Query 005128
Match_columns 713
No_of_seqs 356 out of 1720
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 16:12:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005128.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005128hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cxk_A Camta1, calmodulin bind 99.9 1.2E-26 4.2E-31 206.7 9.4 88 438-531 6-93 (95)
2 1n0q_A 3ANK, 3 ankyrin repeats 99.6 2E-14 6.8E-19 122.9 11.7 78 626-703 16-93 (93)
3 3aaa_C Myotrophin, protein V-1 99.5 4.5E-14 1.6E-18 126.3 12.1 84 626-709 21-104 (123)
4 4gpm_A Engineered protein OR26 99.5 3.4E-14 1.1E-18 136.9 11.7 83 625-707 83-165 (169)
5 4gpm_A Engineered protein OR26 99.5 8.8E-14 3E-18 134.0 12.7 85 625-709 50-134 (169)
6 2jab_A H10-2-G3; HER2, darpin, 99.5 2.8E-13 9.7E-18 123.4 12.8 84 626-709 28-111 (136)
7 3c5r_A BARD-1, BRCA1-associate 99.5 2.7E-13 9.3E-18 123.2 11.5 84 626-709 24-107 (137)
8 4b93_B Ankyrin repeat domain-c 99.4 2.7E-13 9.2E-18 139.3 10.5 84 626-709 133-216 (269)
9 3twr_A Tankyrase-2; ankyrin re 99.4 7.3E-13 2.5E-17 123.6 12.2 84 626-709 56-139 (165)
10 1ycs_B 53BP2, P53BP2; ankyrin 99.4 4.8E-13 1.6E-17 133.7 11.5 83 626-708 51-133 (239)
11 1d9s_A Cyclin-dependent kinase 99.4 2.2E-13 7.6E-18 124.1 7.6 80 627-707 27-107 (136)
12 3f6q_A Integrin-linked protein 99.4 1E-12 3.4E-17 124.8 12.3 84 626-709 53-136 (179)
13 1bi7_B P16INK4A, MTS1, multipl 99.4 3.5E-13 1.2E-17 125.6 8.9 83 627-709 59-142 (156)
14 1awc_B Protein (GA binding pro 99.4 1.1E-12 3.6E-17 121.5 12.1 84 626-709 48-131 (153)
15 2l6b_A NR1C; ankyrin, consensu 99.4 1.9E-13 6.7E-18 120.5 6.7 84 626-709 23-106 (115)
16 3deo_A Signal recognition part 99.4 1E-12 3.4E-17 125.9 11.6 94 614-709 47-141 (183)
17 3ehr_A Osteoclast-stimulating 99.4 8.3E-13 2.8E-17 129.6 11.2 84 626-709 87-171 (222)
18 1d9s_A Cyclin-dependent kinase 99.4 5.8E-13 2E-17 121.3 8.9 77 627-703 59-136 (136)
19 3v30_A DNA-binding protein rfx 99.4 1.7E-12 5.8E-17 122.0 11.4 82 627-708 51-132 (172)
20 2y1l_E Darpin-8.4; hydrolase-i 99.4 2.9E-12 9.8E-17 120.8 12.2 84 626-709 61-144 (169)
21 3ui2_A Signal recognition part 99.4 1.5E-12 5.3E-17 131.0 10.9 83 626-709 59-142 (244)
22 1bd8_A P19INK4D CDK4/6 inhibit 99.4 2E-12 6.9E-17 119.3 10.7 82 627-709 50-131 (156)
23 3v31_A Ankyrin repeat family A 99.4 2.9E-12 9.9E-17 119.8 11.8 83 627-709 51-133 (167)
24 2vge_A RELA-associated inhibit 99.4 2.4E-12 8.2E-17 129.0 11.8 95 613-708 23-117 (229)
25 1oy3_D Transcription factor in 99.4 2.2E-12 7.4E-17 129.2 11.2 85 625-709 171-256 (282)
26 2y1l_E Darpin-8.4; hydrolase-i 99.4 5.1E-12 1.8E-16 119.0 12.9 84 626-709 28-111 (169)
27 1n0r_A 4ANK, 4 ankyrin repeats 99.4 4.3E-12 1.5E-16 111.6 11.6 78 626-703 49-126 (126)
28 1n0r_A 4ANK, 4 ankyrin repeats 99.3 4.8E-12 1.7E-16 111.3 11.8 84 626-709 16-99 (126)
29 1ihb_A P18-INK4C(INK6), cyclin 99.3 3.1E-12 1.1E-16 118.5 11.0 78 626-703 84-162 (162)
30 1n0q_A 3ANK, 3 ankyrin repeats 99.3 2.2E-12 7.4E-17 110.2 8.8 66 644-709 1-66 (93)
31 2rfm_A Putative ankyrin repeat 99.3 3.7E-12 1.3E-16 122.0 11.5 84 626-709 82-165 (192)
32 1bi7_B P16INK4A, MTS1, multipl 99.3 1.2E-12 4.3E-17 121.9 7.7 83 626-709 26-109 (156)
33 1ihb_A P18-INK4C(INK6), cyclin 99.3 4.5E-12 1.6E-16 117.4 11.1 82 627-708 52-134 (162)
34 2jab_A H10-2-G3; HER2, darpin, 99.3 6.3E-12 2.1E-16 114.5 11.5 76 626-701 61-136 (136)
35 1s70_B 130 kDa myosin-binding 99.3 6.7E-12 2.3E-16 127.5 12.2 96 613-709 42-137 (299)
36 2zgd_A 3 repeat synthetic anky 99.3 8.9E-12 3E-16 110.2 11.3 84 613-697 26-109 (110)
37 3utm_A Tankyrase-1; tankyrase, 99.3 6.1E-12 2.1E-16 129.4 11.7 84 626-709 228-311 (351)
38 1yyh_A HN1;, notch 1, ankyrin 99.3 5.9E-12 2E-16 126.2 11.1 84 626-709 138-221 (253)
39 4g8k_A 2-5A-dependent ribonucl 99.3 4E-12 1.4E-16 132.3 10.2 82 627-708 221-303 (337)
40 2dzn_A Probable 26S proteasome 99.3 9E-12 3.1E-16 121.3 11.6 84 626-709 121-206 (228)
41 1dcq_A PYK2-associated protein 99.3 3.8E-12 1.3E-16 131.6 9.3 81 625-705 185-265 (278)
42 3v31_A Ankyrin repeat family A 99.3 9.5E-12 3.2E-16 116.3 10.9 83 627-709 18-100 (167)
43 1k1a_A B-cell lymphoma 3-encod 99.3 1.2E-11 4E-16 121.2 12.1 85 625-709 129-214 (241)
44 1awc_B Protein (GA binding pro 99.3 1.5E-11 5E-16 113.8 12.0 83 626-709 16-98 (153)
45 2f8y_A Notch homolog 1, transl 99.3 1.4E-11 4.9E-16 119.7 12.2 82 627-708 107-188 (223)
46 1wdy_A 2-5A-dependent ribonucl 99.3 1E-11 3.6E-16 123.6 11.5 84 626-709 200-284 (285)
47 3lvq_E ARF-GAP with SH3 domain 99.3 7.7E-12 2.6E-16 139.3 11.6 79 627-705 189-267 (497)
48 3f6q_A Integrin-linked protein 99.3 1.6E-11 5.4E-16 116.5 12.2 83 627-709 20-103 (179)
49 3twr_A Tankyrase-2; ankyrin re 99.3 2E-11 6.8E-16 113.9 11.7 83 627-709 23-106 (165)
50 1dcq_A PYK2-associated protein 99.3 1.5E-11 5E-16 127.2 11.6 83 627-709 145-236 (278)
51 3aji_A 26S proteasome non-ATPa 99.3 1.6E-11 5.6E-16 119.9 11.4 84 626-709 120-203 (231)
52 3c5r_A BARD-1, BRCA1-associate 99.3 1.2E-11 4E-16 112.4 9.6 74 635-709 1-74 (137)
53 3lvq_E ARF-GAP with SH3 domain 99.3 6.1E-12 2.1E-16 140.1 9.1 98 612-709 134-238 (497)
54 3t8k_A Uncharacterized protein 99.3 2.4E-12 8.3E-17 125.6 5.1 83 627-709 57-152 (186)
55 2rfm_A Putative ankyrin repeat 99.3 9.4E-12 3.2E-16 119.2 9.1 83 627-709 50-132 (192)
56 4hbd_A KN motif and ankyrin re 99.3 1.3E-11 4.6E-16 126.4 10.8 84 626-709 164-248 (276)
57 3v30_A DNA-binding protein rfx 99.3 9.7E-12 3.3E-16 116.8 8.9 83 626-708 83-165 (172)
58 2b0o_E UPLC1; arfgap, structur 99.2 1.9E-11 6.4E-16 128.0 11.3 81 628-708 167-256 (301)
59 3b7b_A Euchromatic histone-lys 99.2 2.3E-11 7.8E-16 119.4 10.9 84 626-709 125-208 (237)
60 3jxi_A Vanilloid receptor-rela 99.2 1.4E-11 4.9E-16 123.0 9.3 80 625-704 106-211 (260)
61 2xai_A ASB-9, ankyrin repeat a 99.2 3.4E-11 1.2E-15 121.5 12.0 79 627-706 51-129 (261)
62 2etb_A Transient receptor pote 99.2 1.6E-11 5.3E-16 122.7 9.5 80 625-704 103-207 (256)
63 3utm_A Tankyrase-1; tankyrase, 99.2 4.1E-11 1.4E-15 123.2 12.3 93 615-708 62-154 (351)
64 3jue_A Arfgap with coiled-coil 99.2 3E-11 1E-15 130.8 11.6 75 627-701 250-324 (368)
65 1n11_A Ankyrin; clathrin, BAND 99.2 2.8E-11 9.6E-16 130.2 10.9 84 626-709 292-375 (437)
66 3ljn_A Hypothetical protein; a 99.2 1.6E-11 5.6E-16 129.1 8.8 81 627-707 155-240 (364)
67 1bd8_A P19INK4D CDK4/6 inhibit 99.2 6.1E-11 2.1E-15 109.3 11.4 82 627-709 17-99 (156)
68 2zgd_A 3 repeat synthetic anky 99.2 2.1E-11 7.2E-16 107.7 7.6 72 638-709 17-88 (110)
69 2xai_A ASB-9, ankyrin repeat a 99.2 3.5E-11 1.2E-15 121.3 10.2 83 626-709 115-197 (261)
70 1ikn_D Protein (I-kappa-B-alph 99.2 5.3E-11 1.8E-15 117.4 11.2 80 626-705 131-211 (236)
71 2rfa_A Transient receptor pote 99.2 4.7E-11 1.6E-15 117.0 10.7 84 626-709 17-106 (232)
72 2rfa_A Transient receptor pote 99.2 7E-11 2.4E-15 115.7 11.8 80 626-705 89-185 (232)
73 3aji_A 26S proteasome non-ATPa 99.2 8.6E-11 2.9E-15 114.8 12.3 84 626-709 87-170 (231)
74 2b0o_E UPLC1; arfgap, structur 99.2 1.7E-11 5.9E-16 128.2 7.8 78 626-703 207-284 (301)
75 1wdy_A 2-5A-dependent ribonucl 99.2 9.4E-11 3.2E-15 116.6 12.6 94 614-708 42-135 (285)
76 2dzn_A Probable 26S proteasome 99.2 8E-11 2.7E-15 114.5 11.8 84 626-709 86-172 (228)
77 1ikn_D Protein (I-kappa-B-alph 99.2 1.9E-11 6.6E-16 120.5 7.1 83 627-709 93-182 (236)
78 3muj_A Transcription factor CO 99.2 6.3E-11 2.1E-15 110.6 9.9 84 439-529 6-91 (138)
79 1yyh_A HN1;, notch 1, ankyrin 99.2 7.2E-11 2.5E-15 118.3 10.9 84 626-709 104-188 (253)
80 2pnn_A Transient receptor pote 99.2 3.8E-11 1.3E-15 121.2 8.9 81 625-705 114-220 (273)
81 4b93_B Ankyrin repeat domain-c 99.2 6E-11 2.1E-15 121.8 10.2 84 626-709 100-183 (269)
82 4g8k_A 2-5A-dependent ribonucl 99.2 1.1E-10 3.7E-15 121.5 12.1 96 613-709 27-156 (337)
83 3d9h_A CDNA FLJ77766, highly s 99.2 1.1E-10 3.8E-15 119.8 11.9 79 627-705 74-152 (285)
84 2f8y_A Notch homolog 1, transl 99.2 1.4E-10 4.8E-15 112.7 11.9 80 626-705 139-218 (223)
85 3hra_A Ankyrin repeat family p 99.2 1.3E-10 4.5E-15 111.0 11.5 84 626-709 86-176 (201)
86 3d9h_A CDNA FLJ77766, highly s 99.2 1.1E-10 3.7E-15 119.8 11.6 83 626-709 171-253 (285)
87 3t8k_A Uncharacterized protein 99.2 3.7E-11 1.3E-15 117.2 7.6 73 637-709 29-112 (186)
88 4hbd_A KN motif and ankyrin re 99.2 8.5E-11 2.9E-15 120.4 10.5 76 626-701 197-273 (276)
89 2l6b_A NR1C; ankyrin, consensu 99.2 3.4E-11 1.2E-15 106.0 6.5 70 640-709 4-73 (115)
90 3kea_A K1L; tropism, ANK repea 99.2 4.4E-11 1.5E-15 122.9 8.3 79 626-704 76-155 (285)
91 2vge_A RELA-associated inhibit 99.2 1.8E-11 6E-16 122.7 5.1 83 626-708 68-153 (229)
92 1oy3_D Transcription factor in 99.1 8.8E-11 3E-15 117.4 10.2 77 633-709 146-223 (282)
93 2etb_A Transient receptor pote 99.1 4.8E-11 1.6E-15 119.1 8.2 69 641-709 86-170 (256)
94 2pnn_A Transient receptor pote 99.1 3.5E-11 1.2E-15 121.5 7.2 82 625-706 161-262 (273)
95 3hra_A Ankyrin repeat family p 99.1 1.7E-10 5.8E-15 110.3 11.4 95 614-709 42-138 (201)
96 1n11_A Ankyrin; clathrin, BAND 99.1 1.3E-10 4.3E-15 125.1 11.6 79 627-705 62-140 (437)
97 3ljn_A Hypothetical protein; a 99.1 4.8E-11 1.6E-15 125.5 7.5 82 625-706 186-272 (364)
98 3jxi_A Vanilloid receptor-rela 99.1 9.5E-11 3.2E-15 117.0 8.8 74 636-709 84-174 (260)
99 1s70_B 130 kDa myosin-binding 99.1 2.4E-10 8.2E-15 116.0 12.0 76 634-709 188-263 (299)
100 1ycs_B 53BP2, P53BP2; ankyrin 99.1 4.1E-11 1.4E-15 119.7 5.7 82 626-707 84-168 (239)
101 1k1a_A B-cell lymphoma 3-encod 99.1 3.8E-10 1.3E-14 110.4 11.9 83 626-708 60-146 (241)
102 1sw6_A Regulatory protein SWI6 99.1 6.7E-11 2.3E-15 124.1 6.8 83 626-708 111-198 (327)
103 3b7b_A Euchromatic histone-lys 99.1 4.4E-10 1.5E-14 110.2 11.9 95 614-709 47-142 (237)
104 3ehr_A Osteoclast-stimulating 99.1 5.1E-11 1.7E-15 116.8 5.0 83 626-708 120-203 (222)
105 2fo1_E LIN-12 protein; beta-ba 99.1 2E-10 6.8E-15 122.5 9.7 77 627-703 294-371 (373)
106 3kea_A K1L; tropism, ANK repea 99.1 2.2E-10 7.4E-15 117.7 8.7 83 626-709 109-192 (285)
107 2fo1_E LIN-12 protein; beta-ba 99.1 3.1E-10 1.1E-14 121.0 9.7 72 638-709 272-344 (373)
108 3jue_A Arfgap with coiled-coil 99.1 3.9E-10 1.3E-14 122.1 10.5 84 626-709 214-299 (368)
109 3aaa_C Myotrophin, protein V-1 99.0 2.8E-10 9.7E-15 101.5 7.7 69 641-709 3-71 (123)
110 3eu9_A Huntingtin-interacting 99.0 1.1E-09 3.7E-14 106.4 11.5 95 614-709 45-140 (240)
111 1sw6_A Regulatory protein SWI6 99.0 2E-10 6.8E-15 120.5 6.6 74 636-709 192-314 (327)
112 3ui2_A Signal recognition part 99.0 3.2E-10 1.1E-14 114.1 7.6 78 626-703 91-185 (244)
113 3eu9_A Huntingtin-interacting 99.0 2E-09 6.8E-14 104.5 12.1 96 613-709 78-174 (240)
114 3deo_A Signal recognition part 99.0 1.2E-09 4E-14 104.5 8.9 66 626-691 90-156 (183)
115 3mlp_A Transcription factor CO 98.8 1.1E-08 3.6E-13 107.9 11.4 88 438-532 231-320 (402)
116 2aja_A Ankyrin repeat family p 98.5 9E-09 3.1E-13 111.6 -0.8 74 627-701 143-222 (376)
117 2aja_A Ankyrin repeat family p 98.5 4.8E-08 1.6E-12 105.9 3.5 80 626-706 106-191 (376)
118 1uad_C RSEC5, exocyst complex 98.2 7.3E-06 2.5E-10 73.1 9.5 84 438-529 7-95 (99)
119 3tc9_A Hypothetical hydrolase; 98.0 1.3E-05 4.5E-10 87.7 10.4 86 437-529 16-106 (430)
120 3hrp_A Uncharacterized protein 97.8 4.1E-05 1.4E-09 83.1 9.8 86 437-529 16-105 (409)
121 3kya_A Putative phosphatase; s 97.8 4E-05 1.4E-09 86.2 9.2 86 437-529 16-104 (496)
122 2uzx_B Hepatocyte growth facto 97.5 8.9E-05 3E-09 87.1 7.4 94 438-531 541-638 (727)
123 4hw6_A Hypothetical protein, I 97.5 0.00025 8.5E-09 77.9 10.3 86 437-529 18-108 (433)
124 2uzx_B Hepatocyte growth facto 97.3 3.9E-05 1.3E-09 90.1 0.0 75 438-517 635-710 (727)
125 2yrp_A Nuclear factor of activ 97.1 0.0023 7.8E-08 58.5 10.0 91 435-529 5-109 (114)
126 1ikn_C P50D, protein (NF-kappa 95.2 0.061 2.1E-06 49.5 8.3 89 440-530 5-107 (119)
127 1my7_A NF-kappab P65 (RELA) su 94.8 0.072 2.5E-06 48.7 7.7 87 440-529 5-101 (114)
128 1u36_A DNA-binding, nuclear fa 94.6 0.096 3.3E-06 47.3 7.9 87 440-528 5-105 (106)
129 1zk9_A Transcription factor RE 94.1 0.056 1.9E-06 49.1 5.2 87 439-528 13-109 (110)
130 1oy3_C Transcription factor P6 93.1 0.26 8.8E-06 46.3 8.0 87 440-529 5-101 (136)
131 3iag_C Recombining binding pro 92.7 0.29 9.9E-06 53.2 8.7 68 455-529 343-421 (422)
132 1a3q_A Protein (nuclear factor 90.5 0.62 2.1E-05 48.8 8.3 86 440-527 187-284 (285)
133 2v2t_A RELB, transcription fac 90.5 0.48 1.6E-05 49.7 7.3 84 439-528 191-287 (288)
134 3orj_A Sugar-binding protein; 90.1 0.66 2.3E-05 50.8 8.3 78 438-529 113-197 (439)
135 1ikn_A P65, protein (NF-kappa- 89.3 0.71 2.4E-05 48.3 7.6 88 439-529 176-273 (286)
136 1nfk_A Protein (nuclear factor 89.3 0.93 3.2E-05 48.2 8.6 89 439-529 210-312 (325)
137 1p7h_L Nuclear factor of activ 88.8 0.84 2.9E-05 47.8 7.7 86 438-528 185-285 (286)
138 1svc_P Protein (nuclear factor 88.5 0.87 3E-05 49.1 7.7 89 439-529 250-352 (365)
139 2o61_A Transcription factor P6 87.1 0.92 3.1E-05 51.3 7.1 88 440-530 178-275 (540)
140 1gji_A C-REL protein, C-REL pr 86.0 1.1 3.8E-05 46.6 6.6 87 439-528 179-274 (275)
141 1imh_C NF-AT5, tonebp, nuclear 85.9 2 7E-05 44.8 8.5 87 438-528 181-280 (281)
142 3brd_A LIN-12 and GLP-1 phenot 77.6 5.7 0.0002 44.0 8.5 81 440-528 377-474 (477)
143 2d9z_A Protein kinase C, NU ty 60.2 5.4 0.00019 37.0 3.1 29 101-131 12-40 (129)
144 3oky_A Plexin-A2; transmembran 57.3 31 0.0011 40.1 9.6 86 436-528 526-624 (681)
145 3orj_A Sugar-binding protein; 43.9 24 0.00084 38.7 5.4 69 450-528 34-111 (439)
146 2ayd_A WRKY transcription fact 34.0 12 0.0004 31.8 0.8 8 70-77 15-22 (76)
147 1wj2_A Probable WRKY transcrip 32.2 11 0.00039 32.0 0.5 9 70-78 18-26 (78)
148 1qho_A Alpha-amylase; glycosid 24.1 2.4E+02 0.0081 32.4 9.8 65 439-511 499-563 (686)
149 2coa_A Protein kinase C, D2 ty 20.0 89 0.0031 28.8 4.0 30 100-131 11-40 (125)
No 1
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=99.93 E-value=1.2e-26 Score=206.67 Aligned_cols=88 Identities=34% Similarity=0.719 Sum_probs=81.2
Q ss_pred ceEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCCCCCceeEEEEEeCCccc
Q 005128 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLA 517 (713)
Q Consensus 438 lfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PPh~pG~V~l~Vt~~n~~~ 517 (713)
+++|+||+|+|||..|||||+|+|.||.. ..+|.||||+++||++++++|+|||++|||.||+|+|+|+|+++..
T Consensus 6 ~~~Itd~sP~~gp~sGGTkv~I~G~~L~~-----gs~~~~~fG~~~vpa~~~s~~vl~C~tPp~~~G~v~~~v~~d~~~~ 80 (95)
T 2cxk_A 6 SGMVTDYSPEWSYPEGGVKVLITGPWQEA-----SNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQII 80 (95)
T ss_dssp CSCCCEEECSEECTTCCCEEEEESSCCCC-----SSCEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTEEC
T ss_pred cEEEEEECCCcccCCCCEEEEEEeECCCC-----CccEEEEECCEEEeEEEeECCEEEEEecCCCCceEeEEEEECCeec
Confidence 56899999999999999999999999965 4589999999999999999999999999999999999999998874
Q ss_pred cccceeeeecCCCC
Q 005128 518 CSEVREFEYREKPS 531 (713)
Q Consensus 518 cSev~eFEYr~~~~ 531 (713)
|++++||||+.+.
T Consensus 81 -s~~~~FeY~~~Pt 93 (95)
T 2cxk_A 81 -SNSVVFEYKSGPS 93 (95)
T ss_dssp -SCCEEEEECCC--
T ss_pred -CCceEEEEeCCCC
Confidence 9999999998654
No 2
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.56 E-value=2e-14 Score=122.92 Aligned_cols=78 Identities=29% Similarity=0.361 Sum_probs=74.7
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
.+++.|++.|+++|.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+++||+
T Consensus 16 ~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 16 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 366778889999999999999999999999999999999999999999999999999999999999999999999986
No 3
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.53 E-value=4.5e-14 Score=126.29 Aligned_cols=84 Identities=23% Similarity=0.181 Sum_probs=79.5
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.+++.|++++..|..|+||||+||..|+..++++|+..|++++.+|..|+||||+|+..|+.++|++|+.+|+++.
T Consensus 21 ~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 100 (123)
T 3aaa_C 21 DEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKT 100 (123)
T ss_dssp HHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 46677888999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 101 ~~~~ 104 (123)
T 3aaa_C 101 VKGP 104 (123)
T ss_dssp CCCT
T ss_pred CcCC
Confidence 7664
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.53 E-value=3.4e-14 Score=136.91 Aligned_cols=83 Identities=24% Similarity=0.229 Sum_probs=66.8
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
..+++.|++.|+++|.+|..|+||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.++|++|+++||++
T Consensus 83 ~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 83 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 34677888888889888888999999999999999999999999999988999999999999999999999999999887
Q ss_pred ccc
Q 005128 705 FLE 707 (713)
Q Consensus 705 ~~~ 707 (713)
.-.
T Consensus 163 e~~ 165 (169)
T 4gpm_A 163 EHH 165 (169)
T ss_dssp ---
T ss_pred CCC
Confidence 643
No 5
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.51 E-value=8.8e-14 Score=133.99 Aligned_cols=85 Identities=25% Similarity=0.280 Sum_probs=79.7
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
..+++.+++.|++++..|..|+||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|+.++|++|+..||++
T Consensus 50 ~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~ 129 (169)
T 4gpm_A 50 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV 129 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 34677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCc
Q 005128 705 FLEGK 709 (713)
Q Consensus 705 ~~~~k 709 (713)
..+++
T Consensus 130 ~~~d~ 134 (169)
T 4gpm_A 130 NTSDS 134 (169)
T ss_dssp TCCCT
T ss_pred cccCC
Confidence 88765
No 6
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.47 E-value=2.8e-13 Score=123.42 Aligned_cols=84 Identities=27% Similarity=0.239 Sum_probs=76.5
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+|+++.
T Consensus 28 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 107 (136)
T 2jab_A 28 DEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVN 107 (136)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 36778888899999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 108 ~~~~ 111 (136)
T 2jab_A 108 AQDK 111 (136)
T ss_dssp CCCT
T ss_pred CcCC
Confidence 7654
No 7
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.46 E-value=2.7e-13 Score=123.22 Aligned_cols=84 Identities=19% Similarity=0.127 Sum_probs=79.4
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|+||||+||..|+..++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+|+++.
T Consensus 24 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 103 (137)
T 3c5r_A 24 PSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN 103 (137)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 35677888999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 104 ~~~~ 107 (137)
T 3c5r_A 104 AVNI 107 (137)
T ss_dssp CCCT
T ss_pred CCCC
Confidence 7654
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.43 E-value=2.7e-13 Score=139.28 Aligned_cols=84 Identities=21% Similarity=0.119 Sum_probs=79.8
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|+++|..|..|+||||+||..|+.+++++|++.|+++|.+|..|+||||+||..|+.++|++||.+|||+.
T Consensus 133 ~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~ 212 (269)
T 4b93_B 133 QVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQ 212 (269)
T ss_dssp HHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 35677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
++++
T Consensus 213 ~~d~ 216 (269)
T 4b93_B 213 VLNK 216 (269)
T ss_dssp CCCT
T ss_pred CcCC
Confidence 8765
No 9
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.43 E-value=7.3e-13 Score=123.65 Aligned_cols=84 Identities=21% Similarity=0.188 Sum_probs=79.6
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+|+++.
T Consensus 56 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 135 (165)
T 3twr_A 56 SVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT 135 (165)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 46777888999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 136 ~~~~ 139 (165)
T 3twr_A 136 KKNR 139 (165)
T ss_dssp CCCT
T ss_pred ccCC
Confidence 7654
No 10
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.42 E-value=4.8e-13 Score=133.74 Aligned_cols=83 Identities=23% Similarity=0.224 Sum_probs=78.8
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|+++|..|..|+||||+||..|+..++++|+..|+++|.+|..|+||||+|+..|+.++|++|+.+|+++.
T Consensus 51 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 130 (239)
T 1ycs_B 51 DLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF 130 (239)
T ss_dssp HHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 46788889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccC
Q 005128 706 LEG 708 (713)
Q Consensus 706 ~~~ 708 (713)
.++
T Consensus 131 ~~~ 133 (239)
T 1ycs_B 131 AMT 133 (239)
T ss_dssp CCC
T ss_pred eec
Confidence 755
No 11
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.41 E-value=2.2e-13 Score=124.10 Aligned_cols=80 Identities=21% Similarity=0.241 Sum_probs=43.1
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR-GRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~-G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
+++.|++.|++++..|..|+||||+||. |+.+++++|+..|++++.+|.. |+||||+|+..|+.+++++|+++|+++.
T Consensus 27 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 105 (136)
T 1d9s_A 27 TVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLD 105 (136)
T ss_dssp HHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCC
T ss_pred HHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 3344444555555555555555555555 5555555555555555555555 5555555555555555555555555554
Q ss_pred cc
Q 005128 706 LE 707 (713)
Q Consensus 706 ~~ 707 (713)
.+
T Consensus 106 ~~ 107 (136)
T 1d9s_A 106 VC 107 (136)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 12
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.41 E-value=1e-12 Score=124.80 Aligned_cols=84 Identities=20% Similarity=0.217 Sum_probs=78.1
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|+||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+|+++.
T Consensus 53 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 132 (179)
T 3f6q_A 53 AVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS 132 (179)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc
Confidence 46677888899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 133 ~~~~ 136 (179)
T 3f6q_A 133 ICNK 136 (179)
T ss_dssp BCCT
T ss_pred hhcc
Confidence 7654
No 13
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.41 E-value=3.5e-13 Score=125.61 Aligned_cols=83 Identities=22% Similarity=0.169 Sum_probs=72.0
Q ss_pred HHHHHHhCCCCCCcccCCCCc-HHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQG-VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~T-pLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
+++.|++.|++++..|..|+| |||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+++|+++.
T Consensus 59 ~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~ 138 (156)
T 1bi7_B 59 VAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR 138 (156)
T ss_dssp HHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC
Confidence 456677889999999999999 9999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 139 ~~~~ 142 (156)
T 1bi7_B 139 GSNH 142 (156)
T ss_dssp ----
T ss_pred ccCc
Confidence 7654
No 14
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.41 E-value=1.1e-12 Score=121.50 Aligned_cols=84 Identities=19% Similarity=0.225 Sum_probs=79.2
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+|+++.
T Consensus 48 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 127 (153)
T 1awc_B 48 STTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 36677889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 128 ~~~~ 131 (153)
T 1awc_B 128 TQSK 131 (153)
T ss_dssp CCCT
T ss_pred ccCC
Confidence 7654
No 15
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.41 E-value=1.9e-13 Score=120.51 Aligned_cols=84 Identities=24% Similarity=0.184 Sum_probs=79.2
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+|+..|+..++++|+..|++++.+|..|+||||+|+..|+.+++++|+++||++.
T Consensus 23 ~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n 102 (115)
T 2l6b_A 23 EEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN 102 (115)
T ss_dssp HHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 36677888999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+.+
T Consensus 103 ~~~~ 106 (115)
T 2l6b_A 103 ARSW 106 (115)
T ss_dssp HHSC
T ss_pred cCCc
Confidence 7654
No 16
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.40 E-value=1e-12 Score=125.94 Aligned_cols=94 Identities=21% Similarity=0.266 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHH
Q 005128 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWASYFGSWE 692 (713)
Q Consensus 614 LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD-~~G~TPLH~Aa~~G~~e 692 (713)
.|..++... ....++.+++ |++++..|..|+||||+||..|+.+++++|+..|+++|.+| ..|+||||+|+..|+.+
T Consensus 47 ~L~~A~~~g-~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~ 124 (183)
T 3deo_A 47 PWWTAARKA-DEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPE 124 (183)
T ss_dssp HHHHHHHTT-CHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcC-CHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHH
Confidence 344444433 2346677777 99999999999999999999999999999999999999998 89999999999999999
Q ss_pred HHHHHHHcCCCccccCc
Q 005128 693 QLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 693 iV~lLL~~GADi~~~~k 709 (713)
++++|+.+|+++..+++
T Consensus 125 ~v~~Ll~~ga~~~~~d~ 141 (183)
T 3deo_A 125 VVEALVELGADIEVEDE 141 (183)
T ss_dssp HHHHHHHHTCCTTCCCT
T ss_pred HHHHHHHcCCCCcCCCC
Confidence 99999999999987654
No 17
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.40 E-value=8.3e-13 Score=129.64 Aligned_cols=84 Identities=19% Similarity=0.176 Sum_probs=79.4
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~-GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
.+++.|++.|++++..|..|+||||+||..|+..++++|+.. |++++.+|..|+||||+|+..|+.++|++|+.+|+++
T Consensus 87 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 166 (222)
T 3ehr_A 87 SWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGART 166 (222)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred HHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 467788889999999999999999999999999999999998 9999999999999999999999999999999999999
Q ss_pred cccCc
Q 005128 705 FLEGK 709 (713)
Q Consensus 705 ~~~~k 709 (713)
.++++
T Consensus 167 ~~~~~ 171 (222)
T 3ehr_A 167 DLRNI 171 (222)
T ss_dssp CCCCT
T ss_pred ccccC
Confidence 88664
No 18
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.39 E-value=5.8e-13 Score=121.35 Aligned_cols=77 Identities=22% Similarity=0.163 Sum_probs=72.5
Q ss_pred HHHHHHhCCCCCCcccCC-CCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 627 LVWKIHEGGKGPNVIDDG-GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~-G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
+++.|++.|++++..|.. |.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 59 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 59 VAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 445566779999999999 99999999999999999999999999999999999999999999999999999999986
No 19
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.38 E-value=1.7e-12 Score=121.97 Aligned_cols=82 Identities=21% Similarity=0.192 Sum_probs=55.1
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
+++.|++.|++++..|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++|++|+..|+++..
T Consensus 51 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 51 TVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT 130 (172)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 44555556666666666677777777777777777777666777666666677777777777777777777776666665
Q ss_pred cC
Q 005128 707 EG 708 (713)
Q Consensus 707 ~~ 708 (713)
++
T Consensus 131 ~~ 132 (172)
T 3v30_A 131 EA 132 (172)
T ss_dssp CC
T ss_pred cC
Confidence 44
No 20
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.37 E-value=2.9e-12 Score=120.75 Aligned_cols=84 Identities=27% Similarity=0.344 Sum_probs=76.0
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+++|+++.
T Consensus 61 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 140 (169)
T 2y1l_E 61 EIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 35677788899999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 141 ~~~~ 144 (169)
T 2y1l_E 141 AQDK 144 (169)
T ss_dssp CCCT
T ss_pred CcCC
Confidence 7654
No 21
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.37 E-value=1.5e-12 Score=131.04 Aligned_cols=83 Identities=22% Similarity=0.315 Sum_probs=77.7
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD-~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
.+++.|++ |+++|..|..|+||||+||..|+..++++|+..|+++|.+| ..|+||||+|+..|+.++|++|+.+|+++
T Consensus 59 ~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 137 (244)
T 3ui2_A 59 QALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 137 (244)
T ss_dssp HHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 35677777 99999999999999999999999999999999999999998 88999999999999999999999999999
Q ss_pred cccCc
Q 005128 705 FLEGK 709 (713)
Q Consensus 705 ~~~~k 709 (713)
..+++
T Consensus 138 ~~~d~ 142 (244)
T 3ui2_A 138 EVEDE 142 (244)
T ss_dssp TCCCT
T ss_pred CCCCC
Confidence 87654
No 22
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.36 E-value=2e-12 Score=119.26 Aligned_cols=82 Identities=22% Similarity=0.292 Sum_probs=73.1
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
+++.|++.|++++..|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.. +++..
T Consensus 50 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~ 128 (156)
T 1bd8_A 50 IALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR 128 (156)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC
Confidence 55667788999999999999999999999999999999999999999999999999999999999999999988 88876
Q ss_pred cCc
Q 005128 707 EGK 709 (713)
Q Consensus 707 ~~k 709 (713)
+++
T Consensus 129 ~~~ 131 (156)
T 1bd8_A 129 RDA 131 (156)
T ss_dssp CCT
T ss_pred cCC
Confidence 653
No 23
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.36 E-value=2.9e-12 Score=119.78 Aligned_cols=83 Identities=22% Similarity=0.291 Sum_probs=64.9
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
+++.|++.|++++..|..|.||||+|+..|+..++++|+..|++++.+|..|+||||+|+..|+.+++++|+..|+++..
T Consensus 51 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 130 (167)
T 3v31_A 51 VVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI 130 (167)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 55666677788887788888888888888888888888888888888888888888888888888888888888887776
Q ss_pred cCc
Q 005128 707 EGK 709 (713)
Q Consensus 707 ~~k 709 (713)
+++
T Consensus 131 ~~~ 133 (167)
T 3v31_A 131 ETD 133 (167)
T ss_dssp CCT
T ss_pred cCC
Confidence 543
No 24
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.36 E-value=2.4e-12 Score=128.99 Aligned_cols=95 Identities=17% Similarity=0.078 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005128 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWE 692 (713)
Q Consensus 613 ~LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~e 692 (713)
..|..+.... ...+++.|++.|++++..|..|+||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.+
T Consensus 23 t~L~~A~~~g-~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~ 101 (229)
T 2vge_A 23 VLLLDAALTG-ELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTV 101 (229)
T ss_dssp HHHHHHHHHT-CHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcC-CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 3344444433 234667788889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccccC
Q 005128 693 QLRVRLRIQHQHFLEG 708 (713)
Q Consensus 693 iV~lLL~~GADi~~~~ 708 (713)
+|++|++.|+++..++
T Consensus 102 ~v~~Ll~~ga~~~~~~ 117 (229)
T 2vge_A 102 ICMALVQHGAAIFATT 117 (229)
T ss_dssp HHHHHHTTTCCTTCCC
T ss_pred HHHHHHHcCCCccccc
Confidence 9999999999998754
No 25
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.36 E-value=2.2e-12 Score=129.17 Aligned_cols=85 Identities=20% Similarity=0.151 Sum_probs=78.4
Q ss_pred HHHHHHHHhCCCCCCcccCC-CCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 625 EWLVWKIHEGGKGPNVIDDG-GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~-G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
..+++.|++.|++++..+.. |+||||+||..|+..++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+||+
T Consensus 171 ~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 250 (282)
T 1oy3_D 171 AEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250 (282)
T ss_dssp HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCC
Confidence 34677788899999988854 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCc
Q 005128 704 HFLEGK 709 (713)
Q Consensus 704 i~~~~k 709 (713)
+..+++
T Consensus 251 ~~~~~~ 256 (282)
T 1oy3_D 251 EPEDGG 256 (282)
T ss_dssp CCCCC-
T ss_pred cCcCCC
Confidence 987654
No 26
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.35 E-value=5.1e-12 Score=119.01 Aligned_cols=84 Identities=26% Similarity=0.225 Sum_probs=79.3
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+..|+++.
T Consensus 28 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 107 (169)
T 2y1l_E 28 DEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVN 107 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 36778889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 108 ~~~~ 111 (169)
T 2y1l_E 108 ANDM 111 (169)
T ss_dssp CCCT
T ss_pred CCCC
Confidence 7653
No 27
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.35 E-value=4.3e-12 Score=111.64 Aligned_cols=78 Identities=29% Similarity=0.361 Sum_probs=73.7
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 49 ~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 49 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 356778888999999999999999999999999999999999999999999999999999999999999999999986
No 28
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.35 E-value=4.8e-12 Score=111.33 Aligned_cols=84 Identities=29% Similarity=0.339 Sum_probs=78.1
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+..|+++.
T Consensus 16 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 95 (126)
T 1n0r_A 16 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 95 (126)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCc
Confidence 35667778899999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 96 ~~~~ 99 (126)
T 1n0r_A 96 AKDK 99 (126)
T ss_dssp CCCT
T ss_pred ccCC
Confidence 7653
No 29
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.35 E-value=3.1e-12 Score=118.50 Aligned_cols=78 Identities=22% Similarity=0.178 Sum_probs=55.6
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCC-CcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS-PNFRDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~Gad-vN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++ ++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 355666677777777777777777777777777777777777776 477777777777777777777777777777765
No 30
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.34 E-value=2.2e-12 Score=110.16 Aligned_cols=66 Identities=29% Similarity=0.371 Sum_probs=61.9
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 644 GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 644 ~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
+|+||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.+++++|+..|+++..+++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 66 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK 66 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence 489999999999999999999999999999999999999999999999999999999999987654
No 31
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.34 E-value=3.7e-12 Score=121.97 Aligned_cols=84 Identities=21% Similarity=0.206 Sum_probs=76.1
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+|+++.
T Consensus 82 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 161 (192)
T 2rfm_A 82 GIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADIS 161 (192)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 35677778899999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 162 ~~~~ 165 (192)
T 2rfm_A 162 ARDL 165 (192)
T ss_dssp CBCT
T ss_pred CcCC
Confidence 7653
No 32
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.34 E-value=1.2e-12 Score=121.87 Aligned_cols=83 Identities=22% Similarity=0.236 Sum_probs=78.0
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRT-ALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~T-PLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
.+++.|++.|++++..|..|+||||+|+ .|+..++++|+..|++++.+|..|+| |||+|+..|+.++|++|+.+|+++
T Consensus 26 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~ 104 (156)
T 1bi7_B 26 EEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104 (156)
T ss_dssp HHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 4677888999999999999999999986 99999999999999999999999999 999999999999999999999999
Q ss_pred cccCc
Q 005128 705 FLEGK 709 (713)
Q Consensus 705 ~~~~k 709 (713)
..+++
T Consensus 105 ~~~d~ 109 (156)
T 1bi7_B 105 DVRDA 109 (156)
T ss_dssp SCCCT
T ss_pred cccCC
Confidence 87654
No 33
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.33 E-value=4.5e-12 Score=117.38 Aligned_cols=82 Identities=20% Similarity=0.288 Sum_probs=76.1
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc-c
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH-F 705 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi-~ 705 (713)
+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+..|++. .
T Consensus 52 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 131 (162)
T 1ihb_A 52 IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVG 131 (162)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCC
Confidence 556677889999999999999999999999999999999999999999999999999999999999999999999984 5
Q ss_pred ccC
Q 005128 706 LEG 708 (713)
Q Consensus 706 ~~~ 708 (713)
.++
T Consensus 132 ~~~ 134 (162)
T 1ihb_A 132 HRN 134 (162)
T ss_dssp CCC
T ss_pred CcC
Confidence 543
No 34
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.33 E-value=6.3e-12 Score=114.46 Aligned_cols=76 Identities=22% Similarity=0.234 Sum_probs=71.9
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQ 701 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~G 701 (713)
.+++.|++.|++++..|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|++.|
T Consensus 61 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 61 EIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 4677788899999999999999999999999999999999999999999999999999999999999999999876
No 35
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.32 E-value=6.7e-12 Score=127.46 Aligned_cols=96 Identities=16% Similarity=0.072 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005128 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWE 692 (713)
Q Consensus 613 ~LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~e 692 (713)
..|..+.... ...+++.|++.|+++|..|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+
T Consensus 42 t~l~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~ 120 (299)
T 1s70_B 42 AVFLAACSSG-DTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLD 120 (299)
T ss_dssp HHHHHHHHHT-CHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred cHHHHHHHcC-CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 3444444333 233667788889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccccCc
Q 005128 693 QLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 693 iV~lLL~~GADi~~~~k 709 (713)
+|++|+.+|+++..+++
T Consensus 121 ~v~~Ll~~g~~~~~~~~ 137 (299)
T 1s70_B 121 IAEYLISQGAHVGAVNS 137 (299)
T ss_dssp HHHHHHHTTCCTTCCCT
T ss_pred HHHHHHhCCCCCCCcCC
Confidence 99999999999887653
No 36
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.31 E-value=8.9e-12 Score=110.18 Aligned_cols=84 Identities=20% Similarity=0.186 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005128 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWE 692 (713)
Q Consensus 613 ~LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~e 692 (713)
..|..++... ...+++.|++.|++++..|..|.||||+||..|+..++++|+..|++++.+|..|+||||+|+..|+.+
T Consensus 26 t~L~~A~~~g-~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 104 (110)
T 2zgd_A 26 KKLLEAARAG-QDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNED 104 (110)
T ss_dssp HHHHHHHHHT-CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred hHHHHHHHcC-CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHH
Confidence 3344344333 234667888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 005128 693 QLRVR 697 (713)
Q Consensus 693 iV~lL 697 (713)
++++|
T Consensus 105 ~~~~L 109 (110)
T 2zgd_A 105 LAEIL 109 (110)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99987
No 37
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.31 E-value=6.1e-12 Score=129.38 Aligned_cols=84 Identities=21% Similarity=0.152 Sum_probs=79.9
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|+||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.++|++|+.+||++.
T Consensus 228 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 307 (351)
T 3utm_A 228 QVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPS 307 (351)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 46677888999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
++++
T Consensus 308 ~~~~ 311 (351)
T 3utm_A 308 IISL 311 (351)
T ss_dssp CCCT
T ss_pred CcCC
Confidence 8764
No 38
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.31 E-value=5.9e-12 Score=126.23 Aligned_cols=84 Identities=23% Similarity=0.268 Sum_probs=77.8
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+++|+++.
T Consensus 138 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 138 GMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217 (253)
T ss_dssp SHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 36677888899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
++++
T Consensus 218 ~~d~ 221 (253)
T 1yyh_A 218 ITDH 221 (253)
T ss_dssp CCCT
T ss_pred cccc
Confidence 7654
No 39
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.31 E-value=4e-12 Score=132.29 Aligned_cols=82 Identities=16% Similarity=0.086 Sum_probs=52.7
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~-GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
+++.|++.|+++|.+|..|+||||+||..|+..+++.|+.. |+++|.+|..|+||||+|+..|+.++|++||++||++.
T Consensus 221 i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 221 ITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 300 (337)
T ss_dssp HHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 33445566666666666666666666666666666666653 66666666666666666666666666666666666665
Q ss_pred ccC
Q 005128 706 LEG 708 (713)
Q Consensus 706 ~~~ 708 (713)
.++
T Consensus 301 ~~~ 303 (337)
T 4g8k_A 301 CGD 303 (337)
T ss_dssp TCC
T ss_pred CCC
Confidence 543
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.30 E-value=9e-12 Score=121.26 Aligned_cols=84 Identities=20% Similarity=0.145 Sum_probs=79.3
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCC
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGSWEQLRVRL-RIQHQ 703 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~G-advN~rD~~G~TPLH~Aa~~G~~eiV~lLL-~~GAD 703 (713)
.+++.|++.|++++..|..|+||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+..|+.+++++|+ ..|++
T Consensus 121 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~ 200 (228)
T 2dzn_A 121 EVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE 200 (228)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC
T ss_pred hHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 4667788899999999999999999999999999999999999 999999999999999999999999999999 99999
Q ss_pred ccccCc
Q 005128 704 HFLEGK 709 (713)
Q Consensus 704 i~~~~k 709 (713)
+..+++
T Consensus 201 ~~~~~~ 206 (228)
T 2dzn_A 201 YDLVDN 206 (228)
T ss_dssp SCCBCT
T ss_pred CCccCC
Confidence 988654
No 41
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.30 E-value=3.8e-12 Score=131.63 Aligned_cols=81 Identities=11% Similarity=0.072 Sum_probs=76.7
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
..+++.|++.|+++|..|..|+||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.++|++|+.+|++.
T Consensus 185 ~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 185 LHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 34678888999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred c
Q 005128 705 F 705 (713)
Q Consensus 705 ~ 705 (713)
.
T Consensus 265 ~ 265 (278)
T 1dcq_A 265 F 265 (278)
T ss_dssp C
T ss_pred C
Confidence 4
No 42
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.29 E-value=9.5e-12 Score=116.27 Aligned_cols=83 Identities=18% Similarity=0.072 Sum_probs=77.8
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
+++.+++.|.+++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+..|+++..
T Consensus 18 ~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 97 (167)
T 3v31_A 18 YLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE 97 (167)
T ss_dssp HHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCc
Confidence 55667777899999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCc
Q 005128 707 EGK 709 (713)
Q Consensus 707 ~~k 709 (713)
+++
T Consensus 98 ~~~ 100 (167)
T 3v31_A 98 YDW 100 (167)
T ss_dssp CCT
T ss_pred CCC
Confidence 654
No 43
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.29 E-value=1.2e-11 Score=121.21 Aligned_cols=85 Identities=21% Similarity=0.166 Sum_probs=79.6
Q ss_pred HHHHHHHHhCCCCCCccc-CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 625 EWLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D-~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
..+++.|++.|++++..+ ..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 129 ~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 208 (241)
T 1k1a_A 129 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD 208 (241)
T ss_dssp HHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 346788889999999988 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCc
Q 005128 704 HFLEGK 709 (713)
Q Consensus 704 i~~~~k 709 (713)
+..+++
T Consensus 209 ~~~~~~ 214 (241)
T 1k1a_A 209 SSLKNC 214 (241)
T ss_dssp TTCCCT
T ss_pred CCCcCC
Confidence 987654
No 44
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.29 E-value=1.5e-11 Score=113.79 Aligned_cols=83 Identities=25% Similarity=0.173 Sum_probs=76.5
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.+++.|++++ .|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+|+++.
T Consensus 16 ~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 94 (153)
T 1awc_B 16 DEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVN 94 (153)
T ss_dssp HHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCC
Confidence 35677788888877 68999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 95 ~~~~ 98 (153)
T 1awc_B 95 AKDM 98 (153)
T ss_dssp CCCT
T ss_pred CCCC
Confidence 7653
No 45
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.29 E-value=1.4e-11 Score=119.68 Aligned_cols=82 Identities=23% Similarity=0.289 Sum_probs=60.8
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+++|+++..
T Consensus 107 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 107 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 186 (223)
T ss_dssp HHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 55666667777777777777777777777777777777777777777777777777777777777777777777777765
Q ss_pred cC
Q 005128 707 EG 708 (713)
Q Consensus 707 ~~ 708 (713)
++
T Consensus 187 ~~ 188 (223)
T 2f8y_A 187 TD 188 (223)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 46
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.29 E-value=1e-11 Score=123.58 Aligned_cols=84 Identities=15% Similarity=0.062 Sum_probs=79.6
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIA-TGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~-~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||+|+..|+.+++++|+++||++
T Consensus 200 ~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~ 279 (285)
T 1wdy_A 200 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279 (285)
T ss_dssp HHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCS
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 46677888999999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred cccCc
Q 005128 705 FLEGK 709 (713)
Q Consensus 705 ~~~~k 709 (713)
.+++.
T Consensus 280 ~~~d~ 284 (285)
T 1wdy_A 280 DCGDL 284 (285)
T ss_dssp CCSSC
T ss_pred Ccccc
Confidence 98874
No 47
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.29 E-value=7.7e-12 Score=139.28 Aligned_cols=79 Identities=20% Similarity=0.112 Sum_probs=41.0
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
+++.|++.|+++|..|..|+||||+||..|+..++++|+.+|++++.+|..|+||||+|+..|+.+++++|+.+||++.
T Consensus 189 ~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 189 LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp HHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---
T ss_pred HHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 4444455555555555555555555555555555555555555555555555555555555555555555555555544
No 48
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.29 E-value=1.6e-11 Score=116.52 Aligned_cols=83 Identities=20% Similarity=0.172 Sum_probs=76.3
Q ss_pred HHHHHHhC-CCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 627 LVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 627 LvekLle~-Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
+++.+++. +.+++..|..|+||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.++|++|+.+|+++.
T Consensus 20 ~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 99 (179)
T 3f6q_A 20 AVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADIN 99 (179)
T ss_dssp HHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 44555655 77899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 100 ~~d~ 103 (179)
T 3f6q_A 100 AVNE 103 (179)
T ss_dssp CCCT
T ss_pred ccCC
Confidence 7654
No 49
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.27 E-value=2e-11 Score=113.87 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=75.7
Q ss_pred HHHHHHh-CCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 627 LVWKIHE-GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 627 LvekLle-~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.++.+++ .+.+++..+..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+..|+++.
T Consensus 23 ~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 102 (165)
T 3twr_A 23 TVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVN 102 (165)
T ss_dssp HHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCC
Confidence 4555665 567788889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 103 ~~~~ 106 (165)
T 3twr_A 103 VADL 106 (165)
T ss_dssp CCCT
T ss_pred CcCC
Confidence 7654
No 50
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.27 E-value=1.5e-11 Score=127.24 Aligned_cols=83 Identities=16% Similarity=0.136 Sum_probs=75.7
Q ss_pred HHHHHHhCCCCCC------cccCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHH
Q 005128 627 LVWKIHEGGKGPN------VIDDGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVR 697 (713)
Q Consensus 627 LvekLle~Gad~N------~~D~~G~TpLHlAA~l---G~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lL 697 (713)
.+..+++.|.+++ ..|..|+||||+||.. |+..++++|+..|+++|.+|..|+||||+|+..|+.++|++|
T Consensus 145 ~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~L 224 (278)
T 1dcq_A 145 GLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLL 224 (278)
T ss_dssp HHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4566778888854 4488999999999999 899999999999999999999999999999999999999999
Q ss_pred HHcCCCccccCc
Q 005128 698 LRIQHQHFLEGK 709 (713)
Q Consensus 698 L~~GADi~~~~k 709 (713)
+.+||++..+++
T Consensus 225 l~~gad~~~~d~ 236 (278)
T 1dcq_A 225 LRGKASIEIANE 236 (278)
T ss_dssp HHTTCCTTCCCT
T ss_pred HHcCCCCCCccC
Confidence 999999998764
No 51
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.27 E-value=1.6e-11 Score=119.92 Aligned_cols=84 Identities=25% Similarity=0.279 Sum_probs=78.4
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|++.|+++.
T Consensus 120 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 199 (231)
T 3aji_A 120 EIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY 199 (231)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 36677888999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 200 ~~~~ 203 (231)
T 3aji_A 200 IENK 203 (231)
T ss_dssp CCCT
T ss_pred CCCC
Confidence 7654
No 52
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.27 E-value=1.2e-11 Score=112.35 Aligned_cols=74 Identities=24% Similarity=0.367 Sum_probs=67.8
Q ss_pred CCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 635 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 635 Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
|+++ ..|..|+||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+..|+++..+++
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 74 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGY 74 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCG
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCC
Confidence 5677 6899999999999999999999999999999999999999999999999999999999999999887654
No 53
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.26 E-value=6.1e-12 Score=140.05 Aligned_cols=98 Identities=19% Similarity=0.118 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHhCCCC--CCcccCCCCcHHHHHHH---hCCHHHHHHHHHcCCCCcccCCCCCcHHHH
Q 005128 612 DKLIQNLLRNRLC--EWLVWKIHEGGKG--PNVIDDGGQGVVHLAAA---LGYEWAMRPIIATGVSPNFRDARGRTALHW 684 (713)
Q Consensus 612 d~LLq~lLk~kl~--ewLvekLle~Gad--~N~~D~~G~TpLHlAA~---lG~~~~V~lLL~~GadvN~rD~~G~TPLH~ 684 (713)
+.|+..+....+. ..|++.-.+-... ....|..|+||||+||. .|+..++++|+..|+++|.+|..|+||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 4455555544432 3444443332222 22457899999999966 999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCccccCc
Q 005128 685 ASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 685 Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
||..|+.++|++||.+||++.++++
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~~d~ 238 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGTVNE 238 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSCCCT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999999999998765
No 54
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.26 E-value=2.4e-12 Score=125.60 Aligned_cols=83 Identities=7% Similarity=-0.042 Sum_probs=66.5
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCC------HHHHHHHHHcCCCCcccCCCCC-cHHHHHHHcC-----CHHHH
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGY------EWAMRPIIATGVSPNFRDARGR-TALHWASYFG-----SWEQL 694 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~------~~~V~lLL~~GadvN~rD~~G~-TPLH~Aa~~G-----~~eiV 694 (713)
+++.|++.|+++|.+|..|+||||+|+..|+ ..++++|+.+|+++|.+|..|+ ||||+|+..| +.+++
T Consensus 57 iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv 136 (186)
T 3t8k_A 57 ISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLY 136 (186)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHH
Confidence 5566777888888888888888888888886 4678888888888888888888 8888888844 34678
Q ss_pred HHHHH-cCCCccccCc
Q 005128 695 RVRLR-IQHQHFLEGK 709 (713)
Q Consensus 695 ~lLL~-~GADi~~~~k 709 (713)
++|+. +||++.++++
T Consensus 137 ~~Ll~~~gad~~~~d~ 152 (186)
T 3t8k_A 137 KLIFSQSGLQLLIKDK 152 (186)
T ss_dssp HHHHTSTTCCTTCCCT
T ss_pred HHHHHhcCCCCcccCC
Confidence 88888 8888887665
No 55
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.26 E-value=9.4e-12 Score=119.16 Aligned_cols=83 Identities=19% Similarity=0.114 Sum_probs=77.2
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
+++.|++.|++++..|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+..|+++..
T Consensus 50 ~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 129 (192)
T 2rfm_A 50 AIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVND 129 (192)
T ss_dssp GHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 45566777899999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCc
Q 005128 707 EGK 709 (713)
Q Consensus 707 ~~k 709 (713)
+++
T Consensus 130 ~~~ 132 (192)
T 2rfm_A 130 RNL 132 (192)
T ss_dssp CCT
T ss_pred CCC
Confidence 654
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.26 E-value=1.3e-11 Score=126.40 Aligned_cols=84 Identities=23% Similarity=0.190 Sum_probs=71.8
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLR-IQHQH 704 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~-~GADi 704 (713)
.+++.+++.|..++..|..|+||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.++|++|+. .|+++
T Consensus 164 ~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~ 243 (276)
T 4hbd_A 164 ETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI 243 (276)
T ss_dssp HHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT
T ss_pred HHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC
Confidence 35666777788888888889999999999999999999999999999999999999999999999999999998 88888
Q ss_pred cccCc
Q 005128 705 FLEGK 709 (713)
Q Consensus 705 ~~~~k 709 (713)
.++++
T Consensus 244 ~~~d~ 248 (276)
T 4hbd_A 244 SLTDR 248 (276)
T ss_dssp TCCCT
T ss_pred cCcCC
Confidence 87654
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.26 E-value=9.7e-12 Score=116.75 Aligned_cols=83 Identities=17% Similarity=0.078 Sum_probs=77.7
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+|+++.
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 83 DIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF 162 (172)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 46778889999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ccC
Q 005128 706 LEG 708 (713)
Q Consensus 706 ~~~ 708 (713)
.+.
T Consensus 163 ~~~ 165 (172)
T 3v30_A 163 QSN 165 (172)
T ss_dssp CC-
T ss_pred ccc
Confidence 543
No 58
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.25 E-value=1.9e-11 Score=127.98 Aligned_cols=81 Identities=22% Similarity=0.204 Sum_probs=53.4
Q ss_pred HHHHHhCCCCCCc------ccCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHH
Q 005128 628 VWKIHEGGKGPNV------IDDGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRL 698 (713)
Q Consensus 628 vekLle~Gad~N~------~D~~G~TpLHlAA~l---G~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL 698 (713)
+..+++.|++++. .+..|+||||+||.. |+..++++|+..|+++|.+|..|+||||+|+..|+.++|++||
T Consensus 167 v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll 246 (301)
T 2b0o_E 167 VLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLL 246 (301)
T ss_dssp HHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4445566666665 466666666666665 6666666666666666666666666666666666666666666
Q ss_pred HcCCCccccC
Q 005128 699 RIQHQHFLEG 708 (713)
Q Consensus 699 ~~GADi~~~~ 708 (713)
.+||++.+++
T Consensus 247 ~~gad~~~~d 256 (301)
T 2b0o_E 247 KGRALVGTVN 256 (301)
T ss_dssp HTTCCCSCCC
T ss_pred HcCCCCCCcC
Confidence 6666666554
No 59
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.24 E-value=2.3e-11 Score=119.35 Aligned_cols=84 Identities=20% Similarity=0.156 Sum_probs=79.6
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.+++++|+++|+++.
T Consensus 125 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 125 DLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence 46777888999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 205 ~~d~ 208 (237)
T 3b7b_A 205 LKNK 208 (237)
T ss_dssp CCCT
T ss_pred ccCC
Confidence 8765
No 60
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.24 E-value=1.4e-11 Score=122.97 Aligned_cols=80 Identities=18% Similarity=0.077 Sum_probs=75.0
Q ss_pred HHHHHHHHhCCCCCCccc--------------CCCCcHHHHHHHhCCHHHHHHHHH---cCCCCcccCCCCCcHHHHHHH
Q 005128 625 EWLVWKIHEGGKGPNVID--------------DGGQGVVHLAAALGYEWAMRPIIA---TGVSPNFRDARGRTALHWASY 687 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D--------------~~G~TpLHlAA~lG~~~~V~lLL~---~GadvN~rD~~G~TPLH~Aa~ 687 (713)
..+++.|++.|++++..+ ..|+||||+||..|+.+++++|+. .|++++.+|..|+||||+|+.
T Consensus 106 ~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~ 185 (260)
T 3jxi_A 106 KHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVA 185 (260)
T ss_dssp HHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHH
Confidence 347788899999999988 689999999999999999999999 999999999999999999999
Q ss_pred cCC---------HHHHHHHHHcCCCc
Q 005128 688 FGS---------WEQLRVRLRIQHQH 704 (713)
Q Consensus 688 ~G~---------~eiV~lLL~~GADi 704 (713)
.|+ .+++++|+.+|+++
T Consensus 186 ~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 186 IADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp HCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCchhHHHHHHHHHHHHHHhCccc
Confidence 888 79999999999998
No 61
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.23 E-value=3.4e-11 Score=121.47 Aligned_cols=79 Identities=14% Similarity=0.005 Sum_probs=38.6
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFL 706 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~ 706 (713)
+++.|++.|++++..|..|+||||+|+..|+.+++++|++.|++++. +..|+||||+|+..|+.+++++|++.|+++..
T Consensus 51 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 129 (261)
T 2xai_A 51 CVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDH 129 (261)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 33444444555554555555555555555555555555555554442 23345555555555555555555555554443
No 62
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.23 E-value=1.6e-11 Score=122.68 Aligned_cols=80 Identities=21% Similarity=0.072 Sum_probs=75.2
Q ss_pred HHHHHHHHhCCCCCCcccCC-------------CCcHHHHHHHhCCHHHHHHHHH---cCCCCcccCCCCCcHHHHHHH-
Q 005128 625 EWLVWKIHEGGKGPNVIDDG-------------GQGVVHLAAALGYEWAMRPIIA---TGVSPNFRDARGRTALHWASY- 687 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~~-------------G~TpLHlAA~lG~~~~V~lLL~---~GadvN~rD~~G~TPLH~Aa~- 687 (713)
..+++.|++.|++++..|.. |+||||+||..|+.+++++|+. .|+++|.+|..|+||||+|+.
T Consensus 103 ~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~ 182 (256)
T 2etb_A 103 LQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMI 182 (256)
T ss_dssp HHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHc
Confidence 34678889999999999886 9999999999999999999999 999999999999999999999
Q ss_pred -cCCHH-------HHHHHHHcCCCc
Q 005128 688 -FGSWE-------QLRVRLRIQHQH 704 (713)
Q Consensus 688 -~G~~e-------iV~lLL~~GADi 704 (713)
.|+.+ ++++|+.+|+++
T Consensus 183 ~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 183 ADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCchhhHHHHHHHHHHHHcCCCc
Confidence 88888 999999999998
No 63
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.22 E-value=4.1e-11 Score=123.17 Aligned_cols=93 Identities=19% Similarity=0.089 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH
Q 005128 615 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQL 694 (713)
Q Consensus 615 Lq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV 694 (713)
|+.+.... +..+++.|++.|++++..|..|+||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++
T Consensus 62 L~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 140 (351)
T 3utm_A 62 LHLAAGYN-RVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVC 140 (351)
T ss_dssp HHHHHHTT-CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcC-CHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 44444333 23467788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCccccC
Q 005128 695 RVRLRIQHQHFLEG 708 (713)
Q Consensus 695 ~lLL~~GADi~~~~ 708 (713)
++|+.+|+++...+
T Consensus 141 ~~Ll~~g~~~~~~~ 154 (351)
T 3utm_A 141 SLLLSHGADPTLVN 154 (351)
T ss_dssp HHHHHTTCCTTCCC
T ss_pred HHHHHcCCCCcccc
Confidence 99999999988654
No 64
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.22 E-value=3e-11 Score=130.82 Aligned_cols=75 Identities=21% Similarity=0.215 Sum_probs=48.0
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQ 701 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~G 701 (713)
+++.|++.|+++|..|..|+||||+|+..|+..++++|+..|++++.+|..|+||||+|+..|+.++|++|+.++
T Consensus 250 iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 250 ACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 455566666666666666666666666666666666666666666666666666666666666666666666554
No 65
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.21 E-value=2.8e-11 Score=130.19 Aligned_cols=84 Identities=14% Similarity=0.069 Sum_probs=78.5
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|+||||+|+..|+.+++++|+..|+++|.+|..|+||||+|+..|+.++|++|+++||++.
T Consensus 292 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~ 371 (437)
T 1n11_A 292 PVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPN 371 (437)
T ss_dssp HHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCC
Confidence 46677788899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 372 ~~~~ 375 (437)
T 1n11_A 372 EVSS 375 (437)
T ss_dssp CCCS
T ss_pred CCCC
Confidence 7654
No 66
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.21 E-value=1.6e-11 Score=129.06 Aligned_cols=81 Identities=16% Similarity=0.204 Sum_probs=42.0
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCC-----CcccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS-----PNFRDARGRTALHWASYFGSWEQLRVRLRIQ 701 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~Gad-----vN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~G 701 (713)
+++.|++.|++++..|..|+||||+||..|+.+++++|+..|++ +|.+|..|+||||+|+..|+.++|++|+++|
T Consensus 155 ~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 234 (364)
T 3ljn_A 155 MIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMG 234 (364)
T ss_dssp HHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTT
T ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 33444444555555555555555555555555555555555554 5555555555555555555555555555555
Q ss_pred CCcccc
Q 005128 702 HQHFLE 707 (713)
Q Consensus 702 ADi~~~ 707 (713)
|++..+
T Consensus 235 ad~~~~ 240 (364)
T 3ljn_A 235 IDVNME 240 (364)
T ss_dssp CCTTCC
T ss_pred CCCCCC
Confidence 555443
No 67
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.21 E-value=6.1e-11 Score=109.28 Aligned_cols=82 Identities=18% Similarity=0.261 Sum_probs=74.6
Q ss_pred HHHHHHhC-CCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 627 LVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 627 LvekLle~-Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.++.+++. +.+++..|..|.||||+ |..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+|+++.
T Consensus 17 ~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 95 (156)
T 1bd8_A 17 EVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN 95 (156)
T ss_dssp HHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 45556655 55899999999999999 99999999999999999999999999999999999999999999999999988
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 96 ~~~~ 99 (156)
T 1bd8_A 96 VPDG 99 (156)
T ss_dssp CCCT
T ss_pred CcCC
Confidence 7654
No 68
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.20 E-value=2.1e-11 Score=107.74 Aligned_cols=72 Identities=22% Similarity=0.236 Sum_probs=64.7
Q ss_pred CCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 638 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 638 ~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
+...|.+|.|+||+||..|+..++++|+..|++++.+|..|+||||+|+..|+.+++++|+..|+++..+++
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 88 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK 88 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc
Confidence 345789999999999999999999999999999999999999999999999999999999999999987654
No 69
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.20 E-value=3.5e-11 Score=121.30 Aligned_cols=83 Identities=12% Similarity=-0.023 Sum_probs=77.9
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|+++|. |..|+||||+|+..|+.++|++|+++||++.
T Consensus 115 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~ 193 (261)
T 2xai_A 115 ECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQ 193 (261)
T ss_dssp HHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 467888899999999999999999999999999999999999999995 8999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 194 ~~d~ 197 (261)
T 2xai_A 194 AKNA 197 (261)
T ss_dssp CCCT
T ss_pred CcCC
Confidence 7654
No 70
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.20 E-value=5.3e-11 Score=117.36 Aligned_cols=80 Identities=15% Similarity=0.069 Sum_probs=61.1
Q ss_pred HHHHHHHhCCCCCCcccC-CCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 626 WLVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~-~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
.+++.|++.|++++..+. .|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+||+.
T Consensus 131 ~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 131 GIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp HHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence 356666777777777776 7777777777777777777777777777777777777777777777777777777777765
Q ss_pred c
Q 005128 705 F 705 (713)
Q Consensus 705 ~ 705 (713)
.
T Consensus 211 ~ 211 (236)
T 1ikn_D 211 L 211 (236)
T ss_dssp G
T ss_pred h
Confidence 5
No 71
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.20 E-value=4.7e-11 Score=116.96 Aligned_cols=84 Identities=18% Similarity=0.041 Sum_probs=76.7
Q ss_pred HHHHHHHhC-CCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCC-----cccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005128 626 WLVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSP-----NFRDARGRTALHWASYFGSWEQLRVRLR 699 (713)
Q Consensus 626 wLvekLle~-Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~Gadv-----N~rD~~G~TPLH~Aa~~G~~eiV~lLL~ 699 (713)
.+++.|++. |++++..|..|+||||+||..|+.+++++|+..|+++ +.+|..|+||||+|+..|+.+++++|++
T Consensus 17 ~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 96 (232)
T 2rfa_A 17 QALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLA 96 (232)
T ss_dssp HHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHh
Confidence 356677776 9999999999999999999999999999999999987 6788899999999999999999999999
Q ss_pred cCCCccccCc
Q 005128 700 IQHQHFLEGK 709 (713)
Q Consensus 700 ~GADi~~~~k 709 (713)
+|+++..+.+
T Consensus 97 ~g~~~~~~~~ 106 (232)
T 2rfa_A 97 RGASVSARAT 106 (232)
T ss_dssp TTCCTTCCCC
T ss_pred CCCCCCcccC
Confidence 9999987643
No 72
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.20 E-value=7e-11 Score=115.74 Aligned_cols=80 Identities=21% Similarity=0.185 Sum_probs=74.2
Q ss_pred HHHHHHHhCCCCCCcccC-------------CCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005128 626 WLVWKIHEGGKGPNVIDD-------------GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWE 692 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~-------------~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~e 692 (713)
.+++.|++.|++++..+. .|.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 89 ~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~ 168 (232)
T 2rfa_A 89 NLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKT 168 (232)
T ss_dssp HHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHH
T ss_pred HHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChH
Confidence 367788889999998765 7999999999999999999999999999999999999999999999999
Q ss_pred HH----HHHHHcCCCcc
Q 005128 693 QL----RVRLRIQHQHF 705 (713)
Q Consensus 693 iV----~lLL~~GADi~ 705 (713)
++ ++|+..|++..
T Consensus 169 ~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 169 FACQMYNLLLSYDGGDH 185 (232)
T ss_dssp HHHHHHHHHHHTTCSCS
T ss_pred HHHHHHHHHHhcCCchh
Confidence 88 99999999873
No 73
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.19 E-value=8.6e-11 Score=114.78 Aligned_cols=84 Identities=19% Similarity=0.231 Sum_probs=71.3
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+..|+++.
T Consensus 87 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 166 (231)
T 3aji_A 87 EIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN 166 (231)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc
Confidence 46677788888888888888888888888888888888888888888888888888888888888888888888888887
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 167 ~~~~ 170 (231)
T 3aji_A 167 IQDT 170 (231)
T ss_dssp CCCT
T ss_pred ccCC
Confidence 6553
No 74
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.19 E-value=1.7e-11 Score=128.23 Aligned_cols=78 Identities=19% Similarity=0.063 Sum_probs=74.7
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
.+++.|++.|+++|..|..|+||||+||..|+..++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+|++
T Consensus 207 ~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 207 PLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 467778888999999999999999999999999999999999999999999999999999999999999999999887
No 75
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.19 E-value=9.4e-11 Score=116.63 Aligned_cols=94 Identities=21% Similarity=0.185 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 005128 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQ 693 (713)
Q Consensus 614 LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~ei 693 (713)
.|+.++... ...+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++
T Consensus 42 ~L~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 120 (285)
T 1wdy_A 42 PLHNAVQMS-REDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120 (285)
T ss_dssp HHHHHHHTT-CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHH
T ss_pred HHHHHHHcC-CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHH
Confidence 444444433 2346677888888888888889999999999999999999999999998888899999999999999999
Q ss_pred HHHHHHcCCCccccC
Q 005128 694 LRVRLRIQHQHFLEG 708 (713)
Q Consensus 694 V~lLL~~GADi~~~~ 708 (713)
+++|+..|+++..+.
T Consensus 121 ~~~Ll~~g~~~~~~~ 135 (285)
T 1wdy_A 121 LKFLYKRGANVNLRR 135 (285)
T ss_dssp HHHHHHTTCCTTCCC
T ss_pred HHHHHHhCCCccccc
Confidence 999999988887654
No 76
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.19 E-value=8e-11 Score=114.52 Aligned_cols=84 Identities=20% Similarity=0.202 Sum_probs=78.2
Q ss_pred HHHHHHHhCC--CCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcC-C
Q 005128 626 WLVWKIHEGG--KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQ-H 702 (713)
Q Consensus 626 wLvekLle~G--ad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~G-A 702 (713)
.+++.|++.| ++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+..| +
T Consensus 86 ~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 165 (228)
T 2dzn_A 86 EVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKS 165 (228)
T ss_dssp HHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred HHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 4677888888 888999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred CccccCc
Q 005128 703 QHFLEGK 709 (713)
Q Consensus 703 Di~~~~k 709 (713)
++..+++
T Consensus 166 ~~~~~d~ 172 (228)
T 2dzn_A 166 AVNWQDK 172 (228)
T ss_dssp CSCCCCT
T ss_pred cccCcCC
Confidence 8877653
No 77
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.18 E-value=1.9e-11 Score=120.53 Aligned_cols=83 Identities=20% Similarity=0.218 Sum_probs=75.7
Q ss_pred HHHHHHhCCCC------CCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcCCHHHHHHHHH
Q 005128 627 LVWKIHEGGKG------PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA-RGRTALHWASYFGSWEQLRVRLR 699 (713)
Q Consensus 627 LvekLle~Gad------~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~-~G~TPLH~Aa~~G~~eiV~lLL~ 699 (713)
+++.|++.|++ ++..+..|.||||+|+..|+..++++|+..|++++.+|. .|+||||+|+..|+.++|++|+.
T Consensus 93 ~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 172 (236)
T 1ikn_D 93 SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLK 172 (236)
T ss_dssp HHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 56677777766 467788999999999999999999999999999999998 99999999999999999999999
Q ss_pred cCCCccccCc
Q 005128 700 IQHQHFLEGK 709 (713)
Q Consensus 700 ~GADi~~~~k 709 (713)
+|+++..+++
T Consensus 173 ~ga~~~~~~~ 182 (236)
T 1ikn_D 173 CGADVNRVTY 182 (236)
T ss_dssp TTCCSCCCCT
T ss_pred cCCCCCcccC
Confidence 9999987654
No 78
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=99.18 E-value=6.3e-11 Score=110.63 Aligned_cols=84 Identities=26% Similarity=0.404 Sum_probs=76.3
Q ss_pred eEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCC-CCCceeEEEEEeCCccc
Q 005128 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRLA 517 (713)
Q Consensus 439 fsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~pG~V~l~Vt~~n~~~ 517 (713)
..|+.++|+.|+..||+.|+|+|.+|.+ ++.|+||+..+=.++|....|||++|| |.||.|.|.++..++.-
T Consensus 6 P~I~~i~P~eG~~~GG~~V~I~G~nF~~-------GlqV~FG~t~~w~e~itphairv~~PP~~~pG~V~VTl~~k~kqf 78 (138)
T 3muj_A 6 PCIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQF 78 (138)
T ss_dssp CEEEEEESSEEETTCCCEEEEEEESCCT-------TCEEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEEE
T ss_pred CceeEecCCCCCccCCeEEEEeCCCccc-------CCEEEECCeeeeeeeecccceEEECCCCCCCCceEEEEeecCccc
Confidence 3799999999999999999999999965 899999999999999999999999999 99999999999988888
Q ss_pred cccc-eeeeecCC
Q 005128 518 CSEV-REFEYREK 529 (713)
Q Consensus 518 cSev-~eFEYr~~ 529 (713)
|... ..|.|-.-
T Consensus 79 ~~g~p~~F~Y~~l 91 (138)
T 3muj_A 79 CKGAPGRFVYTAL 91 (138)
T ss_dssp CTTSCEEEEEECC
T ss_pred ccCCCceEEEecC
Confidence 7654 67888763
No 79
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.17 E-value=7.2e-11 Score=118.29 Aligned_cols=84 Identities=20% Similarity=0.217 Sum_probs=77.9
Q ss_pred HHHHHHHhCCC-CCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 626 WLVWKIHEGGK-GPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 626 wLvekLle~Ga-d~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
.+++.|++.+. +++..+..|.||||+|+..|+..++++|+..|++++.+|..|+||||+|+..|+.+++++|++.|+++
T Consensus 104 ~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 183 (253)
T 1yyh_A 104 GVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK 183 (253)
T ss_dssp HHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 35677778776 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCc
Q 005128 705 FLEGK 709 (713)
Q Consensus 705 ~~~~k 709 (713)
..+++
T Consensus 184 ~~~~~ 188 (253)
T 1yyh_A 184 DMQNN 188 (253)
T ss_dssp TCCCT
T ss_pred CCcCC
Confidence 87654
No 80
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.17 E-value=3.8e-11 Score=121.23 Aligned_cols=81 Identities=19% Similarity=0.088 Sum_probs=75.9
Q ss_pred HHHHHHHHhCCCCCCcccC--------------CCCcHHHHHHHhCCHHHHHHHHH---cCCCCcccCCCCCcHHHHHHH
Q 005128 625 EWLVWKIHEGGKGPNVIDD--------------GGQGVVHLAAALGYEWAMRPIIA---TGVSPNFRDARGRTALHWASY 687 (713)
Q Consensus 625 ewLvekLle~Gad~N~~D~--------------~G~TpLHlAA~lG~~~~V~lLL~---~GadvN~rD~~G~TPLH~Aa~ 687 (713)
.-+++.|++.|++++..+. .|.||||+||..|+.+++++|+. .|++++.+|..|+||||+|+.
T Consensus 114 ~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~ 193 (273)
T 2pnn_A 114 MTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVE 193 (273)
T ss_dssp HHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHH
Confidence 3467888899999999987 79999999999999999999999 999999999999999999999
Q ss_pred cCC---------HHHHHHHHHcCCCcc
Q 005128 688 FGS---------WEQLRVRLRIQHQHF 705 (713)
Q Consensus 688 ~G~---------~eiV~lLL~~GADi~ 705 (713)
.|+ .+++++|+.+|+++.
T Consensus 194 ~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 194 VADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp HCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 998 899999999999985
No 81
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.17 E-value=6e-11 Score=121.76 Aligned_cols=84 Identities=19% Similarity=0.183 Sum_probs=77.0
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..+..|.||||+|+..++..++++|+..|+++|.+|..|+||||+||..|+.++|++||++|+++.
T Consensus 100 ~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn 179 (269)
T 4b93_B 100 DLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASIN 179 (269)
T ss_dssp THHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT
T ss_pred HHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 35677888899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 180 ~~~~ 183 (269)
T 4b93_B 180 ASNN 183 (269)
T ss_dssp CBCT
T ss_pred cccc
Confidence 7553
No 82
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.17 E-value=1.1e-10 Score=121.51 Aligned_cols=96 Identities=26% Similarity=0.299 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhCCHHHHHHHHHcCCCC--------------------
Q 005128 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIATGVSP-------------------- 671 (713)
Q Consensus 613 ~LLq~lLk~kl~ewLvekLle~Gad~N~~D~-~G~TpLHlAA~lG~~~~V~lLL~~Gadv-------------------- 671 (713)
..|..+++.. ..-+++.|++.|+++|..+. .|+||||+||..|+.++|++|+++|+++
T Consensus 27 t~L~~Av~~g-~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~ 105 (337)
T 4g8k_A 27 HLLIKAVQNE-DVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSV 105 (337)
T ss_dssp HHHHHHHHTT-CHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred hHHHHHHHcC-CHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccc
Confidence 3444444443 33477888999999998875 5999999999999999999999998765
Q ss_pred -------------cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 672 -------------NFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 672 -------------N~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
+.+|..|+||||+|+..|+.+++++|+..|+++.++.+
T Consensus 106 ~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~ 156 (337)
T 4g8k_A 106 KLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK 156 (337)
T ss_dssp HHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred hhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhc
Confidence 45678899999999999999999999999999887544
No 83
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.16 E-value=1.1e-10 Score=119.77 Aligned_cols=79 Identities=20% Similarity=0.166 Sum_probs=50.7
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
+++.|++.|++++..|..|+||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.++|++|+..|+++.
T Consensus 74 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 152 (285)
T 3d9h_A 74 SLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ 152 (285)
T ss_dssp HHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC
Confidence 4445555666666666666666666666666666666666666666666666666666666666666666666666654
No 84
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.16 E-value=1.4e-10 Score=112.67 Aligned_cols=80 Identities=11% Similarity=0.011 Sum_probs=76.0
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.+++++|+++|+...
T Consensus 139 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 139 DAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred HHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 46778888999999999999999999999999999999999999999999999999999999999999999999999754
No 85
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.16 E-value=1.3e-10 Score=111.03 Aligned_cols=84 Identities=14% Similarity=0.092 Sum_probs=70.1
Q ss_pred HHHHHHH-hCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCC-----HHHHHHHH
Q 005128 626 WLVWKIH-EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGS-----WEQLRVRL 698 (713)
Q Consensus 626 wLvekLl-e~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~G-advN~rD~~G~TPLH~Aa~~G~-----~eiV~lLL 698 (713)
.+++.|+ ..+.+++..|..|.||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+..|+ .+++++|+
T Consensus 86 ~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll 165 (201)
T 3hra_A 86 EILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLM 165 (201)
T ss_dssp HHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHH
Confidence 3555566 567788888888888888888888888888888888 8888888888899998888887 88888888
Q ss_pred HcCCCccccCc
Q 005128 699 RIQHQHFLEGK 709 (713)
Q Consensus 699 ~~GADi~~~~k 709 (713)
++|+++..+++
T Consensus 166 ~~ga~~~~~~~ 176 (201)
T 3hra_A 166 ENGADQSIKDN 176 (201)
T ss_dssp HTTCCTTCCCT
T ss_pred HCCCCCCccCC
Confidence 88888887765
No 86
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.16 E-value=1.1e-10 Score=119.82 Aligned_cols=83 Identities=12% Similarity=-0.015 Sum_probs=77.9
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
.+++.|++.|++++..|..|+||||+|+..|+.+++++|+..|++++ +|..|+||||+|+..|+.++|++|+..|+++.
T Consensus 171 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 249 (285)
T 3d9h_A 171 ECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQ 249 (285)
T ss_dssp HHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 46778889999999999999999999999999999999999999999 49999999999999999999999999999998
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 250 ~~d~ 253 (285)
T 3d9h_A 250 AKNA 253 (285)
T ss_dssp CCCT
T ss_pred CcCC
Confidence 8664
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.16 E-value=3.7e-11 Score=117.17 Aligned_cols=73 Identities=14% Similarity=-0.065 Sum_probs=65.6
Q ss_pred CCCccc-CCCCcHHHHHHHhCCH----HHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC------HHHHHHHHHcCCCcc
Q 005128 637 GPNVID-DGGQGVVHLAAALGYE----WAMRPIIATGVSPNFRDARGRTALHWASYFGS------WEQLRVRLRIQHQHF 705 (713)
Q Consensus 637 d~N~~D-~~G~TpLHlAA~lG~~----~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~------~eiV~lLL~~GADi~ 705 (713)
+++..+ ..|+||||+|+..|+. .++++|+..|+++|.+|..|+||||+|+..|+ .++|++|+.+||++.
T Consensus 29 ~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin 108 (186)
T 3t8k_A 29 GYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT 108 (186)
T ss_dssp SSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS
T ss_pred CcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC
Confidence 355566 7899999999999985 48999999999999999999999999999998 688999999999999
Q ss_pred ccCc
Q 005128 706 LEGK 709 (713)
Q Consensus 706 ~~~k 709 (713)
.+++
T Consensus 109 ~~d~ 112 (186)
T 3t8k_A 109 ALYK 112 (186)
T ss_dssp SCBG
T ss_pred ccCC
Confidence 8765
No 88
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.15 E-value=8.5e-11 Score=120.42 Aligned_cols=76 Identities=22% Similarity=0.126 Sum_probs=72.2
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIA-TGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQ 701 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~-~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~G 701 (713)
.+++.|++.|+++|..|..|+||||+||..|+.+++++|+. .|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 197 ~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 197 DVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 36778889999999999999999999999999999999999 89999999999999999999999999999999864
No 89
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.15 E-value=3.4e-11 Score=106.01 Aligned_cols=70 Identities=24% Similarity=0.243 Sum_probs=66.4
Q ss_pred cccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 640 VIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 640 ~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
..|.+|+||||+||..|...++++|+..|++++.+|..|+||||+|+..|+.+++++|+..|+++..+++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~ 73 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSK 73 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCC
Confidence 4689999999999999999999999999999999999999999999999999999999999999987654
No 90
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.15 E-value=4.4e-11 Score=122.92 Aligned_cols=79 Identities=15% Similarity=0.107 Sum_probs=60.2
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARG-RTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G-~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
.+++.|++.|++++..|..|+||||+||..|+.+++++|+..|++++.+|..| .||||+|+..|+.+++++|+..|++.
T Consensus 76 ~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 76 KIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred HHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 35566777777777777777777777777777777777777777777777777 57777777777777777777777765
No 91
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.15 E-value=1.8e-11 Score=122.68 Aligned_cols=83 Identities=17% Similarity=0.057 Sum_probs=77.5
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccC-CCCCcHHHHH--HHcCCHHHHHHHHHcCC
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWA--SYFGSWEQLRVRLRIQH 702 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD-~~G~TPLH~A--a~~G~~eiV~lLL~~GA 702 (713)
.+++.|++.|+++|..|..|+||||+||..|+.+++++|+..|++++.+| ..|+||||+| +..|+.+++++|+..|+
T Consensus 68 ~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga 147 (229)
T 2vge_A 68 SIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQ 147 (229)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCC
Confidence 46777888999999999999999999999999999999999999999987 6999999999 99999999999999999
Q ss_pred CccccC
Q 005128 703 QHFLEG 708 (713)
Q Consensus 703 Di~~~~ 708 (713)
++..++
T Consensus 148 ~~~~~~ 153 (229)
T 2vge_A 148 SMGLMN 153 (229)
T ss_dssp HTTTSG
T ss_pred Cccccc
Confidence 987754
No 92
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.15 E-value=8.8e-11 Score=117.44 Aligned_cols=77 Identities=18% Similarity=0.097 Sum_probs=71.0
Q ss_pred hCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 633 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR-GRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 633 e~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~-G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
..+.+++..|..|.||||+||..|+..++++|+..|++++.++.. |+||||+|+..|+.++|++|+.+|+++..+++
T Consensus 146 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~ 223 (282)
T 1oy3_D 146 DWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY 223 (282)
T ss_dssp CGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred hhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccc
Confidence 345668889999999999999999999999999999999999865 99999999999999999999999999988754
No 93
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.15 E-value=4.8e-11 Score=119.12 Aligned_cols=69 Identities=14% Similarity=0.185 Sum_probs=64.7
Q ss_pred ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCC-------------CCcHHHHHHHcCCHHHHHHHHH---cCCCc
Q 005128 641 IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR-------------GRTALHWASYFGSWEQLRVRLR---IQHQH 704 (713)
Q Consensus 641 ~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~-------------G~TPLH~Aa~~G~~eiV~lLL~---~GADi 704 (713)
.|..|+||||+||..|+.+++++|++.|++++.+|.. |+||||+|+..|+.++|++|++ .|+++
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~ 165 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL 165 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc
Confidence 3478999999999999999999999999999999987 9999999999999999999999 99999
Q ss_pred cccCc
Q 005128 705 FLEGK 709 (713)
Q Consensus 705 ~~~~k 709 (713)
..+++
T Consensus 166 n~~d~ 170 (256)
T 2etb_A 166 EATDS 170 (256)
T ss_dssp TCCCT
T ss_pred CccCC
Confidence 87654
No 94
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.15 E-value=3.5e-11 Score=121.46 Aligned_cols=82 Identities=17% Similarity=0.104 Sum_probs=73.1
Q ss_pred HHHHHHHHh---CCCCCCcccCCCCcHHHHHHHhCC---------HHHHHHHHHcCCCCc-------ccCCCCCcHHHHH
Q 005128 625 EWLVWKIHE---GGKGPNVIDDGGQGVVHLAAALGY---------EWAMRPIIATGVSPN-------FRDARGRTALHWA 685 (713)
Q Consensus 625 ewLvekLle---~Gad~N~~D~~G~TpLHlAA~lG~---------~~~V~lLL~~GadvN-------~rD~~G~TPLH~A 685 (713)
..+++.|++ .|++++.+|..|+||||+||..|+ ..++++|+..|+++| .+|..|+||||+|
T Consensus 161 ~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 161 LAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence 346788889 899999999999999999999998 789999999999997 4899999999999
Q ss_pred HHcCCHHHHHHHHHcCC-Cccc
Q 005128 686 SYFGSWEQLRVRLRIQH-QHFL 706 (713)
Q Consensus 686 a~~G~~eiV~lLL~~GA-Di~~ 706 (713)
+..|+.++|++|+++|| |...
T Consensus 241 ~~~g~~~iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 241 ASSGKIGVLAYILQREIHEPEC 262 (273)
T ss_dssp HHTTCHHHHHHHHHHHTC----
T ss_pred HHhChHHHHHHHHHCCCCCchh
Confidence 99999999999999999 6554
No 95
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.14 E-value=1.7e-10 Score=110.29 Aligned_cols=95 Identities=14% Similarity=0.054 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHH-HcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005128 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPII-ATGVSPNFRDARGRTALHWASYFGSWE 692 (713)
Q Consensus 614 LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL-~~GadvN~rD~~G~TPLH~Aa~~G~~e 692 (713)
.|..++... ...+++.|++.|++++..|..|.||||+|+..|+.+++++|+ ..+++++.+|..|+||||+|+..|+.+
T Consensus 42 ~L~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 120 (201)
T 3hra_A 42 PLNIAVHNN-DIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHID 120 (201)
T ss_dssp HHHHHHHHT-CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHH
T ss_pred HHHHHHHcC-CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHH
Confidence 444454443 344778888999999999999999999999999999999999 577899999999999999999999999
Q ss_pred HHHHHHHcC-CCccccCc
Q 005128 693 QLRVRLRIQ-HQHFLEGK 709 (713)
Q Consensus 693 iV~lLL~~G-ADi~~~~k 709 (713)
++++|+..| +++..+++
T Consensus 121 ~v~~Ll~~g~~~~~~~~~ 138 (201)
T 3hra_A 121 NVKLLLEDGREDIDFQND 138 (201)
T ss_dssp HHHHHHHHCCCCTTCCCT
T ss_pred HHHHHHHcCCCCcCCCCC
Confidence 999999999 88877654
No 96
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.14 E-value=1.3e-10 Score=125.11 Aligned_cols=79 Identities=20% Similarity=0.237 Sum_probs=40.3
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 005128 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHF 705 (713)
Q Consensus 627 LvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~ 705 (713)
+++.|++.|+++|..|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.++|+.|+..+++..
T Consensus 62 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 140 (437)
T 1n11_A 62 VAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQA 140 (437)
T ss_dssp HHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc
Confidence 3444444455555555555555555555555555555555555555555555555555555555555555555554443
No 97
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.13 E-value=4.8e-11 Score=125.48 Aligned_cols=82 Identities=11% Similarity=0.079 Sum_probs=76.1
Q ss_pred HHHHHHHHhCCCC-----CCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005128 625 EWLVWKIHEGGKG-----PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLR 699 (713)
Q Consensus 625 ewLvekLle~Gad-----~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~ 699 (713)
..+++.|++.|++ +|..|..|.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.++|++|+.
T Consensus 186 ~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 265 (364)
T 3ljn_A 186 REALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQ 265 (364)
T ss_dssp HHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHH
Confidence 3467778888888 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccc
Q 005128 700 IQHQHFL 706 (713)
Q Consensus 700 ~GADi~~ 706 (713)
+|++..+
T Consensus 266 ~~~~~~~ 272 (364)
T 3ljn_A 266 KTDVFLI 272 (364)
T ss_dssp HSCHHHH
T ss_pred cCCchhh
Confidence 9987643
No 98
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.12 E-value=9.5e-11 Score=117.02 Aligned_cols=74 Identities=12% Similarity=0.034 Sum_probs=67.9
Q ss_pred CCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccC--------------CCCCcHHHHHHHcCCHHHHHHHHH--
Q 005128 636 KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD--------------ARGRTALHWASYFGSWEQLRVRLR-- 699 (713)
Q Consensus 636 ad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD--------------~~G~TPLH~Aa~~G~~eiV~lLL~-- 699 (713)
...+..|..|+||||+||..|+.+++++|++.|++++.+| ..|+||||+|+..|+.++|++|+.
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 4455567799999999999999999999999999999999 689999999999999999999999
Q ss_pred -cCCCccccCc
Q 005128 700 -IQHQHFLEGK 709 (713)
Q Consensus 700 -~GADi~~~~k 709 (713)
.|+++..+++
T Consensus 164 ~~ga~~~~~d~ 174 (260)
T 3jxi_A 164 HKQADLRRQDS 174 (260)
T ss_dssp SCCCCTTCCCT
T ss_pred ccCCCCcccCC
Confidence 9999988664
No 99
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.12 E-value=2.4e-10 Score=115.98 Aligned_cols=76 Identities=26% Similarity=0.286 Sum_probs=69.8
Q ss_pred CCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 634 GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 634 ~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
........+..|.||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.++|++|+.+||++.++++
T Consensus 188 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~ 263 (299)
T 1s70_B 188 GHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK 263 (299)
T ss_dssp TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCC
Confidence 3444456788999999999999999999999999999999999999999999999999999999999999988764
No 100
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.11 E-value=4.1e-11 Score=119.66 Aligned_cols=82 Identities=16% Similarity=0.014 Sum_probs=76.3
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCC-cHHHHH--HHcCCHHHHHHHHHcCC
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR-TALHWA--SYFGSWEQLRVRLRIQH 702 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~-TPLH~A--a~~G~~eiV~lLL~~GA 702 (713)
.+++.|++.|+++|..|..|+||||+||..|+..++++|+.+|++++.+|..|. ||||+| +..|+.+|+++|+.+|+
T Consensus 84 ~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a 163 (239)
T 1ycs_B 84 EIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE 163 (239)
T ss_dssp HHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhh
Confidence 466778888999999999999999999999999999999999999999998887 999999 78899999999999999
Q ss_pred Ccccc
Q 005128 703 QHFLE 707 (713)
Q Consensus 703 Di~~~ 707 (713)
++.+.
T Consensus 164 ~~~~~ 168 (239)
T 1ycs_B 164 KMGIM 168 (239)
T ss_dssp HTTTT
T ss_pred ccccc
Confidence 88764
No 101
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.10 E-value=3.8e-10 Score=110.41 Aligned_cols=83 Identities=23% Similarity=0.226 Sum_probs=67.1
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCC----CCcccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 005128 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGV----SPNFRDARGRTALHWASYFGSWEQLRVRLRIQ 701 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~Ga----dvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~G 701 (713)
.+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|+ +++.+|..|+||||+|+..|+.+++++|+..|
T Consensus 60 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 139 (241)
T 1k1a_A 60 SVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG 139 (241)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 46677777888888888888888888888888888888888776 77778888888888888888888888888888
Q ss_pred CCccccC
Q 005128 702 HQHFLEG 708 (713)
Q Consensus 702 ADi~~~~ 708 (713)
+++..+.
T Consensus 140 ~~~~~~~ 146 (241)
T 1k1a_A 140 ADIDAVD 146 (241)
T ss_dssp CCTTCCC
T ss_pred CCccccc
Confidence 8877654
No 102
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.10 E-value=6.7e-11 Score=124.11 Aligned_cols=83 Identities=14% Similarity=0.108 Sum_probs=74.2
Q ss_pred HHHHHHHhCCCCCCc-ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC---HHHHHHHHHcC
Q 005128 626 WLVWKIHEGGKGPNV-IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGS---WEQLRVRLRIQ 701 (713)
Q Consensus 626 wLvekLle~Gad~N~-~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~---~eiV~lLL~~G 701 (713)
.+++.+++.|+++|. .|..|+||||+||..|+.++|++|++.|++++.+|..|+||||+|+..|+ .+++..|+..+
T Consensus 111 ~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~ 190 (327)
T 1sw6_A 111 EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL 190 (327)
T ss_dssp HHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhh
Confidence 466778889999999 89999999999999999999999999999999999999999999999999 67788888776
Q ss_pred -CCccccC
Q 005128 702 -HQHFLEG 708 (713)
Q Consensus 702 -ADi~~~~ 708 (713)
+++..++
T Consensus 191 ~~~~~~~d 198 (327)
T 1sw6_A 191 YPCLILED 198 (327)
T ss_dssp GGGGGEEC
T ss_pred hccccCCC
Confidence 5565544
No 103
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.09 E-value=4.4e-10 Score=110.19 Aligned_cols=95 Identities=19% Similarity=0.229 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCCHH
Q 005128 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGSWE 692 (713)
Q Consensus 614 LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~G-advN~rD~~G~TPLH~Aa~~G~~e 692 (713)
.|..++... ...+++.|++.|++++..+..|.||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+..|+.+
T Consensus 47 ~L~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 125 (237)
T 3b7b_A 47 PLMEAAENN-HLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVD 125 (237)
T ss_dssp HHHHHHHTT-CHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHhC-CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHH
Confidence 344444433 234677788889988888889999999999999999999999988 888888999999999999999999
Q ss_pred HHHHHHHcCCCccccCc
Q 005128 693 QLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 693 iV~lLL~~GADi~~~~k 709 (713)
++++|+..|+++..+++
T Consensus 126 ~~~~Ll~~g~~~~~~~~ 142 (237)
T 3b7b_A 126 LVKLLLSKGSDINIRDN 142 (237)
T ss_dssp HHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHCCCCCCccCC
Confidence 99999999998876543
No 104
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.09 E-value=5.1e-11 Score=116.85 Aligned_cols=83 Identities=18% Similarity=0.177 Sum_probs=66.8
Q ss_pred HHHHHHHhC-CCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 626 WLVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 626 wLvekLle~-Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
.+++.|++. |++++..|..|.||||+||..|+..++++|+..|++++.+|..|+||||+|+..|+.++++.|+..|++.
T Consensus 120 ~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 120 DIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp HHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred HHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 366777887 9999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cccC
Q 005128 705 FLEG 708 (713)
Q Consensus 705 ~~~~ 708 (713)
.++.
T Consensus 200 ~~~~ 203 (222)
T 3ehr_A 200 TLSN 203 (222)
T ss_dssp ----
T ss_pred hccc
Confidence 7654
No 105
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.08 E-value=2e-10 Score=122.49 Aligned_cols=77 Identities=22% Similarity=0.174 Sum_probs=47.1
Q ss_pred HHHHHHhC-CCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 627 LVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 627 LvekLle~-Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
+++.|++. |++++..|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++|++|+.+|++
T Consensus 294 ~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 294 IVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred HHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 44444543 366666666666666666666666666666666666666666666666666666666666666666654
No 106
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.06 E-value=2.2e-10 Score=117.75 Aligned_cols=83 Identities=11% Similarity=-0.110 Sum_probs=61.8
Q ss_pred HHHHHHHhCCCCCCcccCCC-CcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 005128 626 WLVWKIHEGGKGPNVIDDGG-QGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQH 704 (713)
Q Consensus 626 wLvekLle~Gad~N~~D~~G-~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi 704 (713)
.+++.|++.|++++..|..| +||||+|+..|+.+++++|+..|+++... ..|+||||+|+..|+.++|++|+.+|+++
T Consensus 109 ~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~ 187 (285)
T 3kea_A 109 QTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTST 187 (285)
T ss_dssp HHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCC
Confidence 45666777788888777777 68888888888888888888887766322 27778888888888888888888888777
Q ss_pred cccCc
Q 005128 705 FLEGK 709 (713)
Q Consensus 705 ~~~~k 709 (713)
..+++
T Consensus 188 n~~~~ 192 (285)
T 3kea_A 188 NTNNS 192 (285)
T ss_dssp CTTCC
T ss_pred CcccC
Confidence 76553
No 107
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.05 E-value=3.1e-10 Score=121.05 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=67.1
Q ss_pred CCcccCCCCcHHHHHHHhCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 638 PNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 638 ~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~G-advN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
.+..|..|.||||+||..|+.+++++|+..| ++++.+|..|+||||+|+..|+.++|++|+.+|+++..+++
T Consensus 272 ~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~ 344 (373)
T 2fo1_E 272 KDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDA 344 (373)
T ss_dssp TSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCS
T ss_pred cCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCC
Confidence 4567889999999999999999999999875 99999999999999999999999999999999999987654
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.05 E-value=3.9e-10 Score=122.07 Aligned_cols=84 Identities=18% Similarity=0.107 Sum_probs=79.0
Q ss_pred HHHHHHHhCCCCCCccc--CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005128 626 WLVWKIHEGGKGPNVID--DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQ 703 (713)
Q Consensus 626 wLvekLle~Gad~N~~D--~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GAD 703 (713)
.+++.|++.|+++|..+ ..|.||||+||..|+..++++|+..|+++|.+|..|+||||+|+..|+.++|++||.+||+
T Consensus 214 ~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad 293 (368)
T 3jue_A 214 PTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD 293 (368)
T ss_dssp HHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCC
Confidence 35677888999999988 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCc
Q 005128 704 HFLEGK 709 (713)
Q Consensus 704 i~~~~k 709 (713)
+.++++
T Consensus 294 ~~~~d~ 299 (368)
T 3jue_A 294 LGARDS 299 (368)
T ss_dssp TTCCCT
T ss_pred CCCcCC
Confidence 988765
No 109
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.05 E-value=2.8e-10 Score=101.48 Aligned_cols=69 Identities=22% Similarity=0.126 Sum_probs=62.5
Q ss_pred ccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 641 IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 641 ~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
.+..|.|+||+|+..|..++++.|+..|++++.+|..|+||||+|+..|+.+++++|+..|+++..+++
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~ 71 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDK 71 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCC
Confidence 356789999999999999999999999999999999999999999999999999999999999987654
No 110
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.03 E-value=1.1e-09 Score=106.40 Aligned_cols=95 Identities=18% Similarity=0.147 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCccc-CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005128 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSWE 692 (713)
Q Consensus 614 LLq~lLk~kl~ewLvekLle~Gad~N~~D-~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~e 692 (713)
.|..++... ...+++.|++.|.+++..+ ..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+
T Consensus 45 ~L~~A~~~~-~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 123 (240)
T 3eu9_A 45 LLHWAAINN-RIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTS 123 (240)
T ss_dssp HHHHHHHTT-CHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHhC-CHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHH
Confidence 444444443 2346778888888887554 44899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccccCc
Q 005128 693 QLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 693 iV~lLL~~GADi~~~~k 709 (713)
++++|+..|+++..+++
T Consensus 124 ~~~~Ll~~~~~~~~~~~ 140 (240)
T 3eu9_A 124 IVAYLIAKGQDVDMMDQ 140 (240)
T ss_dssp HHHHHHHTTCCTTCCCT
T ss_pred HHHHHHhcCCCccccCC
Confidence 99999999998877554
No 111
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.02 E-value=2e-10 Score=120.52 Aligned_cols=74 Identities=19% Similarity=0.187 Sum_probs=67.1
Q ss_pred CCCCcccCCCCcHHHHHHH----hCCHHHHHHHHHcCC------------------------------------------
Q 005128 636 KGPNVIDDGGQGVVHLAAA----LGYEWAMRPIIATGV------------------------------------------ 669 (713)
Q Consensus 636 ad~N~~D~~G~TpLHlAA~----lG~~~~V~lLL~~Ga------------------------------------------ 669 (713)
++++..|..|+||||+||. .|+..++++|++.++
T Consensus 192 ~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~L 271 (327)
T 1sw6_A 192 PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWI 271 (327)
T ss_dssp GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHH
T ss_pred ccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHH
Confidence 5788899999999999999 899999999987743
Q ss_pred ---CCcccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCc
Q 005128 670 ---SPNFRDARGRTALHWASYFGSWEQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 670 ---dvN~rD~~G~TPLH~Aa~~G~~eiV~lLL~~GADi~~~~k 709 (713)
++|.+|..|+||||+||..|+.++|++|+++||++.++++
T Consensus 272 l~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 314 (327)
T 1sw6_A 272 IANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK 314 (327)
T ss_dssp HHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCT
T ss_pred HHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 5888999999999999999999999999999999998765
No 112
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.02 E-value=3.2e-10 Score=114.09 Aligned_cols=78 Identities=24% Similarity=0.254 Sum_probs=71.6
Q ss_pred HHHHHHHhCCCCCCccc-CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH----------------Hc
Q 005128 626 WLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWAS----------------YF 688 (713)
Q Consensus 626 wLvekLle~Gad~N~~D-~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa----------------~~ 688 (713)
.+++.|++.|+++|..| ..|+||||+||..|+..++++|+.+|++++.+|..|+||||+|+ ..
T Consensus 91 ~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~ 170 (244)
T 3ui2_A 91 KCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRI 170 (244)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHc
Confidence 46788889999999988 88999999999999999999999999999999999999999888 67
Q ss_pred CCHHHHHHHHHcCCC
Q 005128 689 GSWEQLRVRLRIQHQ 703 (713)
Q Consensus 689 G~~eiV~lLL~~GAD 703 (713)
|+.+++++|+..+.+
T Consensus 171 g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 171 GLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHHHHEE
T ss_pred ChHHHHHHHHHhccc
Confidence 999999999987554
No 113
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.00 E-value=2e-09 Score=104.51 Aligned_cols=96 Identities=27% Similarity=0.359 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC-H
Q 005128 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGS-W 691 (713)
Q Consensus 613 ~LLq~lLk~kl~ewLvekLle~Gad~N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~-~ 691 (713)
..|..++... ...+++.|++.|++++..|..|.||||+|+..|+..++++|+..|++++.+|..|.||||+|+..|+ .
T Consensus 78 t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 156 (240)
T 3eu9_A 78 TPLHWATRQG-HLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSV 156 (240)
T ss_dssp CHHHHHHHHT-CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSS
T ss_pred ChhHHHHHcC-CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChH
Confidence 3444444443 2346788889999999999999999999999999999999999999999999999999999997776 8
Q ss_pred HHHHHHHHcCCCccccCc
Q 005128 692 EQLRVRLRIQHQHFLEGK 709 (713)
Q Consensus 692 eiV~lLL~~GADi~~~~k 709 (713)
+++++|+..|+++..+.+
T Consensus 157 ~~~~~L~~~~~~~~~~~~ 174 (240)
T 3eu9_A 157 DPTRLLLTFNVSVNLGDK 174 (240)
T ss_dssp TTHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHhcCCCcchhhc
Confidence 999999999999987654
No 114
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.96 E-value=1.2e-09 Score=104.48 Aligned_cols=66 Identities=26% Similarity=0.263 Sum_probs=60.3
Q ss_pred HHHHHHHhCCCCCCccc-CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 005128 626 WLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGSW 691 (713)
Q Consensus 626 wLvekLle~Gad~N~~D-~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~rD~~G~TPLH~Aa~~G~~ 691 (713)
.+++.|++.|+++|..| ..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..++.
T Consensus 90 ~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 90 KCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp HHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC
Confidence 46778889999999888 8999999999999999999999999999999999999999999876433
No 115
>3mlp_A Transcription factor COE1; transcription factor, pseudo-IG-fold, TIG-domain, IPT-domain loop-helix; HET: DNA CIT; 2.80A {Mus musculus} PDB: 3n50_A
Probab=98.84 E-value=1.1e-08 Score=107.91 Aligned_cols=88 Identities=25% Similarity=0.372 Sum_probs=76.5
Q ss_pred ceEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCC-CCCceeEEEEEeCCcc
Q 005128 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRL 516 (713)
Q Consensus 438 lfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~pG~V~l~Vt~~n~~ 516 (713)
...|+.++|+.|+.+||+.|+|.|.+|.+ ++.|+||...|-.++|.+..|||++|| |.||.|.|.+...++.
T Consensus 231 tP~IkaIsPnEG~~tGG~tV~IiGenFf~-------GLQVvFGtt~vWselITphAIRV~tPPr~~PGvVdVTLs~ksKq 303 (402)
T 3mlp_A 231 TPCIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVIFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ 303 (402)
T ss_dssp CCEEEECSSCEECTTCCCEEEEEEECCCT-------TCEEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEE
T ss_pred CcceEEecCCCCCccCCeEEEEeCCCccc-------CCEEEEccEeeeeEEecccceEEECCCCCCCCceEEEEEecCcc
Confidence 34899999999999999999999999965 899999999999999999999999999 9999999999998888
Q ss_pred ccc-cceeeeecCCCCC
Q 005128 517 ACS-EVREFEYREKPSK 532 (713)
Q Consensus 517 ~cS-ev~eFEYr~~~~~ 532 (713)
-|- ....|.|-.-..+
T Consensus 304 f~kg~pgrF~YtALneP 320 (402)
T 3mlp_A 304 FCKGTPGRFIYTALNEP 320 (402)
T ss_dssp ESTTSCEEEEEC---CC
T ss_pred cccCCCCceeeecCCCC
Confidence 775 3467888765443
No 116
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.52 E-value=9e-09 Score=111.62 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=43.1
Q ss_pred HHHHHHhCCCCC---CcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcc--cCCCCCcHHHHHH-HcCCHHHHHHHHHc
Q 005128 627 LVWKIHEGGKGP---NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNF--RDARGRTALHWAS-YFGSWEQLRVRLRI 700 (713)
Q Consensus 627 LvekLle~Gad~---N~~D~~G~TpLHlAA~lG~~~~V~lLL~~GadvN~--rD~~G~TPLH~Aa-~~G~~eiV~lLL~~ 700 (713)
+++.|++.|+++ +..+.+ .||||+||..|+.+++++|+..|++++. +|..|+||||+|| ..|+.++|++|+..
T Consensus 143 iv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ 221 (376)
T 2aja_A 143 VLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC 221 (376)
T ss_dssp HHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS
T ss_pred HHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhC
Confidence 455555666432 111222 6666666666666666666666666655 5666666666666 66666666666654
Q ss_pred C
Q 005128 701 Q 701 (713)
Q Consensus 701 G 701 (713)
|
T Consensus 222 g 222 (376)
T 2aja_A 222 P 222 (376)
T ss_dssp H
T ss_pred C
Confidence 4
No 117
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.47 E-value=4.8e-08 Score=105.95 Aligned_cols=80 Identities=13% Similarity=0.001 Sum_probs=62.7
Q ss_pred HHHHHHHhCCCCC---CcccCCCCcHHHHHHHhCCHHHHHHHHHcCCCC---cccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005128 626 WLVWKIHEGGKGP---NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSP---NFRDARGRTALHWASYFGSWEQLRVRLR 699 (713)
Q Consensus 626 wLvekLle~Gad~---N~~D~~G~TpLHlAA~lG~~~~V~lLL~~Gadv---N~rD~~G~TPLH~Aa~~G~~eiV~lLL~ 699 (713)
-+++.|++.|+.. +..+..|.||||+||..|+.++|++|+..|+++ +..+.+ +||||+||..|+.++|++|++
T Consensus 106 e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~ 184 (376)
T 2aja_A 106 SALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCE 184 (376)
T ss_dssp HHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHH
Confidence 4677788887732 234567889999999999999999999999762 322333 999999999999999999999
Q ss_pred cCCCccc
Q 005128 700 IQHQHFL 706 (713)
Q Consensus 700 ~GADi~~ 706 (713)
+|+++..
T Consensus 185 ~ga~~~~ 191 (376)
T 2aja_A 185 LAPTEAT 191 (376)
T ss_dssp SCGGGHH
T ss_pred cCCccch
Confidence 9999543
No 118
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=98.16 E-value=7.3e-06 Score=73.13 Aligned_cols=84 Identities=24% Similarity=0.221 Sum_probs=62.2
Q ss_pred ceEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCc-eEEEeCCeec-c-eEeeecceeeeecCCCC--CceeEEEEEe
Q 005128 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTK-WGCMFGEIEV-P-AEVLTDNVIRCQAPSHA--AGRVPFYITG 512 (713)
Q Consensus 438 lfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~-~~cmFGd~eV-p-aei~q~GVLrC~~PPh~--pG~V~l~Vt~ 512 (713)
...|++|+|..|+. ||+|+|.|++|.... .. ..|.+|.++. + ++......|+|.++|+. .|.|.|+|..
T Consensus 7 ~P~It~i~P~~Gp~--GT~vTI~G~nlg~~~----sdv~~V~vgg~~C~~~~~~~s~~~IvC~~~~~~~~~g~V~V~v~~ 80 (99)
T 1uad_C 7 PPLVTGISPNEGIP--WTKVTIRGENLGTGP----TDLIGLTICGHNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTKS 80 (99)
T ss_dssp CCEEEEEESSEEST--TCEEEEEEECSCSSG----GGEEEEEETTEECGGGCEEEETTEEEEECCCCSSSSCCEEEEETT
T ss_pred CCEEEEEECCCcCC--CCEEEEEEEeCCCCc----ccceEEEECCEEceEeeceeecCEEEEEeCCCCCcceeEEEEECC
Confidence 45899999999988 799999999996531 12 4699999844 3 36788999999998854 5666666632
Q ss_pred CCccccccceeeeecCC
Q 005128 513 SNRLACSEVREFEYREK 529 (713)
Q Consensus 513 ~n~~~cSev~eFEYr~~ 529 (713)
+..+.|.. .|+|.++
T Consensus 81 -~~~~~s~~-~F~y~~P 95 (99)
T 1uad_C 81 -GGRGTSTV-SFKLLKP 95 (99)
T ss_dssp -TEECEESS-CCEECCC
T ss_pred -CCcEEecc-eEEEeCc
Confidence 22344544 7999865
No 119
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.03 E-value=1.3e-05 Score=87.75 Aligned_cols=86 Identities=21% Similarity=0.317 Sum_probs=71.7
Q ss_pred CceEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCCCCC-ceeEEEEEeCCc
Q 005128 437 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAA-GRVPFYITGSNR 515 (713)
Q Consensus 437 qlfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PPh~p-G~V~l~Vt~~n~ 515 (713)
|...|++|+|..|. .||+|+|.|++|... .....|+||+.+....-+.+..|.|.+|.+.+ |.+++.|...+.
T Consensus 16 ~p~~i~~~~P~~g~--~~~~~~i~G~nfg~~----~~~~~v~~~~~~~~v~~~~~~~i~~~vp~~~~~g~~~v~~~~~~~ 89 (430)
T 3tc9_A 16 KPVVISEFSPKEGG--LGTRMLLYGENFGSD----ISKIKVTIGGQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILNDEG 89 (430)
T ss_dssp SCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEEECTTS
T ss_pred CCCEEEEEcCCCCC--CCCEEEEEEEcCCCC----ccceEEEECCEEEEEEEECCCEEEEEeCCCCCCccEEEEEecCCc
Confidence 34589999999999 799999999999752 35789999999888888999999999999998 999999988774
Q ss_pred c----ccccceeeeecCC
Q 005128 516 L----ACSEVREFEYREK 529 (713)
Q Consensus 516 ~----~cSev~eFEYr~~ 529 (713)
. +.+ -..|+|..+
T Consensus 90 ~~~~~~~~-~~~F~y~~~ 106 (430)
T 3tc9_A 90 EEIANTEA-NEKFVYQKK 106 (430)
T ss_dssp CEEEEEEC-SSCCEECCC
T ss_pred ceeeEEEE-eeEEEEEEE
Confidence 3 323 356888754
No 120
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.84 E-value=4.1e-05 Score=83.06 Aligned_cols=86 Identities=20% Similarity=0.315 Sum_probs=70.9
Q ss_pred CceEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCC----eecceEeeecceeeeecCCCCCceeEEEEEe
Q 005128 437 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE----IEVPAEVLTDNVIRCQAPSHAAGRVPFYITG 512 (713)
Q Consensus 437 qlfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd----~eVpaei~q~GVLrC~~PPh~pG~V~l~Vt~ 512 (713)
|...|++|+|..|. .||||+|.|++|... .+...|+||+ .+....-+.+..|.|++|.+.+|.+++.|.-
T Consensus 16 ~~~~~~~~~p~~g~--~~~~~~i~g~nfg~~----~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~vp~~~~g~~~i~v~~ 89 (409)
T 3hrp_A 16 QPVTVESFMPVEGK--LREKVIVKGSNFGTD----KSKVKVYFVDEAAERLSTVIGIDNNTLYCLAPRQLPGGNRIKVIV 89 (409)
T ss_dssp SCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEEECSSCEEEEEEEEEETTEEEEECCSCCSEEEEEEEEE
T ss_pred CCcEEEEEcCCCCC--CCcEEEEEeEcCCCC----ccceEEEECCcccceEEEEEEECCCEEEEEECCCCCCcEEEEEEE
Confidence 45589999999988 799999999999762 3578999999 7776666999999999999999999999988
Q ss_pred CCccccccceeeeecCC
Q 005128 513 SNRLACSEVREFEYREK 529 (713)
Q Consensus 513 ~n~~~cSev~eFEYr~~ 529 (713)
.+..+.++ ..|.|..+
T Consensus 90 ~~~~~~~~-~~F~y~~~ 105 (409)
T 3hrp_A 90 DGKEVTTD-GTFKYEQA 105 (409)
T ss_dssp TTEEEECS-SCEEECCC
T ss_pred CCeeEEEe-eeEEEecc
Confidence 77655443 35887654
No 121
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.79 E-value=4e-05 Score=86.25 Aligned_cols=86 Identities=23% Similarity=0.350 Sum_probs=70.4
Q ss_pred CceEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCCCCC-ceeEEEEEeCCc
Q 005128 437 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAA-GRVPFYITGSNR 515 (713)
Q Consensus 437 qlfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PPh~p-G~V~l~Vt~~n~ 515 (713)
|...|++|+|..|.. ||+|+|.|++|... .+...|+||+.+....-+.+..|.|.+|.|.. |.+++.|..+..
T Consensus 16 ~p~~i~~~~P~~G~~--~t~~~I~G~nFg~d----~~~i~V~~~~~~a~v~~~~~~~i~~~vp~~~~~G~~~v~v~~~~~ 89 (496)
T 3kya_A 16 KPVAISDFTPKEGGA--YQKLLIYGENFGTD----VSKVKVKIGGKDAIVINVKSTYVYCFVPSGAFSGEIEITVGEGEN 89 (496)
T ss_dssp SCCEEEEEECSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEESCGGG
T ss_pred CCcEEEEEcCCCCCC--CCEEEEEeecCCCC----cceeEEEECCEEEEEEEECCCEEEEEECCCCCCCcEEEEEEecCC
Confidence 445899999999998 79999999999763 36899999998777666889999999999888 999999987653
Q ss_pred --cccccceeeeecCC
Q 005128 516 --LACSEVREFEYREK 529 (713)
Q Consensus 516 --~~cSev~eFEYr~~ 529 (713)
.+.++ ..|+|..+
T Consensus 90 ~~~~~~~-~~F~Y~~~ 104 (496)
T 3kya_A 90 AVTTTAS-TTFSYEKK 104 (496)
T ss_dssp CEEEECS-SCCEECCC
T ss_pred ceEEEec-ceEEEEEE
Confidence 23343 56998643
No 122
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=97.54 E-value=8.9e-05 Score=87.08 Aligned_cols=94 Identities=19% Similarity=0.182 Sum_probs=60.6
Q ss_pred ceEEEeecCCCccCCCCeEEEEEeccccCCCC--CCCCceEEEeCCeecce--EeeecceeeeecCCCCCceeEEEEEeC
Q 005128 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKL--SSDTKWGCMFGEIEVPA--EVLTDNVIRCQAPSHAAGRVPFYITGS 513 (713)
Q Consensus 438 lfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~--~~~~~~~cmFGd~eVpa--ei~q~GVLrC~~PPh~pG~V~l~Vt~~ 513 (713)
.+.|+.|+|..|+..|||.|+|.|.+|..... .......|.||+++... +.+.+..|+|.+||..+|.+++.|+-+
T Consensus 541 ~P~ItsI~P~~Gp~~GGT~vTI~G~nf~~~~~~~~~~~~~~V~igg~~C~~~~~~~s~t~I~C~tp~~~~~~~~v~V~v~ 620 (727)
T 2uzx_B 541 LPAIYKVFPNSAPLEGGTRLTICGWDFGFRRNNKFDLKKTRVLLGNESCTLTLSESTMNTLKCTVGPAMNKHFNMSIIIS 620 (727)
T ss_dssp CCEEEEEESSBCCSSCCCEEEEEEECCCEEETTEEESTTCEEEETTEECEECGGGCCSSEEEEECCC-----CCCEEEEE
T ss_pred CCEEeccCCCcccCCCCEEEEEEEecCCCCcccccCCcccEEEECCCccceeeeeccCCEEEEEeCCCCCCCccEEEEEe
Confidence 46899999999999999999999999964210 00235789999984433 245778999999996655444444433
Q ss_pred CccccccceeeeecCCCC
Q 005128 514 NRLACSEVREFEYREKPS 531 (713)
Q Consensus 514 n~~~cSev~eFEYr~~~~ 531 (713)
+....+....|+|.++..
T Consensus 621 ~~~~~~~~~~FtY~~P~I 638 (727)
T 2uzx_B 621 NGHGTTQYSTFSYVDPVI 638 (727)
T ss_dssp CSSCEEEEECCBCCCC--
T ss_pred CCcceeccccccccccee
Confidence 332223345799975433
No 123
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.52 E-value=0.00025 Score=77.86 Aligned_cols=86 Identities=20% Similarity=0.349 Sum_probs=68.9
Q ss_pred CceEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCCCCC-ceeEEEEEeCCc
Q 005128 437 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAA-GRVPFYITGSNR 515 (713)
Q Consensus 437 qlfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PPh~p-G~V~l~Vt~~n~ 515 (713)
|...|++|+|..|.. ||||+|.|.+|... .....|+||+.++...-+.+..|.|.+|+... |.|.+.|..++.
T Consensus 18 ~p~~i~~~~P~~g~~--~~~~~i~G~nfg~~----~~~~~v~~~~~~a~v~~~~~~~i~~~vp~~~~~g~~~v~v~~~~~ 91 (433)
T 4hw6_A 18 EEIVVEKFLPTEGRK--GTRVVVYGRNFGND----VSKVKVTIGGYPAKVINVKGESLLCICPSKAYEGDVKVSVVGDDE 91 (433)
T ss_dssp SCCEEEEEESSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEEEEEEECSSEEEEECCTTCTTCCEEEEEECTTS
T ss_pred CCCEEEEECCCCCCC--CCEEEEEeECCCCC----cceeEEEECCEEEEEEEeCCCEEEEEeCCCCCCCCEEEEEecCCc
Confidence 445899999999987 99999999999762 35899999998887777899999999999665 999999987765
Q ss_pred c----ccccceeeeecCC
Q 005128 516 L----ACSEVREFEYREK 529 (713)
Q Consensus 516 ~----~cSev~eFEYr~~ 529 (713)
. +.+ -..|+|...
T Consensus 92 ~~~~~~~~-~~~F~y~~~ 108 (433)
T 4hw6_A 92 AELKSGVC-EAKFDYQYN 108 (433)
T ss_dssp CEEEEEEC-SSCCEECCC
T ss_pred ceeeEEEe-eeEEEEEee
Confidence 2 222 245777654
No 124
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=97.28 E-value=3.9e-05 Score=90.13 Aligned_cols=75 Identities=12% Similarity=0.206 Sum_probs=1.0
Q ss_pred ceEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCCC-CCceeEEEEEeCCcc
Q 005128 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNRL 516 (713)
Q Consensus 438 lfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PPh-~pG~V~l~Vt~~n~~ 516 (713)
..+|+.|+|.+|+..|||.|+|+|.+|... ....|.||+.+.....+.+..|+|.+||+ .+|.|+|.|+-++..
T Consensus 635 ~P~I~sisP~~G~~sGGt~ITI~G~nf~~~-----~~~~V~ig~~~C~i~~~s~t~I~C~tP~~~~~g~~~V~V~idg~~ 709 (727)
T 2uzx_B 635 DPVITSISPKYGPMAGGTLLTLTGNYLNSG-----NSRHISIGGKTCTLKSVSNSILECYTPAQTISTEFAVKLKIDLAN 709 (727)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred cceeEEECCCccccCCCEEEEEEEECCCCC-----CceEEEECCEEeeEEeecCCEEEEEcCCCCCCceEEEEEEECCEE
Confidence 457999999999999999999999999652 35779999987766778999999999994 589999999987755
Q ss_pred c
Q 005128 517 A 517 (713)
Q Consensus 517 ~ 517 (713)
.
T Consensus 710 ~ 710 (727)
T 2uzx_B 710 R 710 (727)
T ss_dssp -
T ss_pred e
Confidence 3
No 125
>2yrp_A Nuclear factor of activated T-cells, cytoplasmic 4; beta-sandwich, immunoglobulin-like fold, TIG domain, IPT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.13 E-value=0.0023 Score=58.49 Aligned_cols=91 Identities=13% Similarity=0.211 Sum_probs=64.6
Q ss_pred cCCceEEEeecCCCccCCCCeEEEEEeccccCCCC---CC-----CCceEEEeCCeecceEeeecceeeeecCC-C----
Q 005128 435 QEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKL---SS-----DTKWGCMFGEIEVPAEVLTDNVIRCQAPS-H---- 501 (713)
Q Consensus 435 q~qlfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~---~~-----~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h---- 501 (713)
...+..|.+.|-.-+++.||-||+|+|..|...-. .+ ...| -++|++. .++.+...|+|.+|| |
T Consensus 5 a~~~P~I~k~s~~s~~v~GG~Ev~Ll~~k~~kd~kV~F~E~~~dG~~~W-E~~a~f~--~d~~~q~aivf~tPpY~~~~I 81 (114)
T 2yrp_A 5 SSGLPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQW-EEEATVN--RLQSNEVTLTLTVPEYSNKRV 81 (114)
T ss_dssp CCSCCEEEEEESSCEETTCCSEEEEEEESCCTTCEEEEECBCTTSCBCC-CCBCCBC--TTTCBTTEEEEECCCCSCCSC
T ss_pred CCCCCEEEEecCcccccCCCCEEEEEecccCCCCEEEEEEECCCCCcce-EEeeEEC--hHHcccccEEEecCCCCCCcc
Confidence 34477999999999999999999999998742000 00 0113 2333433 355777899999999 4
Q ss_pred -CCceeEEEEEeCCccccccceeeeecCC
Q 005128 502 -AAGRVPFYITGSNRLACSEVREFEYREK 529 (713)
Q Consensus 502 -~pG~V~l~Vt~~n~~~cSev~eFEYr~~ 529 (713)
.|=.|.||| +.+...+||...|+|...
T Consensus 82 ~~pV~V~~~l-~~~~rk~Se~~~FtY~P~ 109 (114)
T 2yrp_A 82 SRPVQVYFYV-SNGRRKRSPTQSFRFLPV 109 (114)
T ss_dssp SSCEEEEEEE-ECSSSCBCCCEEEEEECC
T ss_pred CCCeEEEEEE-CCCCCcccCCcCcEEech
Confidence 455777888 455456899999999874
No 126
>1ikn_C P50D, protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Mus musculus} SCOP: b.1.18.1
Probab=95.19 E-value=0.061 Score=49.52 Aligned_cols=89 Identities=16% Similarity=0.232 Sum_probs=60.5
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCC-------C-CCCCceEEEeCCeecceEeeecceeeeecCC-CC-----Cce
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKK-------L-SSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HA-----AGR 505 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~-------~-~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~-----pG~ 505 (713)
.|.+.|=.-|++.||.||.++|..+.-.. . ....-| -+||++. ++.+-....|+|.+|| |. |=.
T Consensus 5 ~I~r~s~~s~~v~GG~Ev~Llc~kv~K~dikV~F~e~~~~g~~W-E~~~~f~-~~dvh~Q~aIvf~tPpY~~~~I~~pV~ 82 (119)
T 1ikn_C 5 KIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVW-EGFGDFS-PTDVHRQFAIVFKTPKYKDVNITKPAS 82 (119)
T ss_dssp CEEEESCSEEETTCCCEEEEEESCCCTTSEEEEEEEECTTSCEE-EEECCCC-GGGEETTTEEEEECCCCSCTTCSSCEE
T ss_pred EEEEeeCCccccCCCCEEEEEeccccCCCCEEEEEEeCCCCCce-EEeEEeC-hhhccccceEEEECCCCCCCCcCCCEE
Confidence 69999999999999999999999774101 0 011124 2344431 3445566899999999 54 345
Q ss_pred eEEEEEeCCccccccceeeeecCCC
Q 005128 506 VPFYITGSNRLACSEVREFEYREKP 530 (713)
Q Consensus 506 V~l~Vt~~n~~~cSev~eFEYr~~~ 530 (713)
|.|+|.-.....+||...|+|....
T Consensus 83 V~i~L~r~sd~~~Sep~~FtY~P~~ 107 (119)
T 1ikn_C 83 VFVQLRRKSDLETSEPKPFLYYPEI 107 (119)
T ss_dssp EEEEEEETTTCCBCCCEEEEEECCS
T ss_pred EEEEEEcCCCCCccCCcccEeecCc
Confidence 5566655444568999999998753
No 127
>1my7_A NF-kappab P65 (RELA) subunit; immunoglobulin, IG, beta-sandwich, beta-sheet, homodimerdna- binding, transcription regulation, activator; 1.49A {Mus musculus} SCOP: b.1.18.1 PDB: 1my5_A 1bft_A
Probab=94.84 E-value=0.072 Score=48.65 Aligned_cols=87 Identities=16% Similarity=0.229 Sum_probs=61.6
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCC----CCCCceEEEeCCeecceEeeecceeeeecCC-CC-----CceeEEE
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKL----SSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HA-----AGRVPFY 509 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~----~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~-----pG~V~l~ 509 (713)
.|.+.|=.-|++.||.||.++|..+.-... .+ ..|. +||++. |+++-....|+|.+|| |. |=.|.++
T Consensus 5 ~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~VrF~e-~~WE-~~g~f~-~~Dvh~Q~aIvfktPpY~~~~I~~pV~V~i~ 81 (114)
T 1my7_A 5 KICRVNRRSGSCLGGDEIFLLCDKVQKEDIEVYFTG-PGWE-ARGSFS-QADVHRQVAIVFRTPPYADPSLQAPVRVSMQ 81 (114)
T ss_dssp CEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEE-TTEE-EECBCC-GGGBCTTSEEEEECCCCSCTTCCSCEEEEEE
T ss_pred EEEEecCCceecCCCcEEEEEecccccCCCEEEEEc-cCeE-EecccC-hhhcccceeEEEECCCCCCCccCCCEEEEEE
Confidence 699999999999999999999997742110 11 1463 444442 2567777899999999 43 3455566
Q ss_pred EEeCCccccccceeeeecCC
Q 005128 510 ITGSNRLACSEVREFEYREK 529 (713)
Q Consensus 510 Vt~~n~~~cSev~eFEYr~~ 529 (713)
+.-.....+||...|+|...
T Consensus 82 L~r~sd~~~Sep~~FtY~P~ 101 (114)
T 1my7_A 82 LRRPSDRELSEPMEFQYLPD 101 (114)
T ss_dssp EEETTTTEECCCEEEEEECC
T ss_pred EEeCCCCCcCCCcccEEecC
Confidence 65434446799999999874
No 128
>1u36_A DNA-binding, nuclear factor NF-kappa-B P105 subunit; transcription factor, NF-KB, dimerization domain, intertwined folding; 1.89A {Mus musculus} SCOP: b.1.18.1 PDB: 1u3z_A 1u3y_A 3jv4_B 1bfs_A 1u3j_A 1u42_A 1u41_A 1nfi_B
Probab=94.63 E-value=0.096 Score=47.28 Aligned_cols=87 Identities=16% Similarity=0.248 Sum_probs=57.3
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCC-------C-CCCCceEEEeCCeecceEeeecceeeeecCC-CC-----Cce
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKK-------L-SSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HA-----AGR 505 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~-------~-~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~-----pG~ 505 (713)
.|.+.|=.-|++.||.||.++|..+.-.. . ....-|. +||++. ++.+-....|+|.+|| |. |=.
T Consensus 5 ~I~r~s~~s~~v~GG~Ev~Llc~kv~K~dikV~F~E~~~~g~~WE-~~~~f~-~~dvh~Q~aIvf~tPpY~~~~I~~pV~ 82 (106)
T 1u36_A 5 KIVRMDRTAGCVTGGEEIWLLCDKVQKDDIQIRFYEEEENGGVWE-GFGDFS-PTDVHRQFAICFKTPKYKDVNITKPAS 82 (106)
T ss_dssp CEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEECC----CEE-EECBCC-GGGEETTTEEEEECCCCSCTTCSSCEE
T ss_pred EEEEeeCCccccCCCCEEEEEeccccCCCCEEEEEEeCCCCCceE-EeeecC-HHHcccceEEEEECCCCCCCccCCCEE
Confidence 69999999999999999999999774201 0 0011132 233321 2444456889999999 53 334
Q ss_pred eEEEEEeCCccccccceeeeecC
Q 005128 506 VPFYITGSNRLACSEVREFEYRE 528 (713)
Q Consensus 506 V~l~Vt~~n~~~cSev~eFEYr~ 528 (713)
|.|+|.-.....+||...|+|..
T Consensus 83 V~~~l~r~sd~~~Sep~~FtY~P 105 (106)
T 1u36_A 83 VFVQLRRKSDLETSEPKPFLYYP 105 (106)
T ss_dssp EEEEEECTTTCCBCCCEEEEEEC
T ss_pred EEEEEEcCCCCCccCCcCcEEcC
Confidence 55566554445689999999964
No 129
>1zk9_A Transcription factor RELB; NF-KB, transcription factors, intertwined dimer; 2.18A {Mus musculus} PDB: 1zka_A 3jv6_A 3jv4_A 3jss_A 3juz_A 3jv0_A
Probab=94.09 E-value=0.056 Score=49.06 Aligned_cols=87 Identities=15% Similarity=0.250 Sum_probs=60.7
Q ss_pred eEEEeecCCCccCCCCeEEEEEeccccCCCC----CCCCceEEEeCCeecceEeeecceeeeecCC-CCC---ceeE--E
Q 005128 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKL----SSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAA---GRVP--F 508 (713)
Q Consensus 439 fsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~----~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~p---G~V~--l 508 (713)
..|.+.|=.-|++.||.||.++|..+.-... .+ -.|.. ||++. ++++-....|+|.+|| |.+ -.|. +
T Consensus 13 L~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~V~F~e-~~WE~-~~~f~-~~Dvh~Q~aIvf~tPpY~~~~I~~pV~V~i 89 (110)
T 1zk9_A 13 LRICRINKESGPCTGGEELYLLCDKVQKEDISVVFST-ASWEG-RADFS-QADVHRQIAIVFKTPPYEDLEISEPVTVNV 89 (110)
T ss_dssp SCEEEESCSCCCTTCCCCCCEEESCCCTTSCCCEEEE-TTEEE-ECCCC-GGGCCCCCCCCCCCCCCSCTTCSSCEEEEE
T ss_pred CEEEEecCCccccCCCCEEEEEecccccCCcEEEEec-hheee-ccccC-cccccccceEEEECCCCCCcccCCCeEEEE
Confidence 3799999999999999999999997643110 11 15654 66542 3567777899999999 443 3344 4
Q ss_pred EEEeCCccccccceeeeecC
Q 005128 509 YITGSNRLACSEVREFEYRE 528 (713)
Q Consensus 509 ~Vt~~n~~~cSev~eFEYr~ 528 (713)
++.-.....+||...|+|..
T Consensus 90 ~L~r~sd~~~Sep~~FtY~P 109 (110)
T 1zk9_A 90 FLQRLTDGVCSEPLPFTYLP 109 (110)
T ss_dssp CCBCTTTCCBCCCEEEEECC
T ss_pred EEEeCCCCCccCCcCcEEcC
Confidence 44433445589999999964
No 130
>1oy3_C Transcription factor P65; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: b.1.18.1 PDB: 1k3z_A
Probab=93.10 E-value=0.26 Score=46.25 Aligned_cols=87 Identities=16% Similarity=0.243 Sum_probs=61.8
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCC----CCCCceEEEeCCeecceEeeecceeeeecCC-CC-----CceeEEE
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKL----SSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HA-----AGRVPFY 509 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~----~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~-----pG~V~l~ 509 (713)
.|.++|=.-|++.||.||.++|..+.-... .+ -.|.. ||++. |+++-....|+|.+|| |. |=.|.++
T Consensus 5 ~I~r~s~~sg~v~GG~Ev~LLceKv~K~Di~VrF~e-~~WE~-~g~f~-~~dVh~Q~AIvfkTPpY~~~~I~~pV~V~iq 81 (136)
T 1oy3_C 5 KICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTG-PGWEA-RGSFS-QADVHRQVAIVFRTPPYADPSLQAPVRVSMQ 81 (136)
T ss_dssp CEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEE-TTEEE-ECBCC-GGGBCTTSEEEEECCCCSCTTCCSCEEEEEE
T ss_pred EEEEecCCccccCCCcEEEEEccccccCCCEEEEEc-cCeEE-ecccC-hhheecceEEEEECCCCCCccCCCCeEEEEE
Confidence 699999999999999999999997632110 11 14543 34432 2566677789999999 54 4466667
Q ss_pred EEeCCccccccceeeeecCC
Q 005128 510 ITGSNRLACSEVREFEYREK 529 (713)
Q Consensus 510 Vt~~n~~~cSev~eFEYr~~ 529 (713)
|.-.....+||...|+|...
T Consensus 82 L~rpsd~~~Sep~~F~Y~P~ 101 (136)
T 1oy3_C 82 LRRPSDRELSEPMEFQYLPD 101 (136)
T ss_dssp EEETTTTEECCCEEEEEECC
T ss_pred EEeCCCCCccCCcceEEecC
Confidence 76544457899999999874
No 131
>3iag_C Recombining binding protein suppressor of hairless; protein-DNA complex, signaling, transcription, notch, activator, alternative splicing; HET: XYL; 2.00A {Mus musculus} PDB: 3brg_C* 3nbn_A 2f8x_C 3v79_C*
Probab=92.67 E-value=0.29 Score=53.25 Aligned_cols=68 Identities=16% Similarity=0.313 Sum_probs=57.8
Q ss_pred eEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCC-C----------CCceeEEEEEeCCcccccccee
Q 005128 455 TKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-H----------AAGRVPFYITGSNRLACSEVRE 523 (713)
Q Consensus 455 tKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h----------~pG~V~l~Vt~~n~~~cSev~e 523 (713)
.-|-|.|.+|.. ++.|.||++++.|.+-.+-.|.|..|+ . .|..||+.+.-.+++.-+--..
T Consensus 343 amlEl~G~nF~~-------~L~VWFG~v~aeT~yR~~e~l~c~vP~~~~~~~~w~~~~~~~~Vpi~LVR~DGviy~t~~t 415 (422)
T 3iag_C 343 AMLELTGQNFTP-------NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLT 415 (422)
T ss_dssp CEEEEEEESCCT-------TEEEEETTEECCEEEEETTEEEEECCCGGGTSTTCSSCCSCEEEEEEEEETTSEEEEEEEE
T ss_pred eEEEEEccCCCC-------CceEEECCCCceeEEeccceEEEeCCCHHHhccCccccCCceEEEEEEEecCCEEeeCCcc
Confidence 568899999954 899999999999999999999999998 2 3568999988888887777788
Q ss_pred eeecCC
Q 005128 524 FEYREK 529 (713)
Q Consensus 524 FEYr~~ 529 (713)
|+|...
T Consensus 416 fty~pe 421 (422)
T 3iag_C 416 FTYTPE 421 (422)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 888753
No 132
>1a3q_A Protein (nuclear factor kappa-B P52); transcription factor, immune response, DNA-protein complex, transcription/DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 3do7_B 3jv6_B 3jv5_A
Probab=90.55 E-value=0.62 Score=48.76 Aligned_cols=86 Identities=16% Similarity=0.294 Sum_probs=59.5
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCC------CCCCCceEEEeCCeecceEeeecceeeeecCC-CC-----CceeE
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKK------LSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HA-----AGRVP 507 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~------~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~-----pG~V~ 507 (713)
.|.++|=.-|++.||.||.++|..+.-.. +....+|. +||++. ++.+-....|+|.+|| +. |=.|.
T Consensus 187 ~I~r~s~~sg~v~GG~Ev~Llc~kv~K~Di~V~F~E~~~~gWE-~~~~f~-~~dvh~Q~aIvf~tPpY~~~~I~~pV~V~ 264 (285)
T 1a3q_A 187 KISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQ-AFGDFS-PTDVHKQYAIVFRTPPYHKMKIERPVTVF 264 (285)
T ss_dssp CEEEESCSEEETTCCCEEEEEESSCCTTTEEEEEEECSSSCEE-EECBCC-GGGEETTTEEEEECCCCSCTTCSSCEEEE
T ss_pred eEEEecCCccccCCCCEEEEEeccccCCCCEEEEEecCCCCCE-EeeEeC-HHHccceeeEEEECCCCCCCCCCCCeEEE
Confidence 69999999999999999999999764211 01112353 344432 2344446779999999 43 44566
Q ss_pred EEEEeCCccccccceeeeec
Q 005128 508 FYITGSNRLACSEVREFEYR 527 (713)
Q Consensus 508 l~Vt~~n~~~cSev~eFEYr 527 (713)
|++.-.....+||...|+|.
T Consensus 265 iqL~r~sd~~~Sep~~FtY~ 284 (285)
T 1a3q_A 265 LQLKRKRGGDVSDSKQFTYY 284 (285)
T ss_dssp EEEEETTTCCBCCCEEEEEE
T ss_pred EEEEeCCCCCccCCCCceeC
Confidence 66665455568999999995
No 133
>2v2t_A RELB, transcription factor RELB; 4-diphosphocytidyl-2C-methyl-D-erythritol, aquifex aeolicus, nucleotide-binding, isoprene biosynthesis; 3.05A {Mus musculus} PDB: 3do7_A
Probab=90.47 E-value=0.48 Score=49.71 Aligned_cols=84 Identities=15% Similarity=0.197 Sum_probs=60.4
Q ss_pred eEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCe--ec-----ceEeeecceeeeecCC-CC-----Cce
Q 005128 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI--EV-----PAEVLTDNVIRCQAPS-HA-----AGR 505 (713)
Q Consensus 439 fsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~--eV-----paei~q~GVLrC~~PP-h~-----pG~ 505 (713)
..|.++|=.-|++.||.||.++|..+.- ..-.|.|=+. |. ++.+-....|+|.+|| +. |=.
T Consensus 191 L~I~r~s~~sgsv~GG~Ev~LLc~kv~K------~dikV~F~e~~WE~~~~f~~~Dvh~Q~aIvf~tPpY~~~~I~~pV~ 264 (288)
T 2v2t_A 191 LRICRINKESGPCTGGEELYLLCDKVQK------EDISVVFSTASWEGRADFSQADVHRQIAIVFKTPPYEDLEISEPVT 264 (288)
T ss_dssp CCBCCCSCSCCCSSCCCEEEEEBSSCCT------TSEEEEEECSSCEEECCCCGGGEETTTEEEEECCCCTTCCCSSCCB
T ss_pred CeEEEeeCCccccCCCCEEEEEeccccc------CCCEEEEEecceEEeeEeChhhccceeEEEEECCCCCCCCcCCCeE
Confidence 4799999999999999999999997631 1334444332 22 3444556689999999 44 456
Q ss_pred eEEEEEeCCccccccceeeeecC
Q 005128 506 VPFYITGSNRLACSEVREFEYRE 528 (713)
Q Consensus 506 V~l~Vt~~n~~~cSev~eFEYr~ 528 (713)
|.|++.-.....|||...|+|..
T Consensus 265 V~iqL~r~sd~~~Sep~~FtY~P 287 (288)
T 2v2t_A 265 VNVFLQRLTDGVCSEPLPFTYLP 287 (288)
T ss_dssp CCEEEEETTTCCBCCCBCCBCCC
T ss_pred EEEEEEeCCCCCcCCCcCcEEcC
Confidence 66777664445789999999964
No 134
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=90.14 E-value=0.66 Score=50.85 Aligned_cols=78 Identities=19% Similarity=0.164 Sum_probs=56.3
Q ss_pred ceEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCC-eecc-eEee--ecceeeeecCC-CC--CceeEEEE
Q 005128 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE-IEVP-AEVL--TDNVIRCQAPS-HA--AGRVPFYI 510 (713)
Q Consensus 438 lfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd-~eVp-aei~--q~GVLrC~~PP-h~--pG~V~l~V 510 (713)
..+|+.++|+.+ ..|..|+|.|.+|.. .-.|.||. +++. ...+ .+..|+-.+|. .. +|.|.+
T Consensus 113 aPtITSISpe~~--~aGd~VTItGsNF~~-------iskV~FgG~veaT~~~svs~S~T~ItVtVPaGA~~~sG~ItV-- 181 (439)
T 3orj_A 113 APSITKISNCMP--NVGEPIIVYGSGLTE-------IAKVVFPGNVVVTEGIISDLDGEYFMVDMPAGVSEEGGSIFV-- 181 (439)
T ss_dssp CCEEEEESCSSC--CTTCEEEEEEECCTT-------CCEEEETTTEEECSSCEECTTSSEEEEECCTTCCTTCBCCEE--
T ss_pred CCEEEEeCCCCC--CCCCEEEEEccCCCc-------eeEEEECCCeeEEEEEEecCCCCEEEEEecCCCcCCCceEEE--
Confidence 458999999876 578999999999965 36799985 5665 2334 67899999999 55 687764
Q ss_pred EeCCccccccceeeeecCC
Q 005128 511 TGSNRLACSEVREFEYREK 529 (713)
Q Consensus 511 t~~n~~~cSev~eFEYr~~ 529 (713)
...++.+.| .|-|+++
T Consensus 182 vT~~GtA~S---~~~f~dk 197 (439)
T 3orj_A 182 EGSNGGAYS---PAYFNYK 197 (439)
T ss_dssp EETTEEEEC---CSCBTCG
T ss_pred EeCCCcEee---eEEEccC
Confidence 455555433 3555554
No 135
>1ikn_A P65, protein (NF-kappa-B P65 subunit); transcription factor, IKB/NFKB complex; 2.30A {Mus musculus} SCOP: b.1.18.1 b.2.5.3 PDB: 1nfi_A 2ram_A* 1ram_A* 2i9t_A 1lei_A* 1le9_A 1le5_A* 1vkx_A* 3gut_A
Probab=89.34 E-value=0.71 Score=48.35 Aligned_cols=88 Identities=16% Similarity=0.243 Sum_probs=59.3
Q ss_pred eEEEeecCCCccCCCCeEEEEEeccccCCCC----CCCCceEEEeCCeecceEeeecceeeeecCC-CC-----CceeEE
Q 005128 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKL----SSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HA-----AGRVPF 508 (713)
Q Consensus 439 fsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~----~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~-----pG~V~l 508 (713)
..|.++|-.-|++.||.||.++|..+.-... .+ -.|. +||++. ++.+-....|+|.+|| |. |=.|.|
T Consensus 176 L~I~r~s~~sg~v~GG~Ev~Llc~kv~K~di~V~F~e-~~WE-~~~~f~-~~dvh~Q~aIvf~tPpY~~~~I~~pV~V~i 252 (286)
T 1ikn_A 176 LKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTG-PGWE-ARGSFS-QADVHRQVAIVFRTPPYADPSLQAPVRVSM 252 (286)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEE-TTEE-EECBCC-GGGBCTTSEEEEECCCCSCTTCSSCEEEEE
T ss_pred CeEEEecCCccccCCCCEEEEEecccccCCCEEEEec-cceE-EeeecC-HHHhccceeEEEECCCCCCCCcCCCEEEEE
Confidence 3799999999999999999999997731110 00 1342 333321 2334445779999999 43 345556
Q ss_pred EEEeCCccccccceeeeecCC
Q 005128 509 YITGSNRLACSEVREFEYREK 529 (713)
Q Consensus 509 ~Vt~~n~~~cSev~eFEYr~~ 529 (713)
++.-.....+||...|+|...
T Consensus 253 ~L~r~sd~~~Sep~~FtY~P~ 273 (286)
T 1ikn_A 253 QLRRPSDRELSEPMEFQYLPD 273 (286)
T ss_dssp EEECTTTCCBCCCEEEEEECC
T ss_pred EEEeCCCCCcCCCcCcEEecC
Confidence 665544456899999999874
No 136
>1nfk_A Protein (nuclear factor kappa-B (NF-KB)); NF-KB P50, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA; 2.30A {Mus musculus} SCOP: b.1.18.1 b.2.5.3 PDB: 2v2t_B 1ooa_A 1lei_B* 1le9_B 1le5_B* 2i9t_B 1vkx_B* 3gut_B 2o61_B
Probab=89.31 E-value=0.93 Score=48.25 Aligned_cols=89 Identities=16% Similarity=0.271 Sum_probs=60.5
Q ss_pred eEEEeecCCCccCCCCeEEEEEeccccCCC------CCCCC--ceEEEeCCeecceEeeecceeeeecCC-CC-----Cc
Q 005128 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKK------LSSDT--KWGCMFGEIEVPAEVLTDNVIRCQAPS-HA-----AG 504 (713)
Q Consensus 439 fsI~d~SP~wgy~~ggtKVlI~G~f~~~~~------~~~~~--~~~cmFGd~eVpaei~q~GVLrC~~PP-h~-----pG 504 (713)
..|.+++-.-|++.||.||.++|..+.-.. +.... -|. .||++. ++.+-....|+|.+|| +. |=
T Consensus 210 L~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~VrF~E~~~~g~~WE-~~g~f~-~~Dvh~Q~AIvfkTPpY~~~~I~~pV 287 (325)
T 1nfk_A 210 LKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWE-GFGDFS-PTDVHRQFAIVFKTPKYKDVNITKPA 287 (325)
T ss_dssp CCEEEESCSCEESSCCCEEEEEESCCCTTTEEEEEEECCCSSCCEE-EECBCC-GGGBCTTSEEEEECCCTTSSCCCSSE
T ss_pred CeEEEecCCccccCCCCEEEEEecccccCCCEEEEEEeCCCCCeeE-EeeeeC-HHHccceeEEEEECCCCCCCCcCCCe
Confidence 379999999999999999999999764101 00111 242 334331 3444456789999999 43 44
Q ss_pred eeEEEEEeCCccccccceeeeecCC
Q 005128 505 RVPFYITGSNRLACSEVREFEYREK 529 (713)
Q Consensus 505 ~V~l~Vt~~n~~~cSev~eFEYr~~ 529 (713)
.|.|+|.-.....|||...|+|...
T Consensus 288 ~V~iqL~r~sd~~~Sep~~FtY~P~ 312 (325)
T 1nfk_A 288 SVFVQLRRKSDLETSEPKPFLYYPE 312 (325)
T ss_dssp EEEEEEEETTTCCBCCCEEEEEECC
T ss_pred EEEEEEEcCCCCCccCCccceeecC
Confidence 5666666544457899999999874
No 137
>1p7h_L Nuclear factor of activated T-cells, cytoplasmic 2; DNA binding protein, transcription regulation, activator, transcription/DNA complex; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 2o93_L 1a02_N* 1pzu_B 1owr_M 2as5_N 1s9k_C 3qrf_N 1nfa_A 1a66_A*
Probab=88.84 E-value=0.84 Score=47.83 Aligned_cols=86 Identities=15% Similarity=0.296 Sum_probs=62.4
Q ss_pred ceEEEeecCCCccCCCCeEEEEEeccccCCCC-------C--CCCceEEEeCCeecceEeeecceeeeecCC-CC-----
Q 005128 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKL-------S--SDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HA----- 502 (713)
Q Consensus 438 lfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~-------~--~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~----- 502 (713)
+..|.+.+-.-|++.||.||.++|..+.. .. . ....| -+||++. .++.+..-|+|.+|| +.
T Consensus 185 ~l~I~r~s~~sg~v~GG~Ei~Llc~kv~K-DikVrF~E~~~dg~~~W-e~~g~f~--~dvh~Q~AIvfkTPpY~~~~I~~ 260 (286)
T 1p7h_L 185 LPMVERQDTDSCLVYGGQQMILTGQNFTS-ESKVVFTEKTTDGQQIW-EMEATVD--KDKSQPNMLFVEIPEYRNKHIRT 260 (286)
T ss_dssp CCEEEEESCSEEETTCCCEEEEEEESCCS-SCEEEEEEECSSSCEEE-EEEECBC--TTTCBTTEEEEECCCCSCTTCSS
T ss_pred CCeEEEeccccccccCCcEEEEEecccCC-CcEEEEEEECCCCCcce-EEeEEeC--ccccccceEEEECCCCccCccCC
Confidence 45899999999999999999999997732 10 0 01235 3455553 356677889999999 44
Q ss_pred CceeEEEEEeCCccccccceeeeecC
Q 005128 503 AGRVPFYITGSNRLACSEVREFEYRE 528 (713)
Q Consensus 503 pG~V~l~Vt~~n~~~cSev~eFEYr~ 528 (713)
|=.|.|++.-. ...+||...|+|..
T Consensus 261 pV~V~~~l~r~-d~~~Sep~~FtY~P 285 (286)
T 1p7h_L 261 PVKVNFYVING-KRKRSQPQHFTYHP 285 (286)
T ss_dssp CEEEEEEEEET-TTEECCCEEEEEEC
T ss_pred CeEEEEEEeCC-CCCcCCCcCceEec
Confidence 55666777655 44689999999964
No 138
>1svc_P Protein (nuclear factor kappa-B (NF-KB)); DNA-binding, transcription regulation, activator, nuclear protein, phosphorylation, repeat, DNA; HET: DNA; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3
Probab=88.50 E-value=0.87 Score=49.14 Aligned_cols=89 Identities=16% Similarity=0.258 Sum_probs=59.8
Q ss_pred eEEEeecCCCccCCCCeEEEEEeccccCCC-------C-CCCCceEEEeCCeecceEeeecceeeeecCC-CC-----Cc
Q 005128 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKK-------L-SSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HA-----AG 504 (713)
Q Consensus 439 fsI~d~SP~wgy~~ggtKVlI~G~f~~~~~-------~-~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~-----pG 504 (713)
..|.+++-.-|++.||.||.++|..+.-.. . ....-|. .||++. ++.+-....|+|.+|| +. |=
T Consensus 250 L~I~R~s~~sgsv~GG~Ev~LLc~Kv~K~DikVrF~E~~~~g~~WE-~~g~f~-~~DVH~Q~AIvfkTPpY~~~~I~~pV 327 (365)
T 1svc_P 250 LKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWE-GFGDFS-PTDVHRQFAIVFKTPKYKDINITKPA 327 (365)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESSCCGGGCEEEEEEEETTTEEEE-EECBCC-GGGEETTTEEEEECCCCSCSCCSSCE
T ss_pred CeEEEecCCccccCCCCEEEEEecccccCCCEEEEEEeCCCCCeeE-EeeeeC-hHHhcceeeEEEECCCCCCCCcCCCe
Confidence 379999999999999999999999763100 0 0001132 333321 3455556789999999 43 44
Q ss_pred eeEEEEEeCCccccccceeeeecCC
Q 005128 505 RVPFYITGSNRLACSEVREFEYREK 529 (713)
Q Consensus 505 ~V~l~Vt~~n~~~cSev~eFEYr~~ 529 (713)
.|.|+|.-.....|||...|+|...
T Consensus 328 ~V~iqL~R~sd~~~Sep~~FtY~P~ 352 (365)
T 1svc_P 328 SVFVQLRRKSDLETSEPKPFLYYPE 352 (365)
T ss_dssp EEEEEEECTTTCCBCCCEEEEEECC
T ss_pred EEEEEEEcCCCCCccCCccceeecC
Confidence 5666665444447899999999874
No 139
>2o61_A Transcription factor P65/interferon regulatory FA 7/interferon regulatory factor...; protein-DNA complex, transcription-DNA complex; 2.80A {Homo sapiens}
Probab=87.08 E-value=0.92 Score=51.34 Aligned_cols=88 Identities=16% Similarity=0.229 Sum_probs=59.4
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCC----CCCCceEEEeCCeecceEeeecceeeeecCC-CC-----CceeEEE
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKL----SSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HA-----AGRVPFY 509 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~----~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~-----pG~V~l~ 509 (713)
.|.++|-.-|++.||.||.|+|..+.-... .+ -.|. +||++. ++++-....|+|.+|| +. |=.|.|+
T Consensus 178 ~I~r~s~~sgsv~GG~Ev~LLc~kv~K~DikVrF~e-~~WE-~~a~f~-~~Dvh~Q~AIvfkTPpY~~~~I~~pV~V~iq 254 (540)
T 2o61_A 178 KICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTG-PGWE-ARGSFS-QADVHRQVAIVFRTPPYADPSLQAPVRVSMQ 254 (540)
T ss_dssp CEEEESCSEEETTCCCEEEEEESSCBTTBCEEEEEE-TTEE-EECBCC-GGGEETTTEEEEECCCCSSSCCSSCEEEEEE
T ss_pred eEEEecCCccccCCCCeEEEEecccccCCcEEEEec-ccce-eccccC-hhhhcceeeEEEeCCCCCCCCCCCCeEEEEE
Confidence 699999999999999999999997742110 00 1242 233221 3456667889999999 43 3455566
Q ss_pred EEeCCccccccceeeeecCCC
Q 005128 510 ITGSNRLACSEVREFEYREKP 530 (713)
Q Consensus 510 Vt~~n~~~cSev~eFEYr~~~ 530 (713)
|.-.....+||...|+|....
T Consensus 255 L~r~sd~~~Sep~~FtY~P~~ 275 (540)
T 2o61_A 255 LRRPSDRELSEPMEFQYLPDG 275 (540)
T ss_dssp EECGGGCCBCCCEEEEEECC-
T ss_pred EEeCCCCCcCCCcCcEEecCC
Confidence 654344568999999998743
No 140
>1gji_A C-REL protein, C-REL proto-oncogene protein; NF-KB/DNA complex, transcription factor, C-REL homodimer, transcription/DNA complex; 2.85A {Gallus gallus} SCOP: b.1.18.1 b.2.5.3
Probab=85.96 E-value=1.1 Score=46.61 Aligned_cols=87 Identities=16% Similarity=0.238 Sum_probs=58.7
Q ss_pred eEEEeecCCCccCCCCeEEEEEeccccCCCC----CCCCceEEEeCCeecceEeeecceeeeecCC-C----CCceeEEE
Q 005128 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKL----SSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-H----AAGRVPFY 509 (713)
Q Consensus 439 fsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~----~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h----~pG~V~l~ 509 (713)
..|.+.|=.-|++.||.||.++|..+.-... .+. .|. +||++. ++.+-....|+|.+|| + .|=.|.++
T Consensus 179 L~I~r~s~~sg~v~GG~Ev~LLc~kv~K~di~VrF~e~-~We-~~~~f~-~~Dvh~Q~AIvf~TPpY~~~I~~pV~V~iq 255 (275)
T 1gji_A 179 LRICRVNKNCGSVKGGDEIFILCDKVQKDDIEVRFVLD-NWE-AKGSFS-QADVHRQVAIVFRTPPFLRDITEPITVKMQ 255 (275)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCGGGCEEEEEET-TEE-EECBCC-GGGEETTTEEEEECCCCSSCCSSCEEEEEE
T ss_pred CEEEEeeCCccccCCCCEEEEEecccccCCCEEEEEcc-cee-eccccC-hhhhcceeeEEEeCCCCCcCCCCCEEEEEE
Confidence 3699999999999999999999997642110 000 243 333321 3455666789999999 4 33345566
Q ss_pred EEeCCccccccceeeeecC
Q 005128 510 ITGSNRLACSEVREFEYRE 528 (713)
Q Consensus 510 Vt~~n~~~cSev~eFEYr~ 528 (713)
+.-.....|||...|+|..
T Consensus 256 L~r~sd~~~Sep~~FtY~P 274 (275)
T 1gji_A 256 LRRPSDQEVSEPMDFRYLP 274 (275)
T ss_dssp EEEGGGTEECCCEEEEEEC
T ss_pred EEcCCCCCccCCcCcEEcC
Confidence 6543344589999999964
No 141
>1imh_C NF-AT5, tonebp, nuclear factor of activated T cells 5; beta barrel, protein-DNA complex, double helix, DNA encirclement, transcription/DNA complex; 2.86A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3
Probab=85.85 E-value=2 Score=44.82 Aligned_cols=87 Identities=22% Similarity=0.301 Sum_probs=61.2
Q ss_pred ceEEEeecCCCccCCCCeEEEEEeccccCCC-------CCCCCceEEEeCCeecceEeeecceeeeecCC-CC-----Cc
Q 005128 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKK-------LSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HA-----AG 504 (713)
Q Consensus 438 lfsI~d~SP~wgy~~ggtKVlI~G~f~~~~~-------~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP-h~-----pG 504 (713)
...|.++|-.-|++.||.||.++|..+...- ......|.. ||++. ++. +....|+|.+|| +. |=
T Consensus 181 ~l~I~r~s~~sg~v~GG~Ev~Llc~kv~KdikVrF~E~~~d~~~WE~-~~~f~-~~d-vhQ~aIvf~tPpY~~~~I~~pV 257 (281)
T 1imh_C 181 VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKS-EAEID-MEL-FHQNHLIVKVPPYHDQHITLPV 257 (281)
T ss_dssp CCEEEEESCCEEETTCCCEEEEEEECCCTTCEEEEESSSCTTCSCEE-EECBC-GGG-CCSSEEEEECCCCSCTTCSSCE
T ss_pred CCeEEEEecCccccCCCcEEEEEeeccCCCcEEEEEEeCCCCCceEE-eEEeC-hhh-cccceEEEECCCCccCccCCCe
Confidence 4589999999999999999999998664200 011235654 66664 222 346799999999 43 45
Q ss_pred eeEEEEEeCCccccccceeeeecC
Q 005128 505 RVPFYITGSNRLACSEVREFEYRE 528 (713)
Q Consensus 505 ~V~l~Vt~~n~~~cSev~eFEYr~ 528 (713)
.|.|+|.- +...+|+...|+|..
T Consensus 258 ~V~iqL~r-sd~~~S~p~~FtY~P 280 (281)
T 1imh_C 258 SVGIYVVT-NAGRSHDVQPFTYTP 280 (281)
T ss_dssp EEEEEEEE-TTEECCSCEEEEEEC
T ss_pred EEEEEEEe-CCCCccCCcCceecC
Confidence 66677765 445679999999964
No 142
>3brd_A LIN-12 and GLP-1 phenotype protein 1, isoform A; protein-DNA complex, signaling, transcription, notch; HET: DNA; 2.21A {Caenorhabditis elegans} SCOP: b.1.18.1 b.2.5.8 b.42.7.1 PDB: 2fo1_A 1ttu_A* 3brf_A*
Probab=77.61 E-value=5.7 Score=44.03 Aligned_cols=81 Identities=16% Similarity=0.268 Sum_probs=59.9
Q ss_pred EEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCC----CC-------------
Q 005128 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS----HA------------- 502 (713)
Q Consensus 440 sI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PP----h~------------- 502 (713)
-|.+..|.-|- ++-.-+-|.|.+|.. ++.|.||++++-+.+-.+-.|.|..|+ +.
T Consensus 377 P~V~~~~~~g~-g~~~mlel~G~nF~~-------~l~VWfG~~~aeT~~r~~e~l~c~vP~~s~~~~~~~~w~~~~~~~~ 448 (477)
T 3brd_A 377 PVVGSLEVDGH-GEASRVELHGRDFKP-------NLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTTG 448 (477)
T ss_dssp CEEEEEEEECS-GGGCEEEEEEECCCT-------TEEEEETTEEECEEEEETTEEEEECCCHHHHSCTTTHHHHBCTTTC
T ss_pred CeeeEEeecCC-CceeEEEEEcccCCC-------CCeEEECCccceeeEEccceeeccCCCHHHhCccccccccccccCC
Confidence 35555554321 113567788999854 899999999988888888889999998 44
Q ss_pred CceeEEEEEeCCccccccceeeeecC
Q 005128 503 AGRVPFYITGSNRLACSEVREFEYRE 528 (713)
Q Consensus 503 pG~V~l~Vt~~n~~~cSev~eFEYr~ 528 (713)
|-.||+-+.-.++..-.--..|+|..
T Consensus 449 ~~~vPl~LVr~dGviy~t~~tf~y~p 474 (477)
T 3brd_A 449 DVEVPISLVRDDGVVYSSGLTFSYKS 474 (477)
T ss_dssp CBEEEEEEEETTSEEEEEEEEEETTC
T ss_pred ceEeeEEEEecCCEEEecCceEEecc
Confidence 44499988888888766667788864
No 143
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.20 E-value=5.4 Score=37.04 Aligned_cols=29 Identities=28% Similarity=0.685 Sum_probs=21.2
Q ss_pred EEeeccccCccccceeeeeccCCCceEEEEe
Q 005128 101 CYYAHGEDNENFQRRSYWMLDGQLEHIVLVH 131 (713)
Q Consensus 101 ~~y~h~~~~~~f~rr~y~~l~~~~~~ivlvh 131 (713)
.|-+|--..-+-.||-||.||.. -|.|.+
T Consensus 12 GWmVH~t~~d~~rKRHYWrLD~K--~Itlf~ 40 (129)
T 2d9z_A 12 GWMVHYTSRDNLRKRHYWRLDSK--CLTLFQ 40 (129)
T ss_dssp EEEEEEESSCCCCEEEEEEEESS--CEEEES
T ss_pred ceEEEEccCCccccceeeEecCC--eEEEEe
Confidence 56677555555699999999964 587765
No 144
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=57.34 E-value=31 Score=40.14 Aligned_cols=86 Identities=16% Similarity=0.265 Sum_probs=54.4
Q ss_pred CCceEEEeecCCCccCC-CCeEEEEEeccccCCCCCCCCceEEEeCCe-ecceEeeecceeeeecCC------CCCc---
Q 005128 436 EQLFSIRDFSPDWAYSG-AETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNVIRCQAPS------HAAG--- 504 (713)
Q Consensus 436 ~qlfsI~d~SP~wgy~~-ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpaei~q~GVLrC~~PP------h~pG--- 504 (713)
.|=..|+ +.|.--..+ ..+.|++...++.. +. .+|.|.||+. +.+|.+ ..+.+.|..|+ -.+|
T Consensus 526 ~qC~~i~-~~P~~~s~~~~~~~v~l~v~~lP~---l~-~~~~C~fg~~~~~~a~~-~~~~v~C~sP~~~~~p~~p~g~d~ 599 (681)
T 3oky_A 526 SQCMSLE-VHPNSISVSDHSRLLSLVVNDAPN---LS-EGIACAFGNLTEVEGQV-SGSQVICISPGPKDVPVIPLDQDW 599 (681)
T ss_dssp GGCCEEE-EESSEEETTSCSCEEEEEEETCCC---CT-TCEEEEETTTEEEECEE-ETTEEEEECCCTTTSCCCC--CCE
T ss_pred Cccceee-ecCccccccccccEEEEeccCCCC---CC-CCCEEEcCCccccccee-cCCeeEeCCCCHHhCCCCCCCceE
Confidence 3555775 888866664 47788888887733 22 3599999996 777754 77788998776 2345
Q ss_pred -eeEEEEEeCC-ccccccceeeeecC
Q 005128 505 -RVPFYITGSN-RLACSEVREFEYRE 528 (713)
Q Consensus 505 -~V~l~Vt~~n-~~~cSev~eFEYr~ 528 (713)
.|+|++.... +.. --...|.|-+
T Consensus 600 ~~v~l~l~~~~~~~~-~~s~~f~FYd 624 (681)
T 3oky_A 600 FGLELQLRSKETGKI-FVSTEFKFYN 624 (681)
T ss_dssp EEEEEEEEETTTCCE-EEEEEEEEEC
T ss_pred EEEEEEEEeccCCCc-eeEEeeEEEc
Confidence 3677877642 222 1234566654
No 145
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=43.89 E-value=24 Score=38.72 Aligned_cols=69 Identities=10% Similarity=0.072 Sum_probs=50.5
Q ss_pred cCCCCeEEEEEeccccCCCCCCCCceEEEeCCeec--ceEeeecceeeeecCC-CCCc------eeEEEEEeCCcccccc
Q 005128 450 YSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEV--PAEVLTDNVIRCQAPS-HAAG------RVPFYITGSNRLACSE 520 (713)
Q Consensus 450 y~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eV--paei~q~GVLrC~~PP-h~pG------~V~l~Vt~~n~~~cSe 520 (713)
...-|..|+|.|.+|.+ .-.+.||+++| ...++.+..|+-.+|. -.+| ...++|.-+++..
T Consensus 34 ~a~pGd~ItItGsNL~~-------vtkV~FNdvea~fnstyiTdtsI~VtIPs~aP~G~vd~~VtnkI~VvTdgGt~--- 103 (439)
T 3orj_A 34 FARLGQLIRIEGEGFNG-------LKKVYINGYNCYFNPVFVSNKSFLVSVNSKVPTTEADENVRNTIRLVKDGGEY--- 103 (439)
T ss_dssp EEETTCEEEEEEECCTT-------CCEEEETTEECCBCGGGCCSSEEEEECCTTCCSTTSCTTTTTEEEEEETTEEE---
T ss_pred cccCCCEEEEEeeCCCC-------eeEEEECCEEeeeccccccCCEEEEEcCCCCCCccccccccceEEEEECCCEE---
Confidence 34568999999999965 45899999988 4567899999999998 4445 4466776655532
Q ss_pred ceeeeecC
Q 005128 521 VREFEYRE 528 (713)
Q Consensus 521 v~eFEYr~ 528 (713)
...|.+..
T Consensus 104 ty~FtVla 111 (439)
T 3orj_A 104 VYDFQIRA 111 (439)
T ss_dssp EEECEEEC
T ss_pred eeeeEEec
Confidence 23566554
No 146
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}
Probab=33.98 E-value=12 Score=31.76 Aligned_cols=8 Identities=75% Similarity=1.527 Sum_probs=7.3
Q ss_pred ccccceee
Q 005128 70 KDGHRWRK 77 (713)
Q Consensus 70 ~dg~~w~k 77 (713)
.|||+|||
T Consensus 15 ~DGy~WRK 22 (76)
T 2ayd_A 15 NDGYRWRK 22 (76)
T ss_dssp CCSSCEEE
T ss_pred CCCchhhh
Confidence 59999998
No 147
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*
Probab=32.18 E-value=11 Score=32.00 Aligned_cols=9 Identities=67% Similarity=1.269 Sum_probs=7.7
Q ss_pred ccccceeec
Q 005128 70 KDGHRWRKK 78 (713)
Q Consensus 70 ~dg~~w~kk 78 (713)
.|||+|||=
T Consensus 18 dDGy~WRKY 26 (78)
T 1wj2_A 18 DDGYRWRKY 26 (78)
T ss_dssp CSSSCBCCC
T ss_pred CCCchhhhC
Confidence 699999973
No 148
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=24.12 E-value=2.4e+02 Score=32.35 Aligned_cols=65 Identities=26% Similarity=0.289 Sum_probs=49.8
Q ss_pred eEEEeecCCCccCCCCeEEEEEeccccCCCCCCCCceEEEeCCeecceEeeecceeeeecCCCCCceeEEEEE
Q 005128 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYIT 511 (713)
Q Consensus 439 fsI~d~SP~wgy~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PPh~pG~V~l~Vt 511 (713)
..|..+-|.=| ..|..|+|.|..+... .-.+.||..+....-|.+|.+.-.+|...+|.+.+.|+
T Consensus 499 p~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~v~ 563 (686)
T 1qho_A 499 PQIGSVAPNMG--IPGNVVTIDGKGFGTT------QGTVTFGGVTATVKSWTSNRIEVYVPNMAAGLTDVKVT 563 (686)
T ss_dssp CEEEEEESSEE--CTTCEEEEEEECCCSS------CCEEEETTEECCEEEECSSEEEEECCSCCCEEEEEEEE
T ss_pred Ccccccccccc--CCCCEEEEEeecCCCc------ceEEEEecceeeEEEcCCCcEEEecCCCCCCceEEEEe
Confidence 45666666332 2356689999887542 12499999988888899999999999889999999998
No 149
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=20.02 E-value=89 Score=28.77 Aligned_cols=30 Identities=27% Similarity=0.635 Sum_probs=22.8
Q ss_pred EEEeeccccCccccceeeeeccCCCceEEEEe
Q 005128 100 HCYYAHGEDNENFQRRSYWMLDGQLEHIVLVH 131 (713)
Q Consensus 100 ~~~y~h~~~~~~f~rr~y~~l~~~~~~ivlvh 131 (713)
-.|-+|--..-.-.||-||.||.. -|.|-+
T Consensus 11 eGW~VH~t~~d~~rKRHYWrLD~K--~Itlf~ 40 (125)
T 2coa_A 11 EGWVVHYSNKDTLRKRHYWRLDCK--CITLFQ 40 (125)
T ss_dssp EEEEEECCSSSCCCEEEEEEECSS--EEEEES
T ss_pred cceEEEEccCCccccceeeEecCC--eEEEEe
Confidence 467788766666789999999963 577754
Done!