999999999999999999998844 889999998
No 137
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=58.96 E-value=16 Score=38.50 Aligned_cols=47 Identities=21% Similarity=0.140 Sum_probs=39.8
Q ss_pred CHHHHHHHHHcC-CCCcc---cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 657 YEWAMRPIIATG-VSPNF---RDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 657 ~~~~V~lLL~~G-advN~---rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
...+++.++..| +++|. +-+.|-|-|.-|..++..+++++||++||-
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 345677888887 57776 567899999999999999999999999994
No 138
>PF14545 DBB: Dof, BCAP, and BANK (DBB) motif,
Probab=50.35 E-value=67 Score=31.55 Aligned_cols=70 Identities=20% Similarity=0.168 Sum_probs=52.1
Q ss_pred ecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCe-----ecceEeeecceeeeecCCC---CCceeEEEEEeCCc
Q 005128 444 FSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-----EVPAEVLTDNVIRCQAPSH---AAGRVPFYITGSNR 515 (713)
Q Consensus 444 ~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-----eVpaei~q~GVLrC~~PPh---~pG~V~l~Vt~~n~ 515 (713)
+.|+.=.++.. ||.|+=.---. ......|.|-.. .+++.+|-+-|++..+|-. -+|.|.+.|.|++-
T Consensus 3 V~P~rI~cg~~-~vfIiL~~~l~----~~~~~eVef~~~n~~~~~~~~~~~N~yt~~~~aPd~~~~pag~V~v~v~~~g~ 77 (142)
T PF14545_consen 3 VQPSRIRCGQP-EVFIILRDPLD----EEDTVEVEFESNNKPIRRVPAKWENPYTLQFKAPDFCLEPAGSVNVRVYCDGV 77 (142)
T ss_pred ecCceeecCCC-EEEEEEeCCCC----CCCeEEEEEEeCCCeeEeccceEECCEEEEEECchhcCCCCceEEEEEEECCE
Confidence 45666777777 88877543211 134677777432 5789999999999999999 99999999999996
Q ss_pred ccc
Q 005128 516 LAC 518 (713)
Q Consensus 516 ~~c 518 (713)
..|
T Consensus 78 ~~~ 80 (142)
T PF14545_consen 78 SLG 80 (142)
T ss_pred EEE
Confidence 654
No 139
>PF12728 HTH_17: Helix-turn-helix domain
Probab=44.30 E-value=17 Score=28.37 Aligned_cols=42 Identities=14% Similarity=0.136 Sum_probs=26.3
Q ss_pred hCChHHHHHHHHccc-cc--ccCCCCCCCCCCCceEeeehhhhhh
Q 005128 26 WLRPTEICEILRNYQ-KF--HLTPDPPVRPPAGSLFLFDRKALRY 67 (713)
Q Consensus 26 wl~~~ei~~il~~~~-~~--~~~~~~~~~p~~gs~~l~~r~~~~~ 67 (713)
||+++|+|++|.--. .+ .+.....+....|.-++|++..+.-
T Consensus 1 ~lt~~e~a~~l~is~~tv~~~~~~g~i~~~~~g~~~~~~~~~l~~ 45 (51)
T PF12728_consen 1 YLTVKEAAELLGISRSTVYRWIRQGKIPPFKIGRKWRIPKSDLDR 45 (51)
T ss_pred CCCHHHHHHHHCcCHHHHHHHHHcCCCCeEEeCCEEEEeHHHHHH
Confidence 789999999994332 22 2333322222377779999888743
No 140
>PF05587 Anth_Ig: Anthrax receptor extracellular domain; InterPro: IPR008400 Anthrax is an acute disease in humans and animals caused by the bacterium Bacillus anthracis, which can be lethal. There are effective vaccines against anthrax, and some forms of the disease respond well to antibiotic treatment. The anthrax bacillus is one of only a few that can form long-lived spores. The anthrax toxin consists of the proteins protective antigen (PA) lethal factor (LF) and oedema factor (EF). The first step of toxin entry into host cells is the recognition by PA of a receptor on the surface of the target cell. The subsequent cleavage of receptor-bound PA enables EF and LF to bind and form a heptameric PA63 pre-pore, which triggers endocytosis. PA has been shown to bind to two cellular receptors: anthrax toxin receptor/tumour endothelial marker 8 and capillary morphogenesis protein 2 (CMG2), which are closely related host cell receptors. Both bind to PA with high affinity and are capable of mediating toxicity [, ], and both are type 1 membrane proteins that include an approximately 200-aa extracellular von Willebrand factor A (VWA) domain with a metal ion-dependent adhesion site (MIDAS) motif []. This region is found in the putatively extracellular N-terminal half of the anthrax receptor. It is probably part of the Ig superfamily and most closely related to IPR002909 from INTERPRO.; GO: 0004872 receptor activity, 0016021 integral to membrane; PDB: 3N2N_E 1SHT_X 1TZN_o 1SHU_X.
Probab=40.45 E-value=9.3 Score=35.59 Aligned_cols=74 Identities=20% Similarity=0.330 Sum_probs=0.0
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEe--CCe----ecceEeeecceeeeecCC-CCCce-eEEEEE
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMF--GEI----EVPAEVLTDNVIRCQAPS-HAAGR-VPFYIT 511 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmF--Gd~----eVpaei~q~GVLrC~~PP-h~pG~-V~l~Vt 511 (713)
.|..+-|+---+++.-.|.|.|.+|..... ...-.|-| .+. +=|+ .+++..|.|-+|- +.||. +.++|+
T Consensus 7 Eil~~ePSsvC~ge~f~Vvv~G~GF~~~~~--~d~ViC~F~~n~t~~~~~KP~-~v~dt~llCPaP~l~~~G~~~~v~VS 83 (105)
T PF05587_consen 7 EILSVEPSSVCVGESFQVVVRGNGFNNARN--VDQVICRFKFNDTKTVDEKPV-SVEDTYLLCPAPVLEEPGQTIFVEVS 83 (105)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEcCCceECCCceEEEEECccccccCC--CCeEEEEEEECCeeEEEeCCc-EEcCCEEECCCccccCCCCEEEEEEE
Confidence 577788888889999999999998866443 22445555 432 2254 7899999999988 99996 456777
Q ss_pred eCCcc
Q 005128 512 GSNRL 516 (713)
Q Consensus 512 ~~n~~ 516 (713)
..|+.
T Consensus 84 lNnG~ 88 (105)
T PF05587_consen 84 LNNGK 88 (105)
T ss_dssp -----
T ss_pred EcCCE
Confidence 76665
No 141
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=39.60 E-value=45 Score=34.23 Aligned_cols=46 Identities=20% Similarity=0.103 Sum_probs=40.8
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005128 648 VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLR 699 (713)
Q Consensus 648 pLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~ 699 (713)
-|..||..|....+--.++.|-+++. ++|..|+.++|.+++..++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 47789999999999889999998874 89999999999999988764
No 142
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=38.59 E-value=14 Score=44.95 Aligned_cols=84 Identities=19% Similarity=0.014 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC----CCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 005128 612 DKLIQNLLRNRLCEWLVWKIHEGG----KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY 687 (713)
Q Consensus 612 d~LLq~lLk~kl~ewLvekLle~G----ad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~ 687 (713)
+..+..+.++.. ..+.+.++.. .++|.+|.-|+++||+|..+-+.+++++|+.++..+ --||-+|..
T Consensus 27 ~~fL~a~E~gd~--~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~ 97 (822)
T KOG3609|consen 27 KGFLLAHENGDV--PLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIA 97 (822)
T ss_pred HHHHHHHHcCCh--HHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHH
Confidence 344444444432 3556666532 467889999999999999999999999999988776 248999999
Q ss_pred cCCHHHHHHHHHcCCCc
Q 005128 688 FGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 688 ~G~~eiV~lLL~~GADi 704 (713)
.|..++|++|+.+-...
T Consensus 98 ~~~v~~VE~ll~~~~~~ 114 (822)
T KOG3609|consen 98 VGSVPLVELLLVHFVDA 114 (822)
T ss_pred HHHHHHHHHHHhccccc
Confidence 99999999999876554
No 143
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif. The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.
Probab=38.56 E-value=14 Score=30.94 Aligned_cols=8 Identities=75% Similarity=1.514 Sum_probs=5.6
Q ss_pred ccccceee
Q 005128 70 KDGHRWRK 77 (713)
Q Consensus 70 ~dg~~w~k 77 (713)
.|||.|||
T Consensus 2 ~Dgy~WRK 9 (60)
T PF03106_consen 2 DDGYRWRK 9 (60)
T ss_dssp -SSS-EEE
T ss_pred CCCCchhh
Confidence 49999998
No 144
>TIGR03437 Soli_cterm Solibacter uncharacterized C-terminal domain. This model describes a protein domain found in 90 proteins of Solibacter usitatus Ellin6076, nearly always as the C-terminal domain of a much larger protein. No homologs to this domain are detected outside of S. usitatus, a member of the Acidobacteria.
Probab=34.07 E-value=1.3e+02 Score=31.49 Aligned_cols=64 Identities=19% Similarity=0.162 Sum_probs=50.3
Q ss_pred CCeEEEEEeccccCCC--------CCCCCceEEEeCCeecceEeeecceeeeecCC-CCCceeEEEEEeCCcc
Q 005128 453 AETKVLIIGMFLGTKK--------LSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRL 516 (713)
Q Consensus 453 ggtKVlI~G~f~~~~~--------~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~pG~V~l~Vt~~n~~ 516 (713)
-|.=|+|-|.+|.... ...-.+-++.|+++.+|-.+++++-+.|.+|. -.+|.+.+.|+..+..
T Consensus 4 PG~~vsIfG~~L~~~t~~~~~~plpt~l~Gv~V~vnG~~APl~yvSp~QIN~qvP~~~~~g~~~v~V~~~g~~ 76 (215)
T TIGR03437 4 PGSIVSIFGTNLAPATLTAAGGPLPTSLGGVSVTVNGVAAPLLYVSPGQINAQVPYEVAPGAATVTVTYNGGA 76 (215)
T ss_pred CCcEEEEEeccCCCccccccCCCCccccCCeEEEECCEEEEEEEeCcceEEEEeCCCcCCCcEEEEEEeCCcc
Confidence 4566888888886421 12235788999999999999999999999998 5689999999875543
No 145
>PF09099 Qn_am_d_aIII: Quinohemoprotein amine dehydrogenase, alpha subunit domain III; InterPro: IPR015183 This domain is predominantly found in the prokaryotic protein quinohemoprotein amine dehydrogenase, adopting an immunoglobulin-like beta-sandwich fold, with seven strands arranged into two beta sheets; the fold is possibly related to the immunoglobulin and/or fibronectin type III superfamilies. The precise function of this domain has not, as yet, been defined []. ; PDB: 1JMZ_A 1JMX_A 1PBY_A 1JJU_A.
Probab=30.98 E-value=1.6e+02 Score=26.19 Aligned_cols=63 Identities=27% Similarity=0.259 Sum_probs=38.7
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCe-ecceEe-eecceeee--ecCC-CCCceeEEEEE
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEV-LTDNVIRC--QAPS-HAAGRVPFYIT 511 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpaei-~q~GVLrC--~~PP-h~pG~V~l~Vt 511 (713)
.|.-++|.---..++++|+|.|..|.. .++||.= +|-.-. -.++-++- .+.. ..||.+++.|.
T Consensus 3 ~i~aV~P~~lkaG~~t~vti~Gt~L~~---------~v~l~~Gv~v~~v~~~s~~~v~v~V~~aa~a~~G~~~v~vg 70 (81)
T PF09099_consen 3 TILAVSPAGLKAGEETTVTIVGTGLAG---------TVDLGPGVEVLKVVSASPDEVVVRVKAAADAAPGIRTVRVG 70 (81)
T ss_dssp EEEEEESSEEETTCEEEEEEEEES-TT----------EE--TTEEEEEEEEE-STCEEEEEEEECTSSSEEEEEEET
T ss_pred eEEEECchhccCCCeEEEEEEecCccc---------ceecCCCeEEEEEEEeCCCEEEEEEEEcCCCCCccEEEEec
Confidence 689999999999999999999999933 2666653 343222 33333332 4444 56677776553
No 146
>smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
Probab=29.92 E-value=19 Score=30.12 Aligned_cols=8 Identities=63% Similarity=1.381 Sum_probs=7.0
Q ss_pred ccccceee
Q 005128 70 KDGHRWRK 77 (713)
Q Consensus 70 ~dg~~w~k 77 (713)
.|||.|||
T Consensus 2 ~DGy~WRK 9 (59)
T smart00774 2 DDGYQWRK 9 (59)
T ss_pred CCcccccc
Confidence 59999987
No 147
>KOG3743 consensus Recombination signal binding protein-J kappa(CBF1, Su(H), HS2NF5) [Transcription]
Probab=27.24 E-value=48 Score=38.82 Aligned_cols=44 Identities=16% Similarity=0.295 Sum_probs=36.4
Q ss_pred CCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCCCCC
Q 005128 453 AETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAA 503 (713)
Q Consensus 453 ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PPh~p 503 (713)
.-+-+.+.|.+|.. ++.+.||++|++|.+-..-+|.|.+|.=.+
T Consensus 506 d~amlel~g~nf~p-------~l~vwfg~~e~et~~r~~~sl~c~Vp~vs~ 549 (622)
T KOG3743|consen 506 DVAMLELHGQNFVP-------NLQVWFGDVEAETYYRSGESLQCVVPDVSA 549 (622)
T ss_pred ceeEEEecCCCCCC-------CceeeccccCchhhhcccceEEEEeCChhh
Confidence 44567778999855 899999999999999888899999998433
No 148
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=24.37 E-value=32 Score=40.42 Aligned_cols=116 Identities=29% Similarity=0.429 Sum_probs=72.0
Q ss_pred CCCCcccHHHHHHHHHHhhCChHH-HHHHHHcccc-------cccCCCCC-CCCCCCc---eEeee-hhhhhhhhcccc-
Q 005128 8 VPNQQLDLEQILQEAQYRWLRPTE-ICEILRNYQK-------FHLTPDPP-VRPPAGS---LFLFD-RKALRYFRKDGH- 73 (713)
Q Consensus 8 ~~~~~l~~~~~~~~~~~rwl~~~e-i~~il~~~~~-------~~~~~~~~-~~p~~gs---~~l~~-r~~~~~fr~dg~- 73 (713)
|...|+||.. -.. -+|+| +..||.||-. ..|++.-| -.-..|| .+||| |++++-||-||-
T Consensus 170 GtirQyDiRE----ph~--c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~ 243 (758)
T KOG1310|consen 170 GTIRQYDIRE----PHV--CNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTM 243 (758)
T ss_pred cceeeecccC----Ccc--CCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccc
Confidence 3445666643 111 25666 8888888852 23444422 2334666 68999 999999999986
Q ss_pred ceeecCCCcchHh---hhhhcccCCEeeEE--EEeeccccCccccceeeeeccCCCceEEEEeeee
Q 005128 74 RWRKKKDGKTVKE---AHEKLKAGSIDVLH--CYYAHGEDNENFQRRSYWMLDGQLEHIVLVHYRE 134 (713)
Q Consensus 74 ~w~kkk~g~~~~e---~h~~lk~~~~~~~~--~~y~h~~~~~~f~rr~y~~l~~~~~~ivlvhy~~ 134 (713)
+--.-||-+-|+- .|.|..-|+.+..+ |-|+--.=|- .==|+.=.-||++|.|--+
T Consensus 244 ~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpNG-----tElLvs~~gEhVYlfdvn~ 304 (758)
T KOG1310|consen 244 NTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFNPNG-----TELLVSWGGEHVYLFDVNE 304 (758)
T ss_pred cCCCCcccchhheecCccccCcccccccceeeeEEEEECCCC-----cEEEEeeCCeEEEEEeecC
Confidence 6666777777764 47777778888888 7776532221 0113333457888876433
No 149
>PF01913 FTR: Formylmethanofuran-tetrahydromethanopterin formyltransferase; InterPro: IPR022667 Formylmethanofuran:tetrahyromethanopterin formyltransferase (Ftr) is involved in C1 metabolism in methanogenic archaea, sulphate-reducing archaea and methylotrophic bacteria. It catalyses the following reversible reaction: N-formylmethanofuran + 5,6,7,8-tetrahydromethanopterin = methanofuran + 5-formyl-5,6,7,8-tetrahydromethanopterin Ftr from the thermophilic methanogen Methanopyrus kandleri (optimum growth temperature 98 degrees C) is a hyperthermophilic enzyme that is absolutely dependent on the presence of lyotropic salts for activity and thermostability. The crystal structure of Ftr, determined to a reveals a homotetramer composed essentially of two dimers. Each subunit is subdivided into two tightly associated lobes both consisting of a predominantly antiparallel beta sheet flanked by alpha helices forming an alpha/beta sandwich structure. The approximate location of the active site was detected in a region close to the dimer interface []. Ftr from the mesophilic methanogen Methanosarcina barkeri and the sulphate-reducing archaeon Archaeoglobus fulgidus have a similar structure []. In the methylotrophic bacterium Methylobacterium extorquens, Ftr interacts with three other polypeptides to form an Ftr/cyclohydrolase complex which catalyses the hydrolysis of formyl-tetrahydromethanopterin to formate during growth on C1 substrates [].; GO: 0016740 transferase activity, 0006730 one-carbon metabolic process; PDB: 1M5H_E 1M5S_C 1FTR_C 2FHJ_B 2FHK_D.
Probab=24.35 E-value=36 Score=33.39 Aligned_cols=20 Identities=40% Similarity=0.710 Sum_probs=14.5
Q ss_pred hhhhhhhccccceeecCCCcc
Q 005128 63 KALRYFRKDGHRWRKKKDGKT 83 (713)
Q Consensus 63 ~~~~~fr~dg~~w~kkk~g~~ 83 (713)
+.|||| -|||.|.|+-+||.
T Consensus 119 ~~lr~F-GDG~q~sk~~~grr 138 (144)
T PF01913_consen 119 KKLRFF-GDGYQISKEIGGRR 138 (144)
T ss_dssp HHHHGG-GTT--EEEEETTEE
T ss_pred ccccCc-cCCceEEEEECCEE
Confidence 457886 69999999999963
No 150
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=20.05 E-value=1.7e+02 Score=25.01 Aligned_cols=47 Identities=13% Similarity=0.019 Sum_probs=38.0
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 005128 647 GVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRI 700 (713)
Q Consensus 647 TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~ 700 (713)
..|..|...|..++++.++..+ .++ ...|..|....+-+++..|+..
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 4578999999999999988754 222 3469999999999999999864
Done!