Query 005131
Match_columns 713
No_of_seqs 350 out of 3043
Neff 8.3
Searched_HMMs 46136
Date Thu Mar 28 18:33:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005131.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005131hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02418 delta-1-pyrroline-5-c 100.0 8E-122 2E-126 1061.0 77.1 712 1-713 5-718 (718)
2 TIGR01092 P5CS delta l-pyrroli 100.0 3E-121 7E-126 1058.8 75.6 707 6-712 2-711 (715)
3 KOG2450 Aldehyde dehydrogenase 100.0 1.1E-85 2.4E-90 693.6 30.8 400 266-694 42-498 (501)
4 KOG2451 Aldehyde dehydrogenase 100.0 3E-83 6.5E-88 643.6 31.9 395 265-692 44-499 (503)
5 COG1012 PutA NAD-dependent ald 100.0 6.2E-81 1.3E-85 690.8 41.1 398 265-692 19-469 (472)
6 PRK11241 gabD succinate-semial 100.0 1.1E-80 2.4E-85 694.6 40.9 398 265-691 31-481 (482)
7 PLN02419 methylmalonate-semial 100.0 1.9E-80 4E-85 697.5 40.8 399 265-693 134-591 (604)
8 PRK00197 proA gamma-glutamyl p 100.0 1.2E-78 2.7E-83 667.7 44.1 406 290-696 4-416 (417)
9 PLN02174 aldehyde dehydrogenas 100.0 3.2E-78 7E-83 669.2 42.1 382 288-692 8-445 (484)
10 TIGR03374 ABALDH 1-pyrroline d 100.0 2.2E-78 4.8E-83 675.8 40.0 397 265-690 21-471 (472)
11 PLN02766 coniferyl-aldehyde de 100.0 2.4E-78 5.2E-83 679.7 39.2 399 265-692 41-495 (501)
12 cd07079 ALDH_F18-19_ProA-GPR G 100.0 9.5E-78 2.1E-82 658.4 41.7 398 294-692 2-406 (406)
13 PRK13968 putative succinate se 100.0 6.7E-78 1.5E-82 670.9 41.0 397 265-691 12-460 (462)
14 PRK09406 gabD1 succinic semial 100.0 7.9E-78 1.7E-82 669.5 40.2 400 265-691 6-457 (457)
15 PLN02278 succinic semialdehyde 100.0 1.2E-77 2.7E-82 674.1 41.4 399 264-691 44-495 (498)
16 PLN02315 aldehyde dehydrogenas 100.0 8.3E-78 1.8E-82 674.1 39.1 403 264-692 38-495 (508)
17 PLN02466 aldehyde dehydrogenas 100.0 1.2E-77 2.7E-82 676.3 39.1 397 266-691 79-531 (538)
18 cd07113 ALDH_PADH_NahF Escheri 100.0 1.9E-77 4.1E-82 671.6 39.7 401 265-691 20-476 (477)
19 cd07140 ALDH_F1L_FTFDH 10-form 100.0 2.8E-77 6.2E-82 668.6 39.1 401 265-691 26-485 (486)
20 cd07559 ALDH_ACDHII_AcoD-like 100.0 4.3E-77 9.4E-82 668.1 39.2 397 265-691 21-479 (480)
21 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 6E-77 1.3E-81 668.0 40.3 396 265-691 21-478 (479)
22 cd07117 ALDH_StaphAldA1 Unchar 100.0 5.7E-77 1.2E-81 665.7 39.9 397 265-691 21-474 (475)
23 TIGR03216 OH_muco_semi_DH 2-hy 100.0 9.4E-77 2E-81 666.7 40.5 401 265-691 19-480 (481)
24 cd07130 ALDH_F7_AASADH NAD+-de 100.0 1.2E-76 2.6E-81 664.1 40.9 401 265-691 17-472 (474)
25 PRK13252 betaine aldehyde dehy 100.0 1.2E-76 2.6E-81 667.1 41.0 399 265-692 27-481 (488)
26 cd07142 ALDH_F2BC Arabidosis a 100.0 5.2E-77 1.1E-81 668.0 37.7 396 265-689 24-475 (476)
27 TIGR01780 SSADH succinate-semi 100.0 6.7E-77 1.5E-81 662.6 37.6 392 266-686 3-448 (448)
28 cd07086 ALDH_F7_AASADH-like NA 100.0 2.8E-76 6.1E-81 662.4 41.4 401 265-691 18-476 (478)
29 TIGR02299 HpaE 5-carboxymethyl 100.0 3.3E-76 7.2E-81 663.9 40.7 397 265-692 21-478 (488)
30 cd07090 ALDH_F9_TMBADH NAD+-de 100.0 2.6E-76 5.7E-81 660.5 39.4 398 266-693 3-457 (457)
31 PLN02467 betaine aldehyde dehy 100.0 2.7E-76 5.9E-81 662.6 39.6 401 265-692 28-489 (503)
32 cd07151 ALDH_HBenzADH NADP+-de 100.0 4.4E-76 9.6E-81 659.1 41.0 398 265-691 15-464 (465)
33 cd07107 ALDH_PhdK-like Nocardi 100.0 4E-76 8.7E-81 658.3 40.6 395 266-691 3-455 (456)
34 cd07085 ALDH_F6_MMSDH Methylma 100.0 4.4E-76 9.6E-81 661.3 40.1 400 265-691 21-477 (478)
35 cd07148 ALDH_RL0313 Uncharacte 100.0 4.6E-76 9.9E-81 656.7 39.5 399 265-690 4-455 (455)
36 cd07152 ALDH_BenzADH NAD-depen 100.0 1.1E-75 2.3E-80 653.0 40.9 391 270-690 1-443 (443)
37 cd07147 ALDH_F21_RNP123 Aldehy 100.0 9.5E-76 2.1E-80 655.5 40.1 399 265-690 4-452 (452)
38 cd07097 ALDH_KGSADH-YcbD Bacil 100.0 7.9E-76 1.7E-80 658.4 39.5 398 264-690 18-473 (473)
39 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 7.8E-76 1.7E-80 653.1 37.7 394 266-690 3-455 (455)
40 cd07110 ALDH_F10_BADH Arabidop 100.0 1.4E-75 3E-80 654.4 39.9 395 266-689 3-455 (456)
41 cd07101 ALDH_SSADH2_GabD2 Myco 100.0 1.4E-75 3.1E-80 653.5 39.5 396 266-690 2-454 (454)
42 PRK13473 gamma-aminobutyraldeh 100.0 1.5E-75 3.4E-80 656.9 39.6 399 265-692 22-474 (475)
43 cd07106 ALDH_AldA-AAD23400 Str 100.0 2.4E-75 5.2E-80 650.7 40.5 392 266-689 3-445 (446)
44 cd07145 ALDH_LactADH_F420-Bios 100.0 2E-75 4.3E-80 653.2 39.7 399 265-690 4-456 (456)
45 cd07094 ALDH_F21_LactADH-like 100.0 2.2E-75 4.8E-80 652.7 39.8 399 265-690 4-453 (453)
46 cd07143 ALDH_AldA_AN0554 Asper 100.0 2.2E-75 4.7E-80 653.9 39.6 397 266-691 28-480 (481)
47 cd07144 ALDH_ALD2-YMR170C Sacc 100.0 3.7E-75 8E-80 654.8 41.3 397 266-691 29-483 (484)
48 cd07150 ALDH_VaniDH_like Pseud 100.0 2.5E-75 5.5E-80 652.2 39.7 397 265-690 4-451 (451)
49 PTZ00381 aldehyde dehydrogenas 100.0 4.7E-75 1E-79 649.6 41.0 389 286-692 3-439 (493)
50 cd07109 ALDH_AAS00426 Uncharac 100.0 3.4E-75 7.3E-80 651.0 39.1 394 266-689 3-453 (454)
51 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0 4.1E-75 8.9E-80 653.4 39.0 397 265-690 27-480 (481)
52 PLN00412 NADP-dependent glycer 100.0 6.1E-75 1.3E-79 652.0 40.3 401 264-692 35-488 (496)
53 TIGR03250 PhnAcAld_DH putative 100.0 7E-75 1.5E-79 648.9 40.1 397 266-691 23-471 (472)
54 cd07119 ALDH_BADH-GbsA Bacillu 100.0 4.7E-75 1E-79 654.1 38.3 398 265-692 18-474 (482)
55 cd07118 ALDH_SNDH Gluconobacte 100.0 5.3E-75 1.2E-79 647.9 38.0 395 266-689 3-453 (454)
56 cd07089 ALDH_CddD-AldA-like Rh 100.0 8.3E-75 1.8E-79 647.3 39.1 399 266-690 3-459 (459)
57 PRK09457 astD succinylglutamic 100.0 2E-74 4.3E-79 647.7 42.1 397 265-692 20-471 (487)
58 cd07115 ALDH_HMSADH_HapE Pseud 100.0 1.3E-74 2.8E-79 646.1 40.4 397 266-691 3-452 (453)
59 TIGR01804 BADH glycine betaine 100.0 7.5E-75 1.6E-79 650.0 37.9 393 265-686 18-467 (467)
60 cd07124 ALDH_PutA-P5CDH-RocA D 100.0 2.2E-74 4.8E-79 651.2 41.7 426 234-691 12-511 (512)
61 cd07102 ALDH_EDX86601 Uncharac 100.0 1.9E-74 4.2E-79 645.3 40.2 395 266-689 2-451 (452)
62 cd07100 ALDH_SSADH1_GabD1 Myco 100.0 1.7E-74 3.7E-79 639.8 38.4 375 292-689 1-428 (429)
63 PRK09407 gabD2 succinic semial 100.0 3.2E-74 6.9E-79 650.3 41.3 397 267-692 39-492 (524)
64 TIGR01237 D1pyr5carbox2 delta- 100.0 2.9E-74 6.2E-79 649.5 40.7 399 265-691 51-510 (511)
65 PRK09847 gamma-glutamyl-gamma- 100.0 2.2E-74 4.7E-79 647.2 38.6 397 265-691 40-492 (494)
66 cd07123 ALDH_F4-17_P5CDH Delta 100.0 4.5E-74 9.8E-79 648.2 41.2 399 264-691 50-519 (522)
67 cd07131 ALDH_AldH-CAJ73105 Unc 100.0 5.4E-74 1.2E-78 645.3 41.6 398 266-692 20-477 (478)
68 PLN02203 aldehyde dehydrogenas 100.0 8.2E-74 1.8E-78 636.6 42.5 383 287-692 3-444 (484)
69 cd07088 ALDH_LactADH-AldA Esch 100.0 3.9E-74 8.4E-79 645.3 39.6 396 265-689 18-467 (468)
70 cd07091 ALDH_F1-2_Ald2-like AL 100.0 2.3E-74 5E-79 647.6 37.7 397 265-690 24-476 (476)
71 TIGR03240 arg_catab_astD succi 100.0 9.8E-74 2.1E-78 642.2 41.8 397 265-692 18-469 (484)
72 cd07108 ALDH_MGR_2402 Magnetos 100.0 5.8E-74 1.3E-78 641.6 39.2 394 266-690 3-457 (457)
73 TIGR01236 D1pyr5carbox1 delta- 100.0 6.6E-74 1.4E-78 646.1 39.8 400 264-692 50-521 (533)
74 TIGR01722 MMSDH methylmalonic 100.0 1E-73 2.2E-78 641.5 40.8 399 265-691 21-476 (477)
75 cd07138 ALDH_CddD_SSP0762 Rhod 100.0 1.1E-73 2.3E-78 640.5 40.6 391 265-689 19-465 (466)
76 cd07112 ALDH_GABALDH-PuuC Esch 100.0 5.9E-74 1.3E-78 640.9 38.1 396 266-690 8-462 (462)
77 cd07083 ALDH_P5CDH ALDH subfam 100.0 1.4E-73 3.1E-78 642.8 41.5 398 265-691 37-499 (500)
78 cd07146 ALDH_PhpJ Streptomyces 100.0 1E-73 2.2E-78 636.5 39.4 396 265-690 4-451 (451)
79 cd07099 ALDH_DDALDH Methylomon 100.0 1.3E-73 2.9E-78 638.7 40.1 396 266-689 2-452 (453)
80 PF00171 Aldedh: Aldehyde dehy 100.0 3E-74 6.6E-79 644.7 32.5 392 267-688 14-462 (462)
81 cd07139 ALDH_AldA-Rv0768 Mycob 100.0 1.8E-73 4E-78 639.9 38.6 395 265-689 19-470 (471)
82 cd07111 ALDH_F16 Aldehyde dehy 100.0 1.7E-73 3.6E-78 637.2 37.9 385 265-687 42-477 (480)
83 cd07105 ALDH_SaliADH Salicylal 100.0 2.3E-73 5.1E-78 631.8 38.7 379 291-690 1-432 (432)
84 cd07098 ALDH_F15-22 Aldehyde d 100.0 3.6E-73 7.8E-78 636.5 40.5 403 266-691 2-464 (465)
85 cd07125 ALDH_PutA-P5CDH Delta( 100.0 4.1E-73 8.8E-78 641.1 40.9 400 263-692 49-508 (518)
86 PRK03137 1-pyrroline-5-carboxy 100.0 3.5E-73 7.6E-78 641.1 39.9 396 264-690 54-512 (514)
87 cd07092 ALDH_ABALDH-YdcW Esche 100.0 3.7E-73 7.9E-78 634.7 39.3 394 266-689 3-449 (450)
88 cd07149 ALDH_y4uC Uncharacteri 100.0 5.8E-73 1.3E-77 634.2 40.3 398 265-689 4-452 (453)
89 cd07136 ALDH_YwdH-P39616 Bacil 100.0 4.2E-73 9.2E-78 626.8 37.9 379 294-693 2-429 (449)
90 cd07114 ALDH_DhaS Uncharacteri 100.0 4.6E-73 1E-77 634.3 38.2 396 266-690 3-457 (457)
91 cd07095 ALDH_SGSD_AstD N-succi 100.0 3.6E-73 7.8E-78 628.1 36.3 375 291-688 1-429 (431)
92 cd07135 ALDH_F14-YMR110C Sacch 100.0 1.1E-72 2.3E-77 624.0 37.5 381 288-689 3-435 (436)
93 cd07137 ALDH_F3FHI Plant aldeh 100.0 1.1E-72 2.4E-77 623.3 37.4 374 294-690 3-432 (432)
94 cd07103 ALDH_F5_SSADH_GabD Mit 100.0 1.4E-72 3.1E-77 630.4 38.6 395 266-689 3-450 (451)
95 TIGR02278 PaaN-DH phenylacetic 100.0 1.9E-72 4.1E-77 647.0 40.3 395 264-690 19-495 (663)
96 cd07104 ALDH_BenzADH-like ALDH 100.0 2.2E-72 4.7E-77 625.7 39.5 379 291-690 1-431 (431)
97 cd07082 ALDH_F11_NP-GAPDH NADP 100.0 2.5E-72 5.5E-77 631.0 39.9 400 265-691 21-473 (473)
98 cd07128 ALDH_MaoC-N N-terminal 100.0 1.4E-72 3.1E-77 630.9 37.8 390 265-689 20-502 (513)
99 cd07133 ALDH_CALDH_CalB Conife 100.0 2.5E-72 5.3E-77 622.0 38.0 376 294-689 2-433 (434)
100 cd07093 ALDH_F8_HMSADH Human a 100.0 3.7E-72 7.9E-77 627.5 39.5 396 266-690 3-455 (455)
101 TIGR00407 proA gamma-glutamyl 100.0 9.6E-72 2.1E-76 605.5 39.6 387 299-686 1-398 (398)
102 TIGR01238 D1pyr5carbox3 delta- 100.0 4.5E-72 9.8E-77 627.4 36.4 384 263-687 54-500 (500)
103 cd07126 ALDH_F12_P5CDH Delta(1 100.0 1.1E-71 2.3E-76 618.8 38.2 380 265-668 17-470 (489)
104 cd07132 ALDH_F3AB Aldehyde deh 100.0 1.8E-71 3.9E-76 616.1 39.9 381 294-692 2-428 (443)
105 cd07121 ALDH_EutE Ethanolamine 100.0 1.3E-71 2.7E-76 612.4 35.5 375 289-690 3-422 (429)
106 PRK11903 aldehyde dehydrogenas 100.0 3.8E-71 8.3E-76 621.3 37.9 395 265-690 24-506 (521)
107 PRK10090 aldehyde dehydrogenas 100.0 3.7E-71 8.1E-76 605.7 34.7 354 318-692 1-408 (409)
108 PRK11563 bifunctional aldehyde 100.0 8E-71 1.7E-75 638.1 37.9 394 265-691 24-508 (675)
109 KOG2456 Aldehyde dehydrogenase 100.0 3.2E-71 7E-76 562.3 30.1 382 292-692 4-433 (477)
110 PRK11904 bifunctional proline 100.0 2.1E-70 4.6E-75 650.6 42.2 429 236-692 535-1027(1038)
111 cd07134 ALDH_AlkH-like Pseudom 100.0 3.1E-70 6.7E-75 605.0 39.2 376 294-689 2-432 (433)
112 PRK15398 aldehyde dehydrogenas 100.0 1.2E-69 2.5E-74 601.3 37.8 377 288-692 34-454 (465)
113 cd07087 ALDH_F3-13-14_CALDH-li 100.0 5.7E-69 1.2E-73 594.8 39.0 376 294-689 2-425 (426)
114 PRK11809 putA trifunctional tr 100.0 5.1E-69 1.1E-73 643.0 37.3 383 265-687 664-1111(1318)
115 cd07129 ALDH_KGSADH Alpha-Keto 100.0 1.1E-68 2.3E-73 596.3 37.1 378 292-685 1-449 (454)
116 PRK11905 bifunctional proline 100.0 3E-68 6.5E-73 638.8 40.6 389 264-692 571-1019(1208)
117 cd07081 ALDH_F20_ACDH_EutE-lik 100.0 7.6E-68 1.6E-72 582.0 38.5 381 292-690 1-438 (439)
118 cd07084 ALDH_KGSADH-like ALDH 100.0 9.4E-68 2E-72 586.2 38.1 376 293-688 2-440 (442)
119 cd07077 ALDH-like NAD(P)+-depe 100.0 7.4E-67 1.6E-71 573.1 40.5 380 297-689 1-396 (397)
120 TIGR02518 EutH_ACDH acetaldehy 100.0 3.6E-66 7.7E-71 576.7 41.4 378 288-692 6-445 (488)
121 cd07122 ALDH_F20_ACDH Coenzyme 100.0 1.9E-65 4E-70 561.9 36.2 376 292-690 1-435 (436)
122 KOG2454 Betaine aldehyde dehyd 100.0 2.2E-66 4.9E-71 520.7 24.2 404 266-691 70-531 (583)
123 TIGR02288 PaaN_2 phenylacetic 100.0 5.8E-65 1.2E-69 568.4 38.1 394 266-689 71-544 (551)
124 PRK13805 bifunctional acetalde 100.0 3.2E-64 6.9E-69 598.9 39.9 386 285-692 7-451 (862)
125 cd07078 ALDH NAD(P)+ dependent 100.0 6.1E-63 1.3E-67 550.7 38.8 376 293-689 1-431 (432)
126 cd07127 ALDH_PAD-PaaZ Phenylac 100.0 5.2E-63 1.1E-67 554.2 38.3 391 290-690 84-545 (549)
127 cd06534 ALDH-SF NAD(P)+-depend 100.0 7.6E-61 1.7E-65 522.3 35.8 355 298-689 2-366 (367)
128 COG4230 Delta 1-pyrroline-5-ca 100.0 2.4E-58 5.1E-63 482.4 25.5 379 271-689 139-576 (769)
129 KOG2452 Formyltetrahydrofolate 100.0 2E-58 4.3E-63 472.7 22.2 365 288-691 457-880 (881)
130 COG0014 ProA Gamma-glutamyl ph 100.0 7.7E-55 1.7E-59 447.2 35.1 408 290-697 3-417 (417)
131 KOG2455 Delta-1-pyrroline-5-ca 100.0 2.2E-54 4.8E-59 441.4 23.3 386 285-690 91-546 (561)
132 KOG2453 Aldehyde dehydrogenase 100.0 2.3E-53 5.1E-58 419.7 19.0 390 288-695 53-497 (507)
133 KOG4165 Gamma-glutamyl phospha 100.0 3.9E-49 8.5E-54 389.9 33.6 421 292-712 2-429 (433)
134 cd04256 AAK_P5CS_ProBA AAK_P5C 100.0 1.4E-39 2.9E-44 337.4 26.0 272 5-277 2-283 (284)
135 KOG1154 Gamma-glutamyl kinase 100.0 1.8E-39 3.9E-44 308.5 23.4 279 4-286 2-282 (285)
136 PRK12314 gamma-glutamyl kinase 100.0 2.6E-39 5.7E-44 333.6 25.0 260 4-279 2-264 (266)
137 COG0263 ProB Glutamate 5-kinas 100.0 1E-38 2.2E-43 324.5 24.1 255 8-280 3-260 (369)
138 PRK13402 gamma-glutamyl kinase 100.0 1.2E-37 2.5E-42 332.4 25.3 254 8-280 2-258 (368)
139 cd04242 AAK_G5K_ProB AAK_G5K_P 100.0 1.2E-36 2.6E-41 312.7 25.4 248 13-278 1-251 (251)
140 PRK05429 gamma-glutamyl kinase 100.0 2.6E-36 5.7E-41 325.3 24.0 259 4-280 1-262 (372)
141 TIGR01027 proB glutamate 5-kin 100.0 1.8E-35 3.9E-40 317.5 25.2 252 12-280 1-254 (363)
142 PTZ00489 glutamate 5-kinase; P 100.0 2.8E-35 6.1E-40 301.0 25.3 254 4-280 1-260 (264)
143 COG0548 ArgB Acetylglutamate k 100.0 2.5E-32 5.5E-37 273.5 19.0 245 10-278 1-264 (265)
144 cd07080 ALDH_Acyl-CoA-Red_LuxC 100.0 2E-30 4.2E-35 285.8 24.8 319 292-642 26-389 (422)
145 cd04241 AAK_FomA-like AAK_FomA 100.0 5.4E-31 1.2E-35 271.7 18.4 242 13-277 1-252 (252)
146 PRK12353 putative amino acid k 100.0 1.2E-30 2.6E-35 274.2 21.2 251 10-278 1-313 (314)
147 COG1608 Predicted archaeal kin 100.0 4.4E-30 9.5E-35 248.3 20.1 244 14-278 3-251 (252)
148 cd04234 AAK_AK AAK_AK: Amino A 100.0 3.5E-30 7.5E-35 260.8 19.5 208 13-262 1-220 (227)
149 CHL00202 argB acetylglutamate 100.0 4.5E-30 9.7E-35 267.8 20.5 245 11-278 23-283 (284)
150 PLN02512 acetylglutamate kinas 100.0 9.7E-30 2.1E-34 267.9 21.5 246 10-278 46-308 (309)
151 COG0527 LysC Aspartokinases [A 100.0 4.3E-30 9.4E-35 280.2 19.4 239 11-280 1-290 (447)
152 TIGR00746 arcC carbamate kinas 100.0 2.6E-29 5.6E-34 261.6 22.0 246 12-278 1-309 (310)
153 cd04246 AAK_AK-DapG-like AAK_A 100.0 1.6E-29 3.4E-34 258.5 20.1 221 13-261 1-232 (239)
154 PRK00942 acetylglutamate kinas 100.0 1.3E-29 2.9E-34 265.4 19.6 244 10-279 22-282 (283)
155 PRK08841 aspartate kinase; Val 100.0 2.2E-29 4.7E-34 272.9 20.8 229 11-279 1-242 (392)
156 cd02115 AAK Amino Acid Kinases 100.0 6.6E-30 1.4E-34 263.6 15.2 239 15-277 1-248 (248)
157 cd04250 AAK_NAGK-C AAK_NAGK-C: 100.0 2.1E-29 4.6E-34 263.1 19.1 244 11-277 14-279 (279)
158 PRK14558 pyrH uridylate kinase 100.0 6.7E-29 1.4E-33 252.3 22.2 222 12-279 1-230 (231)
159 PRK14058 acetylglutamate/acety 100.0 1.4E-29 2.9E-34 262.6 17.3 236 13-279 1-267 (268)
160 cd04260 AAK_AKi-DapG-BS AAK_AK 100.0 1.6E-29 3.5E-34 258.6 17.5 221 13-261 1-237 (244)
161 cd04261 AAK_AKii-LysC-BS AAK_A 100.0 4.5E-29 9.8E-34 255.0 19.9 221 13-261 1-232 (239)
162 cd04237 AAK_NAGS-ABP AAK_NAGS- 100.0 3.6E-29 7.9E-34 260.2 18.5 243 11-277 18-280 (280)
163 PRK00358 pyrH uridylate kinase 100.0 1.1E-28 2.5E-33 251.0 21.7 228 12-277 1-230 (231)
164 PRK14556 pyrH uridylate kinase 100.0 1.7E-28 3.7E-33 245.8 22.5 232 5-278 9-247 (249)
165 PRK12454 carbamate kinase-like 100.0 3.9E-28 8.4E-33 250.3 24.1 251 10-278 1-312 (313)
166 PRK12686 carbamate kinase; Rev 100.0 2E-28 4.3E-33 253.2 20.6 251 10-278 1-311 (312)
167 cd04239 AAK_UMPK-like AAK_UMPK 100.0 2.3E-28 4.9E-33 248.2 20.8 227 13-277 1-228 (229)
168 cd04235 AAK_CK AAK_CK: Carbama 100.0 3.2E-28 7E-33 251.6 20.1 246 13-277 1-307 (308)
169 PRK12352 putative carbamate ki 100.0 5.6E-28 1.2E-32 251.9 21.7 258 10-279 1-315 (316)
170 TIGR00656 asp_kin_monofn aspar 100.0 2.1E-28 4.5E-33 269.6 18.9 234 12-279 1-243 (401)
171 COG0528 PyrH Uridylate kinase 100.0 6.8E-28 1.5E-32 233.8 18.8 228 9-278 3-237 (238)
172 cd04254 AAK_UMPK-PyrH-Ec UMP k 100.0 9E-28 2E-32 243.8 20.5 227 12-277 1-230 (231)
173 PRK14557 pyrH uridylate kinase 100.0 3.2E-27 6.8E-32 239.9 24.2 234 8-281 1-240 (247)
174 PRK05279 N-acetylglutamate syn 100.0 4.6E-28 9.9E-33 269.6 19.6 261 11-296 25-309 (441)
175 TIGR02075 pyrH_bact uridylate 100.0 2.5E-27 5.4E-32 240.7 21.6 228 11-277 1-232 (233)
176 cd04249 AAK_NAGK-NC AAK_NAGK-N 100.0 5.8E-28 1.3E-32 248.8 16.7 237 14-277 1-252 (252)
177 cd04238 AAK_NAGK-like AAK_NAGK 100.0 6.7E-28 1.4E-32 249.1 16.7 237 14-277 1-256 (256)
178 PRK08210 aspartate kinase I; R 100.0 1.3E-27 2.8E-32 263.0 19.5 232 11-280 1-248 (403)
179 cd04244 AAK_AK-LysC-like AAK_A 100.0 3.7E-27 7.9E-32 246.6 20.2 233 13-277 1-297 (298)
180 TIGR01890 N-Ac-Glu-synth amino 99.9 7E-27 1.5E-31 258.9 22.2 260 11-299 17-300 (429)
181 cd04245 AAK_AKiii-YclM-BS AAK_ 99.9 3.8E-27 8.2E-32 243.9 18.4 230 14-277 2-287 (288)
182 PRK06635 aspartate kinase; Rev 99.9 3.3E-27 7.2E-32 260.3 18.9 232 11-280 1-243 (404)
183 cd04251 AAK_NAGK-UC AAK_NAGK-U 99.9 1.9E-27 4.1E-32 244.8 14.2 226 14-277 1-257 (257)
184 cd04252 AAK_NAGK-fArgBP AAK_NA 99.9 6.6E-27 1.4E-31 239.6 17.9 232 15-277 2-248 (248)
185 TIGR00761 argB acetylglutamate 99.9 5.1E-27 1.1E-31 238.9 16.2 216 13-255 1-231 (231)
186 cd04257 AAK_AK-HSDH AAK_AK-HSD 99.9 8.6E-27 1.9E-31 242.8 17.8 232 14-277 2-293 (294)
187 cd04236 AAK_NAGS-Urea AAK_NAGS 99.9 4.3E-27 9.4E-32 240.4 14.9 222 11-277 35-271 (271)
188 PRK07431 aspartate kinase; Pro 99.9 1.5E-26 3.3E-31 266.0 19.2 233 11-280 1-245 (587)
189 PF00696 AA_kinase: Amino acid 99.9 5.4E-27 1.2E-31 241.0 13.8 230 12-257 1-242 (242)
190 cd04243 AAK_AK-HSDH-like AAK_A 99.9 1.4E-26 3.1E-31 241.0 16.8 232 13-277 1-292 (293)
191 cd04255 AAK_UMPK-MosAB AAK_UMP 99.9 5.2E-26 1.1E-30 233.1 20.6 229 11-277 30-261 (262)
192 cd04259 AAK_AK-DapDC AAK_AK-Da 99.9 3.8E-26 8.2E-31 237.8 19.3 234 13-277 1-294 (295)
193 PRK08373 aspartate kinase; Val 99.9 3.5E-26 7.5E-31 241.3 18.9 226 9-261 1-271 (341)
194 PRK12354 carbamate kinase; Rev 99.9 7.1E-26 1.5E-30 233.0 19.1 246 12-280 1-301 (307)
195 TIGR00657 asp_kinases aspartat 99.9 3.5E-26 7.7E-31 254.3 18.2 243 12-280 1-284 (441)
196 cd04258 AAK_AKiii-LysC-EC AAK_ 99.9 1E-25 2.3E-30 233.6 19.0 230 13-277 1-291 (292)
197 PRK09084 aspartate kinase III; 99.9 1.1E-25 2.3E-30 249.2 18.4 235 13-279 1-289 (448)
198 PLN02551 aspartokinase 99.9 1.4E-25 3E-30 250.1 19.1 237 11-280 51-349 (521)
199 TIGR02076 pyrH_arch uridylate 99.9 4.3E-25 9.4E-30 223.0 20.5 218 14-277 1-220 (221)
200 cd04253 AAK_UMPK-PyrH-Pf AAK_U 99.9 3.9E-25 8.5E-30 223.1 19.6 215 13-277 1-220 (221)
201 PRK06291 aspartate kinase; Pro 99.9 3.5E-25 7.7E-30 246.9 20.3 237 13-280 2-304 (465)
202 cd04247 AAK_AK-Hom3 AAK_AK-Hom 99.9 2.5E-25 5.4E-30 231.7 17.6 234 13-279 2-305 (306)
203 TIGR02078 AspKin_pair Pyrococc 99.9 2E-25 4.4E-30 234.2 15.4 236 13-279 1-270 (327)
204 PRK09034 aspartate kinase; Rev 99.9 3.6E-25 7.8E-30 245.6 18.0 234 13-280 1-290 (454)
205 PRK09411 carbamate kinase; Rev 99.9 2.9E-24 6.3E-29 219.0 20.6 243 11-278 1-296 (297)
206 PRK05925 aspartate kinase; Pro 99.9 5.6E-25 1.2E-29 241.1 15.8 235 11-280 1-281 (440)
207 PLN02825 amino-acid N-acetyltr 99.9 2.4E-24 5.2E-29 238.1 20.9 249 10-280 16-365 (515)
208 COG0549 ArcC Carbamate kinase 99.9 4E-24 8.6E-29 211.1 20.0 250 12-278 1-311 (312)
209 PRK04531 acetylglutamate kinas 99.9 7.2E-24 1.6E-28 228.9 20.0 212 11-280 36-250 (398)
210 PRK09466 metL bifunctional asp 99.9 2.3E-24 5E-29 251.8 17.4 236 10-279 9-300 (810)
211 PRK09436 thrA bifunctional asp 99.9 1.6E-22 3.4E-27 238.5 18.2 235 13-279 1-297 (819)
212 PRK08961 bifunctional aspartat 99.9 2.2E-22 4.9E-27 239.9 16.4 231 10-262 6-297 (861)
213 cd04248 AAK_AK-Ectoine AAK_AK- 99.9 1.4E-21 3E-26 200.5 16.1 161 90-277 134-303 (304)
214 PRK09181 aspartate kinase; Val 99.9 1.3E-21 2.8E-26 216.3 13.8 160 90-279 140-311 (475)
215 KOG0456 Aspartate kinase [Amin 99.8 1.7E-19 3.7E-24 183.5 11.5 239 13-280 80-376 (559)
216 cd04240 AAK_UC AAK_UC: Unchara 99.8 5.9E-19 1.3E-23 174.9 14.1 202 15-277 1-203 (203)
217 COG2054 Uncharacterized archae 99.5 1.4E-13 3E-18 127.4 13.8 206 15-279 3-210 (212)
218 PF05893 LuxC: Acyl-CoA reduct 99.5 5.1E-11 1.1E-15 130.1 30.9 246 395-643 81-369 (399)
219 KOG2436 Acetylglutamate kinase 99.0 8.6E-10 1.9E-14 118.0 9.2 245 11-280 95-360 (520)
220 KOG2449 Methylmalonate semiald 98.8 2.2E-09 4.9E-14 94.9 2.1 78 584-661 76-154 (157)
221 PF07368 DUF1487: Protein of u 98.7 1.5E-07 3.2E-12 91.8 13.2 173 512-692 6-211 (215)
222 PRK11905 bifunctional proline 97.7 9.8E-05 2.1E-09 91.1 9.6 103 390-509 1067-1175(1208)
223 PF00815 Histidinol_dh: Histid 97.1 0.1 2.2E-06 56.8 22.2 286 361-690 68-378 (412)
224 TIGR00069 hisD histidinol dehy 96.5 0.41 8.9E-06 51.7 21.3 282 362-690 52-361 (393)
225 cd06572 Histidinol_dh Histidin 96.5 0.57 1.2E-05 50.8 22.0 285 362-690 56-365 (390)
226 COG0141 HisD Histidinol dehydr 96.3 0.23 5.1E-06 53.6 18.0 281 362-688 80-386 (425)
227 PRK12447 histidinol dehydrogen 96.3 0.67 1.5E-05 50.6 21.5 281 362-690 77-387 (426)
228 PLN02926 histidinol dehydrogen 96.3 0.61 1.3E-05 51.0 20.9 285 362-690 83-395 (431)
229 PRK00877 hisD bifunctional his 96.2 0.6 1.3E-05 51.1 20.6 280 362-690 84-392 (425)
230 PRK13770 histidinol dehydrogen 96.2 0.8 1.7E-05 49.8 21.4 280 362-690 76-382 (416)
231 PRK13769 histidinol dehydrogen 96.2 2.2 4.8E-05 45.8 25.0 272 362-690 58-341 (368)
232 PRK11809 putA trifunctional tr 80.9 3 6.6E-05 52.6 6.7 93 391-499 1177-1269(1318)
233 KOG2697 Histidinol dehydrogena 68.5 1.5E+02 0.0032 30.9 13.7 232 391-651 116-365 (446)
234 COG1778 Low specificity phosph 65.4 28 0.00061 32.8 7.3 57 190-265 10-66 (170)
235 PF03437 BtpA: BtpA family; I 61.2 20 0.00043 36.9 6.3 108 182-300 135-253 (254)
236 TIGR01689 EcbF-BcbF capsule bi 48.7 29 0.00064 31.6 4.6 48 11-59 1-49 (126)
237 TIGR02726 phenyl_P_delta pheny 46.0 63 0.0014 31.0 6.7 64 190-274 9-74 (169)
238 COG0279 GmhA Phosphoheptose is 44.4 1.8E+02 0.004 27.8 9.1 112 33-150 25-141 (176)
239 PTZ00174 phosphomannomutase; P 41.1 46 0.001 34.0 5.3 43 11-58 5-47 (247)
240 COG0434 SgcQ Predicted TIM-bar 40.6 65 0.0014 32.6 5.8 64 237-302 194-260 (263)
241 PF05706 CDKN3: Cyclin-depende 40.3 3.4E+02 0.0074 26.0 10.4 102 36-185 58-159 (168)
242 PF13376 OmdA: Bacteriocin-pro 39.0 44 0.00096 26.2 3.7 35 289-323 7-41 (63)
243 PF10686 DUF2493: Protein of u 36.6 53 0.0012 26.6 3.9 44 13-65 4-48 (71)
244 PRK10513 sugar phosphate phosp 36.2 57 0.0012 33.5 5.1 45 10-59 2-46 (270)
245 PRK01158 phosphoglycolate phos 35.3 63 0.0014 32.2 5.2 45 10-59 2-46 (230)
246 PF07045 DUF1330: Protein of u 34.7 47 0.001 26.2 3.2 56 553-618 4-61 (65)
247 PF06945 DUF1289: Protein of u 34.1 49 0.0011 24.9 3.0 22 304-325 28-49 (51)
248 PRK15126 thiamin pyrimidine py 33.1 70 0.0015 33.0 5.2 44 10-58 1-44 (272)
249 PRK10976 putative hydrolase; P 31.6 77 0.0017 32.5 5.2 44 10-58 1-44 (266)
250 PRK10530 pyridoxal phosphate ( 31.2 83 0.0018 32.2 5.4 43 10-57 2-44 (272)
251 TIGR01684 viral_ppase viral ph 30.9 1E+02 0.0022 32.5 5.7 50 9-61 124-174 (301)
252 cd01390 HMGB-UBF_HMG-box HMGB- 30.6 1.3E+02 0.0027 23.2 5.2 36 297-332 30-65 (66)
253 COG1058 CinA Predicted nucleot 29.7 2E+02 0.0042 29.7 7.5 67 102-188 24-90 (255)
254 COG5470 Uncharacterized conser 28.8 1.1E+02 0.0024 26.2 4.6 56 554-619 19-76 (96)
255 PHA03398 viral phosphatase sup 27.3 1.2E+02 0.0026 32.0 5.5 48 10-60 127-175 (303)
256 COG1623 Predicted nucleic-acid 26.8 4.7E+02 0.01 27.4 9.4 72 166-257 53-126 (349)
257 PF09011 HMG_box_2: HMG-box do 26.6 1.7E+02 0.0037 23.4 5.3 36 297-332 34-69 (73)
258 PRK12595 bifunctional 3-deoxy- 26.5 2.7E+02 0.0059 30.3 8.4 48 171-224 299-348 (360)
259 PRK00192 mannosyl-3-phosphogly 26.5 83 0.0018 32.6 4.4 46 9-59 2-47 (273)
260 COG4430 Uncharacterized protei 25.0 1.3E+02 0.0028 29.3 4.9 111 174-325 64-175 (200)
261 COG0561 Cof Predicted hydrolas 24.9 1.1E+02 0.0024 31.2 5.0 46 9-59 1-46 (264)
262 PLN02645 phosphoglycolate phos 22.9 1.1E+02 0.0025 32.3 4.7 52 4-61 21-72 (311)
263 PLN03017 trehalose-phosphatase 22.7 2.4E+02 0.0052 30.7 7.0 65 176-268 99-166 (366)
264 PRK03669 mannosyl-3-phosphogly 22.6 1.1E+02 0.0024 31.6 4.4 44 11-59 7-50 (271)
265 COG0166 Pgi Glucose-6-phosphat 21.9 4.9E+02 0.011 29.2 9.4 143 171-326 88-254 (446)
266 PF00505 HMG_box: HMG (high mo 21.5 2E+02 0.0042 22.4 4.7 34 299-332 32-65 (69)
267 PLN02151 trehalose-phosphatase 21.4 2.7E+02 0.0059 30.2 7.1 66 177-269 87-154 (354)
268 cd01388 SOX-TCF_HMG-box SOX-TC 21.4 2.3E+02 0.005 22.6 5.2 33 299-331 33-65 (72)
269 PRK15126 thiamin pyrimidine py 21.4 1.8E+02 0.004 29.8 5.8 28 241-268 26-53 (272)
270 smart00398 HMG high mobility g 21.3 2.6E+02 0.0055 21.6 5.4 34 299-332 33-66 (70)
271 PF03295 Pox_TAA1: Poxvirus tr 20.6 1.1E+02 0.0025 23.7 2.8 41 588-628 8-51 (63)
272 PF07942 N2227: N2227-like pro 20.2 1.9E+02 0.0041 30.1 5.4 46 283-328 2-47 (270)
No 1
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=100.00 E-value=8.2e-122 Score=1060.96 Aligned_cols=712 Identities=83% Similarity=1.232 Sum_probs=622.9
Q ss_pred CcchhhhhhccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccc
Q 005131 1 MDSSRAFVKDVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADL 80 (713)
Q Consensus 1 ~~~~~~~~~~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~ 80 (713)
|+++|..|++|+++|||||||+|++.++.++.+.+.+++++|+.+++.|+++|||+||+..+|+..+......+....++
T Consensus 5 ~~~~~~~~~~~~~iViK~G~ssl~~~~~~~~~~~i~~l~~~i~~l~~~g~~vvlVsSga~~~g~~~l~~~~~~~~~~~~~ 84 (718)
T PLN02418 5 EDRSRAFLRDVKRVVIKVGTAVVTRDDGRLALGRLGALCEQIKELNSDGYEVILVSSGAVGVGRQRLRYRRLVNSSFADL 84 (718)
T ss_pred ccchhhHHhhCCEEEEEeCCCeecCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEecchHHHHHHHHhhhhhhhcccccC
Confidence 56778778889999999999999998888999999999999999999999999999999999998877544322112222
Q ss_pred cCccccchHHHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCC
Q 005131 81 QKPQIELDGKACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRK 160 (713)
Q Consensus 81 ~~~~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~ 160 (713)
......+.++++.++||..+..++...|++.|+.++|+++|++++.+...+.+..+.|+.+|+.|.|||++++|.|....
T Consensus 85 ~~~~~~~~~qa~aa~Gq~~l~~~~~~~f~~~g~~~~qillT~~~~~~~~~~~~~~~~l~~ll~~g~iPVv~~nd~v~~~~ 164 (718)
T PLN02418 85 QKPQMELDGKACAAVGQSELMALYDTLFSQLDVTASQLLVTDSDFRDPDFRKQLSETVESLLDLRVIPIFNENDAVSTRR 164 (718)
T ss_pred CCCcchHHHHHHHHhhHHHHHHHHHHHHHHcCCeEEEEEecHhHhcchhHhHhHHHHHHHHHHCCCEEEEcCCCCccccc
Confidence 11222445679999999999999999999999999999999999998888888889999999999999999989888753
Q ss_pred CcccCCCCcccchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHH
Q 005131 161 APYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKV 240 (713)
Q Consensus 161 ~~~~~~~g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl 240 (713)
..+....+.++|+|++|++||.+++||+|+|+|||||||++||.++++++|++++..+....+..+..+.+++|||.+||
T Consensus 165 ~~~~~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~~i~~~~~s~~~tGGM~~Kl 244 (718)
T PLN02418 165 APYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQDEITFGEKSRVGRGGMTAKV 244 (718)
T ss_pred cccccccCeecCcHHHHHHHHHHcCCCEEEEeecCCeeecCCCCCCCceEcceecccchhhhhhcccccccCCCCcHHHH
Confidence 32222233458899999999999999999999999999999996689999999987776555555555668999999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 005131 241 KAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLD 320 (713)
Q Consensus 241 ~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~ 320 (713)
+++..+.++|++++|++++.|+.+.+++.|+..||++.++.|.|.+...+++++++++|++||+.|+++|+++|.++|++
T Consensus 245 ~Aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~~~~~~~~~~~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~ 324 (718)
T PLN02418 245 KAAVNAASAGIPVVITSGYALDNIRKVLRGERVGTLFHQDAHLWAPSKEVGAREMAVAARESSRKLQALSSEERKKILLD 324 (718)
T ss_pred HHHHHHHHCCCcEEEeCCCCcchHHHHhcCCCCceEeccccchhhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988888886445699999999999999999999999999999
Q ss_pred HHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhcccCccccccccccccCCceeeeeec
Q 005131 321 IADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSC 400 (713)
Q Consensus 321 ~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (713)
++++|+++.++|+..+.+|+..++..|..+++.+++..+..|+..+++.+++++...++.++..+......+...++.++
T Consensus 325 ~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~r~ 404 (718)
T PLN02418 325 VADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADMEDPIGRVLKRTEVADGLVLEKTSC 404 (718)
T ss_pred HHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcCccccCccccccccCCCceEEEEEE
Confidence 99999999999999887766666666655555565555557999999999999986555555433111123445788999
Q ss_pred cceeEEEEecCCchHHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCC
Q 005131 401 PLGVLLIVFESRPDALVQIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDV 480 (713)
Q Consensus 401 P~GVv~~I~p~~P~~~~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~ 480 (713)
|+|||++|+||+|++++++++|||++||+||+|||+.||+++..+++++.++||+|+++.++|+|+|+++++++|..||+
T Consensus 405 PlGVV~~I~PwnP~~~~~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eAlP~gv~~~v~nvv~g~~~~g~~L~~~~~ 484 (718)
T PLN02418 405 PLGVLLIIFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITDAIPKTVGGKLIGLVTSRDEIPDLLKLDDV 484 (718)
T ss_pred eeeEEEEEeCCCcHHHHHHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHHccccCCcceEEEeCCcHHHHHHHhhCCC
Confidence 99999999999999888999999999999999999999999999999999998888777799999986678999999999
Q ss_pred ccEEEecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCCCHHHHHHHH-HHccCCCCCccccCceEEEcCCCchh-HHH
Q 005131 481 IDLVIPRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSADMDMAKQIV-LDAKVDYPAACNAMETLLIHQDLVPT-GFN 558 (713)
Q Consensus 481 v~~v~fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dADl~~A~~~~-~~~~~~~GQ~C~a~~rv~V~~~i~d~-fi~ 558 (713)
||+|+||||++.++++++.+.||+++|||||||+||++|||++.|++.+ +++|.| ||.|+|++|+|||+++||+ .+.
T Consensus 485 v~~V~FTGSt~~i~~~aa~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~G~~~ 563 (718)
T PLN02418 485 IDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQNGGLN 563 (718)
T ss_pred CCEEEEeCCHHHHHHHHHhcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEeccccccccHH
Confidence 9999999999999999888899999999999999999999999996555 555556 9999999999999999999 889
Q ss_pred HHHHHHHhCCCEEEcCCccccccCCCCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhc
Q 005131 559 ELIDNLRSEGVTLYGGPRASSLLNIPEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQ 638 (713)
Q Consensus 559 ~l~~~~~~~Ga~l~gg~~~~~~~~v~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~ 638 (713)
.++++++++|++++||.+...++.+++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+|+++
T Consensus 564 ~~i~~a~~~Ga~l~Gg~~~~g~l~~~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~ 643 (718)
T PLN02418 564 DLLVALRSAGVTLYGGPRASKLLNIPEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQ 643 (718)
T ss_pred HHHHHHHHCCCEEECCccccCeeCCCCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHh
Confidence 99999999999998886532344468899999999999999999999999999999999999999999999999999999
Q ss_pred cCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEECCCeeecCCCCcccccccccCCC
Q 005131 639 VDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGSGQVVDGDKGVEYIHEDVNIES 713 (713)
Q Consensus 639 l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (713)
+++|.||||+++...+..||||+|+||+|.++.|++|++||++||++|+|+++.|++|++++...|-|-++|+.|
T Consensus 644 l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g~~~~~~~~~~~~~~~~~~~~ 718 (718)
T PLN02418 644 VDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNGQVVDGDKGVVYTHKDLPLQS 718 (718)
T ss_pred CCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCCeecCCCCCcccccccccCCC
Confidence 999999999987777788999999999932234456999999999999999999999999999999999999875
No 2
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=100.00 E-value=3.2e-121 Score=1058.79 Aligned_cols=707 Identities=74% Similarity=1.120 Sum_probs=634.6
Q ss_pred hhhhccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccc
Q 005131 6 AFVKDVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQI 85 (713)
Q Consensus 6 ~~~~~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~ 85 (713)
..|+.++++|||||||+|+++++.++.+.+.+++++|+.+++.|+++|||+||+.++|+..+..+...+..+..++....
T Consensus 2 ~~~~~~~~iViKiGss~lt~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVsSGA~a~G~~~~~~~~~~~~~~~~~~~~~~ 81 (715)
T TIGR01092 2 AFLKDVKRIVVKVGTAVVTRGDGRLALGRLGSICEQLSELNSDGREVILVTSGAVAFGRQRLRHRILVNSSFADLQKPQP 81 (715)
T ss_pred chhhcCCEEEEEeCcceeECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEccchHHhchHHhccchhccccccccCCCCc
Confidence 34566899999999999999888899999999999999999999999999999999999987765443323333444555
Q ss_pred cchHHHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccC
Q 005131 86 ELDGKACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYED 165 (713)
Q Consensus 86 ~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~ 165 (713)
.++++++.++||..++.++...|.+.++.+.|+++|++|+.+...+.+..+.|+.+|+.|+|||+++||.|.+.+..+.+
T Consensus 82 ~~~~qa~aa~gq~~L~~~y~~~f~~~~i~~aQ~Llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVin~nD~V~~~~~~~~~ 161 (715)
T TIGR01092 82 ELDGKACAAVGQSGLMALYETMFTQLDITAAQILVTDLDFRDEQFRRQLNETVHELLRMNVVPVVNENDAVSTRAAPYSD 161 (715)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCeeEEEEechhhcccHHHHHHHHHHHHHHHHCCCEEEEcCCCccccccccccc
Confidence 67889999999999999999999999999999999999999999988889999999999999999999999987654433
Q ss_pred CCCcccchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHH
Q 005131 166 SSGIFWDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVN 245 (713)
Q Consensus 166 ~~g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~ 245 (713)
..+.++|+|++|+.||.+|+||+|+|+|||||||++||.+|++++|++++..+..+.+.++..+.+++|||.+||+++..
T Consensus 162 ~~g~~~d~D~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~~~~~~~tGGM~~Kl~aa~~ 241 (715)
T TIGR01092 162 SQGIFWDNDSLAALLALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFGTKSRLGRGGMTAKVKAAVW 241 (715)
T ss_pred ccceecchHHHHHHHHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccCcccccCCCCchHHHHHHHH
Confidence 34457999999999999999999999999999999999778999999999876664565665566889999999999999
Q ss_pred HHHcCCcEEEEeCCCchhHHHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 005131 246 AAYAGIPVVITSGYSDENILKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADAL 325 (713)
Q Consensus 246 a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l 325 (713)
+.++|++++|+++..|+.+.+++.|+..||.+.++.+-|...-.++++.++++|++||++|+++|.++|.++|++++++|
T Consensus 242 a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~~~~~~~~~~~~~~~~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l 321 (715)
T TIGR01092 242 AAYGGTPVIIASGTAPKNITKVVEGKKVGTLFHEDAHLWPTVEQTGERDMAVAARESSRMLQALSSEQRKEILHDIADAL 321 (715)
T ss_pred HHHCCCeEEEeCCCCcchHHHHhcCCCCceEecccchhhhhhhHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887555532211348999999999999999999999999999999999
Q ss_pred HHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhcccCccccccccccccCCceeeeeeccceeE
Q 005131 326 EANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVL 405 (713)
Q Consensus 326 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 405 (713)
++|+++|+.+++||+.+++.+++.+.+.+|+.++..|++.+++.+++|++..++.++..+......+...+.+++|+|||
T Consensus 322 ~~~~eei~~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV 401 (715)
T TIGR01092 322 EDNEDEILAENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVL 401 (715)
T ss_pred HHHHHHHHHHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEE
Confidence 99999999999999999987777778899999999999999999999998555555544322222344567899999999
Q ss_pred EEEecCCchHHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEE
Q 005131 406 LIVFESRPDALVQIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVI 485 (713)
Q Consensus 406 ~~I~p~~P~~~~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~ 485 (713)
++|+||+|+.+.++++|||++||+||+|||+.||.|+.++++++.++||++.|++++|+|+|.++++++|..||+||+|+
T Consensus 402 ~~I~PwNP~~~~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~alp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~ 481 (715)
T TIGR01092 402 LIVFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEAIPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVI 481 (715)
T ss_pred EEEeCCChHHHHHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHHcCCCCCCcEEEEeCChHHHHHHHhcCCCccEEE
Confidence 99999999888899999999999999999999999999999999999998888999999997677899999999999999
Q ss_pred ecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCCCHHHHHHHHHHccCCCCCccccCceEEEcCCCchh-HHHHHHHHH
Q 005131 486 PRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSADMDMAKQIVLDAKVDYPAACNAMETLLIHQDLVPT-GFNELIDNL 564 (713)
Q Consensus 486 fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dADl~~A~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~-fi~~l~~~~ 564 (713)
||||+++|+.|++++.+|+++|||||||+||++|||++.|+++++.++|++||.|+|++|||||+++||+ +++++++.+
T Consensus 482 fTGS~~vG~~i~~~A~~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~GQ~C~a~~rvlV~~~i~d~~~~~~~v~~~ 561 (715)
T TIGR01092 482 PRGSNKLVSQIKKSTKIPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDYPAACNAMETLLVHKDLLRNGLLDDLIDML 561 (715)
T ss_pred EcCCHHHHHHHHHhCCCCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCCCCccccCcEEEEehhhccchhHHHHHHHH
Confidence 9999999999998888999999999999999999999999999999999889999999999999999998 889999999
Q ss_pred HhCCCEEEcCCccccccCC--CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCee
Q 005131 565 RSEGVTLYGGPRASSLLNI--PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSA 642 (713)
Q Consensus 565 ~~~Ga~l~gg~~~~~~~~v--~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G 642 (713)
+++|++++||.+...|+.+ ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+|++++++|
T Consensus 562 ~~~Ga~l~Gg~~~~~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG 641 (715)
T TIGR01092 562 RTEGVTIHGGPRFAAYLTFNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSA 641 (715)
T ss_pred HHCCCEEECCcchhheeccCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCee
Confidence 9999999988653334432 78999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEECCCeeecCCCCcccccccccCC
Q 005131 643 AVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGSGQVVDGDKGVEYIHEDVNIE 712 (713)
Q Consensus 643 ~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~~~~~~ 712 (713)
.||||+++...+.+||||+|+||+|+++.|++|++|+++||+.|+|.++.|++|+++....|-|-++||.
T Consensus 642 ~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g~~~~~~~~~~~~~~~~~~~ 711 (715)
T TIGR01092 642 AVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKGQVVSGDHGLVYTHKDLPIP 711 (715)
T ss_pred EEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCCeecCCCCCcceecccCCcc
Confidence 9999998777778999999999999877778999999999999999999999999888999999999984
No 3
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.1e-85 Score=693.59 Aligned_cols=400 Identities=19% Similarity=0.232 Sum_probs=358.4
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSR--RLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
++.+|+.++++...+ .+||++|+++||+||+ .|++++..+|.++|+++|+++++++++|+....++-|++
T Consensus 42 nP~tg~~i~~v~~~~--------~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp 113 (501)
T KOG2450|consen 42 NPATGEVIAKVAEAT--------EEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKP 113 (501)
T ss_pred cCCCCCeEEEecccc--------HHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCc
Confidence 355788888777664 9999999999999999 799999999999999999999999999996555555554
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhccc-CccccccccccccCCceeeeeeccceeEEEEecC-CchHH-HHHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLANME-DPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDAL-VQIA 420 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~~~ 420 (713)
..+++ ..+|..+++.+|||+... ..++...+. ......|++++|+|||+.|+|| ||+++ .||+
T Consensus 114 ~~~a~-----------~~Dl~~~~~~~ry~ag~ad~~~~~~~~~---~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl 179 (501)
T KOG2450|consen 114 YPEAL-----------VSDLPPAIDCFRYYAGWADKIHGSTIPT---DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL 179 (501)
T ss_pred chhhh-----------hcCchhhhhHHHhhccchhhcccccCCC---CCceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence 43321 157889999999999843 333444432 2456889999999999999999 99999 5999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
+|||++||+||+||++++|+|+..+++++.++ |+|+||+|+|+| +.++++.|.+||+|++|+||||+.+|+.|+.+
T Consensus 180 aPALa~GNtvV~Kpae~tplsal~~~~l~~ea---G~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~a 256 (501)
T KOG2450|consen 180 APALAAGNTVVLKPAEQTPLTALYLASLCKEA---GFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEA 256 (501)
T ss_pred hhHHhhCcEEEecCCCCCCchHHHHHHHhHHh---cCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhh
Confidence 99999999999999999999999999999999 999999999998 68899999999999999999999999999987
Q ss_pred c----CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH--------------
Q 005131 500 T----KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL-------------- 560 (713)
Q Consensus 500 ~----~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l-------------- 560 (713)
+ .||++||||||+|.||++|||+|.| ..++.+.|+|+||.|++.+|+|||++|||+|++++
T Consensus 257 aa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~ 336 (501)
T KOG2450|consen 257 AAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPF 336 (501)
T ss_pred hhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCC
Confidence 5 5999999999999999999999999 55667779999999999999999999999999977
Q ss_pred ---------------------HHHHHhCCCEE-EcCCcc---cccc------CC-CCCCCccccccCceEEEEEeCCHHH
Q 005131 561 ---------------------IDNLRSEGVTL-YGGPRA---SSLL------NI-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 561 ---------------------~~~~~~~Ga~l-~gg~~~---~~~~------~v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
++.++++||++ +||.+. ++|+ +| ++|.+++||+||||++|++|++.||
T Consensus 337 ~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE 416 (501)
T KOG2450|consen 337 DEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEE 416 (501)
T ss_pred CcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHH
Confidence 46778999999 888663 4554 24 7999999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
+|+++|++.|||+++|||+|.++++++++++++|+||||++...+..+||||+|+||+|| +.|.+++++||+.|+|
T Consensus 417 ~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GR----E~g~~~l~~ytevKtv 492 (501)
T KOG2450|consen 417 VIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGR----ELGEYGLEAYTEVKTV 492 (501)
T ss_pred HHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCc----cccHHHHhhcceeeEE
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred EECCCe
Q 005131 689 LKGSGQ 694 (713)
Q Consensus 689 ~~~~~~ 694 (713)
+++.++
T Consensus 493 ~v~~~~ 498 (501)
T KOG2450|consen 493 TVKLPQ 498 (501)
T ss_pred EEeCCC
Confidence 987653
No 4
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=3e-83 Score=643.63 Aligned_cols=395 Identities=18% Similarity=0.214 Sum_probs=358.5
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHH----HHhhHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIE----ENEADV 340 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~----~~~~~~ 340 (713)
.++.+|+.++.+... +.+|.++||++|.+||.+|+.++..+|.++|+++.++|.+|.++|++ |+||++
T Consensus 44 ~nPa~geii~~V~~~--------~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKpL 115 (503)
T KOG2451|consen 44 DNPANGEIIGKVADM--------TVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKPL 115 (503)
T ss_pred cCCCccchhhcccCC--------cHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCch
Confidence 467888888877655 48999999999999999999999999999999999999999999995 556666
Q ss_pred HHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHH-H
Q 005131 341 AAAEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDAL-V 417 (713)
Q Consensus 341 ~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~ 417 (713)
++++ .||.+...+++|||. +++.+|...+.. .+..+..+.++|+||+++|+|| ||..+ .
T Consensus 116 ~eA~----------------gEv~y~a~f~eWyAeEA~RvyGdii~s~--~~~rr~i~ikQPvGV~alItPWNFP~AMIt 177 (503)
T KOG2451|consen 116 GEAK----------------GEVAYSAAFFEWYAEEARRVYGDIIPSL--NPNRRLIVIKQPVGVVALITPWNFPAAMIT 177 (503)
T ss_pred hhcc----------------ceeehhHHHHHHHHHHhhhhhccccCCC--CCCceEEEEeccceeEEEecCcCChHHHHH
Confidence 6665 789999999999998 788888877542 2455778899999999999999 99988 5
Q ss_pred HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC---C-chhHHhhhcCCCccEEEecCCHHHH
Q 005131 418 QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS---R-EEIPDLLKLDDVIDLVIPRGSNRLV 493 (713)
Q Consensus 418 ~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g---~-~~~~~~l~~~~~v~~v~fTGs~~~g 493 (713)
+|+++||++||+||+|||+.||++++.++++..+| |+|+|++|+|++ . ++.+..|..+|.|++|+|||||.+|
T Consensus 178 RK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~A---GiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VG 254 (503)
T KOG2451|consen 178 RKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEA---GIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVG 254 (503)
T ss_pred hHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHc---CCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHH
Confidence 99999999999999999999999999999999999 999999999994 2 5789999999999999999999999
Q ss_pred HHHHHhc---CCCeEEecCccceEEEcCCCCHHHHHHHHHHccC-CCCCccccCceEEEcCCCchhHHHHH---------
Q 005131 494 SQIKEST---KIPVLGHADGICHIYVDKSADMDMAKQIVLDAKV-DYPAACNAMETLLIHQDLVPTGFNEL--------- 560 (713)
Q Consensus 494 ~~i~~~~---~~~v~lElgG~~p~iV~~dADl~~A~~~~~~~~~-~~GQ~C~a~~rv~V~~~i~d~fi~~l--------- 560 (713)
+.+++++ .|+++||||||.|.||++|||||+|++.++...| ++||.|.+.+|+|||++|||+|+++|
T Consensus 255 KiL~~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~v 334 (503)
T KOG2451|consen 255 KILMAQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKV 334 (503)
T ss_pred HHHHHhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheec
Confidence 9999874 4999999999999999999999999888877766 56999999999999999999999977
Q ss_pred -------------------------HHHHHhCCCEE-EcCCcc---c-cccC------C-CCCCCccccccCceEEEEEe
Q 005131 561 -------------------------IDNLRSEGVTL-YGGPRA---S-SLLN------I-PEPNSFHHEYNSMACTIEIV 603 (713)
Q Consensus 561 -------------------------~~~~~~~Ga~l-~gg~~~---~-~~~~------v-~~~~~~~eE~FgPvl~v~~~ 603 (713)
+++|+.+|+++ +||... + .|+. | ++|-+..||+|||+.+|++|
T Consensus 335 GdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kF 414 (503)
T KOG2451|consen 335 GDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKF 414 (503)
T ss_pred cCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeee
Confidence 47899999999 888732 2 3442 4 68899999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhce
Q 005131 604 DDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 683 (713)
Q Consensus 604 ~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~ 683 (713)
+|+||+|+++|+++.||++|+||+|..+..+++++|++|+|.+|.........||||+|+||+|| ++|.+|+++|+
T Consensus 415 dteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GR----EgskyGidey~ 490 (503)
T KOG2451|consen 415 DTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGR----EGSKYGIDEYL 490 (503)
T ss_pred CCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCc----cccccchhhhh
Confidence 99999999999999999999999999999999999999999999887778899999999999999 99999999999
Q ss_pred eEEEEEECC
Q 005131 684 TTRWILKGS 692 (713)
Q Consensus 684 ~~k~v~~~~ 692 (713)
..|++.++.
T Consensus 491 ~ik~icig~ 499 (503)
T KOG2451|consen 491 VIKYICIGT 499 (503)
T ss_pred hhheeeecC
Confidence 999998753
No 5
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=6.2e-81 Score=690.77 Aligned_cols=398 Identities=24% Similarity=0.255 Sum_probs=351.4
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+|+++|+++|++||+.|+++++.+|.++|++++++|++|+++|+.....+.|++.
T Consensus 19 ~nP~tg~~i~~~~~a~--------~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i 90 (472)
T COG1012 19 INPATGEVIATVPAAT--------AEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPI 90 (472)
T ss_pred eCCCCCCEEeeecCCC--------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 3567888888887765 88999999999999999999999999999999999999999999976666655544
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++ ..++..+++.+++++. ..+..+...+.. .+...+++++|+|||++|+|| ||++++ |+++
T Consensus 91 ~ea------------~~ei~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~a 155 (472)
T COG1012 91 SEA------------RGEIARAADFIRYYAEEARRLEGETIPTD---KGSKALVRREPLGVVGAITPWNFPLALAAWKLA 155 (472)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhcCCccCCC---CCcceEEEeecceEEEEECCCCCHHHHHHhhHH
Confidence 331 1568999999999998 444444432211 156788999999999999999 999884 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
|||++||+||+|||+.||+++..+++++.++ |+|+|+||+|+| +.++++.|..||+|++|+||||+++|+.|++.+
T Consensus 156 pALaaGntVV~KPse~tp~sa~~l~~~~~~a---glP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~A 232 (472)
T COG1012 156 PALAAGNTVVLKPSEQTPLSALALAELAAEA---GLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAA 232 (472)
T ss_pred HHHHcCCEEEEECcccCcHHHHHHHHHHHHh---CCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHH
Confidence 9999999999999999999999999999999 899999999997 466899999999999999999999999999875
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH----------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL---------------- 560 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l---------------- 560 (713)
.||++||||||||+||++|||++.| ..+++++|+|+||.|++++|+|||+++||+|++++
T Consensus 233 a~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~~~~l~~Gd~~d~~ 312 (472)
T COG1012 233 AANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPS 312 (472)
T ss_pred hhcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 5999999999999999999999988 66777889999999999999999999999999877
Q ss_pred ------------------HHHHHhCCCEE-EcCCcc-ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHH
Q 005131 561 ------------------IDNLRSEGVTL-YGGPRA-SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHI 613 (713)
Q Consensus 561 ------------------~~~~~~~Ga~l-~gg~~~-~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~ 613 (713)
+++++++|+.+ .||... +.|+. + ++|++++||+||||++|++|+|+||||+++
T Consensus 313 t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lA 392 (472)
T COG1012 313 TDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELA 392 (472)
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCCCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHH
Confidence 35677788887 666533 34542 3 799999999999999999999999999999
Q ss_pred HccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCC--CCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEEC
Q 005131 614 HQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNAST--RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKG 691 (713)
Q Consensus 614 N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~--~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~ 691 (713)
|+++|||+++|||+|..++.++++++++|+||||+.. .....+||||+|.||+|+ ++|.+++++|++.|+|...
T Consensus 393 N~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~----~~g~~~~~~~~~~k~v~~~ 468 (472)
T COG1012 393 NDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGR----EGGKYGLEEFTEVKTVTIK 468 (472)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCc----cchHHHHHHHhcceEEEEe
Confidence 9999999999999999999999999999999999884 345779999999999998 8899999999999999876
Q ss_pred C
Q 005131 692 S 692 (713)
Q Consensus 692 ~ 692 (713)
.
T Consensus 469 ~ 469 (472)
T COG1012 469 L 469 (472)
T ss_pred c
Confidence 4
No 6
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=100.00 E-value=1.1e-80 Score=694.63 Aligned_cols=398 Identities=16% Similarity=0.181 Sum_probs=352.5
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.||+.++++...+ .+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|+.....++|++.
T Consensus 31 ~nP~tg~~v~~~~~~~--------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 102 (482)
T PRK11241 31 TNPANGDKLGSVPKMG--------ADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPL 102 (482)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 3467899999887765 99999999999999999999999999999999999999999999987777777666
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++ ..|+..+++.+++++. ..+..+...+.. ..+...+++|+|+|||++|+|| ||++++ ++++
T Consensus 103 ~~a------------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 168 (482)
T PRK11241 103 AEA------------KGEISYAASFIEWFAEEGKRIYGDTIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAG 168 (482)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEEeeceEEEEECCCcChHHHHHHHHH
Confidence 442 1688999999998886 333233322211 1234567899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
|||++||+||+|||+.+|+++..+++++.++ |+|+|+||+|+| +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 169 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a---glP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~a 245 (482)
T PRK11241 169 PALAAGCTMVLKPASQTPFSALALAELAIRA---GIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQC 245 (482)
T ss_pred HHHHhCCEEEEECCCCChHHHHHHHHHHHHc---CCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999 899999999997 467889999999999999999999999998874
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH----------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL---------------- 560 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l---------------- 560 (713)
.+|+++|||||||+||++|||+|.| ..+++++|+|+||.|++++|||||+++||+|+++|
T Consensus 246 a~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~ 325 (482)
T PRK11241 246 AKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKG 325 (482)
T ss_pred HhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCC
Confidence 5999999999999999999999999 67888889999999999999999999999999987
Q ss_pred ------------------HHHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHH
Q 005131 561 ------------------IDNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIG 611 (713)
Q Consensus 561 ------------------~~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~ 611 (713)
+++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||+
T Consensus 326 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~ 405 (482)
T PRK11241 326 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIA 405 (482)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHH
Confidence 35677889998 787542 44542 3 7899999999999999999999999999
Q ss_pred HHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEEC
Q 005131 612 HIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKG 691 (713)
Q Consensus 612 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~ 691 (713)
++|+++|||++||||+|.++++++++++++|+||||++....+.+||||+|+||+|+ ++|++|+++||+.|+|++.
T Consensus 406 ~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 406 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGR----EGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred HhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCc----ccHHHHHHHhhcceEEEEe
Confidence 999999999999999999999999999999999999886666678999999999999 8899999999999999763
No 7
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=100.00 E-value=1.9e-80 Score=697.53 Aligned_cols=399 Identities=16% Similarity=0.185 Sum_probs=351.6
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++.+...+ .+|+++|+++|++||+.|++++.++|+++|++++++|++++++|+..+.+++|++.
T Consensus 134 ~nP~tg~~i~~v~~a~--------~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~ 205 (604)
T PLN02419 134 INPATQEVVSKVPLTT--------NEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTL 205 (604)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 4567889999887775 99999999999999999999999999999999999999999999987777777766
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++ ..||..+++.+++++. .....+...+.. ..+...+++++|+|||++|+|| ||+.++ ++++
T Consensus 206 ~ea------------~~EV~~~i~~~~~~a~~a~~~~g~~~~~~--~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~ia 271 (604)
T PLN02419 206 KDS------------HGDIFRGLEVVEHACGMATLQMGEYLPNV--SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFP 271 (604)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhhCCccccc--CCCccceEEecCccEEEEECCCccHHHHHHHHHH
Confidence 442 1688899999999887 333333322211 1244567899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
|||++||+||+|||+.+|+++..+++++.++ |+|+|+||+|+|..++++.|..||+||+|+||||+++|+.|++.+
T Consensus 272 pALaAGNtVVlKPSe~tp~ta~~l~~l~~eA---GlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa 348 (604)
T PLN02419 272 VAVTCGNTFILKPSEKDPGASVILAELAMEA---GLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAA 348 (604)
T ss_pred HHHHcCCEEEEeCCCCCcHHHHHHHHHHHHh---CcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHh
Confidence 9999999999999999999999999999999 999999999998656788898899999999999999999999864
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH-----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL----------------- 560 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l----------------- 560 (713)
++|++||||||||+||++|||++.| ..+++++|+|+||.|+|++|||||++ +|+|+++|
T Consensus 349 ~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t 427 (604)
T PLN02419 349 AKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDA 427 (604)
T ss_pred ccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCC
Confidence 5999999999999999999999999 67788889999999999999999999 89999877
Q ss_pred -----------------HHHHHhCCCEE-EcCCc-------cccccC------C-CCCCCccccccCceEEEEEeCCHHH
Q 005131 561 -----------------IDNLRSEGVTL-YGGPR-------ASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 561 -----------------~~~~~~~Ga~l-~gg~~-------~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
+++++++|+++ +||.. .+.|++ + ++|.+++||+||||++|++|+|+||
T Consensus 428 ~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dE 507 (604)
T PLN02419 428 DLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDE 507 (604)
T ss_pred CccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHH
Confidence 35777889998 78753 144552 4 7899999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCC-CCCCCCCccCccceeec--cccCCCcccchHhhceeE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNAST-RFCDGARFGLGAEVGIS--TSRIHARGPVGVEGLLTT 685 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~~pfGG~k~SG~g--~~~~~~~g~~~l~~~~~~ 685 (713)
||+++|+++|||++||||+|..++.++++++++|.||||+.. ...+.+||||+|.||+| + ++|++|+++|+++
T Consensus 508 AI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~----~~G~~gl~~ft~~ 583 (604)
T PLN02419 508 AISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLN----FYGKAGVDFFTQI 583 (604)
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCc----ccHHHHHHHhhCe
Confidence 999999999999999999999999999999999999999874 33478999999999999 6 7899999999999
Q ss_pred EEEEECCC
Q 005131 686 RWILKGSG 693 (713)
Q Consensus 686 k~v~~~~~ 693 (713)
|+|+++..
T Consensus 584 K~v~~~~~ 591 (604)
T PLN02419 584 KLVTQKQK 591 (604)
T ss_pred EEEEEccC
Confidence 99988653
No 8
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=100.00 E-value=1.2e-78 Score=667.66 Aligned_cols=406 Identities=42% Similarity=0.711 Sum_probs=361.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHH
Q 005131 290 VGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANS 369 (713)
Q Consensus 290 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~ 369 (713)
+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|++.+.+++++++..|+.+...+++..+..|++.+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999887666667788899998999999999
Q ss_pred HHHHhcccCccccccccccccCCceeeeeeccceeEEEEecCCchHHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 005131 370 VRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFESRPDALVQIAALAIRSGNGLLLKGGKEAKRSNAILHKII 449 (713)
Q Consensus 370 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~~P~~~~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~ 449 (713)
+++++...+..+...+....+.+...+++++|+|||++|+||+|....++++|||++||+||+||||.||.++.++++++
T Consensus 84 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p~~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~ 163 (417)
T PRK00197 84 LRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVI 163 (417)
T ss_pred HHHHhhcCCCccccccceecCCCceEEEEecCceEEEEEcCCCchHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHH
Confidence 99998743344443322111234467889999999999999966444699999999999999999999999999999998
Q ss_pred HHhccc-cCCCCeEEEecC-C-chhHHhhhcCCCccEEEecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCCCHHHH-
Q 005131 450 TEVIPE-NVGERLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSADMDMA- 525 (713)
Q Consensus 450 ~~al~~-glP~g~v~vv~g-~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dADl~~A- 525 (713)
.++|.+ |+|+|+||+|+| + ++++++|..||+||+|+||||+++|+.|++.+++|+++|||||||+||++|||++.|
T Consensus 164 ~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a~~~~~lELGGk~p~IV~~dAdl~~Aa 243 (417)
T PRK00197 164 QEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADLDKAL 243 (417)
T ss_pred HHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHH
Confidence 776443 699999999995 4 458899999999999999999999999999889999999999999999999999999
Q ss_pred HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccC-C--CCCCCccccccCceEEEEE
Q 005131 526 KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLN-I--PEPNSFHHEYNSMACTIEI 602 (713)
Q Consensus 526 ~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~-v--~~~~~~~eE~FgPvl~v~~ 602 (713)
..+++++++|+| .|++++|+|||+++||+|+++|++.+.+.++.+.||.....|++ + ++|++++||+||||++|++
T Consensus 244 ~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~~~~~PTi~~~~~~i~~eE~FGPVl~v~~ 322 (417)
T PRK00197 244 KIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTEYLDLILAVKV 322 (417)
T ss_pred HHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCeEecCHHHHHhhcccccCCcchhhhhhhCceEEEEE
Confidence 667788888999 99999999999999999999999999999998876643223544 3 7899999999999999999
Q ss_pred eCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhc
Q 005131 603 VDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 682 (713)
Q Consensus 603 ~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~ 682 (713)
|+|+||||+++|+++|||++||||+|.++++++++++++|+||||+++...+..||||+|+||+|.++.+++|++|+++|
T Consensus 323 ~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~ 402 (417)
T PRK00197 323 VDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEEL 402 (417)
T ss_pred eCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhh
Confidence 99999999999999999999999999999999999999999999998766778999999999999444449999999999
Q ss_pred eeEEEEEECCCeee
Q 005131 683 LTTRWILKGSGQVV 696 (713)
Q Consensus 683 ~~~k~v~~~~~~~~ 696 (713)
|++|+|+++.+++|
T Consensus 403 ~~~k~v~~~~~~~~ 416 (417)
T PRK00197 403 TTYKYIVLGDGQIR 416 (417)
T ss_pred cEEEEEEECCCeeC
Confidence 99999999999876
No 9
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=100.00 E-value=3.2e-78 Score=669.24 Aligned_cols=382 Identities=19% Similarity=0.225 Sum_probs=324.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHH
Q 005131 288 NEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLA 367 (713)
Q Consensus 288 t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~ 367 (713)
...|+++++++|++||++|+++|+++|.++|++++++|++|+++|+..+.+|+|++..++ .. .|+..++
T Consensus 8 ~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a----~~-------~Ev~~~~ 76 (484)
T PLN02174 8 GAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELES----SV-------YEVSLLR 76 (484)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH----HH-------HHHHHHH
Confidence 377999999999999999999999999999999999999999999988888888876542 12 2555555
Q ss_pred HHHHHHhc-ccCccc---cccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHH
Q 005131 368 NSVRVLAN-MEDPIG---HILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRS 441 (713)
Q Consensus 368 ~~l~~~a~-~~~~~~---~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~ 441 (713)
+.++++++ ..+..+ ...... ..+...++.|+|+|||++|+|| ||+.++ ++++|||++||+||+|||+.||++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~ 154 (484)
T PLN02174 77 NSIKLALKQLKNWMAPEKAKTSLT--TFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPAS 154 (484)
T ss_pred HHHHHHHHHHHHHhcccccccccc--cCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHH
Confidence 55555554 221111 011111 1233567899999999999999 999885 999999999999999999999999
Q ss_pred HHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcC
Q 005131 442 NAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDK 518 (713)
Q Consensus 442 ~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~ 518 (713)
+.++++++.++ +|+|+||+|+|+.+.+..|.+ |.+|+|+||||+++|+.|++.+ .+|++||||||||+||++
T Consensus 155 ~~~l~~l~~~~----lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~ 229 (484)
T PLN02174 155 SALLAKLLEQY----LDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDS 229 (484)
T ss_pred HHHHHHHHHHh----CCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcC
Confidence 99999999876 677799999976444555555 8999999999999999999874 699999999999999999
Q ss_pred CCCHHHH-HHHHHHcc-CCCCCccccCceEEEcCCCchhHHHHHH---------------------------------HH
Q 005131 519 SADMDMA-KQIVLDAK-VDYPAACNAMETLLIHQDLVPTGFNELI---------------------------------DN 563 (713)
Q Consensus 519 dADl~~A-~~~~~~~~-~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------------------------~~ 563 (713)
|||++.| ..+++++| +|+||.|+|++|+|||+++||+|+++|+ ++
T Consensus 230 dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~ 309 (484)
T PLN02174 230 DTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDE 309 (484)
T ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHH
Confidence 9999999 56677787 5999999999999999999999999873 33
Q ss_pred HHhCCCEE-EcCCcc--ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHH
Q 005131 564 LRSEGVTL-YGGPRA--SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAE 633 (713)
Q Consensus 564 ~~~~Ga~l-~gg~~~--~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~ 633 (713)
+ ++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.
T Consensus 310 a-~~ga~~~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~ 388 (484)
T PLN02174 310 K-EVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKE 388 (484)
T ss_pred H-HcCCEEEECCCcCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHH
Confidence 3 467887 788543 44542 4 78999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCeeeEEEcCCCCC--CCCCCccCccceeeccccCCCcccchHhhceeEEEEEECC
Q 005131 634 IFLRQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGS 692 (713)
Q Consensus 634 ~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 692 (713)
++++++++|.|+||++... .+.+||||+|+||+|+ ++|.+|+++||+.|+|+++.
T Consensus 389 ~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr----~~G~~gl~~ft~~K~v~~~~ 445 (484)
T PLN02174 389 RFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGA----YHGKFSFDAFSHKKAVLYRS 445 (484)
T ss_pred HHHHcCCcceEEECCCcCCCCCCCCCCCCcCccccCc----cchHHHHHHhcceEEEEECC
Confidence 9999999999999988543 3678999999999999 88999999999999999864
No 10
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=100.00 E-value=2.2e-78 Score=675.85 Aligned_cols=397 Identities=16% Similarity=0.185 Sum_probs=348.3
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+|+++|+++|++||+.|+++|.++|+++|++++++|++++++|+....+++|++.
T Consensus 21 ~~P~tg~~i~~~~~~~--------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 92 (472)
T TIGR03374 21 YNPATGEVILEIAEAS--------AEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPL 92 (472)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 4567899999888775 99999999999999999999999999999999999999999999988888888776
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+.. ..|+..+++.+++++. .....+...+.. ..+...++.|+|+|||++|+|| ||+.++ ++++
T Consensus 93 ~~~~-----------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~ 159 (472)
T TIGR03374 93 HSVF-----------NDEIPAIVDVFRFFAGAARCLSGLAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLA 159 (472)
T ss_pred HHHH-----------HHHHHHHHHHHHHHHHHHHHhcCcccCcc--CCCceEEEEEecceEEEEECCCCchHHHHHHHHH
Confidence 4321 1478888888888876 333222211111 1234567899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
|||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 160 ~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~----lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 235 (472)
T TIGR03374 160 PALAAGNCVVLKPSEITPLTALKLAELAKDI----FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHT 235 (472)
T ss_pred HHHhcCCEEEecCCCCCCHHHHHHHHHHHHh----CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999765 77789999998 567899999999999999999999999998865
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH----------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL---------------- 560 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l---------------- 560 (713)
.+|++||||||||+||++|||++.| ..+++++|+|+||.|++++|+|||+++||+|+++|
T Consensus 236 a~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~ 315 (472)
T TIGR03374 236 APSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDES 315 (472)
T ss_pred hhcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 5999999999999999999999999 56777888999999999999999999999999987
Q ss_pred ------------------HHHHHhCC-CEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHHH
Q 005131 561 ------------------IDNLRSEG-VTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAI 610 (713)
Q Consensus 561 ------------------~~~~~~~G-a~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi 610 (713)
+++++++| +++ +||... +.|+. + ++|++++||+||||++|++|+|+||||
T Consensus 316 ~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai 395 (472)
T TIGR03374 316 TELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVV 395 (472)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHH
Confidence 35667788 687 787542 34542 3 789999999999999999999999999
Q ss_pred HHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 611 GHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 611 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+++|+++|||++||||+|..++.++++++++|+||||++....+.+||||+|.||+|+ ++|++|+++||+.|+|++
T Consensus 396 ~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 396 NWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGK----DMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCc----cchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999999987777889999999999998 889999999999999975
No 11
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=100.00 E-value=2.4e-78 Score=679.66 Aligned_cols=399 Identities=20% Similarity=0.221 Sum_probs=352.5
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSR--RLQAMSSEDRKKILLDIADALEANEELIIEENEADVAA 342 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~ 342 (713)
.++.||+.++++...+ .+|+++|+++|++||+ .|++++.++|+++|++++++|++++++|++...+++|+
T Consensus 41 ~~P~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 112 (501)
T PLN02766 41 RDPRTGEVIARIAEGD--------KEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGK 112 (501)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 4567899999987765 9999999999999997 59999999999999999999999999999888888777
Q ss_pred HHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 343 AEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 343 ~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
+..++. ..|+..+++.+++++. ..+..++.... ..+...++.++|+|||++|+|| ||+.++ ++
T Consensus 113 ~~~~a~-----------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 178 (501)
T PLN02766 113 LFALGK-----------AVDIPAAAGLLRYYAGAADKIHGETLKM---SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMK 178 (501)
T ss_pred CHHHHH-----------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEeccceEEEEECCCCChHHHHHHH
Confidence 654321 1478888899998887 33333332221 1234567889999999999999 999985 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
++|||++||+||+|||+.+|.++.++++++.++ |+|+|+||+|+| +.++++.|..||+||+|+||||+++|++|++
T Consensus 179 ~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a---GlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~ 255 (501)
T PLN02766 179 VAPALAAGCTMVVKPAEQTPLSALFYAHLAKLA---GVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQ 255 (501)
T ss_pred HHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhc---CCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999 899999999998 4678999999999999999999999999998
Q ss_pred hc----CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH-------------
Q 005131 499 ST----KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL------------- 560 (713)
Q Consensus 499 ~~----~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l------------- 560 (713)
.+ ++|+++|||||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|
T Consensus 256 ~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~ 335 (501)
T PLN02766 256 AAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPF 335 (501)
T ss_pred HhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 54 4899999999999999999999999 66888889999999999999999999999999977
Q ss_pred ---------------------HHHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHH
Q 005131 561 ---------------------IDNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 561 ---------------------~~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
+++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||
T Consensus 336 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~de 415 (501)
T PLN02766 336 DPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEE 415 (501)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHH
Confidence 35677789998 787642 34542 3 7899999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
||+++|+++|||++||||+|.+++.++++++++|.|+||+.....+.+||||+|.||+|+ ++|++|+++||++|+|
T Consensus 416 ai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~ft~~k~v 491 (501)
T PLN02766 416 AIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGR----DQGMDALDKYLQVKSV 491 (501)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCc----cchHHHHHHHhceEEE
Confidence 999999999999999999999999999999999999999887677889999999999999 8999999999999999
Q ss_pred EECC
Q 005131 689 LKGS 692 (713)
Q Consensus 689 ~~~~ 692 (713)
++..
T Consensus 492 ~~~~ 495 (501)
T PLN02766 492 VTPL 495 (501)
T ss_pred EEec
Confidence 8753
No 12
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=100.00 E-value=9.5e-78 Score=658.41 Aligned_cols=398 Identities=45% Similarity=0.753 Sum_probs=352.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHH
Q 005131 294 EMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVL 373 (713)
Q Consensus 294 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~ 373 (713)
.++++|++||+.|+++|.++|.++|+++++.|++|+++|+..+.+|+++++..|..+...+++..+..|++.+++.+++|
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999887776677888889989999999999999
Q ss_pred hcccCccccccccccccCCceeeeeeccceeEEEEecCCchHHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhc
Q 005131 374 ANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFESRPDALVQIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVI 453 (713)
Q Consensus 374 a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~~P~~~~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al 453 (713)
+...+..+...+....+.+...+++++|+|||++|+||+|....++++|||++||+||+|||+.||+++..++++++++|
T Consensus 82 a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l 161 (406)
T cd07079 82 AALPDPVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEAL 161 (406)
T ss_pred HhcCCCCcccccceeccCccceeEEecceEEEEEecCCCcchHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHH
Confidence 87444434332221112344567899999999999999775556999999999999999999999999999999998764
Q ss_pred -cccCCCCeEEEecC-C-chhHHhhhcCCCccEEEecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCCCHHHH-HHHH
Q 005131 454 -PENVGERLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSADMDMA-KQIV 529 (713)
Q Consensus 454 -~~glP~g~v~vv~g-~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dADl~~A-~~~~ 529 (713)
..|+|+|++|+|+| + ++++++|.+||+||+|+||||+++|+.|++++.+|+++|||||||+||++|||+|.| ..++
T Consensus 162 ~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~~i~ 241 (406)
T cd07079 162 EEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIVV 241 (406)
T ss_pred HHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHHHHHH
Confidence 33799999999997 4 367999999999999999999999999998889999999999999999999999999 5677
Q ss_pred HHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCcccccc-C-C-CCCCCccccccCceEEEEEeCCH
Q 005131 530 LDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLL-N-I-PEPNSFHHEYNSMACTIEIVDDV 606 (713)
Q Consensus 530 ~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~-~-v-~~~~~~~eE~FgPvl~v~~~~~~ 606 (713)
+++|+|+| .|++++|||||+++||+|+++|++.+.+.|+++.||.....|+ + + ++|++++||+||||++|++|+|+
T Consensus 242 ~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~ga~~~~g~~~~~~~~ptv~~d~~i~~eE~FGPVl~v~~~~~~ 320 (406)
T cd07079 242 NAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREAGVELRGDEETLAILPGAKPATEEDWGTEYLDLILAVKVVDSL 320 (406)
T ss_pred HcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHCCCEEecCHHHHHhcccccCCCcchhhhhhhCceeEEEEeCCH
Confidence 78888999 9999999999999999999999999999999997765422344 3 4 79999999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEE
Q 005131 607 HAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 686 (713)
Q Consensus 607 ~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k 686 (713)
||||+++|+++|||++||||+|.++++++++++++|.|+||+++...+.+||||+|+||+|.++.+++|++|+++||+.|
T Consensus 321 deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k 400 (406)
T cd07079 321 DEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYK 400 (406)
T ss_pred HHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEE
Confidence 99999999999999999999999999999999999999999987666778999999999933223389999999999999
Q ss_pred EEEECC
Q 005131 687 WILKGS 692 (713)
Q Consensus 687 ~v~~~~ 692 (713)
+|++++
T Consensus 401 ~i~~~~ 406 (406)
T cd07079 401 YIVRGD 406 (406)
T ss_pred EEEeCC
Confidence 998763
No 13
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=100.00 E-value=6.7e-78 Score=670.89 Aligned_cols=397 Identities=18% Similarity=0.219 Sum_probs=347.4
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
+++.+|+.++++...+ .+|+++|+++|++||+.|+++++++|+++|++++++|++|+++|+..+..++|++.
T Consensus 12 ~nP~t~~~i~~~~~~~--------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 83 (462)
T PRK13968 12 VNPATGEQLSVLPWAG--------ADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPI 83 (462)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH
Confidence 3577899999887775 99999999999999999999999999999999999999999999987777777776
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++ ..|+..+++.+++++. ..+..+..... ..+...+++++|+|||++|+|| ||++++ ++++
T Consensus 84 ~~a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~ 148 (462)
T PRK13968 84 NQA------------RAEVAKSANLCDWYAEHGPAMLKAEPTL---VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAV 148 (462)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhhCCcccc---CCCceEEEEEeccceEEEEcCCchHHHHHHHHHH
Confidence 442 1578888888888876 32222211111 1234567899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
|||++||+||+|||+.+|+++.++++++.++ |+|+|++|+|+|..+....|..||++|+|+||||+++|++|++.+
T Consensus 149 ~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~a---GlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa 225 (462)
T PRK13968 149 PILLAGNGYLLKHAPNVMGCAQLIAQVFKDA---GIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAG 225 (462)
T ss_pred HHHHcCCEEEEECCCcChHHHHHHHHHHHHc---CcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 999999999997433334467789999999999999999999875
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------------- 561 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------- 561 (713)
++|+++|||||||+||++|||++.| ..+++++++|+||.|++++|+|||+++||+|+++|+
T Consensus 226 ~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 305 (462)
T PRK13968 226 AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEEN 305 (462)
T ss_pred hcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCC
Confidence 6999999999999999999999999 567888889999999999999999999999999873
Q ss_pred ------------------HHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005131 562 ------------------DNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGH 612 (713)
Q Consensus 562 ------------------~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~ 612 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||++
T Consensus 306 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~ 385 (462)
T PRK13968 306 ALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALEL 385 (462)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHH
Confidence 4566789998 787542 34542 3 67899999999999999999999999999
Q ss_pred HHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEEC
Q 005131 613 IHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKG 691 (713)
Q Consensus 613 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~ 691 (713)
+|+++|||+++|||+|.+++.++++++++|.|+||+++...+.+||||+|.||+|+ ++|++|+++||+.|+|++.
T Consensus 386 ~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 386 ANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGR----ELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred HhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCc----CchHHHHHHhcceeEEEEe
Confidence 99999999999999999999999999999999999887667789999999999998 8899999999999999874
No 14
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=7.9e-78 Score=669.45 Aligned_cols=400 Identities=19% Similarity=0.191 Sum_probs=347.8
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.||+.++++...+ .+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++...+++|++.
T Consensus 6 ~~P~t~~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 77 (457)
T PRK09406 6 INPATGETVKTFTALT--------DDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTL 77 (457)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCH
Confidence 3567899999877765 99999999999999999999999999999999999999999999988777777776
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++ ..|+..+++.+++++. ..+..+..........+...+++++|+|||++|+|| ||++++ ++++
T Consensus 78 ~~a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~ 145 (457)
T PRK09406 78 ASA------------KAEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAA 145 (457)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHH
Confidence 442 1578888888888876 322222111100001233567899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
|||++||+||+|||+.+|.++.++++++.++ |+|+|+||+|+++.+.+..|..||++++|+||||+++|+.|++.+
T Consensus 146 ~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~a---GlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~ 222 (457)
T PRK09406 146 PALMAGNVGLLKHASNVPQTALYLADLFRRA---GFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAG 222 (457)
T ss_pred HHHHcCCEEEEECCCcCcHHHHHHHHHHHHh---CCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 899999999985444566677899999999999999999998864
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH-----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL----------------- 560 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l----------------- 560 (713)
.+|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|+|||+++||+|+++|
T Consensus 223 ~~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~ 302 (457)
T PRK09406 223 DEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDT 302 (457)
T ss_pred hcCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 5999999999999999999999999 55777888899999999999999999999999987
Q ss_pred -----------------HHHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005131 561 -----------------IDNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGH 612 (713)
Q Consensus 561 -----------------~~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~ 612 (713)
+++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|++|||++
T Consensus 303 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 382 (457)
T PRK09406 303 DVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEI 382 (457)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHH
Confidence 24566789998 788642 44542 3 67899999999999999999999999999
Q ss_pred HHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEEC
Q 005131 613 IHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKG 691 (713)
Q Consensus 613 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~ 691 (713)
+|+++|||++||||+|.+++.++++++++|+||||+++...+.+||||+|.||+|+ ++|++|+++||+.|+|+++
T Consensus 383 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~v~~~ 457 (457)
T PRK09406 383 ANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGR----ELSAHGIREFCNIKTVWIG 457 (457)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCc----cchHHHHHHhhceEEEEeC
Confidence 99999999999999999999999999999999999987777789999999999999 8899999999999999763
No 15
>PLN02278 succinic semialdehyde dehydrogenase
Probab=100.00 E-value=1.2e-77 Score=674.11 Aligned_cols=399 Identities=17% Similarity=0.201 Sum_probs=352.5
Q ss_pred HHHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 264 ILKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 264 l~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
+.++.+|+.++++...+ .+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|+....+++|++
T Consensus 44 v~~P~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 115 (498)
T PLN02278 44 VYNPATGEVIANVPCMG--------RAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKP 115 (498)
T ss_pred EECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 35778899888877664 8999999999999999999999999999999999999999999998888888777
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIA 420 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~ 420 (713)
..+. ..|+..+++.+++++. .....+...+.. ..+...+++|+|+|||++|+|| ||++++ +++
T Consensus 116 ~~~a------------~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i 181 (498)
T PLN02278 116 LKEA------------IGEVAYGASFLEYFAEEAKRVYGDIIPSP--FPDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 181 (498)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEeecccEEEEECCCccHHHHHHHHH
Confidence 6442 1588888999998887 333333222211 1234567789999999999999 999985 999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
+|||++||+||+|||+.+|.++..+.+++.++ |+|+|+||+|+|+ +++++.|..||+||+|+||||+++|+.|++.
T Consensus 182 ~~ALaaGN~VVlKps~~tp~~~~~l~~~l~ea---glP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~ 258 (498)
T PLN02278 182 GPALAAGCTVVVKPSELTPLTALAAAELALQA---GIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAG 258 (498)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHc---CCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999 8999999999974 5678889999999999999999999999986
Q ss_pred c---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH---------------
Q 005131 500 T---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL--------------- 560 (713)
Q Consensus 500 ~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l--------------- 560 (713)
+ .+|+++|||||||+||++|||++.| ..+++++|+|+||.|+|++|||||+++||+|+++|
T Consensus 259 aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~ 338 (498)
T PLN02278 259 AAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEE 338 (498)
T ss_pred HhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 5 4999999999999999999999999 67788889999999999999999999999999987
Q ss_pred -------------------HHHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHHH
Q 005131 561 -------------------IDNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAI 610 (713)
Q Consensus 561 -------------------~~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi 610 (713)
+++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai 418 (498)
T PLN02278 339 GVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAI 418 (498)
T ss_pred CCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHH
Confidence 25667789998 787542 34542 3 789999999999999999999999999
Q ss_pred HHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 611 GHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 611 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+++|+++|||++||||+|.++++++++++++|.||||+.....+.+||||+|+||+|+ ++|++|+++||+.|+|++
T Consensus 419 ~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~ft~~k~i~~ 494 (498)
T PLN02278 419 AIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGR----EGSKYGIDEYLEIKYVCL 494 (498)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCc----cchHHHHHHhheeEEEEE
Confidence 9999999999999999999999999999999999999876556789999999999999 889999999999999987
Q ss_pred C
Q 005131 691 G 691 (713)
Q Consensus 691 ~ 691 (713)
+
T Consensus 495 ~ 495 (498)
T PLN02278 495 G 495 (498)
T ss_pred e
Confidence 4
No 16
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=100.00 E-value=8.3e-78 Score=674.07 Aligned_cols=403 Identities=19% Similarity=0.239 Sum_probs=349.3
Q ss_pred HHHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 264 ILKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 264 l~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
+.++.|++.++++...+ .+|+++|+++|++||+.|++++.++|+++|++++++|++++++|++....++|++
T Consensus 38 ~~nP~t~~~i~~~~~a~--------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~ 109 (508)
T PLN02315 38 SVNPANNQPIAEVVEAS--------LEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKI 109 (508)
T ss_pred eECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCC
Confidence 34577889889887664 9999999999999999999999999999999999999999999998777777777
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIA 420 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~ 420 (713)
..++ ..|+..+++.+++++. ..+..+...+.. ..+...+..++|+|||++|+|| ||+.++ +++
T Consensus 110 ~~~a------------~~ev~~~i~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 175 (508)
T PLN02315 110 LAEG------------IGEVQEIIDMCDFAVGLSRQLNGSIIPSE--RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNA 175 (508)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 6442 1688889999998886 333333222211 1234456789999999999999 999885 999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccc-cCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPE-NVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~-glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
+|||++||+||+|||+.+|+++..+++++.++|.+ |+|+|++|+|+|+.++++.|..||++|+|+||||+++|+.|++.
T Consensus 176 ~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~ 255 (508)
T PLN02315 176 CIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQT 255 (508)
T ss_pred hHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999866666555443 69999999999876788999999999999999999999999986
Q ss_pred c---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH---------------
Q 005131 500 T---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL--------------- 560 (713)
Q Consensus 500 ~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l--------------- 560 (713)
+ .+|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|+|||+++||+|+++|
T Consensus 256 aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~ 335 (508)
T PLN02315 256 VNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEK 335 (508)
T ss_pred HHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 4 5999999999999999999999999 66778888899999999999999999999999987
Q ss_pred -------------------HHHHHhCCCEE-EcCCc---cccccC-----C-CCCCCccccccCceEEEEEeCCHHHHHH
Q 005131 561 -------------------IDNLRSEGVTL-YGGPR---ASSLLN-----I-PEPNSFHHEYNSMACTIEIVDDVHAAIG 611 (713)
Q Consensus 561 -------------------~~~~~~~Ga~l-~gg~~---~~~~~~-----v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~ 611 (713)
++.++++|+++ +||.. .+.|+. | ++|++++||+||||++|++|+|+||||+
T Consensus 336 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~ 415 (508)
T PLN02315 336 GTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIE 415 (508)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEEecCCCChHHhCCCcCCEEEEEEeCCHHHHHH
Confidence 35677889998 78764 234542 3 7899999999999999999999999999
Q ss_pred HHHccCCCceeEEEcCCHHHHHHHHh--ccCeeeEEEcCCCC-CCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 612 HIHQHGSGHTDCIITNDSEAAEIFLR--QVDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 612 ~~N~~~~gL~a~v~t~d~~~a~~~~~--~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
++|+++|||++||||+|.++++++++ ++++|.||||+++. ..+.+||||+|.||+|+ ++|.+|+++||+.|+|
T Consensus 416 ~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~ft~~k~v 491 (508)
T PLN02315 416 INNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGR----EAGSDSWKQYMRRSTC 491 (508)
T ss_pred HHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCc----cchHHHHHHHhhEEEE
Confidence 99999999999999999999999984 79999999998644 45789999999999999 8899999999999999
Q ss_pred EECC
Q 005131 689 LKGS 692 (713)
Q Consensus 689 ~~~~ 692 (713)
+++.
T Consensus 492 ~~~~ 495 (508)
T PLN02315 492 TINY 495 (508)
T ss_pred EEec
Confidence 8764
No 17
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=100.00 E-value=1.2e-77 Score=676.30 Aligned_cols=397 Identities=18% Similarity=0.200 Sum_probs=348.7
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSR--RLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
++.+|+.++++...+ .+|+++|+++|++||+ .|++++.++|.++|++++++|++++++|++...++.|++
T Consensus 79 ~P~tg~~i~~v~~~~--------~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~ 150 (538)
T PLN02466 79 DPRTGEVIAHVAEGD--------AEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKP 150 (538)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 466889999887664 9999999999999997 499999999999999999999999999998776666666
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIA 420 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~ 420 (713)
..++. ..|+..+++.+++|+. ..+..+...+. ..+...++.++|+|||++|+|| ||+.++ +++
T Consensus 151 ~~~a~-----------~~Ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i 216 (538)
T PLN02466 151 YEQSA-----------KAELPMFARLFRYYAGWADKIHGLTVPA---DGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 216 (538)
T ss_pred HHHHH-----------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceEEEEECCCchHHHHHHHHH
Confidence 53310 1478888889998876 33333332221 1233567899999999999999 999985 999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
+|||++||+||+|||+.+|.++.++++++.++ |+|+|+||+|+| ++++++.|..||+||+|+||||+++|+.|++.
T Consensus 217 ~pALaaGN~VVlKPs~~tp~~~~~l~~ll~ea---GlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~ 293 (538)
T PLN02466 217 GPALACGNTIVLKTAEQTPLSALYAAKLLHEA---GLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLEL 293 (538)
T ss_pred hHHHHcCCEEEeECCCCCcHHHHHHHHHHHhc---CCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999998 46788999999999999999999999999875
Q ss_pred c----CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-------------
Q 005131 500 T----KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------- 561 (713)
Q Consensus 500 ~----~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------- 561 (713)
+ ++|+++|||||||+||++|||++.| ..+++++|+|+||.|++++|+|||+++||+|+++|+
T Consensus 294 aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~ 373 (538)
T PLN02466 294 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFK 373 (538)
T ss_pred HHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 4 4899999999999999999999999 567788889999999999999999999999999872
Q ss_pred ---------------------HHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHH
Q 005131 562 ---------------------DNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAA 609 (713)
Q Consensus 562 ---------------------~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eA 609 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|||
T Consensus 374 ~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deA 453 (538)
T PLN02466 374 KGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEV 453 (538)
T ss_pred CCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHH
Confidence 4567789998 787642 33442 3 78999999999999999999999999
Q ss_pred HHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 610 IGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 610 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
|+++|+++|||++||||+|.+++.++++++++|+||||+++...+.+||||+|.||+|+ ++|++|+++||++|+|+
T Consensus 454 i~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~----~~G~~gl~~ft~~k~v~ 529 (538)
T PLN02466 454 IRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGR----EKGIYSLNNYLQVKAVV 529 (538)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCc----ccHHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999887777889999999999999 88999999999999998
Q ss_pred EC
Q 005131 690 KG 691 (713)
Q Consensus 690 ~~ 691 (713)
+.
T Consensus 530 ~~ 531 (538)
T PLN02466 530 TP 531 (538)
T ss_pred Ee
Confidence 74
No 18
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=100.00 E-value=1.9e-77 Score=671.64 Aligned_cols=401 Identities=16% Similarity=0.164 Sum_probs=349.3
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRR-LQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
.++.||+.++++...+ .+|+++++++|++||+. |++++.++|.++|++++++|++++++|++...+++|++
T Consensus 20 ~~P~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 91 (477)
T cd07113 20 TNPATEQVIASVASAT--------EADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKS 91 (477)
T ss_pred eCCCCCCEEEEEcCCC--------HHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCC
Confidence 3567889999887664 89999999999999985 99999999999999999999999999998877777777
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcccccccccc---ccCCceeeeeeccceeEEEEecC-CchHHH-
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQ---LADGLFLEKTSCPLGVLLIVFES-RPDALV- 417 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~- 417 (713)
..++. ..|+..+++.+++++. .....+....... ...+...+++++|+|||++|+|| ||+.++
T Consensus 92 ~~~a~-----------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 160 (477)
T cd07113 92 IHLSR-----------AFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAV 160 (477)
T ss_pred HHHHH-----------HHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHH
Confidence 64311 0378888888888876 2222222211110 01234567899999999999999 999985
Q ss_pred HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHH
Q 005131 418 QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIK 497 (713)
Q Consensus 418 ~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 497 (713)
++++|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+|+..+++.|..||+||+|+||||+++|+.|+
T Consensus 161 ~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~a---glP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 237 (477)
T cd07113 161 WKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEA---GIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIG 237 (477)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHc---CcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999 899999999998534888999999999999999999999999
Q ss_pred Hhc---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH------------
Q 005131 498 EST---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------ 561 (713)
Q Consensus 498 ~~~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------ 561 (713)
+.+ ++|+++|||||||+||++|||++.| ..+++++|+|+||.|++++|+|||+++||+|+++|+
T Consensus 238 ~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 317 (477)
T cd07113 238 RQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPM 317 (477)
T ss_pred HHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 865 5999999999999999999999999 667788889999999999999999999999999873
Q ss_pred ----------------------HHHHhCCCEE-EcCCcc---cccc-C-----C-CCCCCccccccCceEEEEEeCCHHH
Q 005131 562 ----------------------DNLRSEGVTL-YGGPRA---SSLL-N-----I-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 562 ----------------------~~~~~~Ga~l-~gg~~~---~~~~-~-----v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
++++++|+++ +||... +.|+ + + ++|++++||+||||++|++|+|+||
T Consensus 318 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~de 397 (477)
T cd07113 318 DESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEE 397 (477)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHH
Confidence 4567789998 787642 3444 2 3 6899999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
||+++|+++|||++||||+|.+++.++++++++|.|+||+++...+.+||||+|+||+|+ ++|++|+++||+.|+|
T Consensus 398 ai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~v 473 (477)
T cd07113 398 LIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGR----EFGSAFIDDYTELKSV 473 (477)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCc----cchHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999877667789999999999999 8899999999999999
Q ss_pred EEC
Q 005131 689 LKG 691 (713)
Q Consensus 689 ~~~ 691 (713)
+++
T Consensus 474 ~~~ 476 (477)
T cd07113 474 MIR 476 (477)
T ss_pred EEe
Confidence 863
No 19
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=100.00 E-value=2.8e-77 Score=668.57 Aligned_cols=401 Identities=17% Similarity=0.193 Sum_probs=349.6
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSR--RLQAMSSEDRKKILLDIADALEANEELIIEENEADVAA 342 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~ 342 (713)
.++.+|+.++++...+ .+|+++|+++|++||+ .|+++|.++|+++|++++++|++++++|++...++.|+
T Consensus 26 ~nP~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 97 (486)
T cd07140 26 INPTDGSVICKVSLAT--------VEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGA 97 (486)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Confidence 4567899999887775 9999999999999997 59999999999999999999999999999887777777
Q ss_pred HHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcccccccccc-ccCCceeeeeeccceeEEEEecC-CchHHH-H
Q 005131 343 AEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQ-LADGLFLEKTSCPLGVLLIVFES-RPDALV-Q 418 (713)
Q Consensus 343 ~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~ 418 (713)
+..+.+ ..|+...++.+++++. ..+..+...+... .+.+...+++++|+|||++|+|| ||++++ +
T Consensus 98 ~~~~a~-----------~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~ 166 (486)
T cd07140 98 VYTLAL-----------KTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAW 166 (486)
T ss_pred cHHHHH-----------HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHH
Confidence 654311 1478888888888876 3332222222110 01223467899999999999999 999884 9
Q ss_pred HHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHH
Q 005131 419 IAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIK 497 (713)
Q Consensus 419 ~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 497 (713)
+++|||++||+||+|||+.+|.++..+++++.++ |+|+|++|+|+| +.++++.|..||+|++|+||||+++|+.|+
T Consensus 167 ~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a---glP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 243 (486)
T cd07140 167 KMAACLAAGNTVVLKPAQVTPLTALKFAELTVKA---GFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIM 243 (486)
T ss_pred HHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHc---CcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999 899999999997 467889999999999999999999999998
Q ss_pred Hhc----CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH------------
Q 005131 498 EST----KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL------------ 560 (713)
Q Consensus 498 ~~~----~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l------------ 560 (713)
+.+ .+|+++|||||||+||++|||++.| ..+++++|+|+||.|++++|+|||+++||+|+++|
T Consensus 244 ~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p 323 (486)
T cd07140 244 KSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDP 323 (486)
T ss_pred HHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCC
Confidence 864 3899999999999999999999999 56777788899999999999999999999999987
Q ss_pred ----------------------HHHHHhCCCEE-EcCCc---cccccC------C-CCCCCccccccCceEEEEEeC--C
Q 005131 561 ----------------------IDNLRSEGVTL-YGGPR---ASSLLN------I-PEPNSFHHEYNSMACTIEIVD--D 605 (713)
Q Consensus 561 ----------------------~~~~~~~Ga~l-~gg~~---~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~--~ 605 (713)
+++++++|+++ +||.. .+.|+. + ++|++++||+||||++|++|+ |
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~ 403 (486)
T cd07140 324 LDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGD 403 (486)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCC
Confidence 35677899999 88754 234542 3 789999999999999999998 6
Q ss_pred HHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeE
Q 005131 606 VHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 685 (713)
Q Consensus 606 ~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~ 685 (713)
++|||+++|+++|||++||||+|..+++++++++++|.||||+++...+.+||||+|+||+|+ ++|++|+++||+.
T Consensus 404 ~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~ft~~ 479 (486)
T cd07140 404 VDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGK----DLGEEALNEYLKT 479 (486)
T ss_pred HHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCC----cchHHHHHHhhcE
Confidence 999999999999999999999999999999999999999999987667789999999999999 8899999999999
Q ss_pred EEEEEC
Q 005131 686 RWILKG 691 (713)
Q Consensus 686 k~v~~~ 691 (713)
|+|+++
T Consensus 480 k~v~~~ 485 (486)
T cd07140 480 KTVTIE 485 (486)
T ss_pred EEEEEe
Confidence 999864
No 20
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=100.00 E-value=4.3e-77 Score=668.09 Aligned_cols=397 Identities=20% Similarity=0.207 Sum_probs=350.0
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
+++.+|+.++++...+ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|+..+.++.|++.
T Consensus 21 ~~P~t~~~~~~~~~~~--------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 92 (480)
T cd07559 21 YNPVNGKVLCEIPRST--------AEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPI 92 (480)
T ss_pred eCCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 4567888888877664 99999999999999999999999999999999999999999999987777777765
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+.+ ..|+..+++.++++++ .....+..... ..+...++.++|+|||++|+|| ||+.++ ++++
T Consensus 93 ~~a~-----------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~ 158 (480)
T cd07559 93 RETL-----------AADIPLAIDHFRYFAGVIRAQEGSLSEI---DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLA 158 (480)
T ss_pred HHHH-----------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEEeccceEEEECCCchHHHHHHHHHH
Confidence 4421 1478888999998887 33322322211 1345677899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
|||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.++++.|..||+||+|+||||+.+|++|++.+
T Consensus 159 ~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~----lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~a 234 (480)
T cd07559 159 PALAAGNTVVLKPASQTPLSILVLMELIGDL----LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYA 234 (480)
T ss_pred HHHHcCCEEEEECchhhhHHHHHHHHHHHHh----CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999887 67779999998 467899999999999999999999999999875
Q ss_pred ---CCCeEEecCccceEEEcCCC-----CHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------
Q 005131 501 ---KIPVLGHADGICHIYVDKSA-----DMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dA-----Dl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------- 561 (713)
++|+++|||||||+||++|| |++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 235 a~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~ 314 (480)
T cd07559 235 AENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGN 314 (480)
T ss_pred hccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence 59999999999999999999 99998 678888999999999999999999999999999872
Q ss_pred ------------------------HHHHhCCCEE-EcCCcc-------ccccC------C-CCCCCccccccCceEEEEE
Q 005131 562 ------------------------DNLRSEGVTL-YGGPRA-------SSLLN------I-PEPNSFHHEYNSMACTIEI 602 (713)
Q Consensus 562 ------------------------~~~~~~Ga~l-~gg~~~-------~~~~~------v-~~~~~~~eE~FgPvl~v~~ 602 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++
T Consensus 315 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~ 394 (480)
T cd07559 315 PLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVIT 394 (480)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEe
Confidence 4567789998 777542 33442 2 6889999999999999999
Q ss_pred eCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhc
Q 005131 603 VDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 682 (713)
Q Consensus 603 ~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~ 682 (713)
|+|+||||+++|+++|||++||||+|.+++.++++++++|+||||+++...+.+||||+|+||+|+ ++|++|+++|
T Consensus 395 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~~ 470 (480)
T cd07559 395 FKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGR----ETHKMMLDHY 470 (480)
T ss_pred eCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCc----cChHHHHHHh
Confidence 999999999999999999999999999999999999999999999887777889999999999999 8899999999
Q ss_pred eeEEEEEEC
Q 005131 683 LTTRWILKG 691 (713)
Q Consensus 683 ~~~k~v~~~ 691 (713)
|++|+|+++
T Consensus 471 ~~~k~v~~~ 479 (480)
T cd07559 471 QQTKNILVS 479 (480)
T ss_pred hceEEEEEe
Confidence 999999874
No 21
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=100.00 E-value=6e-77 Score=667.96 Aligned_cols=396 Identities=19% Similarity=0.193 Sum_probs=346.4
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.||+.++++...+ .+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|+..+..+.|++.
T Consensus 21 ~nP~tg~~i~~~~~~~--------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 92 (479)
T cd07116 21 ITPVTGKVFCEVPRST--------AEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPV 92 (479)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4577899999877765 89999999999999999999999999999999999999999999987777777665
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+.+ ..|+..+++.++++++ .....+...+. ..+...+++++|+|||++|+|| ||++++ ++++
T Consensus 93 ~~a~-----------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 158 (479)
T cd07116 93 RETL-----------AADIPLAIDHFRYFAGCIRAQEGSISEI---DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLA 158 (479)
T ss_pred HHHH-----------HHHHHHHHHHHHHHHHhHHHcCCeeecC---CCCceEEEEEeccceEEEECCCchHHHHHHHHHH
Confidence 4321 1478899999999987 33222222211 2344567899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
|||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 159 ~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a----lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 234 (479)
T cd07116 159 PALAAGNCVVLKPAEQTPASILVLMELIGDL----LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYA 234 (479)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHHH----CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999987 67779999998 567889999999999999999999999999865
Q ss_pred ---CCCeEEecCccceEEEcCC------CCHHHHHH-HHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------
Q 005131 501 ---KIPVLGHADGICHIYVDKS------ADMDMAKQ-IVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~d------ADl~~A~~-~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------- 561 (713)
.+|+++|||||||+||++| ||++.|++ +++ +++|+||.|++++|||||+++||+|+++|+
T Consensus 235 a~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~-~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G 313 (479)
T cd07116 235 SENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVM-FALNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQG 313 (479)
T ss_pred HcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHH-HHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence 5899999999999999998 79999955 555 567999999999999999999999999872
Q ss_pred -------------------------HHHHhCCCEE-EcCCcc-------ccccC------CCCCCCccccccCceEEEEE
Q 005131 562 -------------------------DNLRSEGVTL-YGGPRA-------SSLLN------IPEPNSFHHEYNSMACTIEI 602 (713)
Q Consensus 562 -------------------------~~~~~~Ga~l-~gg~~~-------~~~~~------v~~~~~~~eE~FgPvl~v~~ 602 (713)
++++++|+++ +||... +.|+. +++|++++||+||||++|++
T Consensus 314 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~eE~FGPVl~v~~ 393 (479)
T cd07116 314 NPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTT 393 (479)
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCCCChhhhcCCcCceEEEEE
Confidence 4567789998 777542 33442 26899999999999999999
Q ss_pred eCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhc
Q 005131 603 VDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 682 (713)
Q Consensus 603 ~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~ 682 (713)
|+|+||||+++|+++|||+++|||+|.+++.++++++++|.||||+++...+.+||||+|+||+|+ ++|++|+++|
T Consensus 394 ~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~ 469 (479)
T cd07116 394 FKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGR----ENHKMMLDHY 469 (479)
T ss_pred eCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCc----cChHHHHHHh
Confidence 999999999999999999999999999999999999999999999887777889999999999999 8999999999
Q ss_pred eeEEEEEEC
Q 005131 683 LTTRWILKG 691 (713)
Q Consensus 683 ~~~k~v~~~ 691 (713)
|++|+|+++
T Consensus 470 ~~~k~~~~~ 478 (479)
T cd07116 470 QQTKNLLVS 478 (479)
T ss_pred hceEEEEEe
Confidence 999999874
No 22
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=100.00 E-value=5.7e-77 Score=665.65 Aligned_cols=397 Identities=19% Similarity=0.214 Sum_probs=349.1
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++.+...+ .+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+....+++|++.
T Consensus 21 ~nP~t~~~i~~~~~~~--------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 92 (475)
T cd07117 21 YNPANGETLSEITDAT--------DADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPI 92 (475)
T ss_pred ECCCCCCEEEEEcCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCH
Confidence 4567889989877765 99999999999999999999999999999999999999999999987777777765
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++. ..|+..+++.+++|+. .....++.... ..+...+.+++|+|||++|+|| ||++++ ++++
T Consensus 93 ~~a~-----------~~ev~~~i~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~ 158 (475)
T cd07117 93 RETR-----------AVDIPLAADHFRYFAGVIRAEEGSANMI---DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLA 158 (475)
T ss_pred HHHH-----------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceeEEEEeecceEEEECCCccHHHHHHHHHH
Confidence 4421 1488899999999986 33333322211 1233567899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
|||++||+||+|||+.+|.++..++++|.++ +|+|++|+|+| +.++++.|..||++|+|+||||+++|+.|++.+
T Consensus 159 ~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~----lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 234 (475)
T cd07117 159 PALAAGNTVVIKPSSTTSLSLLELAKIIQDV----LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAA 234 (475)
T ss_pred HHHHcCCEEEEECCccCcHHHHHHHHHHHHh----CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999876 77779999997 467888899999999999999999999999864
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
.+|+++|||||||+||++|||++.| ..+++++++|+||.|++++|||||++++|+|+++|+
T Consensus 235 a~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 314 (475)
T cd07117 235 AKKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPD 314 (475)
T ss_pred hccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 5999999999999999999999999 668888899999999999999999999999999872
Q ss_pred -------------------HHHHhCCCEE-EcCCcc-------ccccC------C-CCCCCccccccCceEEEEEeCCHH
Q 005131 562 -------------------DNLRSEGVTL-YGGPRA-------SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 562 -------------------~~~~~~Ga~l-~gg~~~-------~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|
T Consensus 315 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 394 (475)
T cd07117 315 TQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTED 394 (475)
T ss_pred CcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHH
Confidence 4566789998 777541 33442 3 789999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||+|+||+|+ ++|++|+++||+.|+
T Consensus 395 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~ 470 (475)
T cd07117 395 EVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGR----ETHKSMLDAYTQMKN 470 (475)
T ss_pred HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCC----CchHHHHHHHhCeEE
Confidence 9999999999999999999999999999999999999999987777889999999999999 899999999999999
Q ss_pred EEEC
Q 005131 688 ILKG 691 (713)
Q Consensus 688 v~~~ 691 (713)
|++.
T Consensus 471 v~~~ 474 (475)
T cd07117 471 IYID 474 (475)
T ss_pred EEEe
Confidence 9863
No 23
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=100.00 E-value=9.4e-77 Score=666.69 Aligned_cols=401 Identities=19% Similarity=0.215 Sum_probs=350.6
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRR-LQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
.++.+|+.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++++++|+..+.+++|++
T Consensus 19 ~~P~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 90 (481)
T TIGR03216 19 INPVDGRVIARVHEAG--------AAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKP 90 (481)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCc
Confidence 4567899999887765 99999999999999997 99999999999999999999999999998888888877
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccc-cCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQL-ADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
..+.. ..|+..+++.+++|+. .....+........ ..+...+.+++|+|||++|+|| ||+.++ ++
T Consensus 91 ~~~~~-----------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~ 159 (481)
T TIGR03216 91 RSLAS-----------HLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWK 159 (481)
T ss_pred HHHHh-----------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHH
Confidence 64421 1477788888888887 33332222211100 1134567899999999999999 999985 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-C-chhHHhhhcCCCccEEEecCCHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNRLVSQIK 497 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 497 (713)
++|||++||+||+|||+.+|.++.++++++.++ |+|+|++|+|+| + ++++++|..||+||+|+||||+.+|+.|+
T Consensus 160 ~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~a---glP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~ 236 (481)
T TIGR03216 160 VGPALACGNTVVVKPSEETPGTATLLGEVMNAV---GVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIM 236 (481)
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHc---CCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999 899999999997 3 35889999999999999999999999999
Q ss_pred Hhc---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH-------------
Q 005131 498 EST---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL------------- 560 (713)
Q Consensus 498 ~~~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l------------- 560 (713)
+.+ .+|+++|||||||+||++|||+|.| ..+++++|+|+||.|++++|+|||+++||+|+++|
T Consensus 237 ~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 316 (481)
T TIGR03216 237 KAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD 316 (481)
T ss_pred HHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 875 5999999999999999999999999 56777778899999999999999999999999987
Q ss_pred ---------------------HHHHHhCCCEE-EcCCc--------cccccC------C-CCCCCccccccCceEEEEEe
Q 005131 561 ---------------------IDNLRSEGVTL-YGGPR--------ASSLLN------I-PEPNSFHHEYNSMACTIEIV 603 (713)
Q Consensus 561 ---------------------~~~~~~~Ga~l-~gg~~--------~~~~~~------v-~~~~~~~eE~FgPvl~v~~~ 603 (713)
+++++++|+++ +||.. .+.|+. + ++|++++||+||||++|++|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~ 396 (481)
T TIGR03216 317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396 (481)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence 35667789998 78753 234542 3 78999999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhce
Q 005131 604 DDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 683 (713)
Q Consensus 604 ~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~ 683 (713)
+|+||||+++|+++|||++||||+|.+++.++++++++|+||||++....+.+||||+|+||+|+ ++|++|+++||
T Consensus 397 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~f~ 472 (481)
T TIGR03216 397 DSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGR----EGGVHSLEFYT 472 (481)
T ss_pred CCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCc----CchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999887667789999999999999 88999999999
Q ss_pred eEEEEEEC
Q 005131 684 TTRWILKG 691 (713)
Q Consensus 684 ~~k~v~~~ 691 (713)
+.|+|+++
T Consensus 473 ~~k~v~~~ 480 (481)
T TIGR03216 473 ELTNVCIK 480 (481)
T ss_pred ceEEEEEe
Confidence 99999863
No 24
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=100.00 E-value=1.2e-76 Score=664.12 Aligned_cols=401 Identities=20% Similarity=0.247 Sum_probs=348.4
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++...+++|++.
T Consensus 17 ~~P~t~~~i~~~~~~~--------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 88 (474)
T cd07130 17 ISPANGEPIARVRQAT--------PEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKIL 88 (474)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 4567889888877664 89999999999999999999999999999999999999999999987777777765
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhcc-cCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLANM-EDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++ ..|+..+++.+++++.. ....+...+.. ..+...+..++|+|||++|+|| ||+.++ ++++
T Consensus 89 ~~a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 154 (474)
T cd07130 89 PEG------------LGEVQEMIDICDFAVGLSRQLYGLTIPSE--RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAA 154 (474)
T ss_pred HHH------------HHHHHHHHHHHHHHHHhHHHhcCccccCC--CCCceEEEEEecceeEEEEccCCCHHHHHHHHhh
Confidence 432 15778888888888763 22222222111 1244567889999999999999 999885 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhc-cccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVI-PENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al-~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
|||++||+||+|||+.+|.++.++++++.++| ..|+|+|++|+|+|+.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 155 ~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~a 234 (474)
T cd07130 155 IALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAV 234 (474)
T ss_pred HHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHH
Confidence 99999999999999999999999999988776 44699999999998756789999999999999999999999999864
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH----------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL---------------- 560 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l---------------- 560 (713)
.+|+++|||||||+||++|||++.| ..+++++++|+||.|++++|+|||+++||+|+++|
T Consensus 235 a~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 235 AARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred HhcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence 5899999999999999999999999 66778888899999999999999999999999987
Q ss_pred ------------------HHHHHhCCCEE-EcCCc---cccccC------CCCCCCccccccCceEEEEEeCCHHHHHHH
Q 005131 561 ------------------IDNLRSEGVTL-YGGPR---ASSLLN------IPEPNSFHHEYNSMACTIEIVDDVHAAIGH 612 (713)
Q Consensus 561 ------------------~~~~~~~Ga~l-~gg~~---~~~~~~------v~~~~~~~eE~FgPvl~v~~~~~~~eAi~~ 612 (713)
+++++++|+++ +||.. .+.|+. +++|++++||+||||++|++|+|+||||++
T Consensus 315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 394 (474)
T cd07130 315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAW 394 (474)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCCCHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 35677789999 88864 244542 355899999999999999999999999999
Q ss_pred HHccCCCceeEEEcCCHHHHHHHHhc--cCeeeEEEcCCC-CCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 613 IHQHGSGHTDCIITNDSEAAEIFLRQ--VDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 613 ~N~~~~gL~a~v~t~d~~~a~~~~~~--l~~G~v~iN~~~-~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+|+++|||++||||+|.+++++++++ +++|.||||+++ ...+.+||||+|.||+|+ ++|++|+++||+.|+|+
T Consensus 395 aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~----~~g~~~~~~f~~~k~~~ 470 (474)
T cd07130 395 NNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGR----ESGSDAWKQYMRRSTCT 470 (474)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCc----cchHHHHHHHhheEEEE
Confidence 99999999999999999999999987 999999999865 445789999999999998 89999999999999988
Q ss_pred EC
Q 005131 690 KG 691 (713)
Q Consensus 690 ~~ 691 (713)
++
T Consensus 471 ~~ 472 (474)
T cd07130 471 IN 472 (474)
T ss_pred Ee
Confidence 75
No 25
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-76 Score=667.06 Aligned_cols=399 Identities=18% Similarity=0.190 Sum_probs=350.9
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+..+.+++|++.
T Consensus 27 ~nP~tg~~i~~~~~~~--------~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 98 (488)
T PRK13252 27 INPATGEVLATVQAAT--------PADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPI 98 (488)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 4567899999887764 99999999999999999999999999999999999999999999988877777765
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++. ..|+..+++.+++++. .....+...+. ..+...+++++|+|||++|+|| ||+.++ ++++
T Consensus 99 ~~a~-----------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~ 164 (488)
T PRK13252 99 QETS-----------VVDIVTGADVLEYYAGLAPALEGEQIPL---RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSA 164 (488)
T ss_pred HHHH-----------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHH
Confidence 4421 1477788888988887 32222222111 1244567899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+|+..+++.|..||+||+|+||||+++|+.|++++
T Consensus 165 ~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~a---glP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa 241 (488)
T PRK13252 165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEA---GLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAA 241 (488)
T ss_pred HHHhcCCeEEEeCCccCcHHHHHHHHHHHHc---CcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 899999999998645889999999999999999999999999865
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------------- 561 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------- 561 (713)
++|+++|||||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 242 ~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 321 (488)
T PRK13252 242 ASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPAT 321 (488)
T ss_pred hcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 5999999999999999999999999 567788888999999999999999999999999773
Q ss_pred ------------------HHHHhCCCEE-EcCCc-------cccccC------C-CCCCCccccccCceEEEEEeCCHHH
Q 005131 562 ------------------DNLRSEGVTL-YGGPR-------ASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 562 ------------------~~~~~~Ga~l-~gg~~-------~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
++++++|+++ +||.. .+.|+. + ++|++++||+||||++|++|+|+||
T Consensus 322 ~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~e 401 (488)
T PRK13252 322 NFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDE 401 (488)
T ss_pred cccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHH
Confidence 4566789998 77753 134442 3 6899999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
||+++|+++|||++||||+|.+++.++++++++|.|+||++....+.+||||+|.||+|+ ++|++|+++||+.|+|
T Consensus 402 ai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~i 477 (488)
T PRK13252 402 VIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGR----ENGIATLEHYTQIKSV 477 (488)
T ss_pred HHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCc----CChHHHHHHhcceEEE
Confidence 999999999999999999999999999999999999999876666789999999999999 8899999999999999
Q ss_pred EECC
Q 005131 689 LKGS 692 (713)
Q Consensus 689 ~~~~ 692 (713)
++..
T Consensus 478 ~~~~ 481 (488)
T PRK13252 478 QVEM 481 (488)
T ss_pred EEeC
Confidence 8753
No 26
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=100.00 E-value=5.2e-77 Score=667.96 Aligned_cols=396 Identities=19% Similarity=0.220 Sum_probs=349.1
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRR--LQAMSSEDRKKILLDIADALEANEELIIEENEADVAA 342 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~ 342 (713)
.++.||+.++++...+ .+|+++++++|++||+. |++++.++|.++|++++++|++++++|++.+.+++|+
T Consensus 24 ~~P~t~~~i~~v~~~~--------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk 95 (476)
T cd07142 24 IDPRNGEVIAHVAEGD--------AEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGK 95 (476)
T ss_pred ECCCCCCEEEEEcCCC--------HHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Confidence 3567899999987664 99999999999999975 9999999999999999999999999999888888887
Q ss_pred HHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 343 AEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 343 ~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
+..+++ ..|+..+++.+++++. .....+...+. ..+...++.++|+|||++|+|| ||+.++ ++
T Consensus 96 ~~~~a~-----------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 161 (476)
T cd07142 96 PYEQAR-----------YAEVPLAARLFRYYAGWADKIHGMTLPA---DGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWK 161 (476)
T ss_pred CHHHHH-----------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeceeeEEEECCCccHHHHHHHH
Confidence 764421 1478888889998886 33333332221 1223567899999999999999 999985 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
++|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+| +.++++.|..||++|+|+||||+++|+.|++
T Consensus 162 i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~a---GlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~ 238 (476)
T cd07142 162 VGPALACGNTIVLKPAEQTPLSALLAAKLAAEA---GLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQ 238 (476)
T ss_pred HHHHHHcCCEEEEECCCcccHHHHHHHHHHHHc---CcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999 899999999997 4568899999999999999999999999998
Q ss_pred hc----CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH------------
Q 005131 499 ST----KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------ 561 (713)
Q Consensus 499 ~~----~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------ 561 (713)
.+ ++|+++|||||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 239 ~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~ 318 (476)
T cd07142 239 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPF 318 (476)
T ss_pred HHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 64 3899999999999999999999999 567888889999999999999999999999999873
Q ss_pred ----------------------HHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHH
Q 005131 562 ----------------------DNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 562 ----------------------~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||
T Consensus 319 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07142 319 RKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDE 398 (476)
T ss_pred CCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHH
Confidence 4566789998 787642 34442 3 6899999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||+|+||+|+ ++|++|+++||++|+|
T Consensus 399 ai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~v 474 (476)
T cd07142 399 VIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGR----EKGIYALNNYLQVKAV 474 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCc----cchHHHHHHhhheeEE
Confidence 999999999999999999999999999999999999999887777889999999999999 8899999999999998
Q ss_pred E
Q 005131 689 L 689 (713)
Q Consensus 689 ~ 689 (713)
+
T Consensus 475 ~ 475 (476)
T cd07142 475 V 475 (476)
T ss_pred e
Confidence 6
No 27
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=100.00 E-value=6.7e-77 Score=662.64 Aligned_cols=392 Identities=17% Similarity=0.195 Sum_probs=346.1
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.||+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+.....+.|++..
T Consensus 3 ~P~tg~~i~~~~~~~--------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 74 (448)
T TIGR01780 3 NPATGEIIGTVPDQG--------VEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLK 74 (448)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 567899999887765 999999999999999999999999999999999999999999998766666666553
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAAL 422 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ 422 (713)
+. ..|+..+++.+++++. ..+..+...+.. ..+...+..++|+|||++|+|| ||++++ ++++|
T Consensus 75 ~a------------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 140 (448)
T TIGR01780 75 EA------------KGEILYAASFLEWFAEEAKRVYGDTIPSP--QSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGA 140 (448)
T ss_pred HH------------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHH
Confidence 31 1588888999988876 333333322211 1344567789999999999999 999985 99999
Q ss_pred HHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC--chhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 423 AIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR--EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 423 ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~--~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
||++||+||+|||+.+|+++..+++++.++ |+|+|++|+|+|. .++++.|..||++|+|+||||+++|+.|++.+
T Consensus 141 ALaaGN~VvlKps~~~p~~~~~l~~~~~~a---GlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~a 217 (448)
T TIGR01780 141 ALAAGCTVVVKPAEQTPLSALALARLAEQA---GIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQS 217 (448)
T ss_pred HHHcCCeEeeECCccchHHHHHHHHHHHHc---CCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999999 8999999999974 67789999999999999999999999999864
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH----------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL---------------- 560 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l---------------- 560 (713)
.+|+++|||||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|
T Consensus 218 a~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~ 297 (448)
T TIGR01780 218 ASTVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEG 297 (448)
T ss_pred hhcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 5999999999999999999999999 66788888899999999999999999999999987
Q ss_pred ------------------HHHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHH
Q 005131 561 ------------------IDNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIG 611 (713)
Q Consensus 561 ------------------~~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~ 611 (713)
+++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||+
T Consensus 298 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 377 (448)
T TIGR01780 298 VTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIA 377 (448)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHH
Confidence 35677889998 788542 44542 3 7899999999999999999999999999
Q ss_pred HHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEE
Q 005131 612 HIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 686 (713)
Q Consensus 612 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k 686 (713)
++|+++|||++||||+|.++++++++++++|.||||++....+.+||||+|+||+|+ ++|++|+++||++|
T Consensus 378 ~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~~~~~~~~k 448 (448)
T TIGR01780 378 IANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGR----EGSKYGIEEYLETK 448 (448)
T ss_pred HHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCc----cchHHHHHHHhccC
Confidence 999999999999999999999999999999999999986666789999999999999 88999999999876
No 28
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=100.00 E-value=2.8e-76 Score=662.35 Aligned_cols=401 Identities=22% Similarity=0.257 Sum_probs=352.0
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.||+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++...+++|++.
T Consensus 18 ~~P~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 89 (478)
T cd07086 18 RNPANGEPIARVFPAS--------PEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKIL 89 (478)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 4567899999988775 99999999999999999999999999999999999999999999988877777765
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++ ..|+..+++.+++++. ..+..+...+.. ..+...+++++|+|||++|+|| ||+.++ ++++
T Consensus 90 ~~a------------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~ 155 (478)
T cd07086 90 PEG------------LGEVQEMIDICDYAVGLSRMLYGLTIPSE--RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAA 155 (478)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEEecceeEEEECCCCcHHHHHHHHHH
Confidence 432 2578888888888876 333333222211 1234567899999999999999 999885 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhcccc-CCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPEN-VGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~g-lP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
+||++||+||+|||+.+|.++..+++++.++|.+. +|+|++|+|+|+..++++|..||++|+|+||||+++|+.|++.+
T Consensus 156 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a 235 (478)
T cd07086 156 IALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETV 235 (478)
T ss_pred HHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999996654 99999999998655899999999999999999999999998864
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
.+|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 236 a~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 315 (478)
T cd07086 236 ARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEG 315 (478)
T ss_pred hccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCC
Confidence 5999999999999999999999999 567788888999999999999999999999999873
Q ss_pred -------------------HHHHhCCCEE-EcCCcc-----ccccC------C-CCCCCccccccCceEEEEEeCCHHHH
Q 005131 562 -------------------DNLRSEGVTL-YGGPRA-----SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAA 609 (713)
Q Consensus 562 -------------------~~~~~~Ga~l-~gg~~~-----~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eA 609 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|||
T Consensus 316 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~dea 395 (478)
T cd07086 316 TLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEA 395 (478)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHH
Confidence 4566789999 787542 33542 2 67999999999999999999999999
Q ss_pred HHHHHccCCCceeEEEcCCHHHHHHHHhc--cCeeeEEEcCCC-CCCCCCCccCccceeeccccCCCcccchHhhceeEE
Q 005131 610 IGHIHQHGSGHTDCIITNDSEAAEIFLRQ--VDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 686 (713)
Q Consensus 610 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~--l~~G~v~iN~~~-~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k 686 (713)
|+++|+++|||++||||+|.+++++++++ +++|+|+||+++ ...+.+||||+|.||+|+ ++|++|+++|+++|
T Consensus 396 i~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~----~~g~~~~~~f~~~k 471 (478)
T cd07086 396 IAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGR----ESGSDAWKQYMRRS 471 (478)
T ss_pred HHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCc----cchHHHHHHhhceE
Confidence 99999999999999999999999999999 999999999874 445789999999999999 88999999999999
Q ss_pred EEEEC
Q 005131 687 WILKG 691 (713)
Q Consensus 687 ~v~~~ 691 (713)
+|+++
T Consensus 472 ~i~~~ 476 (478)
T cd07086 472 TCTIN 476 (478)
T ss_pred EEEEe
Confidence 99875
No 29
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=100.00 E-value=3.3e-76 Score=663.93 Aligned_cols=397 Identities=20% Similarity=0.203 Sum_probs=349.4
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+|+++++++|++||+.|++++.++|.++|++++++|++++++|+....+++|++.
T Consensus 21 ~nP~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~ 92 (488)
T TIGR02299 21 LSPATNEVLGSVARGG--------AADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPL 92 (488)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcH
Confidence 4567889888877664 89999999999999999999999999999999999999999999988888877766
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-cc-CccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-ME-DPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIA 420 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~ 420 (713)
.+. ..|+..+++.+++++. .. ...+...+. .+...+.+++|+|||++|+|| ||+.++ +++
T Consensus 93 ~~a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~ 156 (488)
T TIGR02299 93 RQT------------RQQVIRAAENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKI 156 (488)
T ss_pred HHH------------HHHHHHHHHHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCccHHHHHHHHH
Confidence 442 1578888888888876 32 222222211 134567889999999999999 999985 999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
+|||++||+||+|||+.+|.++.++++++.++ |+|+|+||+|+| +.++++.|..||.||+|+||||+++|++|++.
T Consensus 157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a---GlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 233 (488)
T TIGR02299 157 APALAFGNTVVLKPAEWSPLTAARLAEIAKEA---GLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRN 233 (488)
T ss_pred HHHHHcCCEEEEECchhchHHHHHHHHHHHHc---CcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999 899999999997 46678889999999999999999999999987
Q ss_pred c---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH--------------
Q 005131 500 T---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-------------- 561 (713)
Q Consensus 500 ~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-------------- 561 (713)
+ ++|+++|||||||+||++|||++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 234 aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~ 313 (488)
T TIGR02299 234 GADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDP 313 (488)
T ss_pred HHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCC
Confidence 4 6999999999999999999999999 567778888999999999999999999999999872
Q ss_pred --------------------HHHHhCCCEE-EcCCcc----------ccccC------C-CCCCCccccccCceEEEEEe
Q 005131 562 --------------------DNLRSEGVTL-YGGPRA----------SSLLN------I-PEPNSFHHEYNSMACTIEIV 603 (713)
Q Consensus 562 --------------------~~~~~~Ga~l-~gg~~~----------~~~~~------v-~~~~~~~eE~FgPvl~v~~~ 603 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|
T Consensus 314 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~ 393 (488)
T TIGR02299 314 ETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPF 393 (488)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEee
Confidence 4566789998 777531 33442 3 68999999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhce
Q 005131 604 DDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 683 (713)
Q Consensus 604 ~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~ 683 (713)
+|+||||+++|+++|||++||||+|.++++++++++++|.||||+.....+.+||||+|+||+|+ ++|++|+++||
T Consensus 394 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~~~ 469 (488)
T TIGR02299 394 KDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGR----EGGTYSFDFYT 469 (488)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCc----cchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999887666789999999999999 88999999999
Q ss_pred eEEEEEECC
Q 005131 684 TTRWILKGS 692 (713)
Q Consensus 684 ~~k~v~~~~ 692 (713)
+.|+|+++.
T Consensus 470 ~~k~i~~~~ 478 (488)
T TIGR02299 470 ETKNVALAL 478 (488)
T ss_pred ceEEEEEec
Confidence 999999865
No 30
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=100.00 E-value=2.6e-76 Score=660.46 Aligned_cols=398 Identities=18% Similarity=0.199 Sum_probs=352.5
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++.+.+++|++..
T Consensus 3 ~P~t~~~i~~~~~~~--------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 74 (457)
T cd07090 3 EPATGEVLATVHCAG--------AEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIE 74 (457)
T ss_pred CCCCCCEEEEEcCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 567889889877765 999999999999999999999999999999999999999999999888888877764
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhcc-cCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLANM-EDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAAL 422 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ 422 (713)
+. ..|+..+++.++++++. ....++..+. ..+...+++++|+|||++|+|| ||+.++ ++++|
T Consensus 75 ~a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ 139 (457)
T cd07090 75 EA------------RVDIDSSADCLEYYAGLAPTLSGEHVPL---PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAP 139 (457)
T ss_pred HH------------HHHHHHHHHHHHHHHHHHHHhCCeeecc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence 42 25788889999988873 2222222211 2355678899999999999999 999985 99999
Q ss_pred HHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc--
Q 005131 423 AIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST-- 500 (713)
Q Consensus 423 ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~-- 500 (713)
||++||+||+|||+.+|.++..+++++.++ |+|+|++|+|+|+.++++.|..||++|+|+||||+++|+.|++.+
T Consensus 140 ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~a---GlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 216 (457)
T cd07090 140 ALACGNAMVYKPSPFTPLTALLLAEILTEA---GLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK 216 (457)
T ss_pred HHhcCCeeeecCCCcCcHHHHHHHHHHHHc---CCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 999999999999999999999999999999 899999999998656888899999999999999999999999875
Q ss_pred -CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH------------------
Q 005131 501 -KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL------------------ 560 (713)
Q Consensus 501 -~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l------------------ 560 (713)
++|+++|||||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|
T Consensus 217 ~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 296 (457)
T cd07090 217 GIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQ 296 (457)
T ss_pred cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 4999999999999999999999999 56777888899999999999999999999999987
Q ss_pred ----------------HHHHHhCCCEE-EcCCcc--------ccccC------C-CCCCCccccccCceEEEEEeCCHHH
Q 005131 561 ----------------IDNLRSEGVTL-YGGPRA--------SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 561 ----------------~~~~~~~Ga~l-~gg~~~--------~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
+++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||
T Consensus 297 ~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~de 376 (457)
T cd07090 297 MGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEE 376 (457)
T ss_pred cccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHH
Confidence 24567789998 777531 33442 3 6899999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
||+++|+++|||++||||+|.++++++++++++|.|+||+++...+.+||||+|.||+|+ ++|++|+++||+.|+|
T Consensus 377 ai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~~~~f~~~k~~ 452 (457)
T cd07090 377 VIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGR----ENGTAALEHYTQLKTV 452 (457)
T ss_pred HHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCc----cchHHHHHHHhCeEEE
Confidence 999999999999999999999999999999999999999987667789999999999999 8899999999999999
Q ss_pred EECCC
Q 005131 689 LKGSG 693 (713)
Q Consensus 689 ~~~~~ 693 (713)
++.++
T Consensus 453 ~~~~~ 457 (457)
T cd07090 453 YVEMG 457 (457)
T ss_pred EEeCC
Confidence 87653
No 31
>PLN02467 betaine aldehyde dehydrogenase
Probab=100.00 E-value=2.7e-76 Score=662.61 Aligned_cols=401 Identities=20% Similarity=0.204 Sum_probs=351.2
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHH-----HHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESS-----RRLQAMSSEDRKKILLDIADALEANEELIIEENEAD 339 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~-----~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~ 339 (713)
.++.+|+.++++...+ .+|+++|+++|++|| +.|++++.++|.++|++++++|++++++|+....++
T Consensus 28 ~~P~t~~~i~~~~~~~--------~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e 99 (503)
T PLN02467 28 VNPATEETIGDIPAAT--------AEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLD 99 (503)
T ss_pred ECCCCCCEEEEEcCCC--------HHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3467889889877664 999999999999999 899999999999999999999999999999877777
Q ss_pred HHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccc-cccccCCceeeeeeccceeEEEEecC-CchHH
Q 005131 340 VAAAEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILK-KTQLADGLFLEKTSCPLGVLLIVFES-RPDAL 416 (713)
Q Consensus 340 ~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~ 416 (713)
+|++..++ ..|+..+++.+++++. ..+..+.... ......+...+++|+|+|||++|+|| ||+++
T Consensus 100 ~Gk~~~~a------------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 167 (503)
T PLN02467 100 CGKPLDEA------------AWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLM 167 (503)
T ss_pred cCCCHHHH------------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHH
Confidence 77776442 1588888999998886 3333332211 01001234567899999999999999 99998
Q ss_pred H-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHH
Q 005131 417 V-QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVS 494 (713)
Q Consensus 417 ~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~ 494 (713)
+ ++++|||++||+||+|||+.+|.++..+++++.++ |+|+|++|+|+| +.++++.|..||+||+|+||||+.+|+
T Consensus 168 ~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~ea---g~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~ 244 (503)
T PLN02467 168 ATWKVAPALAAGCTAVLKPSELASVTCLELADICREV---GLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGR 244 (503)
T ss_pred HHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHc---CcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHH
Confidence 5 99999999999999999999999999999999999 899999999998 467889899999999999999999999
Q ss_pred HHHHhc---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------
Q 005131 495 QIKEST---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------- 561 (713)
Q Consensus 495 ~i~~~~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------- 561 (713)
+|++.+ .||+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|||||++++|+|+++|+
T Consensus 245 ~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g 324 (503)
T PLN02467 245 KIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKIS 324 (503)
T ss_pred HHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence 999865 5999999999999999999999999 567778889999999999999999999999999872
Q ss_pred -------------------------HHHHhCCCEE-EcCCcc-----ccccC------C-CCCCCccccccCceEEEEEe
Q 005131 562 -------------------------DNLRSEGVTL-YGGPRA-----SSLLN------I-PEPNSFHHEYNSMACTIEIV 603 (713)
Q Consensus 562 -------------------------~~~~~~Ga~l-~gg~~~-----~~~~~------v-~~~~~~~eE~FgPvl~v~~~ 603 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|
T Consensus 325 ~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 404 (503)
T PLN02467 325 DPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTF 404 (503)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEee
Confidence 4566789998 777542 33442 3 68999999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhce
Q 005131 604 DDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 683 (713)
Q Consensus 604 ~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~ 683 (713)
+|+||||+++|+++|||+++|||+|.+++.++++++++|.||||+++.....+||||+|.||+|+ ++|++|+++||
T Consensus 405 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~ft 480 (503)
T PLN02467 405 STEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGR----ELGEWGLENYL 480 (503)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCC----cchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999987666789999999999999 89999999999
Q ss_pred eEEEEEECC
Q 005131 684 TTRWILKGS 692 (713)
Q Consensus 684 ~~k~v~~~~ 692 (713)
+.|+|++..
T Consensus 481 ~~k~i~~~~ 489 (503)
T PLN02467 481 SVKQVTKYI 489 (503)
T ss_pred CeEEEEEec
Confidence 999999853
No 32
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=100.00 E-value=4.4e-76 Score=659.06 Aligned_cols=398 Identities=22% Similarity=0.256 Sum_probs=349.0
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+|+++++++|++||+.|++++..+|.++|++++++|++++++|+..+.+++|++.
T Consensus 15 ~~P~t~~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 86 (465)
T cd07151 15 LNPYTGETLAEIPAAS--------KEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTR 86 (465)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 3467889888877764 89999999999999999999999999999999999999999999988888877765
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhcc-cCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLANM-EDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+. ..|+..+++.+++++.. .+..+...+.. ..+...+++++|+|||++|+|| ||++++ ++++
T Consensus 87 ~~a------------~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 152 (465)
T cd07151 87 IKA------------NIEWGAAMAITREAATFPLRMEGRILPSD--VPGKENRVYREPLGVVGVISPWNFPLHLSMRSVA 152 (465)
T ss_pred HHH------------HHHHHHHHHHHHHHHHhHHHhcCccccCC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 431 15788889999988863 22222222111 1344567889999999999999 999884 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHH-HHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 422 LAIRSGNGLLLKGGKEAKRSN-AILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~-~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
|||++||+||+|||+.+|.++ .++.+++.++ |+|+|+||+|+| +.++++.|..||.+++|+||||+++|+.|++.
T Consensus 153 ~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~a---G~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 229 (465)
T cd07151 153 PALALGNAVVLKPASDTPITGGLLLAKIFEEA---GLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGEL 229 (465)
T ss_pred HHHHcCCEEEEECCCCCcHhHHHHHHHHHHHc---CcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999996 6899999999 899999999997 46788889999999999999999999999876
Q ss_pred c---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH--------------
Q 005131 500 T---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-------------- 561 (713)
Q Consensus 500 ~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-------------- 561 (713)
+ .+|+++|||||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 230 aa~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 309 (465)
T cd07151 230 AGRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDP 309 (465)
T ss_pred HHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 4 5999999999999999999999999 667888899999999999999999999999999873
Q ss_pred --------------------HHHHhCCCEE-EcCCccccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHH
Q 005131 562 --------------------DNLRSEGVTL-YGGPRASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHI 613 (713)
Q Consensus 562 --------------------~~~~~~Ga~l-~gg~~~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~ 613 (713)
++++++|+++ +||...+.|+. + ++|++++||+||||++|++|+|+||||+++
T Consensus 310 ~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 389 (465)
T cd07151 310 DTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELA 389 (465)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHH
Confidence 3556789988 78765555542 3 689999999999999999999999999999
Q ss_pred HccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCC-CCCCCccCccceeeccccCCCcccchHhhceeEEEEEEC
Q 005131 614 HQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKG 691 (713)
Q Consensus 614 N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~ 691 (713)
|+++|||+++|||+|.+++.++++++++|.|+||+++.. .+.+||||+|.||+|+ ++|++||++||+.|+|++.
T Consensus 390 n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 390 NDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGR----FNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred hCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCc----CChHHHHHHhhceEEEEec
Confidence 999999999999999999999999999999999988544 4679999999999999 8899999999999999864
No 33
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=100.00 E-value=4e-76 Score=658.31 Aligned_cols=395 Identities=18% Similarity=0.184 Sum_probs=345.7
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+....+++|++..
T Consensus 3 ~p~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 74 (456)
T cd07107 3 NPATGQVLARVPAAS--------AADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVS 74 (456)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH
Confidence 467899999887764 999999999999999999999999999999999999999999999877777776654
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAAL 422 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ 422 (713)
+. ..|+..+++.++++++ .....+...+. ..+...++.++|+|||++|+|| ||+.++ ++++|
T Consensus 75 ~a------------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ 139 (456)
T cd07107 75 AM------------LGDVMVAAALLDYFAGLVTELKGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAA 139 (456)
T ss_pred HH------------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhH
Confidence 31 2678888888888876 32233322221 1234567899999999999999 999985 99999
Q ss_pred HHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 423 AIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 423 ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+|+ .++++.|..||.+++|+||||+++|+.|++++
T Consensus 140 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~~----lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa 215 (456)
T cd07107 140 PLAAGNTVVVKPPEQAPLSALRLAELAREV----LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAA 215 (456)
T ss_pred HHHcCCEEEEeCCCCChHHHHHHHHHHHHh----CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999999999999886 677799999974 56788899999999999999999999999875
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHHH-HHHHHc-cCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMAK-QIVLDA-KVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A~-~~~~~~-~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
++|+++|||||||+||++|||++.|+ .+++++ |.|+||.|++++|||||+++||+|+++|+
T Consensus 216 ~~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 295 (456)
T cd07107 216 EGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPA 295 (456)
T ss_pred cCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 59999999999999999999999995 566664 66789999999999999999999999872
Q ss_pred -------------------HHHHhCCCEE-EcCCcc-------ccccC------C-CCCCCccccccCceEEEEEeCCHH
Q 005131 562 -------------------DNLRSEGVTL-YGGPRA-------SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 562 -------------------~~~~~~Ga~l-~gg~~~-------~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|
T Consensus 296 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~ 375 (456)
T cd07107 296 TTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEA 375 (456)
T ss_pred CCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHH
Confidence 4566789998 887531 33442 3 789999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
|||+++|+++|||++||||+|.++++++++++++|.|+||+++...+.+||||+|+||+|+ ++|++|+++||+.|+
T Consensus 376 eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~~~~~k~ 451 (456)
T cd07107 376 EMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGR----EECLEELLSYTQEKN 451 (456)
T ss_pred HHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCc----CchHHHHHHhhceEE
Confidence 9999999999999999999999999999999999999999987777889999999999999 889999999999999
Q ss_pred EEEC
Q 005131 688 ILKG 691 (713)
Q Consensus 688 v~~~ 691 (713)
|+++
T Consensus 452 v~~~ 455 (456)
T cd07107 452 VNVR 455 (456)
T ss_pred EEEe
Confidence 9863
No 34
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=100.00 E-value=4.4e-76 Score=661.26 Aligned_cols=400 Identities=20% Similarity=0.189 Sum_probs=347.4
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+.....++|++.
T Consensus 21 ~~P~t~~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~ 92 (478)
T cd07085 21 YNPATGEVIARVPLAT--------AEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTL 92 (478)
T ss_pred eCCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 4567899999887765 99999999999999999999999999999999999999999999987666666665
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++ ..|+...++.+++++. .....++..... ..+...+.+++|+|||++|+|| ||+.++ ++++
T Consensus 93 ~~a------------~~ev~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 158 (478)
T cd07085 93 ADA------------RGDVLRGLEVVEFACSIPHLLKGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFP 158 (478)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhCCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 432 1578888888888876 222333322211 1244578899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+|+.+.++.|..||+||+|+||||+++|+.|++.+
T Consensus 159 ~ALaaGN~VvlKps~~tp~~~~~l~~~l~~a---GlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (478)
T cd07085 159 MAIACGNTFVLKPSERVPGAAMRLAELLQEA---GLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA 235 (478)
T ss_pred HHHhcCCEEEEECCCcCcHHHHHHHHHHHHh---CCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 999999999998666788899999999999999999999998765
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------------- 561 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------- 561 (713)
++|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 236 ~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~ 315 (478)
T cd07085 236 ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGA 315 (478)
T ss_pred hcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 5999999999999999999999999 566777788999999999999999999999999883
Q ss_pred ------------------HHHHhCCCEE-EcCCc-------ccccc-C-----C-CCCCCccccccCceEEEEEeCCHHH
Q 005131 562 ------------------DNLRSEGVTL-YGGPR-------ASSLL-N-----I-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 562 ------------------~~~~~~Ga~l-~gg~~-------~~~~~-~-----v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
++++++|+++ +||.. .+.|+ + + ++|++++||+||||++|++|+|+||
T Consensus 316 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~de 395 (478)
T cd07085 316 DMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDE 395 (478)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHH
Confidence 4566789998 77753 13444 2 3 6899999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCC-CCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
||+++|+++|||++||||+|.+++.++++++++|.||||+++.. .+.+||||+|.||+|+ ++++|++|+++||+.|+
T Consensus 396 ai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~--~~~~g~~~~~~~~~~k~ 473 (478)
T cd07085 396 AIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGD--LHFYGKDGVRFYTQTKT 473 (478)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCC--CcCChHHHHHHhcceEE
Confidence 99999999999999999999999999999999999999987544 4679999999999994 22789999999999999
Q ss_pred EEEC
Q 005131 688 ILKG 691 (713)
Q Consensus 688 v~~~ 691 (713)
|+++
T Consensus 474 v~~~ 477 (478)
T cd07085 474 VTSR 477 (478)
T ss_pred EEEe
Confidence 9864
No 35
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=4.6e-76 Score=656.69 Aligned_cols=399 Identities=17% Similarity=0.195 Sum_probs=346.0
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRR-LQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
.++.+|+.++++...+ .+|+++++++|++||+. |+.+|.++|.++|++++++|++++++|+.....++|++
T Consensus 4 ~~P~t~~~i~~~~~~~--------~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 75 (455)
T cd07148 4 VNPFDLKPIGEVPTVD--------WAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKP 75 (455)
T ss_pred cCCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4577899999887775 99999999999999998 56799999999999999999999999998777777766
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccc--cccCCceeeeeeccceeEEEEecC-CchHHH-H
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKT--QLADGLFLEKTSCPLGVLLIVFES-RPDALV-Q 418 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~ 418 (713)
..++ ..|+...++.+++++. ..+..+...+.. ....+...+++++|+|||++|+|| ||+.++ +
T Consensus 76 ~~~a------------~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~ 143 (455)
T cd07148 76 LVDA------------KVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVH 143 (455)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHH
Confidence 5432 1467777777777775 333222221111 001244568899999999999999 999885 9
Q ss_pred HHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 419 IAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 419 ~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
++++||++||+||+|||+.+|.++..++++|.++ |+|+|+||+|+|+.+.++.|..||+||+|+||||+++|+.|++
T Consensus 144 ~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a---GlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~ 220 (455)
T cd07148 144 QVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA---GLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRS 220 (455)
T ss_pred HHHHHHHcCCEEEeeCCCcccHHHHHHHHHHHHc---CCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999 8999999999976567899999999999999999999999988
Q ss_pred hc--CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH--------------
Q 005131 499 ST--KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-------------- 561 (713)
Q Consensus 499 ~~--~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-------------- 561 (713)
++ .+|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 221 ~aa~~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 300 (455)
T cd07148 221 KLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDP 300 (455)
T ss_pred HhhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 64 5999999999999999999999999 567788889999999999999999999999999873
Q ss_pred --------------------HHHHhCCCEE-EcCCcc-ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005131 562 --------------------DNLRSEGVTL-YGGPRA-SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGH 612 (713)
Q Consensus 562 --------------------~~~~~~Ga~l-~gg~~~-~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~ 612 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||++
T Consensus 301 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~ 380 (455)
T cd07148 301 DTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQ 380 (455)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHH
Confidence 4577789998 787653 33432 3 68999999999999999999999999999
Q ss_pred HHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCC-CCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 613 IHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 613 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+|+++|||++||||+|.+++.+|++++++|.||||+++... +.+||||+|.||+|+ ++|++|+++||+.|+|++
T Consensus 381 ~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~----~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 381 ANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGT----GGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCC----CchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999986444 568999999999999 899999999999999863
No 36
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=100.00 E-value=1.1e-75 Score=652.98 Aligned_cols=391 Identities=19% Similarity=0.247 Sum_probs=344.1
Q ss_pred CCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCc
Q 005131 270 GERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYE 349 (713)
Q Consensus 270 ge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~ 349 (713)
|+.++++... +.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++.+.+++|++..++
T Consensus 1 ~~~i~~~~~~--------~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-- 70 (443)
T cd07152 1 GAVLGEVGVA--------DAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKA-- 70 (443)
T ss_pred CCEEEEEcCC--------CHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH--
Confidence 3556666655 499999999999999999999999999999999999999999999988888887665431
Q ss_pred hhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHh
Q 005131 350 KPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRS 426 (713)
Q Consensus 350 ~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaa 426 (713)
..|+..+++.+++++. ..++.+...+. ..+...+.+++|+|||++|+|| ||++++ ++++|||++
T Consensus 71 ----------~~ev~~~i~~l~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaa 137 (443)
T cd07152 71 ----------GFEVGAAIGELHEAAGLPTQPQGEILPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALAL 137 (443)
T ss_pred ----------HHHHHHHHHHHHHHHHhHHHhCCccccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHc
Confidence 2688899999999886 33343333221 1355667899999999999999 999985 999999999
Q ss_pred CCEEEEeCCCCchHHH-HHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CC
Q 005131 427 GNGLLLKGGKEAKRSN-AILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KI 502 (713)
Q Consensus 427 GN~vv~Kps~~~~~~~-~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~ 502 (713)
||+||+|||+.+|.++ .+++++|.++ |+|+|++|+|+|+.++++.|..||++|+|+||||+.+|+.|++++ .+
T Consensus 138 GN~VvlKps~~~p~~~~~~l~~~~~~a---g~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~ 214 (443)
T cd07152 138 GNAVVLKPDPRTPVSGGVVIARLFEEA---GLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLK 214 (443)
T ss_pred CCEEEEECCcccchhHHHHHHHHHHHh---CcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC
Confidence 9999999999999996 7899999999 899999999998666788899999999999999999999998864 59
Q ss_pred CeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH--------------------
Q 005131 503 PVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-------------------- 561 (713)
Q Consensus 503 ~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-------------------- 561 (713)
|+++|||||||+||++|||++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 215 ~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gp 294 (443)
T cd07152 215 KVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGP 294 (443)
T ss_pred cEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCC
Confidence 99999999999999999999999 567788899999999999999999999999999873
Q ss_pred --------------HHHHhCCCEE-EcCCccccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCC
Q 005131 562 --------------DNLRSEGVTL-YGGPRASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSG 619 (713)
Q Consensus 562 --------------~~~~~~Ga~l-~gg~~~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~g 619 (713)
++++++|+++ +||...+.|+. + ++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 295 li~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~g 374 (443)
T cd07152 295 LINARQLDRVHAIVDDSVAAGARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYG 374 (443)
T ss_pred CcCHHHHHHHHHHHHHHHhCCCEEEeccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCcc
Confidence 4566689998 78765555542 3 689999999999999999999999999999999999
Q ss_pred ceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCC-CCCCccCccceeec-cccCCCcccchHhhceeEEEEEE
Q 005131 620 HTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFC-DGARFGLGAEVGIS-TSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 620 L~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~g-~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
|+++|||+|.+++.++++++++|.||||+++... +.+||||+|.||+| + ++|++|+++||++|++++
T Consensus 375 L~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~----~~g~~~l~~~~~~k~~~~ 443 (443)
T cd07152 375 LSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSR----FGGPANWEEFTQWQWVTV 443 (443)
T ss_pred ceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCCc----cCcHHHHHHhhceeEEeC
Confidence 9999999999999999999999999999885444 67999999999999 6 889999999999999863
No 37
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=100.00 E-value=9.5e-76 Score=655.46 Aligned_cols=399 Identities=22% Similarity=0.286 Sum_probs=349.3
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+....+++|++.
T Consensus 4 ~~P~t~~~~~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 75 (452)
T cd07147 4 TNPYTGEVVARVALAG--------PDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPI 75 (452)
T ss_pred cCCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4577899999887765 99999999999999999999999999999999999999999999977777777665
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcccccccccc--ccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQ--LADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
.++ ..|+...++.+++++. ..+..++...... ...+...++.++|+|||++|+|| ||+.++ ++
T Consensus 76 ~~a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~ 143 (452)
T cd07147 76 KDA------------RGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHK 143 (452)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHH
Confidence 432 1578888888888876 3333333221110 01344567889999999999999 999885 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
+++||++||+||+|||+.+|.++.++++++.++ |+|+|+||+|+|+.+.++.|..||++|+|+||||+.+|+.|++.
T Consensus 144 ~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~a---g~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~ 220 (452)
T cd07147 144 VAPAIAAGCPFVLKPASRTPLSALILGEVLAET---GLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKAR 220 (452)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHc---CCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999 89999999999866678888889999999999999999999987
Q ss_pred c-CCCeEEecCccceEEEcCCCCHHHHH-HHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------
Q 005131 500 T-KIPVLGHADGICHIYVDKSADMDMAK-QIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------------- 561 (713)
Q Consensus 500 ~-~~~v~lElgG~~p~iV~~dADl~~A~-~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------- 561 (713)
+ .+|+++|+|||||+||++|||++.|+ .+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 221 a~~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~ 300 (452)
T cd07147 221 AGKKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDAT 300 (452)
T ss_pred hCcCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 5 58999999999999999999999994 57888899999999999999999999999999873
Q ss_pred ------------------HHHHhCCCEE-EcCCccccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHc
Q 005131 562 ------------------DNLRSEGVTL-YGGPRASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQ 615 (713)
Q Consensus 562 ------------------~~~~~~Ga~l-~gg~~~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~ 615 (713)
++++++|+++ +||...+.|+. + ++|++++||+||||++|++|+|+||||+++|+
T Consensus 301 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~ 380 (452)
T cd07147 301 DVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVND 380 (452)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhC
Confidence 4566789998 77766665552 3 68999999999999999999999999999999
Q ss_pred cCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCC-CCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 616 HGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 616 ~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
++|||++||||+|.+++.++++++++|.||||+++.. .+.+||||+|+||+|+ ++|++|+++||+.|+|++
T Consensus 381 ~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 381 SKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGR----EGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCC----CChHHHHHHhcceeEEeC
Confidence 9999999999999999999999999999999987544 4789999999999999 899999999999999874
No 38
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=100.00 E-value=7.9e-76 Score=658.42 Aligned_cols=398 Identities=22% Similarity=0.228 Sum_probs=349.3
Q ss_pred HHHHh-cCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHH
Q 005131 264 ILKVL-QGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAA 342 (713)
Q Consensus 264 l~~~~-tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~ 342 (713)
+.++. +|+.++++...+ .+|+++|+++|++||+.|++++.++|.++|+++++.|++|+++|+.....++|+
T Consensus 18 v~~P~~~~~~i~~~~~~~--------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 89 (473)
T cd07097 18 NRNPSDTSDVVGKYARAS--------AEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGK 89 (473)
T ss_pred eECCCCCCeEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Confidence 34567 488888877664 999999999999999999999999999999999999999999999887777777
Q ss_pred HHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 343 AEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 343 ~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
+..+. ..|+..+++.+++|+. ..+..+..... ...+...+..++|+|||++|+|| ||+.++ ++
T Consensus 90 ~~~~a------------~~ev~~~~~~l~~~a~~~~~~~g~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~ 155 (473)
T cd07097 90 TLPEA------------RGEVTRAGQIFRYYAGEALRLSGETLPS--TRPGVEVETTREPLGVVGLITPWNFPIAIPAWK 155 (473)
T ss_pred CHHHH------------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEEeeeeEEEEcccChHHHHHHHH
Confidence 76442 1588899999999886 33333322211 11345678899999999999999 999885 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
++|||++||+||+|||+.+|.++..+++++.++ |+|+|++|+|+|. .++++.|..||+||+|+||||+++|+.|++
T Consensus 156 i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a---GlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 232 (473)
T cd07097 156 IAPALAYGNTVVFKPAELTPASAWALVEILEEA---GLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAA 232 (473)
T ss_pred HHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHc---CCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999 8999999999984 668899999999999999999999999988
Q ss_pred hc---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-------------
Q 005131 499 ST---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------- 561 (713)
Q Consensus 499 ~~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------- 561 (713)
.+ .+|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|+|||+++||+|+++|+
T Consensus 233 ~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 312 (473)
T cd07097 233 AAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALD 312 (473)
T ss_pred HHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCC
Confidence 64 5999999999999999999999999 667788889999999999999999999999999873
Q ss_pred ---------------------HHHHhCCCEE-EcCCcc-----cccc-C-----C-CCCCCccccccCceEEEEEeCCHH
Q 005131 562 ---------------------DNLRSEGVTL-YGGPRA-----SSLL-N-----I-PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 562 ---------------------~~~~~~Ga~l-~gg~~~-----~~~~-~-----v-~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
++++++|+++ +||... +.|+ + + +++++++||+||||++|++|+|+|
T Consensus 313 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 392 (473)
T cd07097 313 EGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYD 392 (473)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHH
Confidence 4566789998 777542 3344 2 3 689999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCC-CCCCCCccCccceeec-cccCCCcccchHhhceeE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTR-FCDGARFGLGAEVGIS-TSRIHARGPVGVEGLLTT 685 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~g-~~~~~~~g~~~l~~~~~~ 685 (713)
|||+++|+++|||+++|||+|.+++.++++++++|+|+||+++. ..+.+||||+|.||+| + ++|++|+++||+.
T Consensus 393 eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~----~~g~~~l~~f~~~ 468 (473)
T cd07097 393 EALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPR----EQGEAALEFYTTI 468 (473)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCccc----CCcHHHHHHhhce
Confidence 99999999999999999999999999999999999999998754 3468999999999999 8 8899999999999
Q ss_pred EEEEE
Q 005131 686 RWILK 690 (713)
Q Consensus 686 k~v~~ 690 (713)
|+|++
T Consensus 469 k~v~~ 473 (473)
T cd07097 469 KTVYV 473 (473)
T ss_pred eEEeC
Confidence 99863
No 39
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=100.00 E-value=7.8e-76 Score=653.10 Aligned_cols=394 Identities=21% Similarity=0.233 Sum_probs=347.2
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRR--LQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
++.||+.++++...+ .+|+++|++.|++||+. |+. ++.+|+++|++++++|++|+++|+..+.++.|++
T Consensus 3 nP~t~~~i~~~~~~~--------~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 73 (455)
T cd07120 3 DPATGEVIGTYADGG--------VAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKI 73 (455)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 467889999887775 99999999999999984 998 9999999999999999999999998888887777
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIA 420 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~ 420 (713)
..++ ..|+..+++.+++++. ..+..+..... ..+...+..++|+|||++|+|| ||++++ +++
T Consensus 74 ~~~a------------~~Ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~ 138 (455)
T cd07120 74 LGEA------------RFEISGAISELRYYAGLARTEAGRMIEP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSL 138 (455)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceeEEEECCCchHHHHHHHHH
Confidence 6442 1588899999998886 33333332221 1244578899999999999999 999885 999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHH-hccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITE-VIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~-al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
+|||++||+||+|||+.+|.++..+++++++ + |+|+|+||+|+| +.++++.|..||++++|+||||+++|+.|++
T Consensus 139 ~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~aa---g~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 215 (455)
T cd07120 139 APALAAGCTVVVKPAGQTAQINAAIIRILAEIP---SLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMA 215 (455)
T ss_pred HHHHHcCCEEEeECCCCChHHHHHHHHHHHHhc---CCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999 6 899999999997 4668889999999999999999999999988
Q ss_pred hc---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-------------
Q 005131 499 ST---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------- 561 (713)
Q Consensus 499 ~~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------- 561 (713)
.+ .+|+++|+|||||+||++|||+|.| ..+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 216 ~aa~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~ 295 (455)
T cd07120 216 AAAPTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLD 295 (455)
T ss_pred HHHhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCC
Confidence 75 5999999999999999999999999 567778888999999999999999999999999873
Q ss_pred ---------------------HHHHhCCCEE-EcCCc------ccccc-C-----C-CCCCCccccccCceEEEEEeCCH
Q 005131 562 ---------------------DNLRSEGVTL-YGGPR------ASSLL-N-----I-PEPNSFHHEYNSMACTIEIVDDV 606 (713)
Q Consensus 562 ---------------------~~~~~~Ga~l-~gg~~------~~~~~-~-----v-~~~~~~~eE~FgPvl~v~~~~~~ 606 (713)
++++++|+++ +||.. .+.|+ + + ++|++++||+||||++|++|+|+
T Consensus 296 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~ 375 (455)
T cd07120 296 PASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDE 375 (455)
T ss_pred CCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCH
Confidence 3456689988 65542 13444 2 3 68999999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEE
Q 005131 607 HAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 686 (713)
Q Consensus 607 ~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k 686 (713)
||||+++|+++|||+++|||+|.++++++++++++|.|+||+++...+.+||||+|+||+|+ ++|++|+++||++|
T Consensus 376 deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~l~~ft~~k 451 (455)
T cd07120 376 AEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGR----LHGVAALEDFIEYK 451 (455)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCc----cchHHHHHHHhcee
Confidence 99999999999999999999999999999999999999999987777889999999999998 88999999999999
Q ss_pred EEEE
Q 005131 687 WILK 690 (713)
Q Consensus 687 ~v~~ 690 (713)
+|++
T Consensus 452 ~v~~ 455 (455)
T cd07120 452 HIYL 455 (455)
T ss_pred EEeC
Confidence 9863
No 40
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=100.00 E-value=1.4e-75 Score=654.39 Aligned_cols=395 Identities=20% Similarity=0.237 Sum_probs=347.5
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++++|+.++++...+ .+|+++++++|++||+.|+++|+++|.++|+++++.|++++++|+..+.+++|++..
T Consensus 3 ~P~t~~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 74 (456)
T cd07110 3 NPATEATIGEIPAAT--------AEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLD 74 (456)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 467899999887765 999999999999999999999999999999999999999999999888877777664
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcc---ccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPI---GHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~---~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
++ ..|+..+++.+++++. ..+.. ....+. ...+...+..++|+|||++|+|| ||+.++ ++
T Consensus 75 ~a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 140 (456)
T cd07110 75 EA------------AWDVDDVAGCFEYYADLAEQLDAKAERAVPL--PSEDFKARVRREPVGVVGLITPWNFPLLMAAWK 140 (456)
T ss_pred HH------------HHHHHHHHHHHHHHHHHHHHhhccCCccccC--CCCCceeEEEEecceeEEEECCCChHHHHHHHH
Confidence 42 1577788888888776 22221 111111 11355678899999999999999 999985 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
++|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+|. .+.++.|..||++|+|+||||+.+|+.|++
T Consensus 141 ~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~a---GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~ 217 (456)
T cd07110 141 VAPALAAGCTVVLKPSELTSLTELELAEIAAEA---GLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQ 217 (456)
T ss_pred HHHHHHcCCEEEEECcccchHHHHHHHHHHHHc---CCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999974 668899999999999999999999999998
Q ss_pred hc---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-------------
Q 005131 499 ST---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------- 561 (713)
Q Consensus 499 ~~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------- 561 (713)
++ .+|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|+|||+++||+|+++|+
T Consensus 218 ~aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 297 (456)
T cd07110 218 AAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLE 297 (456)
T ss_pred HHhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 75 4999999999999999999999999 567788899999999999999999999999999883
Q ss_pred ---------------------HHHHhCCCEE-EcCCcc-----ccccC------C-CCCCCccccccCceEEEEEeCCHH
Q 005131 562 ---------------------DNLRSEGVTL-YGGPRA-----SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 562 ---------------------~~~~~~Ga~l-~gg~~~-----~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|
T Consensus 298 ~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~ 377 (456)
T cd07110 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATED 377 (456)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHH
Confidence 3456689998 777542 33442 3 678999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
|||+++|+++|||+++|||+|.+++.++++++++|.|+||+++...+.+||||+|.||+|+ ++|++|+++||+.|+
T Consensus 378 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~~~~k~ 453 (456)
T cd07110 378 EAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGR----ELGEWGLDNYLEVKQ 453 (456)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCc----cchHHHHHHhcceeE
Confidence 9999999999999999999999999999999999999999987667789999999999999 889999999999999
Q ss_pred EE
Q 005131 688 IL 689 (713)
Q Consensus 688 v~ 689 (713)
|+
T Consensus 454 i~ 455 (456)
T cd07110 454 IT 455 (456)
T ss_pred Ee
Confidence 86
No 41
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=100.00 E-value=1.4e-75 Score=653.52 Aligned_cols=396 Identities=18% Similarity=0.195 Sum_probs=341.9
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.||+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+..+.+++|++..
T Consensus 2 ~P~tg~~i~~~~~~~--------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ 73 (454)
T cd07101 2 APFTGEPLGELPQST--------PADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARR 73 (454)
T ss_pred cCCCCCEEEEEcCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 467899999877764 999999999999999999999999999999999999999999999988888888765
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAAL 422 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ 422 (713)
++ ..|+..+++.+++++. ..+..+..............+.+++|+|||++|+|| ||+.++ ++++|
T Consensus 74 ~a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ 141 (454)
T cd07101 74 HA------------FEEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIP 141 (454)
T ss_pred HH------------HHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHH
Confidence 42 1567777777777775 222221111100001123567899999999999999 999874 99999
Q ss_pred HHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 423 AIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 423 ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
||++||+||+|||+.+|.++..+.+++.++ |+|+|++|+|+| +.++++.|..| +|.|+||||+.+|+.|++.+
T Consensus 142 ALaaGN~vvlKps~~~p~~~~~l~~~~~~a---glP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa 216 (454)
T cd07101 142 ALLAGNAVVLKPDSQTALTALWAVELLIEA---GLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG 216 (454)
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHHc---CcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHH
Confidence 999999999999999999999999999999 899999999998 46678888876 68999999999999999865
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------------- 561 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------- 561 (713)
.+|+++|||||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 217 ~~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~ 296 (454)
T cd07101 217 RRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGP 296 (454)
T ss_pred hcCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 5999999999999999999999999 667788888999999999999999999999999883
Q ss_pred ------------------HHHHhCCCEE-EcCCcc----ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHH
Q 005131 562 ------------------DNLRSEGVTL-YGGPRA----SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIG 611 (713)
Q Consensus 562 ------------------~~~~~~Ga~l-~gg~~~----~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~ 611 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||+
T Consensus 297 ~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 376 (454)
T cd07101 297 DMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIE 376 (454)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHH
Confidence 3456689988 777531 23442 3 6889999999999999999999999999
Q ss_pred HHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCC---CCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 612 HIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTR---FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 612 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~---~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
++|+++|||++||||+|.+++.++++++++|.||||++.. ..+.+||||+|.||+|+ ++|++|+++||+.|+|
T Consensus 377 ~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~----~~g~~~~~~~~~~k~v 452 (454)
T cd07101 377 LANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGR----RHGAEGLLKYTETQTV 452 (454)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCc----cchHHHHHHhcceEEE
Confidence 9999999999999999999999999999999999998743 34678999999999999 8899999999999998
Q ss_pred EE
Q 005131 689 LK 690 (713)
Q Consensus 689 ~~ 690 (713)
++
T Consensus 453 ~~ 454 (454)
T cd07101 453 AV 454 (454)
T ss_pred eC
Confidence 63
No 42
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-75 Score=656.87 Aligned_cols=399 Identities=15% Similarity=0.180 Sum_probs=349.4
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+|+++++++|++||+.|++++.++|.++|+++++.|++++++|+....+++|++.
T Consensus 22 ~~P~t~~~i~~~~~~~--------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 93 (475)
T PRK13473 22 YNPATGEVLAEIAEAS--------AAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPL 93 (475)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 4567889999887775 99999999999999999999999999999999999999999999987777777665
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+.+ ..|+..+++.+++++. .....+...... ..+...+++|+|+|||++|+|| ||+.++ ++++
T Consensus 94 ~~a~-----------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~ 160 (475)
T PRK13473 94 HLAL-----------NDEIPAIVDVFRFFAGAARCLEGKAAGEY--LEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLA 160 (475)
T ss_pred HHHH-----------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceeEEEEecceeEEEEccCChHHHHHHHHHH
Confidence 3311 1478888999998876 332222211111 1233567899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
|||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 161 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a----lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~a 236 (475)
T PRK13473 161 PALAAGNTVVLKPSEITPLTALKLAELAADI----LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAA 236 (475)
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHHh----CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999988 67779999998 567889999999999999999999999999865
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
++|+++|||||||+||++|||+|.| ..+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 237 a~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~ 316 (475)
T PRK13473 237 ADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDED 316 (475)
T ss_pred hhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 5899999999999999999999999 677788899999999999999999999999999883
Q ss_pred -------------------HHHHhCC-CEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHHH
Q 005131 562 -------------------DNLRSEG-VTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAI 610 (713)
Q Consensus 562 -------------------~~~~~~G-a~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi 610 (713)
+++.++| +++ +||... +.|+. + +++++++||+||||++|++|+|+||||
T Consensus 317 ~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai 396 (475)
T PRK13473 317 TELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAV 396 (475)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHH
Confidence 3556678 888 888653 34542 3 689999999999999999999999999
Q ss_pred HHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 611 GHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 611 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||+|.||+|+ ++|++|+++||+.|+|++
T Consensus 397 ~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~~t~~k~i~~ 472 (475)
T PRK13473 397 RWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGK----DMSLYGLEDYTVVRHVMV 472 (475)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCc----cchHHHHHHHhceEEEEE
Confidence 9999999999999999999999999999999999999987667789999999999999 889999999999999987
Q ss_pred CC
Q 005131 691 GS 692 (713)
Q Consensus 691 ~~ 692 (713)
++
T Consensus 473 ~~ 474 (475)
T PRK13473 473 KH 474 (475)
T ss_pred ec
Confidence 54
No 43
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=100.00 E-value=2.4e-75 Score=650.73 Aligned_cols=392 Identities=20% Similarity=0.227 Sum_probs=347.1
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.||+.++++...+ .+|+++++++|++||+.|++++.++|.++|++++++|++++++|++...+++|++..
T Consensus 3 ~P~tg~~~~~~~~~~--------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 74 (446)
T cd07106 3 NPATGEVFASAPVAS--------EAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLA 74 (446)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 467899999887765 999999999999999999999999999999999999999999999887777777654
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALA 423 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~A 423 (713)
++ ..|+..+++.+++++....+. ..... ..+...+..++|+|||++|+|| ||+.++ ++++||
T Consensus 75 ~a------------~~ev~~~~~~l~~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 138 (446)
T cd07106 75 EA------------QFEVGGAVAWLRYTASLDLPD-EVIED---DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPA 138 (446)
T ss_pred HH------------HHHHHHHHHHHHHHHhhhhcC-ccccC---CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHH
Confidence 31 258889999999988733221 11111 1345678899999999999999 999985 999999
Q ss_pred HHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---
Q 005131 424 IRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST--- 500 (713)
Q Consensus 424 LaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~--- 500 (713)
|++||+||+|||+.+|.++.++++++.++ +|+|++|+|+|+.++++.|..||++|+|+||||+.+|+.|++++
T Consensus 139 LaaGN~VilKps~~~p~~~~~l~~~~~~~----lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~ 214 (446)
T cd07106 139 LLAGNTVVLKPSPFTPLCTLKLGELAQEV----LPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKT 214 (446)
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHHh----CCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999887 67779999998666888999999999999999999999999875
Q ss_pred CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH------------------
Q 005131 501 KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------------ 561 (713)
Q Consensus 501 ~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------------ 561 (713)
.+|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|||||++++|+|+++|+
T Consensus 215 ~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~ 294 (446)
T cd07106 215 LKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTL 294 (446)
T ss_pred CCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 5899999999999999999999999 567778888999999999999999999999999873
Q ss_pred ----------------HHHHhCCCEE-EcCCcc---cccc-C-----C-CCCCCccccccCceEEEEEeCCHHHHHHHHH
Q 005131 562 ----------------DNLRSEGVTL-YGGPRA---SSLL-N-----I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIH 614 (713)
Q Consensus 562 ----------------~~~~~~Ga~l-~gg~~~---~~~~-~-----v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N 614 (713)
+++.++|+++ +||... +.|+ + + ++|++++||+||||++|++|+|+||||+++|
T Consensus 295 gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n 374 (446)
T cd07106 295 GPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARAN 374 (446)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHh
Confidence 3455679988 788642 3444 2 3 7899999999999999999999999999999
Q ss_pred ccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 615 QHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 615 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+++|||++||||+|.+++.++++++++|.|+||+++...+.+||||+|+||+|+ ++|++|+++||+.|+|+
T Consensus 375 ~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 375 DSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGV----EFGIEGLKEYTQTQVIN 445 (446)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccCc----cchHHHHHHhhceeEEe
Confidence 999999999999999999999999999999999988778899999999999999 88999999999999986
No 44
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=100.00 E-value=2e-75 Score=653.18 Aligned_cols=399 Identities=21% Similarity=0.241 Sum_probs=347.9
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++.+...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+.....++|++.
T Consensus 4 ~~P~t~~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 75 (456)
T cd07145 4 RNPANGEVIDTVPSLS--------REEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPI 75 (456)
T ss_pred cCCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 4567888888887764 99999999999999999999999999999999999999999999987777777765
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcccccccccc--ccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQ--LADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
.++ ..|+..+++.++++++ .....++..+... ...+...+++++|+|||++|+|| ||+.++ ++
T Consensus 76 ~~a------------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 143 (456)
T cd07145 76 KQS------------RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHK 143 (456)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHH
Confidence 442 1578888999998876 3222222211110 00234567889999999999999 999985 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
+++||++||+||+|||+.+|.++.++++++.++ |+|+|++|+|+| +.++++.|..||++|+|+||||+++|+.|++
T Consensus 144 ~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~a---g~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~ 220 (456)
T cd07145 144 IAPAIAVGNSVVVKPSSNTPLTAIELAKILEEA---GLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIAS 220 (456)
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHc---CCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999 899999999997 4678889999999999999999999999998
Q ss_pred hc---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-------------
Q 005131 499 ST---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------- 561 (713)
Q Consensus 499 ~~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------- 561 (713)
.+ ++|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 221 ~aa~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 300 (456)
T cd07145 221 KAGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLD 300 (456)
T ss_pred HHhhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCC
Confidence 75 5999999999999999999999999 567778888999999999999999999999999873
Q ss_pred ---------------------HHHHhCCCEE-EcCCcc-ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHH
Q 005131 562 ---------------------DNLRSEGVTL-YGGPRA-SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIG 611 (713)
Q Consensus 562 ---------------------~~~~~~Ga~l-~gg~~~-~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~ 611 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||+
T Consensus 301 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 380 (456)
T cd07145 301 ESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVE 380 (456)
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHH
Confidence 4556679988 787654 44542 2 6899999999999999999999999999
Q ss_pred HHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCC-CCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 612 HIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 612 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
++|+++|||++||||+|.+++.++++++++|+||||+++.. .+.+||||+|+||+|+ ++|++|+++|++.|+|++
T Consensus 381 ~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~----~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 381 IANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGR----EGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCc----CchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999987644 3679999999999999 889999999999999863
No 45
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=100.00 E-value=2.2e-75 Score=652.71 Aligned_cols=399 Identities=22% Similarity=0.277 Sum_probs=349.9
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++++|+.++++...+ .+|+++++++|++||+.|+++|..+|.++|++++++|++++++|++...+++|++.
T Consensus 4 ~~P~t~~~~~~~~~~~--------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 75 (453)
T cd07094 4 HNPYDGEVIGKVPADD--------RADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPI 75 (453)
T ss_pred cCCCCCCEEEEEcCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4577899999887765 99999999999999999999999999999999999999999999988777777766
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccc--cccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKT--QLADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
.+. ..|+..+++.+++++. ..+..++..+.. ....+...+++++|+|||++|+|| ||+.++ ++
T Consensus 76 ~~a------------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~ 143 (453)
T cd07094 76 KDA------------RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHK 143 (453)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHH
Confidence 442 1577788888888776 333222222111 001245677889999999999999 999884 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
+++||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+|+ .++++.|..||++|+|+||||+++|+.|++
T Consensus 144 ~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~a---g~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~ 220 (453)
T cd07094 144 LAPAIATGCPVVLKPASKTPLSALELAKILVEA---GVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRA 220 (453)
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc---CCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999 8999999999974 667899999999999999999999999998
Q ss_pred hc-CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 499 ST-KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 499 ~~-~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
.+ .+|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 221 ~a~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~ 300 (453)
T cd07094 221 NAGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDED 300 (453)
T ss_pred HcCCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 76 5999999999999999999999999 667788888999999999999999999999999883
Q ss_pred -------------------HHHHhCCCEE-EcCCccccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHH
Q 005131 562 -------------------DNLRSEGVTL-YGGPRASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIH 614 (713)
Q Consensus 562 -------------------~~~~~~Ga~l-~gg~~~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N 614 (713)
++++++|+++ +||...+.|+. + ++|++++||+||||++|++|+|+||||+++|
T Consensus 301 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n 380 (453)
T cd07094 301 TDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIAN 380 (453)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHh
Confidence 4456689998 77765555542 3 7899999999999999999999999999999
Q ss_pred ccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCC-CCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 615 QHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 615 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+++|||++||||+|..++.++++++++|+||||+++.. .+.+||||+|+||+|+ ++|++|+++|++.|+|++
T Consensus 381 ~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~----~~g~~~~~~~~~~k~i~~ 453 (453)
T cd07094 381 STDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGR----EGVPYAMEEMTEEKTVVI 453 (453)
T ss_pred CCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCc----CChHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999999998544 5789999999999999 899999999999999863
No 46
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=100.00 E-value=2.2e-75 Score=653.88 Aligned_cols=397 Identities=17% Similarity=0.178 Sum_probs=349.5
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHH-HHh-cCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSR-RLQ-AMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
++.+|+.++++...+ .+|+++|+++|++||+ .|+ ++|.++|.++|+++++.|++++++|+..+.+++|++
T Consensus 28 ~P~t~~~i~~~~~~~--------~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 99 (481)
T cd07143 28 NPSTGKLITKIAEAT--------EADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKT 99 (481)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 466889989887764 9999999999999998 599 999999999999999999999999998888888877
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIA 420 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~ 420 (713)
..+. ...|+..+++.+++++. .....+..... ..+...+.+++|+|||++|+|| ||++++ +++
T Consensus 100 ~~~~-----------~~~ev~~~~~~~~~~a~~a~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 100 FGTA-----------KRVDVQASADTFRYYGGWADKIHGQVIET---DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred hHHH-----------HHHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 6320 01478888899998887 33322332221 1234567899999999999999 999985 999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
+|||++||+||+|||+.+|.++..+.+++.++ |+|+|++|+|+|. .++++.|..||++|+|+||||+++|+.|++.
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~a---GlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~ 242 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEA---GFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEA 242 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhc---CcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHH
Confidence 99999999999999999999999999999999 8999999999974 5788999999999999999999999999875
Q ss_pred c----CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-------------
Q 005131 500 T----KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------- 561 (713)
Q Consensus 500 ~----~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------- 561 (713)
+ .+|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|||||++++|+|+++|+
T Consensus 243 aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 322 (481)
T cd07143 243 AAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFA 322 (481)
T ss_pred HHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCC
Confidence 4 4799999999999999999999999 667888899999999999999999999999999873
Q ss_pred ---------------------HHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHH
Q 005131 562 ---------------------DNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAA 609 (713)
Q Consensus 562 ---------------------~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eA 609 (713)
++++++|+++ +||... +.|+. + +++++++||+||||++|++|+|+|||
T Consensus 323 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea 402 (481)
T cd07143 323 EDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEA 402 (481)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHH
Confidence 4556689998 777643 33442 3 68999999999999999999999999
Q ss_pred HHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 610 IGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 610 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
|+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||+|.||+|+ ++|++|+++||+.|+|+
T Consensus 403 i~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~~t~~k~i~ 478 (481)
T cd07143 403 IKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGR----ELGEYALENYTQIKAVH 478 (481)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCc----ccHHHHHHHHhCeEEEE
Confidence 99999999999999999999999999999999999999987777889999999999998 88999999999999998
Q ss_pred EC
Q 005131 690 KG 691 (713)
Q Consensus 690 ~~ 691 (713)
++
T Consensus 479 ~~ 480 (481)
T cd07143 479 IN 480 (481)
T ss_pred Ee
Confidence 63
No 47
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=100.00 E-value=3.7e-75 Score=654.81 Aligned_cols=397 Identities=19% Similarity=0.245 Sum_probs=348.5
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRR-LQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
++.+|+.++++...+ .+|+++++++|++||+. |+++|.++|.++|+++++.|++++++|+..+.+++|++.
T Consensus 29 ~P~tg~~i~~~~~~~--------~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~ 100 (484)
T cd07144 29 NPSTGEVIASVYAAG--------EEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPY 100 (484)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Confidence 466888888887765 99999999999999996 889999999999999999999999999988888887765
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+. ...|+..+++.+++++. .....+...+. ..+...+..++|+|||++|+|| ||+.++ ++++
T Consensus 101 ~~~-----------~~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~ 166 (484)
T cd07144 101 HSN-----------ALGDLDEIIAVIRYYAGWADKIQGKTIPT---SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLA 166 (484)
T ss_pred HHH-----------HHHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEecceEEEEECcCCCHHHHHHHHHH
Confidence 321 02578888899998886 33333322221 1344568899999999999999 999885 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
|||++||+||+|||+.+|+++..+.+++.++ |+|+|+||+|+| +.++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 167 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~a---glP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a 243 (484)
T cd07144 167 PALAAGNTVVIKPAENTPLSLLYFANLVKEA---GFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA 243 (484)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHHh---CcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999 899999999997 467889999999999999999999999999864
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHH-------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDN------------- 563 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~------------- 563 (713)
++|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|++.
T Consensus 244 ~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~ 323 (484)
T cd07144 244 AQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDD 323 (484)
T ss_pred HhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCC
Confidence 5999999999999999999999999 66788889999999999999999999999999987433
Q ss_pred ----------------------HHhCCCEE-EcCCcc------ccccC------C-CCCCCccccccCceEEEEEeCCHH
Q 005131 564 ----------------------LRSEGVTL-YGGPRA------SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 564 ----------------------~~~~Ga~l-~gg~~~------~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|
T Consensus 324 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 403 (484)
T cd07144 324 DTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYE 403 (484)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHH
Confidence 34468888 777542 33442 3 789999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
|||+++|+++|||++||||+|.+++.++++++++|.|+||+++...+.+||||+|+||+|+ ++|++|+++||+.|+
T Consensus 404 eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~ 479 (484)
T cd07144 404 EAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGR----ELGEYGLETYTQTKA 479 (484)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCC----CchHHHHHHhhceEE
Confidence 9999999999999999999999999999999999999999987777889999999999999 889999999999999
Q ss_pred EEEC
Q 005131 688 ILKG 691 (713)
Q Consensus 688 v~~~ 691 (713)
|+++
T Consensus 480 v~~~ 483 (484)
T cd07144 480 VHIN 483 (484)
T ss_pred EEEe
Confidence 9864
No 48
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=100.00 E-value=2.5e-75 Score=652.25 Aligned_cols=397 Identities=20% Similarity=0.247 Sum_probs=348.8
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.||+.++++...+ .+|+++++++|++||+.|++++.++|.++|+++++.|++++++|++.+..++|++.
T Consensus 4 ~~P~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 75 (451)
T cd07150 4 LNPADGSVYARVAVGS--------RQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTY 75 (451)
T ss_pred cCCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 4567899999987775 89999999999999999999999999999999999999999999988777777665
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++ ..|+..+++.+++++. ..+..+...+.. ..+...+.+++|+|||++|+|| ||++++ ++++
T Consensus 76 ~~a------------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~ 141 (451)
T cd07150 76 GKA------------WFETTFTPELLRAAAGECRRVRGETLPSD--SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVA 141 (451)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecccEEEEECCCccHHHHHHHHHH
Confidence 331 1577888888888876 333333322211 1345667899999999999999 999885 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
+||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+| +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 142 ~ALaaGN~VilKps~~~p~t~~~l~~~~~~a---g~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 218 (451)
T cd07150 142 FALAAGNTVVLKPSEETPVIGLKIAEIMEEA---GLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKA 218 (451)
T ss_pred HHHhcCCeEEEECCccCcHHHHHHHHHHHHh---CCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999 899999999997 467889999999999999999999999998764
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
.+|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|+|||+++||+|+++|+
T Consensus 219 a~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 298 (451)
T cd07150 219 GRHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPD 298 (451)
T ss_pred hhcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 5899999999999999999999999 556777889999999999999999999999999873
Q ss_pred -------------------HHHHhCCCEE-EcCCccccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHH
Q 005131 562 -------------------DNLRSEGVTL-YGGPRASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIH 614 (713)
Q Consensus 562 -------------------~~~~~~Ga~l-~gg~~~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N 614 (713)
++++++|+++ +||...+.|+. + ++|++++||+||||++|++|+|+||||+++|
T Consensus 299 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 378 (451)
T cd07150 299 TVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELAN 378 (451)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHh
Confidence 3556789998 77765555542 3 6789999999999999999999999999999
Q ss_pred ccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCC-CCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 615 QHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 615 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+++|||++||||+|.++++++++++++|.|+||+++... +.+||||+|+||+|+ ++|++|+++||+.|+|++
T Consensus 379 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~----~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 379 DTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGR----EGGEWSMEEFTELKWITV 451 (451)
T ss_pred CCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCc----CCcHHHHHHhheeeEEeC
Confidence 999999999999999999999999999999999986443 679999999999998 889999999999999863
No 49
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=100.00 E-value=4.7e-75 Score=649.62 Aligned_cols=389 Identities=19% Similarity=0.219 Sum_probs=339.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHH
Q 005131 286 PFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISS 365 (713)
Q Consensus 286 ~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~ 365 (713)
+.+.+|+++++++|++||++|++++.++|.++|++++++|++|+++|++++.+|+|++..+ +...|+.....+++.
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~e----a~~~Ev~~~~~~i~~ 78 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFE----TKMTEVLLTVAEIEH 78 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH----HHHHHHHHHHHHHHH
Confidence 3468999999999999999999999999999999999999999999999999999988755 455677777788999
Q ss_pred HHHHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHH
Q 005131 366 LANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNA 443 (713)
Q Consensus 366 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~ 443 (713)
+++.++.|++........ .. .+...+++++|+|||++|+|| ||+.++ +++++||++||+||+|||+.+|.++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~---~~--~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~ 153 (493)
T PTZ00381 79 LLKHLDEYLKPEKVDTVG---VF--GPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSK 153 (493)
T ss_pred HHHHHHHHhCCcccCCcc---cc--CCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHH
Confidence 999998887632211100 00 122467899999999999999 999985 99999999999999999999999999
Q ss_pred HHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCC
Q 005131 444 ILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSA 520 (713)
Q Consensus 444 ~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dA 520 (713)
++++++.++ +|+|++++|+|+.++++.|..|| +|+|+||||+++|+.|++++ ++|+++|||||||+||++||
T Consensus 154 ~l~~ll~~~----lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dA 228 (493)
T PTZ00381 154 LMAKLLTKY----LDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSC 228 (493)
T ss_pred HHHHHHHHh----CCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCC
Confidence 999999886 66779999998766676666677 99999999999999999875 59999999999999999999
Q ss_pred CHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHH-----------------------------H-HhCCC
Q 005131 521 DMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDN-----------------------------L-RSEGV 569 (713)
Q Consensus 521 Dl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~-----------------------------~-~~~Ga 569 (713)
|++.| ..+++++++|+||.|+|++|+|||++++|+|+++|++. . .++|+
T Consensus 229 dl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~~ga 308 (493)
T PTZ00381 229 NLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGG 308 (493)
T ss_pred CHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHhCCC
Confidence 99999 67888889999999999999999999999999988422 2 23577
Q ss_pred EE-EcCCcc--ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc
Q 005131 570 TL-YGGPRA--SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV 639 (713)
Q Consensus 570 ~l-~gg~~~--~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l 639 (713)
++ +||... +.|+. + ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|...+.++++++
T Consensus 309 ~~~~gG~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~ 388 (493)
T PTZ00381 309 KVVYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENT 388 (493)
T ss_pred cEEECCCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhC
Confidence 77 787543 33442 3 78999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEEEcCCC--CCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEECC
Q 005131 640 DSAAVFHNAST--RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGS 692 (713)
Q Consensus 640 ~~G~v~iN~~~--~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 692 (713)
++|.|+||++. ...+.+||||+|.||+|+ ++|.+|+++||+.|+|+.+.
T Consensus 389 ~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~----~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 389 SSGAVVINDCVFHLLNPNLPFGGVGNSGMGA----YHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred CcceEEECCccccccCCCCCCCCcCcccccc----cchHHHHHhccceeEEEEcc
Confidence 99999999874 335789999999999999 88999999999999999874
No 50
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=100.00 E-value=3.4e-75 Score=650.96 Aligned_cols=394 Identities=19% Similarity=0.214 Sum_probs=347.2
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQ-AMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
++.+|+.++++...+ .+|+++++++|++||+.|. ++|.++|.++|+++++.|++++++|+..+.+++|++.
T Consensus 3 ~P~tg~~i~~~~~~~--------~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 74 (454)
T cd07109 3 DPSTGEVFARIARGG--------AADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPL 74 (454)
T ss_pred CCCCCCEEEEEcCCC--------HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCH
Confidence 567899999887765 9999999999999999876 9999999999999999999999999988888887766
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+. ..|+..+++.++++++ ..+..+...+. ..+...+.+++|+|||++|+|| ||++++ ++++
T Consensus 75 ~~a------------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~ 139 (454)
T cd07109 75 TQA------------RADVEAAARYFEYYGGAADKLHGETIPL---GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVA 139 (454)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHH
Confidence 442 1588888999998876 33322222211 1345678899999999999999 999885 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
+||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+| +.+.++.|..||++|+|+||||+++|+.|++.+
T Consensus 140 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a---GlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 216 (454)
T cd07109 140 PALAAGNAVVVKPAEDAPLTALRLAELAEEA---GLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAA 216 (454)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHHc---CcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999999 899999999997 567888888999999999999999999999865
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
++|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 217 a~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~ 296 (454)
T cd07109 217 AENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDP 296 (454)
T ss_pred hhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccC
Confidence 6999999999999999999999999 567778888999999999999999999999999884
Q ss_pred ------------------HHHHhCCCEE-EcCCcc------ccccC------C-CCCCCccccccCceEEEEEeCCHHHH
Q 005131 562 ------------------DNLRSEGVTL-YGGPRA------SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAA 609 (713)
Q Consensus 562 ------------------~~~~~~Ga~l-~gg~~~------~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eA 609 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|||
T Consensus 297 ~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deA 376 (454)
T cd07109 297 DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEA 376 (454)
T ss_pred cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHH
Confidence 3355679998 676531 33442 3 68999999999999999999999999
Q ss_pred HHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCC-CCCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 610 IGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 610 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
|+++|+++|||+++|||+|.+++.++++++++|.|+||++. ...+.+||||+|.||+|+ ++|++|+++|++.|+|
T Consensus 377 i~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~f~~~k~i 452 (454)
T cd07109 377 IALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGR----EKGLEALYNYTQTKTV 452 (454)
T ss_pred HHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCc----cchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999986 556789999999999999 8899999999999998
Q ss_pred E
Q 005131 689 L 689 (713)
Q Consensus 689 ~ 689 (713)
+
T Consensus 453 ~ 453 (454)
T cd07109 453 A 453 (454)
T ss_pred e
Confidence 6
No 51
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=100.00 E-value=4.1e-75 Score=653.41 Aligned_cols=397 Identities=18% Similarity=0.204 Sum_probs=348.3
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSR---RLQAMSSEDRKKILLDIADALEANEELIIEENEADVA 341 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~ 341 (713)
.++.+|+.++++...+ .+++++++++|++||+ .|+++|.++|.++|+++++.|++++++|++...+++|
T Consensus 27 ~~P~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G 98 (481)
T cd07141 27 INPATGEKICEVQEGD--------KADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNG 98 (481)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Confidence 3467889999877764 9999999999999998 6999999999999999999999999999987777777
Q ss_pred HHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-H
Q 005131 342 AAEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-Q 418 (713)
Q Consensus 342 ~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~ 418 (713)
++..+. ...|+..+++.+++++. .....+...+. ..+...+.+++|+|||++|+|| ||+.++ +
T Consensus 99 k~~~~~-----------~~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 164 (481)
T cd07141 99 KPFSKS-----------YLVDLPGAIKVLRYYAGWADKIHGKTIPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAW 164 (481)
T ss_pred CchHHH-----------HHHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEeceeEEEEEccChhHHHHHHH
Confidence 665221 01478888888988876 33333322211 1234567899999999999999 999984 9
Q ss_pred HHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHH
Q 005131 419 IAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIK 497 (713)
Q Consensus 419 ~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 497 (713)
++++||++||+||+|||+.+|+++..+++++.++ |+|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|+
T Consensus 165 ~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a---GlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~ 241 (481)
T cd07141 165 KLAPALACGNTVVLKPAEQTPLTALYLASLIKEA---GFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241 (481)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHc---CcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999 899999999997 456789999999999999999999999997
Q ss_pred Hhc----CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-----------
Q 005131 498 EST----KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI----------- 561 (713)
Q Consensus 498 ~~~----~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~----------- 561 (713)
+.+ .+|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 242 ~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 321 (481)
T cd07141 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNP 321 (481)
T ss_pred HHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 753 4899999999999999999999999 567778889999999999999999999999999872
Q ss_pred -----------------------HHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHH
Q 005131 562 -----------------------DNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 562 -----------------------~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|
T Consensus 322 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 401 (481)
T cd07141 322 FDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTID 401 (481)
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHH
Confidence 4667789998 888652 33442 3 689999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
|||+++|+++|||++||||+|.+++.++++++++|.||||+++...+.+||||+|.||+|+ ++|++|+++||+.|+
T Consensus 402 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~ 477 (481)
T cd07141 402 EVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGR----ELGEYGLQEYTEVKT 477 (481)
T ss_pred HHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCc----cchHHHHHHHhheEE
Confidence 9999999999999999999999999999999999999999987777889999999999999 889999999999999
Q ss_pred EEE
Q 005131 688 ILK 690 (713)
Q Consensus 688 v~~ 690 (713)
|++
T Consensus 478 v~~ 480 (481)
T cd07141 478 VTI 480 (481)
T ss_pred EEE
Confidence 975
No 52
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=6.1e-75 Score=651.99 Aligned_cols=401 Identities=17% Similarity=0.188 Sum_probs=347.3
Q ss_pred HHHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 264 ILKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 264 l~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
+.++.+|+.++.+...+ .+|+++++++|++||++|++++..+|.++|+++++.|++++++|+..+.+++|++
T Consensus 35 ~~~P~t~~~i~~~~~a~--------~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~ 106 (496)
T PLN00412 35 ITNPSTRKTQYKVQACT--------QEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP 106 (496)
T ss_pred eECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 34567888888776664 9999999999999999999999999999999999999999999998888888887
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcc--ccccccccc---cCCceeeeeeccceeEEEEecC-CchHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPI--GHILKKTQL---ADGLFLEKTSCPLGVLLIVFES-RPDAL 416 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~--~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~-~P~~~ 416 (713)
..++ ..|+..+++.+++++. ..+.. +........ ..+...+++|+|+|||++|+|| ||+.+
T Consensus 107 ~~~a------------~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 174 (496)
T PLN00412 107 AKDA------------VTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNL 174 (496)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHH
Confidence 6542 1567777777777764 22211 111111000 1123456889999999999999 99988
Q ss_pred H-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHH
Q 005131 417 V-QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVS 494 (713)
Q Consensus 417 ~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~ 494 (713)
+ ++++|||++||+||+|||+.+|.++..+++++.++ |+|+|++|+|+|. .+++++|..||+||+|+|||| .+|+
T Consensus 175 ~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~a---glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~ 250 (496)
T PLN00412 175 AVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLA---GFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGI 250 (496)
T ss_pred HHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh---CCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHH
Confidence 5 99999999999999999999999999999999999 8999999999974 678999999999999999999 9999
Q ss_pred HHHHhc-CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-----------
Q 005131 495 QIKEST-KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI----------- 561 (713)
Q Consensus 495 ~i~~~~-~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~----------- 561 (713)
.|++.+ .+|+++|||||||+||++|||++.| ..+++++++|+||.|++++|+|||+++||+|+++|+
T Consensus 251 ~v~~~a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 330 (496)
T PLN00412 251 AISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP 330 (496)
T ss_pred HHHHHhCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCC
Confidence 999875 6999999999999999999999999 667888899999999999999999999999999772
Q ss_pred ----------------------HHHHhCCCEE-EcCCccccccC------C-CCCCCccccccCceEEEEEeCCHHHHHH
Q 005131 562 ----------------------DNLRSEGVTL-YGGPRASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIG 611 (713)
Q Consensus 562 ----------------------~~~~~~Ga~l-~gg~~~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~ 611 (713)
++++++|+++ +||...+.|+. + ++|++++||+||||++|++|+|+||||+
T Consensus 331 ~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~ 410 (496)
T PLN00412 331 EDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIH 410 (496)
T ss_pred cccCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHH
Confidence 4566789998 65544455542 3 7899999999999999999999999999
Q ss_pred HHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCC-CCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 612 HIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 612 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
++|+++|||++||||+|.+++.++++++++|+|+||+++ ...+.+||||+|.||+|+ ++|++|+++||+.|++++
T Consensus 411 ~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~i~~ 486 (496)
T PLN00412 411 HCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGS----QGITNSINMMTKVKSTVI 486 (496)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCC----CChHHHHHHhcceEEEEE
Confidence 999999999999999999999999999999999999985 344689999999999999 889999999999999988
Q ss_pred CC
Q 005131 691 GS 692 (713)
Q Consensus 691 ~~ 692 (713)
+.
T Consensus 487 ~~ 488 (496)
T PLN00412 487 NL 488 (496)
T ss_pred ec
Confidence 64
No 53
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=100.00 E-value=7e-75 Score=648.93 Aligned_cols=397 Identities=18% Similarity=0.184 Sum_probs=345.3
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.+++.++++...+ .+|+++|+++|++|| ++++..+|+++|++++++|++++++|+....+++|++..
T Consensus 23 ~P~t~~~i~~~~~~~--------~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~ 91 (472)
T TIGR03250 23 YPYNGTVVGTVPKAS--------VDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKK 91 (472)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 466888888887764 999999999999876 478999999999999999999999999877777777664
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcccccccccc--ccCCceeeeeeccc-eeEEEEecC-CchHHH-HH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQ--LADGLFLEKTSCPL-GVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~--~~~~~~~~~~~~P~-GVv~~I~p~-~P~~~~-~~ 419 (713)
++ ..|+..+++.+++++. ..+..+....... ...+...++.++|+ |||++|+|| ||++++ ++
T Consensus 92 ~a------------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~ 159 (472)
T TIGR03250 92 DS------------LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHK 159 (472)
T ss_pred HH------------HHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHH
Confidence 42 2688899999999987 4333333221110 11234568899998 999999999 999885 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
++|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+|. .++++.|..||++|+|+||||+.+|+.|++
T Consensus 160 ~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a---GlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 236 (472)
T TIGR03250 160 IAPAIATNNRMVVKPSEKTPLSALYLADILYEA---GLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAA 236 (472)
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc---CCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999 8999999999974 678888888999999999999999999998
Q ss_pred hc-CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH----------------
Q 005131 499 ST-KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL---------------- 560 (713)
Q Consensus 499 ~~-~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l---------------- 560 (713)
.+ .+|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|+|||+++||+|+++|
T Consensus 237 ~a~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 316 (472)
T TIGR03250 237 RAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPS 316 (472)
T ss_pred HhcCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 65 5999999999999999999999999 56777788899999999999999999999999987
Q ss_pred ------------------HHHHHhCCCEE-EcCCccccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHH
Q 005131 561 ------------------IDNLRSEGVTL-YGGPRASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIH 614 (713)
Q Consensus 561 ------------------~~~~~~~Ga~l-~gg~~~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N 614 (713)
+++++++|+++ +||...+.|+. + ++|++++||+||||++|++|+|+||||+++|
T Consensus 317 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN 396 (472)
T TIGR03250 317 VDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISN 396 (472)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHh
Confidence 25677889998 78765566653 3 7899999999999999999999999999999
Q ss_pred ccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCC-CCCCccCccceeeccccCCCcccchHhhceeEEEEEEC
Q 005131 615 QHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKG 691 (713)
Q Consensus 615 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~ 691 (713)
+++|||++||||+|.+++.++++++++|+||||+.+... +.+||||+|+||+|+. ++|++|+++||+.|+|+++
T Consensus 397 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~---~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 397 STAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYK---EGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred CCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCC---CChHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999875443 5699999999999941 6779999999999999875
No 54
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=100.00 E-value=4.7e-75 Score=654.13 Aligned_cols=398 Identities=21% Similarity=0.240 Sum_probs=351.1
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSR--RLQAMSSEDRKKILLDIADALEANEELIIEENEADVAA 342 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~ 342 (713)
.++.+|+.++++...+ .+|+++++++|++||+ .|+++|..+|.++|+++++.|++++++|+....+++|+
T Consensus 18 ~~P~tg~~i~~~~~~~--------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk 89 (482)
T cd07119 18 INPANGEVIATVPEGT--------AEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGK 89 (482)
T ss_pred eCCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Confidence 3566888888887664 8999999999999997 69999999999999999999999999999888777777
Q ss_pred HHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 343 AEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 343 ~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
+..++ ..|+..+++.+++++. ..++.++.... ..+...+++++|+|||++|+|| ||++++ ++
T Consensus 90 ~~~~a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~ 154 (482)
T cd07119 90 TLRES------------EIDIDDVANCFRYYAGLATKETGEVYDV---PPHVISRTVREPVGVCGLITPWNYPLLQAAWK 154 (482)
T ss_pred CHHHH------------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeeeeeEEEEcCCchHHHHHHHH
Confidence 65442 1578888899998887 33343333221 1345678899999999999999 999985 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
++|||++||+||+|||+.+|.++..++++|.++ |+|+|+||+|+|. .++++.|..||++|+|+||||+++|+.|++
T Consensus 155 ~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~a---GlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~ 231 (482)
T cd07119 155 LAPALAAGNTVVIKPSEVTPLTTIALFELIEEA---GLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMR 231 (482)
T ss_pred HHHHHhcCCEEEEECCccccHHHHHHHHHHHHc---CCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999 8999999999974 558899999999999999999999999998
Q ss_pred hc---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-------------
Q 005131 499 ST---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------- 561 (713)
Q Consensus 499 ~~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------- 561 (713)
++ .+|+++|||||||+||++|||++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 232 ~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~ 311 (482)
T cd07119 232 AAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLD 311 (482)
T ss_pred HHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 64 5999999999999999999999999 667788888999999999999999999999999873
Q ss_pred ---------------------HHHHhCCCEE-EcCCcc-------ccccC------C-CCCCCccccccCceEEEEEeCC
Q 005131 562 ---------------------DNLRSEGVTL-YGGPRA-------SSLLN------I-PEPNSFHHEYNSMACTIEIVDD 605 (713)
Q Consensus 562 ---------------------~~~~~~Ga~l-~gg~~~-------~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~ 605 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|
T Consensus 312 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 391 (482)
T cd07119 312 ADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDT 391 (482)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCC
Confidence 4556689998 787542 33442 3 7899999999999999999999
Q ss_pred HHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeE
Q 005131 606 VHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 685 (713)
Q Consensus 606 ~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~ 685 (713)
+||||+++|+++|||++||||+|.+++.++++++++|.|+||++....+.+||||+|+||+|+ ++|++|+++||+.
T Consensus 392 ~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~~t~~ 467 (482)
T cd07119 392 EEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGR----ELGPTGLEEYQET 467 (482)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCc----cchHHHHHHHhce
Confidence 999999999999999999999999999999999999999999986667789999999999999 8899999999999
Q ss_pred EEEEECC
Q 005131 686 RWILKGS 692 (713)
Q Consensus 686 k~v~~~~ 692 (713)
|+|+++.
T Consensus 468 k~v~~~~ 474 (482)
T cd07119 468 KHININL 474 (482)
T ss_pred EEEEEec
Confidence 9999865
No 55
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=100.00 E-value=5.3e-75 Score=647.94 Aligned_cols=395 Identities=21% Similarity=0.258 Sum_probs=348.1
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRR--LQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
++.+++.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++++++|+..+.+++|++
T Consensus 3 ~P~t~~~i~~~~~~~--------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~ 74 (454)
T cd07118 3 SPAHGVVVARYAEGT--------VEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKP 74 (454)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 356889999988775 99999999999999985 99999999999999999999999999998777777776
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIA 420 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~ 420 (713)
..++ ..|++.+++.+++++. ..+..+...+. ...+...++.++|+|||++|+|| ||+.++ +++
T Consensus 75 ~~~a------------~~ev~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i 140 (454)
T cd07118 75 ISQA------------RGEIEGAADLWRYAASLARTLHGDSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKL 140 (454)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHH
Confidence 6442 2688889999998876 23322222211 11234567899999999999999 999985 999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
++||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+|+ .++++.|..||++|+|+||||+++|+.|++.
T Consensus 141 ~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~a---G~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 217 (454)
T cd07118 141 PFALAAGCTVVVKPSEFTSGTTLMLAELLIEA---GLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAA 217 (454)
T ss_pred HHHHhcCCEEEEECCCCCcHHHHHHHHHHHhc---CCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999 8999999999974 5688999999999999999999999999986
Q ss_pred c---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH--------------
Q 005131 500 T---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-------------- 561 (713)
Q Consensus 500 ~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-------------- 561 (713)
+ .+|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|||||++++|+|+++|+
T Consensus 218 aa~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~ 297 (454)
T cd07118 218 AARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDP 297 (454)
T ss_pred HHhcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCC
Confidence 4 5999999999999999999999999 567778888999999999999999999999999873
Q ss_pred --------------------HHHHhCCCEE-EcCCcc----ccccC------C-CCCCCccccccCceEEEEEeCCHHHH
Q 005131 562 --------------------DNLRSEGVTL-YGGPRA----SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAA 609 (713)
Q Consensus 562 --------------------~~~~~~Ga~l-~gg~~~----~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eA 609 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|||
T Consensus 298 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea 377 (454)
T cd07118 298 ETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEA 377 (454)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHH
Confidence 3456789988 787642 34442 3 68899999999999999999999999
Q ss_pred HHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 610 IGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 610 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
|+++|+++|||++||||+|.+++.++++++++|.|+||++....+.+||||+|.||+|+ ++|++|+++||++|+++
T Consensus 378 i~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~----~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 378 IALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGR----ELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCc----CchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999999987777889999999999998 88999999999999986
No 56
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=100.00 E-value=8.3e-75 Score=647.26 Aligned_cols=399 Identities=21% Similarity=0.205 Sum_probs=348.0
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQ-AMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
++.+|+.++.+...+ .+|+++++++|++||+.|+ ++|..+|.++|++++++|++++++|+.....++|++.
T Consensus 3 ~P~tg~~i~~~~~~~--------~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 74 (459)
T cd07089 3 NPATEEVIGTAPDAG--------AADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPV 74 (459)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 467889988876664 9999999999999999999 9999999999999999999999999988888887776
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccc-ccccc-ccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHI-LKKTQ-LADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~-~~~~~-~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
.+.. ..|+..+++.+++++. ..+..+.. .+... ...+...+++++|+|||++|+|| ||+.++ ++
T Consensus 75 ~~~~-----------~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~ 143 (459)
T cd07089 75 MTAR-----------AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAK 143 (459)
T ss_pred HHHH-----------HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHH
Confidence 3210 1477788888888876 33222221 11100 01244678899999999999999 999985 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
++|||++||+||+|||+.+|.++..+.++|.++ |+|+|+||+|+|. +++++.|..||++++|+||||+.+|+.|++
T Consensus 144 ~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~a---glP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~ 220 (459)
T cd07089 144 LAPALAAGNTVVLKPAPDTPLSALLLGEIIAET---DLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMA 220 (459)
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHc---CCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999998 8999999999984 557899999999999999999999999998
Q ss_pred hc---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-------------
Q 005131 499 ST---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------- 561 (713)
Q Consensus 499 ~~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------- 561 (713)
.+ ++|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|||||++++|+|+++|+
T Consensus 221 ~aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~ 300 (459)
T cd07089 221 QAAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPAD 300 (459)
T ss_pred HHHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 75 5999999999999999999999999 667778888999999999999999999999999872
Q ss_pred ---------------------HHHHhCCCEE-EcCCcc-----ccccC------C-CCCCCccccccCceEEEEEeCCHH
Q 005131 562 ---------------------DNLRSEGVTL-YGGPRA-----SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 562 ---------------------~~~~~~Ga~l-~gg~~~-----~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|
T Consensus 301 ~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 380 (459)
T cd07089 301 PGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDD 380 (459)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHH
Confidence 4566789998 777542 33442 3 688999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
|||+++|+++|||++||||+|.+++.++++++++|.|+||++....+.+||||+|+||+|+ ++|++|+++||+.|+
T Consensus 381 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~----~~g~~~l~~ft~~k~ 456 (459)
T cd07089 381 EAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGR----ENGIEGLEEFLETKS 456 (459)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCC----CchHHHHHHhhceeE
Confidence 9999999999999999999999999999999999999999988777889999999999999 889999999999999
Q ss_pred EEE
Q 005131 688 ILK 690 (713)
Q Consensus 688 v~~ 690 (713)
|++
T Consensus 457 v~~ 459 (459)
T cd07089 457 IAY 459 (459)
T ss_pred EeC
Confidence 874
No 57
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=2e-74 Score=647.70 Aligned_cols=397 Identities=18% Similarity=0.161 Sum_probs=342.3
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.||+.++++...+ .+|+++++++|++||+.|+++|..+|.++|++++++|++++++|++....++|++.
T Consensus 20 ~~P~t~~~i~~~~~a~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 91 (487)
T PRK09457 20 RNPVSGEVLWQGNDAT--------AAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPL 91 (487)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH
Confidence 4567899998887664 99999999999999999999999999999999999999999999988878777776
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+. ..|+..+++.+++++. ..+..+..... ..+...+++++|+|||++|+|| ||+.++ ++++
T Consensus 92 ~~a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 156 (487)
T PRK09457 92 WEA------------ATEVTAMINKIAISIQAYHERTGEKRSE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIV 156 (487)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHHH
Confidence 442 1467777777776665 22222222111 1234567889999999999999 999885 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+|+.++++.|..||+||+|+||||+++|+.|++++
T Consensus 157 ~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~a---GlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 233 (487)
T PRK09457 157 PALLAGNTVVFKPSELTPWVAELTVKLWQQA---GLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFA 233 (487)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHHh---CcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 899999999998767889999999999999999999999999863
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCc-hhHHHHHH--------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLV-PTGFNELI-------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~-d~fi~~l~-------------- 561 (713)
.++++||||||||+||++|||++.| ..+++++|+|+||.|++++|||||+++| |+|+++|+
T Consensus 234 ~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~ 313 (487)
T PRK09457 234 GQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAE 313 (487)
T ss_pred hcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcC
Confidence 3678999999999999999999999 5677888899999999999999999998 99999873
Q ss_pred ---------------------HHHHhCCCEE-EcCCc---ccccc-----CC-CCCCCccccccCceEEEEEeCCHHHHH
Q 005131 562 ---------------------DNLRSEGVTL-YGGPR---ASSLL-----NI-PEPNSFHHEYNSMACTIEIVDDVHAAI 610 (713)
Q Consensus 562 ---------------------~~~~~~Ga~l-~gg~~---~~~~~-----~v-~~~~~~~eE~FgPvl~v~~~~~~~eAi 610 (713)
++++++|+++ +||.. .+.|+ .+ ++|++++||+||||++|++|+|+||||
T Consensus 314 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai 393 (487)
T PRK09457 314 PQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEAI 393 (487)
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHHH
Confidence 3455679987 66643 13454 23 689999999999999999999999999
Q ss_pred HHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCC-CCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 611 GHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 611 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+++|+++|||+++|||+|.++++++++++++|+|+||++. ...+.+||||+|.||+|+ ++|. ...+||+.|+++
T Consensus 394 ~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~----~~g~-~~~~~~~~k~~~ 468 (487)
T PRK09457 394 RLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHR----PSAY-YAADYCAYPMAS 468 (487)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCC----CCch-hHhhheeeeEEE
Confidence 9999999999999999999999999999999999999874 344679999999999999 8884 446699999998
Q ss_pred ECC
Q 005131 690 KGS 692 (713)
Q Consensus 690 ~~~ 692 (713)
+..
T Consensus 469 ~~~ 471 (487)
T PRK09457 469 LES 471 (487)
T ss_pred Eec
Confidence 875
No 58
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.3e-74 Score=646.06 Aligned_cols=397 Identities=19% Similarity=0.218 Sum_probs=350.0
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|+....+++|++..
T Consensus 3 ~P~t~~~i~~~~~~~--------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~ 74 (453)
T cd07115 3 NPATGELIARVAQAS--------AEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIR 74 (453)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 456888888877664 999999999999999999999999999999999999999999999888888887765
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAAL 422 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ 422 (713)
+.. ..|+..+++.+++++. ..+..+...+. ..+...+.+++|+|||++|+|| ||+.++ +++++
T Consensus 75 ~~~-----------~~ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ 140 (453)
T cd07115 75 AAR-----------RLDVPRAADTFRYYAGWADKIEGEVIPV---RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAP 140 (453)
T ss_pred HHH-----------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHH
Confidence 421 1377788888888876 33322322211 2345678899999999999999 999985 99999
Q ss_pred HHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 423 AIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 423 ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
||++||+||+|||+.+|.++..+.+++.++ |+|+|++|+|+|+ .++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 141 ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~a---GlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa 217 (453)
T cd07115 141 ALAAGNTVVLKPAELTPLSALRIAELMAEA---GFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAA 217 (453)
T ss_pred HHhcCCEEEEECCCCCcHHHHHHHHHHHhc---CcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999999999999999 8999999999974 56889999999999999999999999999864
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------------- 561 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------- 561 (713)
.+|+++|||||||+||++|||++.| ..+++++++|+||.|++++|||||++++|+|+++|+
T Consensus 218 ~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 297 (453)
T cd07115 218 GNLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKT 297 (453)
T ss_pred hcCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCC
Confidence 5999999999999999999999999 667788889999999999999999999999999884
Q ss_pred ------------------HHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005131 562 ------------------DNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGH 612 (713)
Q Consensus 562 ------------------~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~ 612 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||++
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07115 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRI 377 (453)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHH
Confidence 3445679988 787643 34542 3 58899999999999999999999999999
Q ss_pred HHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEEC
Q 005131 613 IHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKG 691 (713)
Q Consensus 613 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~ 691 (713)
+|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||+|+||+|+ ++|++|+++|++.|+|+++
T Consensus 378 ~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 378 ANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGR----EMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCc----CchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999987778889999999999999 8899999999999999763
No 59
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=100.00 E-value=7.5e-75 Score=649.96 Aligned_cols=393 Identities=18% Similarity=0.218 Sum_probs=346.4
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++.+...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+..+.+++|++.
T Consensus 18 ~nP~t~~~i~~~~~~~--------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 89 (467)
T TIGR01804 18 INPANQEVIATVAEAT--------REDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTL 89 (467)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4567888888876664 99999999999999999999999999999999999999999999988888888776
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+++ ..|+..+++.+++++. .....+...+.. .....+..++|+|||++|+|| ||+.++ ++++
T Consensus 90 ~~a~-----------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 155 (467)
T TIGR01804 90 EETS-----------VADMDDIADVFEFFAGLADKDGGEIIPLP---IPSFSYTIREPLGVCVGIGAWNYPLQIASWKIA 155 (467)
T ss_pred HHHh-----------HHHHHHHHHHHHHHHHHHHHhCCccccCC---CCceEEEEEeeeeEEEEECCCchHHHHHHHHHH
Confidence 5421 1578888999998887 333333222111 123467899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
|||++||+||+|||+.+|.++..++++|.++ |+|+|++|+|+|+ .++++.|..||+||+|+||||+++|++|++.+
T Consensus 156 ~ALaaGN~VvlKps~~tp~~~~~l~~~~~~a---glP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a 232 (467)
T TIGR01804 156 PALAAGNAMVFKPSEITPLTALKVAELMEEA---GLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAA 232 (467)
T ss_pred HHHhcCCEEEeeCCccCcHHHHHHHHHHHHc---CcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999 8999999999975 67889999999999999999999999999875
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
+||+++|+|||||+||++|||++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 233 ~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 312 (467)
T TIGR01804 233 ADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEA 312 (467)
T ss_pred HhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 5999999999999999999999999 567788888999999999999999999999999873
Q ss_pred -------------------HHHHhCCCEE-EcCCcc-------ccccC------C-CCCCCccccccCceEEEEEeCCHH
Q 005131 562 -------------------DNLRSEGVTL-YGGPRA-------SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 562 -------------------~~~~~~Ga~l-~gg~~~-------~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 392 (467)
T TIGR01804 313 TEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSED 392 (467)
T ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHH
Confidence 3456679998 787532 33442 3 789999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 686 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k 686 (713)
|||+++|+++|||+++|||+|..++.++++++++|+|+||+++...+.+||||+|+||+|+ ++|++|+++||+.|
T Consensus 393 eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 393 EVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGR----ENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCC----CChHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999987667789999999999999 88999999999875
No 60
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=100.00 E-value=2.2e-74 Score=651.19 Aligned_cols=426 Identities=20% Similarity=0.216 Sum_probs=360.1
Q ss_pred CchHHHHHHHHHHHHcCCc----EEEEeCC-----CchhHHHHhc-CCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHH
Q 005131 234 GGMTAKVKAAVNAAYAGIP----VVITSGY-----SDENILKVLQ-GERIGTLFHQDAHILDPFNEVGAREMAVAARESS 303 (713)
Q Consensus 234 g~m~~Kl~aa~~a~~~gv~----v~I~~g~-----~~~~l~~~~t-ge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~ 303 (713)
+-++.+++.+..-++...+ .+| +|. ..-.+.++.+ |+.++++...+ .+|+++++++|++||
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~i-~g~~~~~~~~~~v~~P~t~~~~i~~~~~a~--------~~~v~~av~~A~~A~ 82 (512)
T cd07124 12 EENRAAFRAALARVREELGREYPLVI-GGKEVRTEEKIESRNPADPSEVLGTVQKAT--------KEEAEAAVQAARAAF 82 (512)
T ss_pred HHHHHHHHHHHHHHHhhcccccceeE-CCEEecCCCeEEeECCCCCCceEEEEeCCC--------HHHHHHHHHHHHHHH
Confidence 4566677777665554422 333 332 1123457776 88888877664 999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcccc
Q 005131 304 RRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGH 382 (713)
Q Consensus 304 ~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~ 382 (713)
+.|+++|.++|.++|++++++|++++++|+.....++|++..++ ..|+..+++.+++++. ..+..+.
T Consensus 83 ~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea------------~~ev~~~i~~~~~~~~~~~~~~~~ 150 (512)
T cd07124 83 PTWRRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEA------------DADVAEAIDFLEYYAREMLRLRGF 150 (512)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHHHH------------HHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999988888877776542 1578888888888876 3333222
Q ss_pred ccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCC
Q 005131 383 ILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGER 460 (713)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g 460 (713)
..+. ..+...+.+++|+|||++|+|| ||++++ ++++|||++||+||+|||+.+|+++..+++++.++ |+|+|
T Consensus 151 ~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a---GlP~g 224 (512)
T cd07124 151 PVEM---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEA---GLPPG 224 (512)
T ss_pred cccC---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHh---CcCCC
Confidence 2221 1244578899999999999999 999985 99999999999999999999999999999999999 89999
Q ss_pred eEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---------CCCeEEecCccceEEEcCCCCHHHH-HHHH
Q 005131 461 LIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---------KIPVLGHADGICHIYVDKSADMDMA-KQIV 529 (713)
Q Consensus 461 ~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---------~~~v~lElgG~~p~iV~~dADl~~A-~~~~ 529 (713)
+||+|+| +.++++.|..||++|+|+||||+.+|+.|++.+ ++|+++|||||||+||++|||++.| ..++
T Consensus 225 vv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~ 304 (512)
T cd07124 225 VVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIV 304 (512)
T ss_pred ceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHH
Confidence 9999997 467889999999999999999999999999753 5799999999999999999999999 5677
Q ss_pred HHccCCCCCccccCceEEEcCCCchhHHHHHH----------------------------------HHHHhCCCEE-EcC
Q 005131 530 LDAKVDYPAACNAMETLLIHQDLVPTGFNELI----------------------------------DNLRSEGVTL-YGG 574 (713)
Q Consensus 530 ~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~----------------------------------~~~~~~Ga~l-~gg 574 (713)
+++|.|+||.|++++|||||+++||+|+++|+ +++++ |+++ +||
T Consensus 305 ~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG 383 (512)
T cd07124 305 RSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGG 383 (512)
T ss_pred HHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecC
Confidence 77888999999999999999999999999883 33344 7788 777
Q ss_pred Ccc-----cccc-C-----C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCee
Q 005131 575 PRA-----SSLL-N-----I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSA 642 (713)
Q Consensus 575 ~~~-----~~~~-~-----v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G 642 (713)
... +.|+ + + ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|
T Consensus 384 ~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G 463 (512)
T cd07124 384 EVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVG 463 (512)
T ss_pred ccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcc
Confidence 542 3344 2 3 68999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCCCC-C-CCCCCccCccceeec-cccCCCcccchHhhceeEEEEEEC
Q 005131 643 AVFHNASTR-F-CDGARFGLGAEVGIS-TSRIHARGPVGVEGLLTTRWILKG 691 (713)
Q Consensus 643 ~v~iN~~~~-~-~~~~pfGG~k~SG~g-~~~~~~~g~~~l~~~~~~k~v~~~ 691 (713)
+||||+++. . .+.+||||+|+||+| + ++|++|+++||++|+|+++
T Consensus 464 ~v~vN~~~~~~~~~~~PfGG~k~SG~G~~----~~g~~~~~~~t~~k~v~~~ 511 (512)
T cd07124 464 NLYANRKITGALVGRQPFGGFKMSGTGSK----AGGPDYLLQFMQPKTVTEN 511 (512)
T ss_pred eEEECCCCCCCCCCCCCCCccccccCCCc----cCcHHHHHHhccEEEEEEe
Confidence 999998743 2 357999999999999 6 7899999999999999875
No 61
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.9e-74 Score=645.32 Aligned_cols=395 Identities=21% Similarity=0.229 Sum_probs=345.7
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.+|+.++++...+ .+|+++++++|++||+.|++++.++|.++|+++++.|++++++|++....++|++..
T Consensus 2 ~P~t~~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 73 (452)
T cd07102 2 SPIDGSVIAERPLAS--------LEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIA 73 (452)
T ss_pred CCCCCCEEEEEcCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHH
Confidence 456889888877664 899999999999999999999999999999999999999999999877777776654
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHH-HHHHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDAL-VQIAAL 422 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~~~~~ 422 (713)
+. ..|+...++.+++++. ..+..+..... ...+...+.+++|+|||++|+|| ||+++ .++++|
T Consensus 74 ~~------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ 139 (452)
T cd07102 74 QA------------GGEIRGMLERARYMISIAEEALADIRVP--EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIP 139 (452)
T ss_pred HH------------HHHHHHHHHHHHHHHHHHHHhcCCcccC--CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 31 1567777777777765 33222221111 12355677899999999999999 99987 499999
Q ss_pred HHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc--
Q 005131 423 AIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST-- 500 (713)
Q Consensus 423 ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~-- 500 (713)
||++||+||+|||+.+|.++..+.+++.++ |+|+|++|+|+|+.+.++.|..||.||+|+||||+++|++|++.+
T Consensus 140 ALaaGN~VVlKps~~~~~~~~~l~~~l~~a---GlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~ 216 (452)
T cd07102 140 ALLAGNAVILKHSPQTPLCGERFAAAFAEA---GLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAG 216 (452)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHhc---CCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 899999999997557888899999999999999999999999864
Q ss_pred -CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-----------------
Q 005131 501 -KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI----------------- 561 (713)
Q Consensus 501 -~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~----------------- 561 (713)
.+|+.+|+|||||+||++|||++.| ..+++++++|+||.|++++|+|||+++||+|+++|+
T Consensus 217 ~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~ 296 (452)
T cd07102 217 RFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTT 296 (452)
T ss_pred cCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCC
Confidence 4999999999999999999999999 667788889999999999999999999999999873
Q ss_pred -----------------HHHHhCCCEE-EcCCc------cccccC------C-CCCCCccccccCceEEEEEeCCHHHHH
Q 005131 562 -----------------DNLRSEGVTL-YGGPR------ASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAI 610 (713)
Q Consensus 562 -----------------~~~~~~Ga~l-~gg~~------~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi 610 (713)
++++++|+++ +||.. .+.|+. + ++|++++||+||||++|++|+|+||||
T Consensus 297 ~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 376 (452)
T cd07102 297 LGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAI 376 (452)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHH
Confidence 4556679988 77753 234542 3 688999999999999999999999999
Q ss_pred HHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 611 GHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 611 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+++|+++|||+++|||+|.+++.++++++++|.||||+++...+.+||||+|+||+|+ ++|++|+++||++|+++
T Consensus 377 ~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 377 ALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGV----TLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCc----cchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999999987667789999999999999 88999999999999986
No 62
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=100.00 E-value=1.7e-74 Score=639.84 Aligned_cols=375 Identities=19% Similarity=0.225 Sum_probs=331.7
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHH
Q 005131 292 AREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVR 371 (713)
Q Consensus 292 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~ 371 (713)
+++|+++|++||+.|+++|.++|.++|++++++|++++++|+....+++|++..++ ..|+..+++.++
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a------------~~ev~~~~~~~~ 68 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA------------RAEVEKCAWICR 68 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH------------HHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999988777777776542 157888888888
Q ss_pred HHhc-ccCccc-cccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 005131 372 VLAN-MEDPIG-HILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHK 447 (713)
Q Consensus 372 ~~a~-~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~ 447 (713)
+++. ..+..+ ...+ .++...+++++|+|||++|+|| ||++++ ++++|||++||+||+|||+.+|+++..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~ 144 (429)
T cd07100 69 YYAENAEAFLADEPIE----TDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEE 144 (429)
T ss_pred HHHHHHHHhcCCeecc----CCCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHH
Confidence 8876 322211 1111 1234567899999999999999 999985 999999999999999999999999999999
Q ss_pred HHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCCCHHH
Q 005131 448 IITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSADMDM 524 (713)
Q Consensus 448 ~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dADl~~ 524 (713)
++.++ |+|+|++|+|+|+.+.+..|..||+|++|+||||+++|+.|++.+ +||+++|+|||||+||++|||++.
T Consensus 145 ~l~~a---glP~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~ 221 (429)
T cd07100 145 LFREA---GFPEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDK 221 (429)
T ss_pred HHHHc---CCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHH
Confidence 99999 899999999997545567788899999999999999999999875 599999999999999999999999
Q ss_pred H-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------------------------HHHHhCCC
Q 005131 525 A-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI----------------------------------DNLRSEGV 569 (713)
Q Consensus 525 A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~----------------------------------~~~~~~Ga 569 (713)
| ..+++++|+|+||.|++++|||||+++||+|+++|+ ++++++|+
T Consensus 222 aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga 301 (429)
T cd07100 222 AVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGA 301 (429)
T ss_pred HHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCC
Confidence 9 567788899999999999999999999999999872 45667899
Q ss_pred EE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhc
Q 005131 570 TL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQ 638 (713)
Q Consensus 570 ~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~ 638 (713)
++ +||... +.|+. + ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++++
T Consensus 302 ~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 381 (429)
T cd07100 302 TLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARR 381 (429)
T ss_pred EEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHh
Confidence 98 787542 34442 3 6899999999999999999999999999999999999999999999999999999
Q ss_pred cCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 639 VDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 639 l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+++|.||||+++...+.+||||+|.||+|+ ++|++|+++||+.|+|+
T Consensus 382 l~~g~v~iN~~~~~~~~~pfGG~~~SG~G~----~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 382 LEAGMVFINGMVKSDPRLPFGGVKRSGYGR----ELGRFGIREFVNIKTVW 428 (429)
T ss_pred CCcCeEEECCCCCCCCCCCcCCccccccCC----cchHHHHHHhcceeEEe
Confidence 999999999987777889999999999999 88999999999999986
No 63
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=3.2e-74 Score=650.35 Aligned_cols=397 Identities=18% Similarity=0.196 Sum_probs=343.9
Q ss_pred HhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHh
Q 005131 267 VLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQE 346 (713)
Q Consensus 267 ~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~ 346 (713)
+.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++.+.+++|++..+
T Consensus 39 P~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 110 (524)
T PRK09407 39 PFTGEPLATVPVST--------AADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARRH 110 (524)
T ss_pred CCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Confidence 56889999887775 9999999999999999999999999999999999999999999998888888877644
Q ss_pred cCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHH
Q 005131 347 GYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALA 423 (713)
Q Consensus 347 ~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~A 423 (713)
+ ..|+...++.+++++. ..+..+..............+..++|+|||++|+|| ||+.++ ++++||
T Consensus 111 a------------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~A 178 (524)
T PRK09407 111 A------------FEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPA 178 (524)
T ss_pred H------------HHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHH
Confidence 2 1577777888887776 322222111100001124567899999999999999 999885 999999
Q ss_pred HHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc--
Q 005131 424 IRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST-- 500 (713)
Q Consensus 424 LaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~-- 500 (713)
|++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+| +.++++.|..| +|+|+||||+++|++|++.+
T Consensus 179 LaaGN~VIlKPs~~tp~~~~~l~~ll~ea---GlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~ 253 (524)
T PRK09407 179 LLAGNAVVLKPDSQTPLTALAAVELLYEA---GLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGR 253 (524)
T ss_pred HHcCCEEEEECCCCCHHHHHHHHHHHHHc---CCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999 899999999997 46678888765 89999999999999999875
Q ss_pred -CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-----------------
Q 005131 501 -KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI----------------- 561 (713)
Q Consensus 501 -~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~----------------- 561 (713)
.+|+++|||||||+||++|||++.| ..+++++|+|+||.|++++|+|||+++||+|+++|+
T Consensus 254 ~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~ 333 (524)
T PRK09407 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSAD 333 (524)
T ss_pred cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCc
Confidence 4999999999999999999999999 567778888999999999999999999999999873
Q ss_pred -----------------HHHHhCCCEE-EcCCcc----ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005131 562 -----------------DNLRSEGVTL-YGGPRA----SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGH 612 (713)
Q Consensus 562 -----------------~~~~~~Ga~l-~gg~~~----~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~ 612 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||++
T Consensus 334 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~ 413 (524)
T PRK09407 334 MGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVER 413 (524)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHH
Confidence 4567789998 787531 34442 3 67899999999999999999999999999
Q ss_pred HHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCC---CCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 613 IHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTR---FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 613 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~---~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+|+++|||++||||+|.+++.++++++++|.||||++.. ..+.+||||+|.||+|+ ++|++|+++||+.|+|+
T Consensus 414 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~ft~~k~v~ 489 (524)
T PRK09407 414 ANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGR----RHGAEGLLKYTESQTIA 489 (524)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCc----cchHHHHHHhCCeEEEE
Confidence 999999999999999999999999999999999998743 34578999999999999 88999999999999999
Q ss_pred ECC
Q 005131 690 KGS 692 (713)
Q Consensus 690 ~~~ 692 (713)
++.
T Consensus 490 ~~~ 492 (524)
T PRK09407 490 TQR 492 (524)
T ss_pred Ecc
Confidence 864
No 64
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=100.00 E-value=2.9e-74 Score=649.46 Aligned_cols=399 Identities=18% Similarity=0.187 Sum_probs=343.6
Q ss_pred HHHh-cCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 265 LKVL-QGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 265 ~~~~-tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
.++. +++.++++... +.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++....++|++
T Consensus 51 ~~P~~~~~~i~~~~~~--------~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 122 (511)
T TIGR01237 51 INPCDPSEVVGKVGKA--------SVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKI 122 (511)
T ss_pred ECCCCCCcEEEEEeCC--------CHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCC
Confidence 4566 47777776666 49999999999999999999999999999999999999999999998777777776
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIA 420 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~ 420 (713)
..+. ..|+..+++.++++++ ..+..+...... ..+...+++++|+|||++|+|| ||+.++ +++
T Consensus 123 ~~~a------------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i 188 (511)
T TIGR01237 123 IPEA------------DAEVAEAIDFCEYYAREMERLAGQGVNLD--IEGETNRYFYQPRGVAVVISPWNFPMAIAVGMT 188 (511)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecceeEEEECCCCcHHHHHHHHH
Confidence 5431 1578888888888886 333332221111 1344567889999999999999 999985 999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
+|||++||+||+|||+.+|+++..+++++.++ |+|+|+||+|+| +.++++.|..||++++|+||||+++|+.|++.
T Consensus 189 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a---GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 265 (511)
T TIGR01237 189 VAPIVTGNCVVLKPAETSTVIAAKIVEILIEA---GLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED 265 (511)
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh---CCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999998 46789999999999999999999999999875
Q ss_pred c---------CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH--------
Q 005131 500 T---------KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-------- 561 (713)
Q Consensus 500 ~---------~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-------- 561 (713)
+ .+|+++|||||||+||++|||++.| ..+++++|+|+||.|++++|+|||+++||+|+++|+
T Consensus 266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV 345 (511)
T ss_pred HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence 4 3799999999999999999999999 667888888999999999999999999999999873
Q ss_pred --------------------------HHHHhCCCEEEcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCC
Q 005131 562 --------------------------DNLRSEGVTLYGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDD 605 (713)
Q Consensus 562 --------------------------~~~~~~Ga~l~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~ 605 (713)
++++++|..++||... +.|+. + ++|++++||+||||++|++|+|
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~ 425 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAAD 425 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCC
Confidence 3455567434777532 34442 3 7899999999999999999999
Q ss_pred HHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCC-C-CCCCCccCccceeeccccCCCcccchHhhce
Q 005131 606 VHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTR-F-CDGARFGLGAEVGISTSRIHARGPVGVEGLL 683 (713)
Q Consensus 606 ~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~ 683 (713)
+||||+++|+++|||++||||+|.+++.++++++++|+||||++.. . .+.+||||+|.||+|+. ++|++|+++||
T Consensus 426 ~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~---~~g~~~l~~~~ 502 (511)
T TIGR01237 426 FDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSK---AGGPDYLLQFM 502 (511)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCc---CCCHHHHHHhc
Confidence 9999999999999999999999999999999999999999998743 3 34689999999999951 68999999999
Q ss_pred eEEEEEEC
Q 005131 684 TTRWILKG 691 (713)
Q Consensus 684 ~~k~v~~~ 691 (713)
++|+|+.+
T Consensus 503 ~~k~v~~~ 510 (511)
T TIGR01237 503 QPKTVTEN 510 (511)
T ss_pred ceEEEEEe
Confidence 99999865
No 65
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-74 Score=647.24 Aligned_cols=397 Identities=19% Similarity=0.194 Sum_probs=347.0
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSR--RLQAMSSEDRKKILLDIADALEANEELIIEENEADVAA 342 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~ 342 (713)
.++.||+.++++...+ .+|+++++++|++||+ .|+++|.++|+++|++++++|++++++|++....++|+
T Consensus 40 ~nP~tg~~i~~v~~~~--------~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 111 (494)
T PRK09847 40 VDPVTQAPLAKIARGK--------SVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGK 111 (494)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Confidence 4567889999887765 9999999999999997 69999999999999999999999999999877777777
Q ss_pred HHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 343 AEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 343 ~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
+..+.. ..|+..+++.+++++. .....++..+. ..+...+++++|+|||++|+|| ||++++ ++
T Consensus 112 ~~~~~~-----------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (494)
T PRK09847 112 PIRHSL-----------RDDIPGAARAIRWYAEAIDKVYGEVATT---SSHELAMIVREPVGVIAAIVPWNFPLLLTCWK 177 (494)
T ss_pred CHHHHH-----------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEecceeEEEEECCCccHHHHHHHH
Confidence 653310 1478888999999887 33333332221 1233457899999999999999 999985 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
++|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+| +.++++.|..||++|+|+||||+.+|+.|++
T Consensus 178 ~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a---GlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~ 254 (494)
T PRK09847 178 LGPALAAGNSVILKPSEKSPLSAIRLAGLAKEA---GLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLK 254 (494)
T ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHc---CcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999 899999999997 4667888888999999999999999999988
Q ss_pred hc----CCCeEEecCccceEEEcCCC-CHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-----------
Q 005131 499 ST----KIPVLGHADGICHIYVDKSA-DMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI----------- 561 (713)
Q Consensus 499 ~~----~~~v~lElgG~~p~iV~~dA-Dl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~----------- 561 (713)
.+ .+|+++|+|||||+||++|+ |++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 255 ~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 334 (494)
T PRK09847 255 DAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHP 334 (494)
T ss_pred HhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 53 48999999999999999997 99999 567778888999999999999999999999999883
Q ss_pred -----------------------HHHHhCCCEE-EcCCcc--cccc------CC-CCCCCccccccCceEEEEEeCCHHH
Q 005131 562 -----------------------DNLRSEGVTL-YGGPRA--SSLL------NI-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 562 -----------------------~~~~~~Ga~l-~gg~~~--~~~~------~v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
++++++| ++ +||... +.|+ ++ ++|++++||+||||++|++|+|+||
T Consensus 335 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 413 (494)
T PRK09847 335 LDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQ 413 (494)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHH
Confidence 4456678 66 777543 3344 24 6889999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
||+++|+++|||++||||+|.+++.++++++++|.|+||+++...+.+||||+|.||+|+ ++|++|+++||+.|+|
T Consensus 414 ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~ft~~k~v 489 (494)
T PRK09847 414 ALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGR----DKSLHALEKFTELKTI 489 (494)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCc----cchHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999987677789999999999999 8999999999999999
Q ss_pred EEC
Q 005131 689 LKG 691 (713)
Q Consensus 689 ~~~ 691 (713)
++.
T Consensus 490 ~~~ 492 (494)
T PRK09847 490 WIS 492 (494)
T ss_pred EEe
Confidence 864
No 66
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=100.00 E-value=4.5e-74 Score=648.15 Aligned_cols=399 Identities=19% Similarity=0.175 Sum_probs=342.8
Q ss_pred HHHHh-cCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-cHHHHHHHHhhHHH
Q 005131 264 ILKVL-QGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEA-NEELIIEENEADVA 341 (713)
Q Consensus 264 l~~~~-tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~-~~~~l~~~~~~~~~ 341 (713)
+.++. +|+.++++...+ .+|+++|+++|++||+.|+++|..+|.++|++++++|++ ++++|+.....+.|
T Consensus 50 v~~P~~tg~~l~~~~~~~--------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~G 121 (522)
T cd07123 50 QVMPHDHAHVLATYHYAD--------AALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQG 121 (522)
T ss_pred EECCCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcC
Confidence 45677 488888877765 999999999999999999999999999999999999996 89999987777777
Q ss_pred HHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccc-eeEEEEecC-CchHHH-
Q 005131 342 AAEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPL-GVLLIVFES-RPDALV- 417 (713)
Q Consensus 342 ~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~-~P~~~~- 417 (713)
++..++. ..++...++.+++++. ..+..+...... ..+...++.++|+ |||++|+|| ||+.++
T Consensus 122 k~~~~a~-----------~~~v~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~ 188 (522)
T cd07123 122 KNVWQAE-----------IDAACELIDFLRFNVKYAEELYAQQPLSS--PAGVWNRLEYRPLEGFVYAVSPFNFTAIGGN 188 (522)
T ss_pred CCHHHHh-----------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecCCceEEEECCcccHHHHHH
Confidence 7654310 1367778888888876 333222221111 1244567899998 999999999 998875
Q ss_pred HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHH
Q 005131 418 QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQI 496 (713)
Q Consensus 418 ~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i 496 (713)
++++||| +||+||+|||+.+|+++..+++++.++ |+|+|+||+|+|. +++++.|..||+|++|+||||+++|+.|
T Consensus 189 ~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~a---GlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i 264 (522)
T cd07123 189 LAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEA---GLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSL 264 (522)
T ss_pred HHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHc---CcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 9999999 599999999999999999999999999 8999999999974 5689999999999999999999999999
Q ss_pred HHhc---CC------CeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH------
Q 005131 497 KEST---KI------PVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL------ 560 (713)
Q Consensus 497 ~~~~---~~------~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l------ 560 (713)
++.+ .+ |+++|||||||+||++|||+|.| ..+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus 265 ~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 344 (522)
T cd07123 265 WKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKE 344 (522)
T ss_pred HHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhh
Confidence 9864 34 89999999999999999999999 57788888899999999999999999999999987
Q ss_pred ----------------------------HHHHHhC-CCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEE
Q 005131 561 ----------------------------IDNLRSE-GVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTI 600 (713)
Q Consensus 561 ----------------------------~~~~~~~-Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v 600 (713)
+++++++ |+++ +||... +.|+. + ++|++++||+||||++|
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V 424 (522)
T cd07123 345 IKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTV 424 (522)
T ss_pred CccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEE
Confidence 3566777 9999 787542 34542 3 78999999999999999
Q ss_pred EEeCC--HHHHHHHHHccC-CCceeEEEcCCHHHHHHHHhcc--CeeeEEEcCCCCC--CCCCCccCccceeec-cccCC
Q 005131 601 EIVDD--VHAAIGHIHQHG-SGHTDCIITNDSEAAEIFLRQV--DSAAVFHNASTRF--CDGARFGLGAEVGIS-TSRIH 672 (713)
Q Consensus 601 ~~~~~--~~eAi~~~N~~~-~gL~a~v~t~d~~~a~~~~~~l--~~G~v~iN~~~~~--~~~~pfGG~k~SG~g-~~~~~ 672 (713)
++|+| +||||+++|+++ |||++||||+|.+++.++++++ ++|.||||+.+.. .+.+||||+|.||+| +
T Consensus 425 ~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~---- 500 (522)
T cd07123 425 YVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDK---- 500 (522)
T ss_pred EEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcc----
Confidence 99984 799999999985 9999999999999999999996 5999999987433 357999999999996 7
Q ss_pred CcccchHhhceeEEEEEEC
Q 005131 673 ARGPVGVEGLLTTRWILKG 691 (713)
Q Consensus 673 ~~g~~~l~~~~~~k~v~~~ 691 (713)
++|++++++|++.|+++..
T Consensus 501 ~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 501 AGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred cCCHHHHHHhcceEEEEEe
Confidence 8999999999999999764
No 67
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=100.00 E-value=5.4e-74 Score=645.35 Aligned_cols=398 Identities=19% Similarity=0.230 Sum_probs=345.4
Q ss_pred HHhc-CCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 266 KVLQ-GERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 266 ~~~t-ge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
++.+ ++.++++... +.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++...+++|++.
T Consensus 20 ~P~t~~~~~~~~~~~--------~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~ 91 (478)
T cd07131 20 NPADLEEVVGTFPLS--------TASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPL 91 (478)
T ss_pred CCCCCCeEEEEEeCC--------CHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 4566 4677776655 489999999999999999999999999999999999999999999987777777665
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+. ..|+..+++.+++++. ..+..++..+.. ..+...+.+++|+|||++|+|| ||+.++ ++++
T Consensus 92 ~~~------------~~ev~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 157 (478)
T cd07131 92 AEG------------RGDVQEAIDMAQYAAGEGRRLFGETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIF 157 (478)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhCCcccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHHH
Confidence 431 1578888888888876 333332222211 1233567899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+|. .++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 158 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~a---GlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~a 234 (478)
T cd07131 158 PALVCGNTVVFKPAEDTPACALKLVELFAEA---GLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETC 234 (478)
T ss_pred HHHHcCCEEEEECCCcCcHHHHHHHHHHHhc---CcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999 8999999999984 55889999999999999999999999998764
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
.+|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 235 a~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 314 (478)
T cd07131 235 ARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEE 314 (478)
T ss_pred hhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 5999999999999999999999999 667788899999999999999999999999999872
Q ss_pred -------------------HHHHhCCCEE-EcCCcc-------ccccC------C-CCCCCccccccCceEEEEEeCCHH
Q 005131 562 -------------------DNLRSEGVTL-YGGPRA-------SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 562 -------------------~~~~~~Ga~l-~gg~~~-------~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|
T Consensus 315 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ 394 (478)
T cd07131 315 TDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLE 394 (478)
T ss_pred CcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHH
Confidence 4566789998 777431 33442 3 688999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCC-CCCCCCccCccceeec-cccCCCcccchHhhceeE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTR-FCDGARFGLGAEVGIS-TSRIHARGPVGVEGLLTT 685 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~g-~~~~~~~g~~~l~~~~~~ 685 (713)
|||+++|+++|||+++|||+|.+++.++++++++|+|+||+++. ..+.+||||+|+||+| + ++|++|+++||+.
T Consensus 395 eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~----~~g~~~~~~f~~~ 470 (478)
T cd07131 395 EAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHR----EAGTTALDAFTEW 470 (478)
T ss_pred HHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCc----CCcHHHHHHhhhe
Confidence 99999999999999999999999999999999999999999854 4578999999999999 6 7899999999999
Q ss_pred EEEEECC
Q 005131 686 RWILKGS 692 (713)
Q Consensus 686 k~v~~~~ 692 (713)
|+|++++
T Consensus 471 k~i~~~~ 477 (478)
T cd07131 471 KAVYVDY 477 (478)
T ss_pred EEEEEeC
Confidence 9998753
No 68
>PLN02203 aldehyde dehydrogenase
Probab=100.00 E-value=8.2e-74 Score=636.62 Aligned_cols=383 Identities=22% Similarity=0.229 Sum_probs=325.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHH
Q 005131 287 FNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSL 366 (713)
Q Consensus 287 ~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~ 366 (713)
.+.+|+++|+++|++||+.|+.+++.+|.++|++++++|++++++|++++.+++|++..++ .. .||..+
T Consensus 3 ~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea----~~-------~Ev~~~ 71 (484)
T PLN02203 3 APGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEA----YR-------DEVGVL 71 (484)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH----HH-------HHHHHH
Confidence 3578999999999999999999999999999999999999999999998888888876542 11 355566
Q ss_pred HHHHHHHhc-ccCcccc---ccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchH
Q 005131 367 ANSVRVLAN-MEDPIGH---ILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKR 440 (713)
Q Consensus 367 ~~~l~~~a~-~~~~~~~---~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~ 440 (713)
++.++++++ ..+..+. ..+.. ..+...++.++|+|||++|+|| ||+.+. +++++||++||+||+|||+.+|+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~ 149 (484)
T PLN02203 72 TKSANLALSNLKKWMAPKKAKLPLV--AFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPA 149 (484)
T ss_pred HHHHHHHHHHHHHHhccccccCCcc--cCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChH
Confidence 666665554 2211111 01110 1234568899999999999999 999985 99999999999999999999999
Q ss_pred HHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEc
Q 005131 441 SNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVD 517 (713)
Q Consensus 441 ~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~ 517 (713)
++.++.+++.++ +|+|+||+|+|+.++++.|..|+ +|+|+||||+++|+.|++.+ ++|+++|||||||+||+
T Consensus 150 ~~~~l~~~~~~~----lP~gvv~vv~g~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~ 224 (484)
T PLN02203 150 TSAFLAANIPKY----LDSKAVKVIEGGPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVD 224 (484)
T ss_pred HHHHHHHHHHHh----CCcCEEEEEeCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEc
Confidence 999999999875 77779999998777888888885 99999999999999999875 69999999999999999
Q ss_pred C---CCCHHHHH-HHHHHccC-CCCCccccCceEEEcCCCchhHHHHHH-------------------------------
Q 005131 518 K---SADMDMAK-QIVLDAKV-DYPAACNAMETLLIHQDLVPTGFNELI------------------------------- 561 (713)
Q Consensus 518 ~---dADl~~A~-~~~~~~~~-~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------------------------- 561 (713)
+ |||++.|+ .+++++|. |+||.|+|++|+|||++++|+|+++|+
T Consensus 225 ~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~ 304 (484)
T PLN02203 225 SLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSN 304 (484)
T ss_pred cCCCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHH
Confidence 7 69999995 55566674 789999999999999999999999884
Q ss_pred --HHHHhCCCEE-EcCCcc--ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCH
Q 005131 562 --DNLRSEGVTL-YGGPRA--SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDS 629 (713)
Q Consensus 562 --~~~~~~Ga~l-~gg~~~--~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~ 629 (713)
++++++ +++ +||... +.|+. + ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 305 ~i~~a~~~-~~~~~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~ 383 (484)
T PLN02203 305 LLKDPRVA-ASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNE 383 (484)
T ss_pred HHHHHHhC-CeEEeCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 233444 455 777542 44442 3 6899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCeeeEEEcCCCC--CCCCCCccCccceeeccccCCCcccchHhhceeEEEEEECC
Q 005131 630 EAAEIFLRQVDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGS 692 (713)
Q Consensus 630 ~~a~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 692 (713)
+++.++++++++|.|+||++.. ..+.+||||+|+||+|+ ++|++|+++||++|+|+++.
T Consensus 384 ~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr----~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 384 KLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGR----YHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred HHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCc----cccHHHHHHhcceeEEEEcC
Confidence 9999999999999999998743 34779999999999999 88999999999999999874
No 69
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=100.00 E-value=3.9e-74 Score=645.26 Aligned_cols=396 Identities=19% Similarity=0.231 Sum_probs=345.1
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
+++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+....++.|++.
T Consensus 18 ~~P~t~~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 89 (468)
T cd07088 18 LNPATGEVVATVPAAT--------AEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTL 89 (468)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 4566888888887764 99999999999999999999999999999999999999999999976666666554
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++ ..|+..+++.+++++. ..+..+...+.. ..+...+.+++|+|||++|+|| ||++++ ++++
T Consensus 90 ~~a------------~~ev~~~~~~l~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 155 (468)
T cd07088 90 SLA------------RVEVEFTADYIDYMAEWARRIEGEIIPSD--RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLA 155 (468)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhCCccccCc--cccceeEEEEecceeEEEEccCchHHHHHHHHHH
Confidence 331 1577788888888876 333233222211 1244567889999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
+||++||+||+|||+.+|.++..+++++.++ |+|+|++|+|+|+ +++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 156 ~AL~aGN~VVlKps~~~p~~~~~l~~~~~~a---glP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 232 (468)
T cd07088 156 PALVTGNTIVIKPSEETPLNALEFAELVDEA---GLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAA 232 (468)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHHc---CcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999998 8999999999985 55888899999999999999999999998864
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
.+|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 233 a~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 312 (468)
T cd07088 233 AENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAA 312 (468)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 5999999999999999999999999 567778888999999999999999999999999873
Q ss_pred -------------------HHHHhCCCEE-EcCCcc----ccccC------C-CCCCCccccccCceEEEEEeCCHHHHH
Q 005131 562 -------------------DNLRSEGVTL-YGGPRA----SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAI 610 (713)
Q Consensus 562 -------------------~~~~~~Ga~l-~gg~~~----~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi 610 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 392 (468)
T cd07088 313 TDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAI 392 (468)
T ss_pred CccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHH
Confidence 4556789998 787542 34442 3 688999999999999999999999999
Q ss_pred HHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 611 GHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 611 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+++|+++|||++||||+|.+++.++++++++|.||||+++......||||+|.||+|+ ++|++|+++||+.|+|+
T Consensus 393 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~----~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 393 ELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGG----ADGKHGLEEYLQTKVVY 467 (468)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCc----CchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999999986656667999999999999 89999999999999986
No 70
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=100.00 E-value=2.3e-74 Score=647.56 Aligned_cols=397 Identities=18% Similarity=0.210 Sum_probs=348.6
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRL--QAMSSEDRKKILLDIADALEANEELIIEENEADVAA 342 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w--~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~ 342 (713)
+++.+|+.++++...+ .+|+++++++|++||+.| +++|.++|.++|+++++.|++++++|+..+.+++|+
T Consensus 24 ~~P~t~~~i~~~~~~~--------~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk 95 (476)
T cd07091 24 INPATEEVICQVAEAD--------EEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGK 95 (476)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Confidence 3567888889877664 899999999999999985 599999999999999999999999999888888887
Q ss_pred HHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 343 AEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 343 ~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
+..+. ...|+..+++.+++++. ..+..+...+. ..+...+..++|+|||++|+|| ||++++ ++
T Consensus 96 ~~~~~-----------~~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 161 (476)
T cd07091 96 PLEES-----------AKGDVALSIKCLRYYAGWADKIQGKTIPI---DGNFLAYTRREPIGVCGQIIPWNFPLLMLAWK 161 (476)
T ss_pred CHHHH-----------HHHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeceeEEEEECCCcCHHHHHHHH
Confidence 75321 01588888999998876 33333332221 1345567899999999999999 999985 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
++|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+| +.++++.|..||++|+|+||||+++|+.|++
T Consensus 162 ~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~a---glP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~ 238 (476)
T cd07091 162 LAPALAAGNTVVLKPAEQTPLSALYLAELIKEA---GFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIME 238 (476)
T ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHc---CcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999 899999999997 4678899999999999999999999999997
Q ss_pred hc----CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH------------
Q 005131 499 ST----KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------ 561 (713)
Q Consensus 499 ~~----~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------ 561 (713)
.+ .+|+++|||||||+||++|||++.| ..+++++++|+||.|+|++|||||+++||+|+++|+
T Consensus 239 ~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~ 318 (476)
T cd07091 239 AAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPF 318 (476)
T ss_pred HHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 54 4899999999999999999999999 667788888999999999999999999999999873
Q ss_pred ----------------------HHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHH
Q 005131 562 ----------------------DNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 562 ----------------------~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||
T Consensus 319 ~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07091 319 DPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDE 398 (476)
T ss_pred CCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHH
Confidence 4456689998 777643 33442 3 6889999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||+|.||+|+ ++|++|+++||+.|+|
T Consensus 399 ai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~f~~~k~~ 474 (476)
T cd07091 399 VIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGR----ELGEEGLEEYTQVKAV 474 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCc----cchHHHHHHhhceeEE
Confidence 999999999999999999999999999999999999999987777889999999999999 8899999999999998
Q ss_pred EE
Q 005131 689 LK 690 (713)
Q Consensus 689 ~~ 690 (713)
++
T Consensus 475 ~~ 476 (476)
T cd07091 475 TI 476 (476)
T ss_pred eC
Confidence 63
No 71
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=100.00 E-value=9.8e-74 Score=642.18 Aligned_cols=397 Identities=17% Similarity=0.128 Sum_probs=342.9
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.||+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++....++|++.
T Consensus 18 ~~P~t~~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 89 (484)
T TIGR03240 18 TNPATQEVLWQGAAAS--------AAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPL 89 (484)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 3567889999887765 99999999999999999999999999999999999999999999988888777766
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+. ..|+..+++.+++++. .....+..... ..+...+++++|+|||++|+|| ||+.++ ++++
T Consensus 90 ~~a------------~~ev~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~ 154 (484)
T TIGR03240 90 WET------------RTEVASMIGKVAISIKAYHERTGESENP---MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIV 154 (484)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEEecccEEEEECCCchHHHHHHHHHH
Confidence 441 1577788888877665 22222222111 1233457889999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
+||++||+||+|||+.+|+++..++++++++ |+|+|+||+|+|+.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 155 ~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~a---GlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa 231 (484)
T TIGR03240 155 PALLAGNTVVFKPSELTPWVAEETVKLWEKA---GLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFA 231 (484)
T ss_pred HHHHcCCEEEEECCccccHHHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999 899999999998767889999999999999999999999999863
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCc-hhHHHHHH--------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLV-PTGFNELI-------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~-d~fi~~l~-------------- 561 (713)
.+|++||||||||+||++|||++.| ..+++++|+|+||.|++++|||||++++ |+|+++|+
T Consensus 232 ~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~ 311 (484)
T TIGR03240 232 GRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAE 311 (484)
T ss_pred hcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcC
Confidence 3779999999999999999999999 5677888899999999999999999995 99999873
Q ss_pred ---------------------HHHHhCCCEE-EcCCc---cccccC-----C-CCCCCccccccCceEEEEEeCCHHHHH
Q 005131 562 ---------------------DNLRSEGVTL-YGGPR---ASSLLN-----I-PEPNSFHHEYNSMACTIEIVDDVHAAI 610 (713)
Q Consensus 562 ---------------------~~~~~~Ga~l-~gg~~---~~~~~~-----v-~~~~~~~eE~FgPvl~v~~~~~~~eAi 610 (713)
++++++|+++ +||.. .+.|+. + ++|++++||+||||++|++|+|+||||
T Consensus 312 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl~v~~~~~i~~eE~FGPVl~v~~~~~~~eai 391 (484)
T TIGR03240 312 PQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAI 391 (484)
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEEccCCCCHHHhCCCcCCeEEEEEeCCHHHHH
Confidence 2556779887 66643 134542 3 678999999999999999999999999
Q ss_pred HHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCC-CCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 611 GHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 611 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+++|+++|||++||||+|.++++++++++++|.|+||++. ...+.+||||+|.||+|+ ++|.++++ |++.|+++
T Consensus 392 ~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~----~~g~~~~~-~~~~~~~~ 466 (484)
T TIGR03240 392 AIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHR----PSAYYAAD-YCAYPVAS 466 (484)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCC----CCchHHHh-heeeeEEE
Confidence 9999999999999999999999999999999999999874 445679999999999999 88866655 99999999
Q ss_pred ECC
Q 005131 690 KGS 692 (713)
Q Consensus 690 ~~~ 692 (713)
++.
T Consensus 467 ~~~ 469 (484)
T TIGR03240 467 LEA 469 (484)
T ss_pred Eec
Confidence 875
No 72
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=100.00 E-value=5.8e-74 Score=641.56 Aligned_cols=394 Identities=22% Similarity=0.225 Sum_probs=343.0
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH-
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE- 344 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~- 344 (713)
++.||+.++.+...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++.+.+++|++.
T Consensus 3 ~P~t~~~~~~~~~~~--------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 74 (457)
T cd07108 3 NPATGQVIGEVPRSR--------AADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALR 74 (457)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcH
Confidence 467899999887664 99999999999999999999999999999999999999999999988888888764
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+. ..|+..+++.+++++. ..+..+...+. ..+...+..++|+|||++|+|| ||+.++ ++++
T Consensus 75 ~~a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 139 (457)
T cd07108 75 TQA------------RPEAAVLADLFRYFGGLAGELKGETLPF---GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIA 139 (457)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhCCceecc---CCCeeEEEEeecceEEEEECCCchHHHHHHHHHH
Confidence 231 1578888888888886 22222222211 1344567889999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
+||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 140 ~ALaaGN~VVlKps~~~p~~~~~l~~~~~~~----lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~a 215 (457)
T cd07108 140 PALVAGNTVVLKAAEDAPLAVLLLAEILAQV----LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAA 215 (457)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHHh----CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999876 67779999997 456889899999999999999999999999875
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHc-cCCCCCccccCceEEEcCCCchhHHHHHH--------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDA-KVDYPAACNAMETLLIHQDLVPTGFNELI-------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~-~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-------------- 561 (713)
.+|+++|+|||||+||++|||++.| ..+++++ |.|+||.|++++|||||++++|+|+++|+
T Consensus 216 a~~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~ 295 (457)
T cd07108 216 ADRLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDE 295 (457)
T ss_pred hccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 4899999999999999999999999 5566664 77899999999999999999999999873
Q ss_pred --------------------HHHHh-CCCEE-EcCCcc-------ccccC------C-CCCCCccccccCceEEEEEeCC
Q 005131 562 --------------------DNLRS-EGVTL-YGGPRA-------SSLLN------I-PEPNSFHHEYNSMACTIEIVDD 605 (713)
Q Consensus 562 --------------------~~~~~-~Ga~l-~gg~~~-------~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~ 605 (713)
+++++ +|+++ +||... +.|+. + ++|++++||+||||++|++|+|
T Consensus 296 ~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 375 (457)
T cd07108 296 ATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKD 375 (457)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCC
Confidence 34444 89998 787542 33442 3 7899999999999999999999
Q ss_pred HHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccch-Hhhcee
Q 005131 606 VHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVG-VEGLLT 684 (713)
Q Consensus 606 ~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~-l~~~~~ 684 (713)
+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|+||+|+ ++|.++ +++||+
T Consensus 376 ~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~~~~~f~~ 451 (457)
T cd07108 376 EDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGR----EASLEGMLEHFTQ 451 (457)
T ss_pred HHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCC----CccchhHHHHhhc
Confidence 999999999999999999999999999999999999999999987667789999999999999 788866 799999
Q ss_pred EEEEEE
Q 005131 685 TRWILK 690 (713)
Q Consensus 685 ~k~v~~ 690 (713)
+|+|++
T Consensus 452 ~k~i~~ 457 (457)
T cd07108 452 KKTVNI 457 (457)
T ss_pred eEEEeC
Confidence 999863
No 73
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=100.00 E-value=6.6e-74 Score=646.13 Aligned_cols=400 Identities=18% Similarity=0.200 Sum_probs=342.6
Q ss_pred HHHHhc-CCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HcHHHHHHHHhhHHH
Q 005131 264 ILKVLQ-GERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALE-ANEELIIEENEADVA 341 (713)
Q Consensus 264 l~~~~t-ge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~l~~~~~~~~~ 341 (713)
+.++.+ |+.++++...+ .+|+++|+++|++||+.|+++|..+|+++|++++++|+ +++++|+.....++|
T Consensus 50 ~~nP~t~g~~i~~~~~~~--------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~G 121 (533)
T TIGR01236 50 QVQPHNHQAVLAKATNAT--------EEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQS 121 (533)
T ss_pred EECCCCCCeEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcC
Confidence 456775 67888877664 99999999999999999999999999999999999999 599999987777777
Q ss_pred HHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccc-eeEEEEecC-CchHHH-
Q 005131 342 AAEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPL-GVLLIVFES-RPDALV- 417 (713)
Q Consensus 342 ~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~-~P~~~~- 417 (713)
++..++. ..++..+++.+++++. ..+..+...... ..+...++.++|+ |||++|+|| ||+.+.
T Consensus 122 K~~~~a~-----------~e~v~~~i~~~~~~a~~a~~~~~~~~~~~--~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~ 188 (533)
T TIGR01236 122 KNVYQAE-----------IDAVAELIDFFRFNVKYARELYEQQPSES--APGEWNRTDYRPLEGFVYAISPFNFTAIAGN 188 (533)
T ss_pred CcHHHHh-----------HhHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecCCCEEEEEeCCchHHHHHH
Confidence 7664421 1247788899998886 333333222111 1244578899999 999999999 998774
Q ss_pred HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHH
Q 005131 418 QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQI 496 (713)
Q Consensus 418 ~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i 496 (713)
++++||| +||+||+|||+.+|+++..++++|.++ |+|+|+||+|+|. .++++.|..||+|++|+||||+++|+.|
T Consensus 189 ~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~a---GlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i 264 (533)
T TIGR01236 189 LPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEA---GLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHL 264 (533)
T ss_pred HHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhc---CCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 9999999 799999999999999999999999999 9999999999974 6788899999999999999999999999
Q ss_pred HHhc---CC------CeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-----
Q 005131 497 KEST---KI------PVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI----- 561 (713)
Q Consensus 497 ~~~~---~~------~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~----- 561 (713)
++.+ .+ ++++|||||||+||++|||++.| ..+++++|.|+||.|++++|+|||+++||+|+++|+
T Consensus 265 ~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 344 (533)
T TIGR01236 265 WKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAE 344 (533)
T ss_pred HHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhc
Confidence 9864 34 49999999999999999999999 667788888999999999999999999999999872
Q ss_pred -----------------------------HHHHhCC--CEE-EcCCcc---ccccC------C-CCCCCccccccCceEE
Q 005131 562 -----------------------------DNLRSEG--VTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACT 599 (713)
Q Consensus 562 -----------------------------~~~~~~G--a~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~ 599 (713)
++++++| +++ +||... +.|+. + ++|++++||+||||++
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~ 424 (533)
T TIGR01236 345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT 424 (533)
T ss_pred CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence 4566676 687 777543 34542 3 7899999999999999
Q ss_pred EEEeCC--HHHHHHHH-HccCCCceeEEEcCCHHHHHHHHhccC--eeeEEEcCCCC-C-CCCCCccCccceeec-cccC
Q 005131 600 IEIVDD--VHAAIGHI-HQHGSGHTDCIITNDSEAAEIFLRQVD--SAAVFHNASTR-F-CDGARFGLGAEVGIS-TSRI 671 (713)
Q Consensus 600 v~~~~~--~~eAi~~~-N~~~~gL~a~v~t~d~~~a~~~~~~l~--~G~v~iN~~~~-~-~~~~pfGG~k~SG~g-~~~~ 671 (713)
|++|+| ++|||+++ |+++|||+++|||+|.+++.+++++++ +|.||||+.+. . .+.+||||+|.||+| +
T Consensus 425 v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~--- 501 (533)
T TIGR01236 425 VYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDK--- 501 (533)
T ss_pred EEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcc---
Confidence 999998 59999999 899999999999999999999999977 99999997643 2 367999999999998 7
Q ss_pred CCcccchHhhceeEEEEEECC
Q 005131 672 HARGPVGVEGLLTTRWILKGS 692 (713)
Q Consensus 672 ~~~g~~~l~~~~~~k~v~~~~ 692 (713)
++|++|+++|+++|+|+...
T Consensus 502 -~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 502 -AGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred -cCCHHHHHHhcceEEEEEEc
Confidence 88999999999999998754
No 74
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=100.00 E-value=1e-73 Score=641.51 Aligned_cols=399 Identities=18% Similarity=0.152 Sum_probs=345.2
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.||+.++++...+ .+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+..+..++|++.
T Consensus 21 ~~P~t~~~i~~~~~~~--------~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 92 (477)
T TIGR01722 21 TNPATNEVTTKVAFAS--------VDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTH 92 (477)
T ss_pred eCCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 4567899999887764 99999999999999999999999999999999999999999999987777777665
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.++ ..|+..+++.+++++. .....++.... ...+...+..++|+|||++|+|| ||+.++ ++++
T Consensus 93 ~~a------------~~ev~~~i~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 158 (477)
T TIGR01722 93 SDA------------LGDVARGLEVVEHACGVNSLLKGETSTQ--VATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP 158 (477)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence 442 1688888888888876 22222222211 11344567899999999999999 999985 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
+||++||+||+|||+.+|.++..+.+++.++ |+|+|++|+|+|+.+.++.|..||+|++|+||||+++|+.|++.+
T Consensus 159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~a---glP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~ 235 (477)
T TIGR01722 159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEA---GAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGS 235 (477)
T ss_pred HHHhcCCEEEeeCcccChHHHHHHHHHHHHh---CcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 999999999998655678888899999999999999999998764
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------------- 561 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------- 561 (713)
.||+++|+|||||+||++|||++.| ..++.++|.|+||.|++++|+|||+++ ++|+++|+
T Consensus 236 ~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~ 314 (477)
T TIGR01722 236 AHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGA 314 (477)
T ss_pred hcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCC
Confidence 5899999999999999999999999 456667788899999999999999999 99999884
Q ss_pred ------------------HHHHhCCCEE-EcCCcc-------cccc-C-----C-CCCCCccccccCceEEEEEeCCHHH
Q 005131 562 ------------------DNLRSEGVTL-YGGPRA-------SSLL-N-----I-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 562 ------------------~~~~~~Ga~l-~gg~~~-------~~~~-~-----v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
++++++|+++ +||... +.|+ + + ++|.+++||+||||++|++|+|++|
T Consensus 315 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~e 394 (477)
T TIGR01722 315 EMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEE 394 (477)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHH
Confidence 4457789998 777531 3344 2 3 6889999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCC-CCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
||+++|+++|||+++|||+|.+++.+|++++++|.||||+++.. .+.+||||+|.||+|+ ++++|++|+++||+.|+
T Consensus 395 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~--~~~~g~~~l~~~~~~k~ 472 (477)
T TIGR01722 395 AIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGD--HHIYGKQGTHFYTRGKT 472 (477)
T ss_pred HHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCC--CccChHHHHHHhcCeeE
Confidence 99999999999999999999999999999999999999986543 4678999999999994 22789999999999999
Q ss_pred EEEC
Q 005131 688 ILKG 691 (713)
Q Consensus 688 v~~~ 691 (713)
|+++
T Consensus 473 i~~~ 476 (477)
T TIGR01722 473 VTTR 476 (477)
T ss_pred EEEe
Confidence 9875
No 75
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=100.00 E-value=1.1e-73 Score=640.52 Aligned_cols=391 Identities=22% Similarity=0.227 Sum_probs=341.9
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+..+.+++|++.
T Consensus 19 ~~P~~~~~~~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 90 (466)
T cd07138 19 INPATEEVIGTVPLGT--------AADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPI 90 (466)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 3466888888887664 99999999999999999999999999999999999999999999988888887776
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
.+.. ..|+...++.++++++ .....+.. .....+..++|+|||++|+|| ||+.++ ++++
T Consensus 91 ~~~~-----------~~ev~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 152 (466)
T cd07138 91 TLAR-----------AAQVGLGIGHLRAAADALKDFEFEE-------RRGNSLVVREPIGVCGLITPWNWPLNQIVLKVA 152 (466)
T ss_pred HHHH-----------HHHHHHHHHHHHHHHHhhhhccccc-------cCceEEEEEeecceEEEECCCccHHHHHHHHHH
Confidence 4310 1366777778887776 32221111 012356789999999999999 999885 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
|||++||+||+|||+.+|.++.++++++.++ |+|+|+||+|+|. +++++.|..||++++|+||||+++|+.|++.+
T Consensus 153 ~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~a---GlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 229 (466)
T cd07138 153 PALAAGCTVVLKPSEVAPLSAIILAEILDEA---GLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAA 229 (466)
T ss_pred HHHhcCCEEEEECCCcCcHHHHHHHHHHHHc---CCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999974 56889999999999999999999999999875
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
.+|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 230 a~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 309 (466)
T cd07138 230 ADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPA 309 (466)
T ss_pred hccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 5999999999999999999999999 567788888999999999999999999999999773
Q ss_pred -------------------HHHHhCCCEE-EcCCc------cccccC------C-CCCCCccccccCceEEEEEeCCHHH
Q 005131 562 -------------------DNLRSEGVTL-YGGPR------ASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 562 -------------------~~~~~~Ga~l-~gg~~------~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
++++++|+++ +||.. .+.|+. + ++|++++||+||||++|++|+|+||
T Consensus 310 ~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~e 389 (466)
T cd07138 310 TTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDE 389 (466)
T ss_pred CcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHH
Confidence 4456789998 77742 133442 3 6889999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
||+++|+++|||+++|||+|.+++.++++++++|+|+||+.. ..+.+||||+|.||+|+ ++|++|+++||+.|+|
T Consensus 390 ai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~----~~g~~~~~~~~~~k~v 464 (466)
T cd07138 390 AIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGR----EWGRYGLEEFLEVKSI 464 (466)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCc----cchHHHHHHhcceeEE
Confidence 999999999999999999999999999999999999999863 56789999999999999 8899999999999988
Q ss_pred E
Q 005131 689 L 689 (713)
Q Consensus 689 ~ 689 (713)
+
T Consensus 465 ~ 465 (466)
T cd07138 465 Q 465 (466)
T ss_pred e
Confidence 5
No 76
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=100.00 E-value=5.9e-74 Score=640.91 Aligned_cols=396 Identities=19% Similarity=0.216 Sum_probs=348.0
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSR--RLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
++.+|+.++++...+ .+|+++++++|++||+ .|+++|.++|.++|+++++.|++++++|++...+++|++
T Consensus 8 ~P~t~~~i~~~~~~~--------~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 79 (462)
T cd07112 8 NPATGRVLAEVAACD--------AADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKP 79 (462)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCc
Confidence 466889999887664 9999999999999997 599999999999999999999999999998888888877
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIA 420 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~ 420 (713)
..++. ..|+..+++.+++++. .....+...+. ..+...+..++|+|||++|+|| ||++++ +++
T Consensus 80 ~~~a~-----------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~ 145 (462)
T cd07112 80 ISDAL-----------AVDVPSAANTFRWYAEAIDKVYGEVAPT---GPDALALITREPLGVVGAVVPWNFPLLMAAWKI 145 (462)
T ss_pred HHHHH-----------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHH
Confidence 65421 1478888888888876 33333322211 1244567899999999999999 999985 999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
+|||++||+||+|||+.+|.++..+++++.++ |+|+|++|+|+| +.++++.|..||++|+|+||||+++|+.|++.
T Consensus 146 ~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~a---GlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 222 (462)
T cd07112 146 APALAAGNSVVLKPAEQSPLTALRLAELALEA---GLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEY 222 (462)
T ss_pred HHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhc---CCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999 899999999997 46789999999999999999999999999874
Q ss_pred c----CCCeEEecCccceEEEcCCC-CHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH------------
Q 005131 500 T----KIPVLGHADGICHIYVDKSA-DMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------ 561 (713)
Q Consensus 500 ~----~~~v~lElgG~~p~iV~~dA-Dl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------ 561 (713)
+ +||+++|+|||||+||++|| |++.| ..+++++++|+||.|++++|||||+++||+|+++|+
T Consensus 223 aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~ 302 (462)
T cd07112 223 SGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPL 302 (462)
T ss_pred HHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCC
Confidence 3 59999999999999999999 99999 567788888999999999999999999999999873
Q ss_pred ----------------------HHHHhCCCEE-EcCCcc-----ccccC------C-CCCCCccccccCceEEEEEeCCH
Q 005131 562 ----------------------DNLRSEGVTL-YGGPRA-----SSLLN------I-PEPNSFHHEYNSMACTIEIVDDV 606 (713)
Q Consensus 562 ----------------------~~~~~~Ga~l-~gg~~~-----~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~ 606 (713)
++++++|+++ +||... +.|+. + +++++++||+||||++|++|+|+
T Consensus 303 ~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 382 (462)
T cd07112 303 DPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSE 382 (462)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCH
Confidence 3456689998 777542 33442 3 68999999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEE
Q 005131 607 HAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 686 (713)
Q Consensus 607 ~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k 686 (713)
||||+++|+++|||++||||+|.+++.++++++++|.|+||+.+...+.+||||+|+||+|+ ++|++|+++||+.|
T Consensus 383 ~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~----~~g~~~~~~f~~~k 458 (462)
T cd07112 383 EEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGR----DKSLHALDKYTELK 458 (462)
T ss_pred HHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCc----cchHHHHHHHhcee
Confidence 99999999999999999999999999999999999999999987667889999999999999 88999999999999
Q ss_pred EEEE
Q 005131 687 WILK 690 (713)
Q Consensus 687 ~v~~ 690 (713)
+|++
T Consensus 459 ~i~~ 462 (462)
T cd07112 459 TTWI 462 (462)
T ss_pred EEEC
Confidence 9863
No 77
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=100.00 E-value=1.4e-73 Score=642.77 Aligned_cols=398 Identities=19% Similarity=0.200 Sum_probs=342.5
Q ss_pred HHHh-cCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 265 LKVL-QGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 265 ~~~~-tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
.++. +|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+.....++|++
T Consensus 37 ~~P~~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 108 (500)
T cd07083 37 VSPFAPSEVVGTTAKAD--------KAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKN 108 (500)
T ss_pred eCCCCCCcEEEEEcCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCC
Confidence 4555 577777776664 9999999999999999999999999999999999999999999998777777776
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIA 420 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~ 420 (713)
..+. ..|+..+++.++++++ ..+..+...... ...+...+..++|+|||++|+|| ||+.++ +++
T Consensus 109 ~~~a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 175 (500)
T cd07083 109 WVEA------------IDDVAEAIDFIRYYARAALRLRYPAVEVV-PYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMI 175 (500)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHhcCcccccC-CCCCceEEEEEeccceEEEEcCCccHHHHHHHHH
Confidence 5331 2678888888888886 333222211100 01344567889999999999999 999885 999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
+|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+| +.++++.|..||+||+|+||||+++|+.|++.
T Consensus 176 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea---GlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~ 252 (500)
T cd07083 176 VAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEA---GFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEA 252 (500)
T ss_pred HHHHHcCCeEEEeCCCcchHHHHHHHHHHHHc---CCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999997 46788999999999999999999999999876
Q ss_pred c---------CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH--------
Q 005131 500 T---------KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-------- 561 (713)
Q Consensus 500 ~---------~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-------- 561 (713)
+ .+|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|+|||++++|+|+++|+
T Consensus 253 aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 332 (500)
T cd07083 253 AARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSV 332 (500)
T ss_pred HhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCC
Confidence 4 2899999999999999999999999 567778888999999999999999999999999873
Q ss_pred --------------------------HHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeC
Q 005131 562 --------------------------DNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVD 604 (713)
Q Consensus 562 --------------------------~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~ 604 (713)
++++++| ++ +||... +.|+. + ++|++++||+||||++|++|+
T Consensus 333 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 411 (500)
T cd07083 333 GPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYK 411 (500)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeC
Confidence 3344556 55 787542 33442 3 689999999999999999999
Q ss_pred --CHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCC--CCCCccCccceeec-cccCCCcccchH
Q 005131 605 --DVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFC--DGARFGLGAEVGIS-TSRIHARGPVGV 679 (713)
Q Consensus 605 --~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfGG~k~SG~g-~~~~~~~g~~~l 679 (713)
|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+++... +.+||||+|.||+| + ++|++|+
T Consensus 412 d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~----~~g~~~l 487 (500)
T cd07083 412 DDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAK----TGGPHYL 487 (500)
T ss_pred CCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCc----ccCHHHH
Confidence 9999999999999999999999999999999999999999999874433 56899999999999 5 7899999
Q ss_pred hhceeEEEEEEC
Q 005131 680 EGLLTTRWILKG 691 (713)
Q Consensus 680 ~~~~~~k~v~~~ 691 (713)
++||+.|+|+..
T Consensus 488 ~~~~~~k~~~~~ 499 (500)
T cd07083 488 RRFLEMKAVAER 499 (500)
T ss_pred HHhhheeEEEEc
Confidence 999999999863
No 78
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=100.00 E-value=1e-73 Score=636.53 Aligned_cols=396 Identities=20% Similarity=0.224 Sum_probs=344.5
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+++++++++|+++ |+++|+++|.++|+++++.|++++++|++...+++|++.
T Consensus 4 ~~P~tg~~i~~~~~~~--------~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 72 (451)
T cd07146 4 RNPYTGEVVGTVPAGT--------EEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCL 72 (451)
T ss_pred cCCCCCCEEEEEcCCC--------HHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 4577899888876664 89999999998864 888999999999999999999999999988888887776
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcccccccccc--ccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQ--LADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
.++ ..|+..+++.+++++. .....++..+... ...+...+.+++|+|||++|+|| ||++++ ++
T Consensus 73 ~~a------------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~ 140 (451)
T cd07146 73 KDT------------RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHK 140 (451)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHH
Confidence 442 1688889999998886 3332222221110 01244567899999999999999 999985 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
++|||++||+||+|||+.+|+++..+.+++.++ |+|+|+||+++|+ .++++.|..||++|+|+||||+.+|++|++
T Consensus 141 ~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~a---glP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~ 217 (451)
T cd07146 141 IAPAIAANNRIVLKPSEKTPLSAIYLADLLYEA---GLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAA 217 (451)
T ss_pred HHHHHHcCCEEEEECCCCchHHHHHHHHHHHHc---CcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999 8999999999974 678899999999999999999999999998
Q ss_pred hc-CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 499 ST-KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 499 ~~-~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
.+ .+|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 218 ~a~~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 297 (451)
T cd07146 218 TAGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPA 297 (451)
T ss_pred HhcCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 65 5899999999999999999999999 567788888999999999999999999999999872
Q ss_pred -------------------HHHHhCCCEE-EcCCccccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHH
Q 005131 562 -------------------DNLRSEGVTL-YGGPRASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIH 614 (713)
Q Consensus 562 -------------------~~~~~~Ga~l-~gg~~~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N 614 (713)
++++++|+++ +||...+.|+. + ++|++++||+||||++|++|+|+||||+++|
T Consensus 298 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n 377 (451)
T cd07146 298 TDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISN 377 (451)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHh
Confidence 4566789998 77765555542 3 6889999999999999999999999999999
Q ss_pred ccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCC-CCCCCccCccceee-ccccCCCcccchHhhceeEEEEEE
Q 005131 615 QHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRF-CDGARFGLGAEVGI-STSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 615 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~-g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+++|||+++|||+|.+++.++++++++|+||||+++.. .+.+||||+|.||+ |+ ++|++|+++||+.|+|++
T Consensus 378 ~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~----~~g~~~~~~f~~~k~~~~ 451 (451)
T cd07146 378 STAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGK----EGVREAMKEMTNVKTYSL 451 (451)
T ss_pred CCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcc----cChHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999999987544 46799999999995 78 889999999999999863
No 79
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=100.00 E-value=1.3e-73 Score=638.71 Aligned_cols=396 Identities=19% Similarity=0.196 Sum_probs=345.1
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.||+.++++...+ .+|+++++++|++||+.|++++.++|.++|+++++.|++++++|++.+.+++|++..
T Consensus 2 ~P~t~~~~~~~~~~~--------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 73 (453)
T cd07099 2 NPATGEVLGEVPVTD--------PAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRA 73 (453)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 467888889887765 999999999999999999999999999999999999999999999888888887764
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcccc-ccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGH-ILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
+. ..|+..+++.+++++. ..+..+. .........+...+++++|+|||++|+|| ||++++ ++++
T Consensus 74 ~~------------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~ 141 (453)
T cd07099 74 DA------------GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDII 141 (453)
T ss_pred HH------------HHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 31 2577788888888876 3322211 11111001344678899999999999999 999885 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+|+.++++.|..| .+|+|+||||+++|+.|++.+
T Consensus 142 ~ALaaGN~vilKps~~~p~~~~~l~~~l~~a---g~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa 217 (453)
T cd07099 142 PALAAGNAVVLKPSEVTPLVGELLAEAWAAA---GPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAA 217 (453)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHHc---CCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 89999999999855677777776 599999999999999999865
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------------- 561 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------- 561 (713)
.+|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|+|||+++||+|+++|+
T Consensus 218 ~~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~ 297 (453)
T cd07099 218 ERLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDA 297 (453)
T ss_pred hcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 5899999999999999999999999 677788888999999999999999999999999872
Q ss_pred ------------------HHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005131 562 ------------------DNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGH 612 (713)
Q Consensus 562 ------------------~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~ 612 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||++
T Consensus 298 ~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07099 298 DIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIAL 377 (453)
T ss_pred cccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHH
Confidence 4556789998 787653 44542 3 78899999999999999999999999999
Q ss_pred HHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCC--CCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 613 IHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 613 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+|+++|||++||||+|.++++++++++++|.||||+++. ..+.+||||+|.||+|+ ++|++|+++||++|+|+
T Consensus 378 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~----~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 378 ANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGR----RHGAEGLREFCRPKAIA 452 (453)
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCc----cChHHHHHHhcceEEEe
Confidence 999999999999999999999999999999999998843 34789999999999998 89999999999999986
No 80
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=100.00 E-value=3e-74 Score=644.67 Aligned_cols=392 Identities=24% Similarity=0.324 Sum_probs=346.1
Q ss_pred HhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHh
Q 005131 267 VLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQE 346 (713)
Q Consensus 267 ~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~ 346 (713)
+.+|+.++++...+ .+|+++++++|++||+.|++++.++|.++|+++++.|++++++|+..+..++|++..+
T Consensus 14 P~t~~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 85 (462)
T PF00171_consen 14 PATGEVIGEVPSAT--------AEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPIAE 85 (462)
T ss_dssp TTTECEEEEEEEBS--------HHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHH
T ss_pred CCCcCEEEEEcCCC--------HHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccccccccc
Confidence 56899999988775 9999999999999999999999999999999999999999999998777777766644
Q ss_pred cCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHH-HHHHHHH
Q 005131 347 GYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDAL-VQIAALA 423 (713)
Q Consensus 347 ~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~~~~~A 423 (713)
+ ..|+..+++.+++++. .....++..+. ..+...++.++|+|||++|+|| ||+.+ .+++++|
T Consensus 86 a------------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A 150 (462)
T PF00171_consen 86 A------------RGEVDRAIDFLRYYADAARKLAGEVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPA 150 (462)
T ss_dssp H------------HHHHHHHHHHHHHHHHHHHHHTEEEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHH
T ss_pred c------------cchhhhhhhhhhhhhhcccceehhhccc---ccccccccccccccceeecccccccccccccchhhh
Confidence 2 2688889999999987 44433333332 2577889999999999999999 99998 5999999
Q ss_pred HHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc--
Q 005131 424 IRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST-- 500 (713)
Q Consensus 424 LaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~-- 500 (713)
|++||+||+|||+.+|.++.++++++.++ |+|+|++|+++| +.++++.|..||++++|+||||+++|++|++.+
T Consensus 151 LaaGN~VVlkps~~~~~~~~~l~~~~~~A---glP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~ 227 (462)
T PF00171_consen 151 LAAGNTVVLKPSEQAPLTALLLAELLEEA---GLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAK 227 (462)
T ss_dssp HHTT-EEEEEEBTTSHHHHHHHHHHHHHH---TSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHT
T ss_pred hcccccceeeeccccccccccchhhcccc---ccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccc
Confidence 99999999999999999999999999999 999999999998 578899999999999999999999999999875
Q ss_pred -CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH------------------
Q 005131 501 -KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL------------------ 560 (713)
Q Consensus 501 -~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l------------------ 560 (713)
++|+++|+|||||+||++|||+|.| ..++.++++|+||.|++++|||||+++||+|+++|
T Consensus 228 ~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~ 307 (462)
T PF00171_consen 228 NLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTD 307 (462)
T ss_dssp TTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCS
T ss_pred ccccccccccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCcccccc
Confidence 5999999999999999999999999 56777889999999999999999999999999987
Q ss_pred ----------------HHHHHhCCCEE-EcC------CccccccC------C-CCCCCccccccCceEEEEEeCCHHHHH
Q 005131 561 ----------------IDNLRSEGVTL-YGG------PRASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAI 610 (713)
Q Consensus 561 ----------------~~~~~~~Ga~l-~gg------~~~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi 610 (713)
+++++++|+++ +|| ...+.|+. + ++|++++||+||||++|++|+|+||||
T Consensus 308 ~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 387 (462)
T PF00171_consen 308 VGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAI 387 (462)
T ss_dssp BCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHH
T ss_pred ccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhh
Confidence 36677889998 888 22344442 3 799999999999999999999999999
Q ss_pred HHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCC-CCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 611 GHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDG-ARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 611 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~-~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
+++|+++|||+++|||+|.++++++++++++|+|+||+++..... +||||+|.||+|+ ++|++|+++||+.|+|
T Consensus 388 ~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~----~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 388 ALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGR----EGGPEGLDEFTQIKTV 462 (462)
T ss_dssp HHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESE----BSHHHHHHGTEEEEEE
T ss_pred hcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCc----chHHHHHHHhCCccCC
Confidence 999999999999999999999999999999999999999655443 6999999999999 8999999999999987
No 81
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=100.00 E-value=1.8e-73 Score=639.87 Aligned_cols=395 Identities=21% Similarity=0.210 Sum_probs=345.1
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRR--LQAMSSEDRKKILLDIADALEANEELIIEENEADVAA 342 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~ 342 (713)
.++.+|+.++.+...+ .+|+++|+++|++||+. |+++|.++|.++|++++++|++|+++|+.....++|+
T Consensus 19 ~~P~tg~~i~~~~~~~--------~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 90 (471)
T cd07139 19 VSPATEEVVGRVPEAT--------PADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGM 90 (471)
T ss_pred ECCCCCCEeEEEeCCC--------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Confidence 4567888888887664 89999999999999984 9999999999999999999999999999877777776
Q ss_pred HHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccc-cccccccccCCceeeeeeccceeEEEEecC-CchHHH-H
Q 005131 343 AEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIG-HILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-Q 418 (713)
Q Consensus 343 ~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~ 418 (713)
+..+.. ..|+..+++.+++++. ..+..+ ...+. ..+...+.+++|+|||++|+|| ||+.++ +
T Consensus 91 ~~~~~~-----------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~ 156 (471)
T cd07139 91 PISWSR-----------RAQGPGPAALLRYYAALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPWNAPLFLAAL 156 (471)
T ss_pred CHHHHH-----------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCCchHHHHHHH
Confidence 653210 1478888888998886 322211 11111 1244567899999999999999 999985 9
Q ss_pred HHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 419 IAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 419 ~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
++++||++||+||+|||+.+|+++..+.+++.++ |+|+|+||+|+|+.+.++.|..||++++|+||||+.+|+.|++
T Consensus 157 ~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a---glP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~ 233 (471)
T cd07139 157 KIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEA---GLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAA 233 (471)
T ss_pred HHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHc---CCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999999999 8999999999986667888989999999999999999999988
Q ss_pred hc---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-------------
Q 005131 499 ST---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------- 561 (713)
Q Consensus 499 ~~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------- 561 (713)
.+ .+|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 234 ~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 313 (471)
T cd07139 234 VCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLD 313 (471)
T ss_pred HHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCC
Confidence 64 4899999999999999999999999 677888899999999999999999999999999873
Q ss_pred ---------------------HHHHhCCCEE-EcCCcc-----ccccC------C-CCCCCccccccCceEEEEEeCCHH
Q 005131 562 ---------------------DNLRSEGVTL-YGGPRA-----SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 562 ---------------------~~~~~~Ga~l-~gg~~~-----~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|
T Consensus 314 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 393 (471)
T cd07139 314 PATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDED 393 (471)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHH
Confidence 3456679998 777532 33432 3 789999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
|||+++|+++|||+++|||+|.+++.++++++++|.|+||++. ..+.+||||+|.||+|+ ++|++|+++||+.|+
T Consensus 394 eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~----~~g~~~~~~ft~~k~ 468 (471)
T cd07139 394 DAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGR----EGGPEGLDAYLETKS 468 (471)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCc----cchHHHHHHHhceeE
Confidence 9999999999999999999999999999999999999999876 56789999999999998 889999999999999
Q ss_pred EE
Q 005131 688 IL 689 (713)
Q Consensus 688 v~ 689 (713)
|+
T Consensus 469 i~ 470 (471)
T cd07139 469 IY 470 (471)
T ss_pred Ee
Confidence 86
No 82
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=100.00 E-value=1.7e-73 Score=637.22 Aligned_cols=385 Identities=18% Similarity=0.208 Sum_probs=336.7
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+....+++|++.
T Consensus 42 ~nP~t~~~i~~~~~a~--------~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 113 (480)
T cd07111 42 INPATGEVLASVLQAE--------EEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPI 113 (480)
T ss_pred ECCCCCCEEEEEcCCC--------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4567888888876664 99999999999999999999999999999999999999999999976666666655
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAAL 422 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ 422 (713)
.+++ ..|+..+++.+++++...+... ..+..++|+|||++|+|| ||+.++ +++++
T Consensus 114 ~~a~-----------~~ev~~~~~~~~~~~~~~~~~~------------~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 170 (480)
T cd07111 114 RESR-----------DCDIPLVARHFYHHAGWAQLLD------------TELAGWKPVGVVGQIVPWNFPLLMLAWKICP 170 (480)
T ss_pred HHHH-----------HHHHHHHHHHHHHHHHHHHHhc------------CCcccceecceEEEECCCccHHHHHHHHHHH
Confidence 3311 1367777888877765222110 012467999999999999 999985 99999
Q ss_pred HHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc--
Q 005131 423 AIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST-- 500 (713)
Q Consensus 423 ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~-- 500 (713)
||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+|+.+++..|..||++|+|+||||+.+|+.|++.+
T Consensus 171 ALaaGN~VVlKps~~tp~~~~~l~~~~~~a---GlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~ 247 (480)
T cd07111 171 ALAMGNTVVLKPAEYTPLTALLFAEICAEA---GLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAG 247 (480)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHhc---CCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999 899999999998656788899999999999999999999998865
Q ss_pred -CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-----------------
Q 005131 501 -KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI----------------- 561 (713)
Q Consensus 501 -~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~----------------- 561 (713)
++|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|+|||+++||+|+++|+
T Consensus 248 ~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~ 327 (480)
T cd07111 248 TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAID 327 (480)
T ss_pred cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 5999999999999999999999999 667788888999999999999999999999999773
Q ss_pred -----------------HHHHhCCCEE-EcCCc---cccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHH
Q 005131 562 -----------------DNLRSEGVTL-YGGPR---ASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHI 613 (713)
Q Consensus 562 -----------------~~~~~~Ga~l-~gg~~---~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~ 613 (713)
++++++|+++ +||.. .+.|+. + ++|++++||+||||++|++|+|+||||+++
T Consensus 328 ~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~ 407 (480)
T cd07111 328 MGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALA 407 (480)
T ss_pred cccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHH
Confidence 4456678988 66643 234442 3 689999999999999999999999999999
Q ss_pred HccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 614 HQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 614 N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
|+++|||++||||+|.+++.++++++++|.|+||++....+.+||||+|.||+|+ ++|++|+++||+.|+
T Consensus 408 n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~~~~~k~ 477 (480)
T cd07111 408 NNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGR----EGGKEGLYEYLRPSW 477 (480)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCc----cchHHHHHHHhhccC
Confidence 9999999999999999999999999999999999987777789999999999999 899999999999885
No 83
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=100.00 E-value=2.3e-73 Score=631.76 Aligned_cols=379 Identities=22% Similarity=0.290 Sum_probs=332.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHH
Q 005131 291 GAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSV 370 (713)
Q Consensus 291 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l 370 (713)
|+++++++|++||+.|++++.++|+++|++++++|+++.++|++.+.+++|++..+. ..|+..+++.+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~------------~~ei~~~~~~l 68 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWA------------GFNVDLAAGML 68 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHH------------HHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999998888888775321 25788899999
Q ss_pred HHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 005131 371 RVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHK 447 (713)
Q Consensus 371 ~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~ 447 (713)
++++. .....+...+.. ..+...+.+++|+|||++|+|| ||+.++ +++++||++||+||+|||+.+|+++..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~ 146 (432)
T cd07105 69 REAASLITQIIGGSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGR 146 (432)
T ss_pred HHHHHHHHHhcCeecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHH
Confidence 99887 322112222211 1344567899999999999999 999984 999999999999999999999999999999
Q ss_pred HHHHhccccCCCCeEEEecCC----chhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCC
Q 005131 448 IITEVIPENVGERLIGLVTSR----EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSA 520 (713)
Q Consensus 448 ~~~~al~~glP~g~v~vv~g~----~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dA 520 (713)
++.++ |+|+|+||+|+|+ .++++.|..||+||+|+||||+.+|+.|++++ ++|+++|+|||||+||++||
T Consensus 147 ~~~~a---GlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~da 223 (432)
T cd07105 147 VFHEA---GLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDA 223 (432)
T ss_pred HHHHc---CcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCC
Confidence 99999 8999999999963 24688899999999999999999999999864 59999999999999999999
Q ss_pred CHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHH-----------------------------HHHhCCCE
Q 005131 521 DMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELID-----------------------------NLRSEGVT 570 (713)
Q Consensus 521 Dl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~-----------------------------~~~~~Ga~ 570 (713)
|++.| ..+++++|+|+||.|++++|+|||+++||+|+++|++ +++++|++
T Consensus 224 dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~gp~i~~~~~~~~~~~i~~a~~~ga~ 303 (432)
T cd07105 224 DLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSKGAK 303 (432)
T ss_pred CHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCCCCcccccCCHHHHHHHHHHHHHHHHCCCE
Confidence 99999 5678888999999999999999999999999998743 34567898
Q ss_pred E-EcCCcc----cccc-C-----C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhc
Q 005131 571 L-YGGPRA----SSLL-N-----I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQ 638 (713)
Q Consensus 571 l-~gg~~~----~~~~-~-----v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~ 638 (713)
+ +||... +.|+ + + ++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+++++++++
T Consensus 304 ~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~ 383 (432)
T cd07105 304 LVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKR 383 (432)
T ss_pred EEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence 8 777643 3444 2 3 6889999999999999999999999999999999999999999999999999999
Q ss_pred cCeeeEEEcCCCCC-CCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 639 VDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 639 l~~G~v~iN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+++|.||||+++.. .+.+||||+|.||+|+ ++|++|+++||+.|+|++
T Consensus 384 l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G~----~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 384 IESGAVHINGMTVHDEPTLPHGGVKSSGYGR----FNGKWGIDEFTETKWITI 432 (432)
T ss_pred CCcCeEEECCCCCCCCCCCCCCCcccccccc----cChHHHHHHhhceEEEeC
Confidence 99999999998544 5789999999999999 889999999999999863
No 84
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=100.00 E-value=3.6e-73 Score=636.52 Aligned_cols=403 Identities=19% Similarity=0.213 Sum_probs=344.4
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.||+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++....++|++..
T Consensus 2 ~P~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 73 (465)
T cd07098 2 DPATGQHLGSVPADT--------PEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMV 73 (465)
T ss_pred CCCCCCeeEEeeCCC--------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 456899999887764 999999999999999999999999999999999999999999999888777777654
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcccc-ccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGH-ILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAA 421 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~ 421 (713)
++. ..|+..+++.+++++. ....... .........+...+++++|+|||++|+|| ||+.++ ++++
T Consensus 74 ~a~-----------~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~ 142 (465)
T cd07098 74 DAS-----------LGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPII 142 (465)
T ss_pred HHH-----------HHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHH
Confidence 311 1467777777777765 2211111 11110001123456789999999999999 999885 9999
Q ss_pred HHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccc-cCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc
Q 005131 422 LAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPE-NVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST 500 (713)
Q Consensus 422 ~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~-glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~ 500 (713)
+||++||+||+|||+.+|+++..+++++.++|.+ |+|+|+||+|+|+.++++.|..||+|++|.||||+++|+.|++.+
T Consensus 143 ~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a 222 (465)
T cd07098 143 AALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAA 222 (465)
T ss_pred HHHHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999998877654 699999999998657889999999999999999999999999864
Q ss_pred ---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 501 ---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 501 ---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
++|+++|+|||||+||++|||++.| ..+++++++++||.|++++|||||+++||+|+++|+
T Consensus 223 ~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~ 302 (465)
T cd07098 223 AESLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGD 302 (465)
T ss_pred HhcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 5999999999999999999999999 567777788999999999999999999999999884
Q ss_pred -------------------HHHHhCCCEE-EcCCcc-------ccccC------C-CCCCCccccccCceEEEEEeCCHH
Q 005131 562 -------------------DNLRSEGVTL-YGGPRA-------SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 562 -------------------~~~~~~Ga~l-~gg~~~-------~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
++++++|+++ +||... +.|+. + ++|++++||+||||++|++|+|+|
T Consensus 303 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 382 (465)
T cd07098 303 VDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDE 382 (465)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHH
Confidence 3456789998 776431 34442 3 678999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCC-C-CCCCCCccCccceeeccccCCCcccchHhhceeE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNAST-R-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 685 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~-~-~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~ 685 (713)
|||+++|+++|||+++|||+|.+++.++++++++|.|+||++. . ..+.+||||+|.||+|+ ++|++|+++||++
T Consensus 383 eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~----~~g~~~~~~~~~~ 458 (465)
T cd07098 383 EAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGR----FAGEEGLRGLCNP 458 (465)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCc----cChHHHHHHhhee
Confidence 9999999999999999999999999999999999999999864 3 34789999999999999 8999999999999
Q ss_pred EEEEEC
Q 005131 686 RWILKG 691 (713)
Q Consensus 686 k~v~~~ 691 (713)
|+|+++
T Consensus 459 k~~~~~ 464 (465)
T cd07098 459 KSVTED 464 (465)
T ss_pred EEEEEe
Confidence 999864
No 85
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=100.00 E-value=4.1e-73 Score=641.15 Aligned_cols=400 Identities=21% Similarity=0.215 Sum_probs=345.9
Q ss_pred hHHHHhc-CCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHH
Q 005131 263 NILKVLQ-GERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVA 341 (713)
Q Consensus 263 ~l~~~~t-ge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~ 341 (713)
.+.++.+ |+.++++...+ .+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+..+.+++|
T Consensus 49 ~v~~P~t~g~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G 120 (518)
T cd07125 49 PVIDPADHERTIGEVSLAD--------AEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIALAAAEAG 120 (518)
T ss_pred EEECCCCCCceEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Confidence 3467888 88888888775 99999999999999999999999999999999999999999999988888888
Q ss_pred HHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccc-cccccccCCceeeeeeccceeEEEEecC-CchHHH-
Q 005131 342 AAEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHI-LKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV- 417 (713)
Q Consensus 342 ~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~- 417 (713)
++..++ ..|+..+++.+++++. ..+..+.. .+. +.+...+.+++|+|||++|+|| ||+.++
T Consensus 121 k~~~~a------------~~ev~~~i~~l~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~ 185 (518)
T cd07125 121 KTLADA------------DAEVREAIDFCRYYAAQARELFSDPELPG---PTGELNGLELHGRGVFVCISPWNFPLAIFT 185 (518)
T ss_pred CCHHHH------------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceeEEEEecccEEEEECCcchHHHHHH
Confidence 776442 1577778888888876 33322221 111 1245567899999999999999 999985
Q ss_pred HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHH
Q 005131 418 QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQI 496 (713)
Q Consensus 418 ~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i 496 (713)
+++++||++||+||+|||+.+|+++..+++++.++ |+|+|+||+|+|+ +++++.|..||++|+|+||||+++|++|
T Consensus 186 ~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~ea---GlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i 262 (518)
T cd07125 186 GQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEA---GVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLI 262 (518)
T ss_pred HHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHc---CCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999 8999999999975 4588999999999999999999999999
Q ss_pred HHhc------CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH--------
Q 005131 497 KEST------KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-------- 561 (713)
Q Consensus 497 ~~~~------~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-------- 561 (713)
++.+ .+|+++|+|||||+||++|||++.| ..+++++|+|+||.|+|++|||||+++||+|+++|+
T Consensus 263 ~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 342 (518)
T cd07125 263 NRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKV 342 (518)
T ss_pred HHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCc
Confidence 8863 5899999999999999999999999 567788899999999999999999999999999883
Q ss_pred --------------------------HHHHhCCCEE-EcCCcc---ccccC--C---CCCCCccccccCceEEEEEeC--
Q 005131 562 --------------------------DNLRSEGVTL-YGGPRA---SSLLN--I---PEPNSFHHEYNSMACTIEIVD-- 604 (713)
Q Consensus 562 --------------------------~~~~~~Ga~l-~gg~~~---~~~~~--v---~~~~~~~eE~FgPvl~v~~~~-- 604 (713)
+++++ ++++ +||... +.|+. | .+|++++||+||||++|++|+
T Consensus 343 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v~~~i~~eE~FgPVl~v~~~~~~ 421 (518)
T cd07125 343 GDPWDLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIVGIFDLTTEVFGPILHVIRFKAE 421 (518)
T ss_pred cCCCCCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeecCChHhhCcccCCeEEEEEeCCC
Confidence 22333 4566 676542 34442 1 289999999999999999999
Q ss_pred CHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCC--CCCCCccCccceeeccccCCCcccchHhhc
Q 005131 605 DVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGL 682 (713)
Q Consensus 605 ~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~ 682 (713)
|+||||+++|+++|||++||||+|.+++.++++++++|.|+||+++.. .+.+||||+|.||+|+. ++|++|+++|
T Consensus 422 ~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~---~gg~~~~~~f 498 (518)
T cd07125 422 DLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPK---AGGPNYLLRF 498 (518)
T ss_pred CHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcc---cccHHHHHHh
Confidence 999999999999999999999999999999999999999999988543 36799999999999951 6889999999
Q ss_pred eeEEEEEECC
Q 005131 683 LTTRWILKGS 692 (713)
Q Consensus 683 ~~~k~v~~~~ 692 (713)
|+.|+|+++.
T Consensus 499 t~~k~i~~~~ 508 (518)
T cd07125 499 GNEKTVSLNT 508 (518)
T ss_pred cceEEEEEEc
Confidence 9999998854
No 86
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=100.00 E-value=3.5e-73 Score=641.10 Aligned_cols=396 Identities=20% Similarity=0.232 Sum_probs=343.4
Q ss_pred HHHHh-cCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHH
Q 005131 264 ILKVL-QGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAA 342 (713)
Q Consensus 264 l~~~~-tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~ 342 (713)
+.++. +|+.++++...+ .+|+++++++|++||+.|++++.++|.++|++++++|++++++|+....+++|+
T Consensus 54 ~~~P~~t~~~i~~~~~a~--------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 125 (514)
T PRK03137 54 SINPANKSEVVGRVSKAT--------KELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGK 125 (514)
T ss_pred eECCCCCCceEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCC
Confidence 35777 588888887775 999999999999999999999999999999999999999999999877777777
Q ss_pred HHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcc-ccccccccccCCceeeeeeccceeEEEEecC-CchHHH-H
Q 005131 343 AEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPI-GHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-Q 418 (713)
Q Consensus 343 ~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~-~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~ 418 (713)
+..++ ..|+..+++.+++++. ..+.. +..... ..+...+.+++|+|||++|+|| ||+.++ +
T Consensus 126 ~~~~a------------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 190 (514)
T PRK03137 126 PWAEA------------DADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAG 190 (514)
T ss_pred CHHHH------------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHH
Confidence 66442 1578888888888886 32221 111111 1344678899999999999999 999985 9
Q ss_pred HHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHH
Q 005131 419 IAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIK 497 (713)
Q Consensus 419 ~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 497 (713)
+++|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+| +.++++.|..||+|++|+||||+.+|+.|+
T Consensus 191 ~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~a---GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~ 267 (514)
T PRK03137 191 MTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEA---GLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIY 267 (514)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh---CCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHH
Confidence 9999999999999999999999999999999999 899999999997 467889999999999999999999999998
Q ss_pred Hhc---------CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHH-----
Q 005131 498 EST---------KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELID----- 562 (713)
Q Consensus 498 ~~~---------~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~----- 562 (713)
+.+ .||+++|||||||+||++|||++.| ..++++++.|+||.|++++|+|||+++||+|+++|++
T Consensus 268 ~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l 347 (514)
T PRK03137 268 ERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKEL 347 (514)
T ss_pred HHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhC
Confidence 764 3799999999999999999999999 5677777889999999999999999999999998843
Q ss_pred ----------------------------HHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEe
Q 005131 563 ----------------------------NLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIV 603 (713)
Q Consensus 563 ----------------------------~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~ 603 (713)
+++++ +++ +||... +.|+. + ++|++++||+||||++|++|
T Consensus 348 ~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 426 (514)
T PRK03137 348 TVGNPEDNAYMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKA 426 (514)
T ss_pred CCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEec
Confidence 33344 466 777542 34442 3 78999999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCC-CC-CCCCCccCccceeec-cccCCCcccchHh
Q 005131 604 DDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNAST-RF-CDGARFGLGAEVGIS-TSRIHARGPVGVE 680 (713)
Q Consensus 604 ~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~-~~-~~~~pfGG~k~SG~g-~~~~~~~g~~~l~ 680 (713)
+|++|||+++|+++|||++||||+|.+++.++++++++|+|+||+.. .. .+.+||||+|.||+| + ++|++|++
T Consensus 427 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~----~gg~~~l~ 502 (514)
T PRK03137 427 KDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSK----AGGPDYLL 502 (514)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcc----cCCHHHHH
Confidence 99999999999999999999999999999999999999999999864 33 356899999999999 6 78999999
Q ss_pred hceeEEEEEE
Q 005131 681 GLLTTRWILK 690 (713)
Q Consensus 681 ~~~~~k~v~~ 690 (713)
+||+.|+|+.
T Consensus 503 ~ft~~k~v~~ 512 (514)
T PRK03137 503 LFLQAKTVSE 512 (514)
T ss_pred HhceEEEEEE
Confidence 9999999975
No 87
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=100.00 E-value=3.7e-73 Score=634.67 Aligned_cols=394 Identities=18% Similarity=0.203 Sum_probs=345.1
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.||+.++.+...+ .+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++...+++|++..
T Consensus 3 ~P~t~~~i~~~~~~~--------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~ 74 (450)
T cd07092 3 DPATGEEIATVPDAS--------AADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLH 74 (450)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 567899999887665 999999999999999999999999999999999999999999999888888887764
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhcc-cCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLANM-EDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAAL 422 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ 422 (713)
+.. ..|+..+++.+++++.. ....+...... ..+...+.+++|+|||++|+|| ||++++ +++++
T Consensus 75 ~~~-----------~~ev~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ 141 (450)
T cd07092 75 LVR-----------DDELPGAVDNFRFFAGAARTLEGPAAGEY--LPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAP 141 (450)
T ss_pred HHH-----------HHHHHHHHHHHHHHHHHHHHhcCcccCcc--CCCceeEEEEeccceEEEECCCCcHHHHHHHHHHH
Confidence 310 14788899999988863 22222111111 1234567899999999999999 999985 99999
Q ss_pred HHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 423 AIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 423 ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
||++||+||+|||+.+|.++..+.++|.+ |+|+|++|+|+|. +++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 142 AL~aGN~VIlKps~~~~~~~~~l~~~~~~----glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~ 217 (450)
T cd07092 142 ALAAGNTVVLKPSETTPLTTLLLAELAAE----VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAA 217 (450)
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHh----cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999976 7899999999974 55788899999999999999999999999875
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------------- 561 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------- 561 (713)
++|+++|+|||||+||++|||++.| ..+++++++|+||.|++++|+|||+++||+|+++|+
T Consensus 218 ~~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 297 (450)
T cd07092 218 DTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDT 297 (450)
T ss_pred hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCC
Confidence 5999999999999999999999999 667788899999999999999999999999999883
Q ss_pred ------------------HHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005131 562 ------------------DNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGH 612 (713)
Q Consensus 562 ------------------~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~ 612 (713)
+++. +|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||++
T Consensus 298 ~~gpli~~~~~~~i~~~i~~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~ 376 (450)
T cd07092 298 EMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIEL 376 (450)
T ss_pred ccCcccCHHHHHHHHHHHHHHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHH
Confidence 2333 58888 787642 33442 3 68999999999999999999999999999
Q ss_pred HHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 613 IHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 613 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+|+++|||++||||+|.+++.++++++++|.|+||++....+.+||||+|.||+|+ ++|++|+++||+.|+|+
T Consensus 377 ~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~----~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 377 ANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGK----DLSIYALEDYTRIKHVM 449 (450)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCC----CChHHHHHHHheeeEEe
Confidence 99999999999999999999999999999999999987777889999999999999 88999999999999986
No 88
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=5.8e-73 Score=634.25 Aligned_cols=398 Identities=20% Similarity=0.286 Sum_probs=346.1
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAE 344 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~ 344 (713)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|+++++.|++++++|+.....++|++.
T Consensus 4 ~~P~tg~~~~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 75 (453)
T cd07149 4 ISPYDGEVIGRVPVAS--------EEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPI 75 (453)
T ss_pred cCCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCH
Confidence 3567889888877765 99999999999999999999999999999999999999999999977777777666
Q ss_pred HhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccc--cCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 345 QEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQL--ADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 345 ~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
.++ ..|+..+++.+++++. .....++..+.... ..+...+.+++|+|||++|+|| ||+.++ ++
T Consensus 76 ~~a------------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~ 143 (453)
T cd07149 76 KDA------------RKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHK 143 (453)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHH
Confidence 442 1577788888887765 32322222211100 1233467889999999999999 999885 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
+++||++||+||+|||+.+|.++.++.+++.++ |+|+|++|+|+|+ .++++.|..||++|+|+||||+++|+.|++
T Consensus 144 ~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~a---g~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 220 (453)
T cd07149 144 VGPAIAAGNAVVLKPASQTPLSALKLAELLLEA---GLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIAR 220 (453)
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc---CcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999 8999999999974 566888999999999999999999999998
Q ss_pred hc-CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------
Q 005131 499 ST-KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------- 561 (713)
Q Consensus 499 ~~-~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------- 561 (713)
.+ .+|+++|+|||||+||++|||++.| ..+++++++++||.|++++|+|||++++|+|+++|+
T Consensus 221 ~a~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~ 300 (453)
T cd07149 221 KAGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDED 300 (453)
T ss_pred HcCCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCC
Confidence 76 5899999999999999999999999 667888899999999999999999999999999884
Q ss_pred -------------------HHHHhCCCEE-EcCCccccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHH
Q 005131 562 -------------------DNLRSEGVTL-YGGPRASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIH 614 (713)
Q Consensus 562 -------------------~~~~~~Ga~l-~gg~~~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N 614 (713)
++++.+|+++ +||...+.|+. + ++|++++||+||||++|++|+|+||||+++|
T Consensus 301 ~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 380 (453)
T cd07149 301 TDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMAN 380 (453)
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHh
Confidence 3345678888 78766555542 3 6789999999999999999999999999999
Q ss_pred ccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCC-CCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 615 QHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 615 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+++|||++||||+|.+++.++++++++|.||||+++.. .+.+||||+|+||+|+ ++|++|+++||+.|+|+
T Consensus 381 ~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 381 DSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGR----EGPRYAIEEMTEIKLVC 452 (453)
T ss_pred CCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCC----CChHHHHHHhhceeEEe
Confidence 99999999999999999999999999999999988543 4789999999999999 88999999999999986
No 89
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=100.00 E-value=4.2e-73 Score=626.82 Aligned_cols=379 Identities=20% Similarity=0.213 Sum_probs=322.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHH
Q 005131 294 EMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVL 373 (713)
Q Consensus 294 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~ 373 (713)
+.+++|++||+.|+++|+.+|+++|++++++|++++++|++.+..+.|++..++. ..|+..+++.++++
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-----------~~ev~~~~~~~~~~ 70 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAY-----------MTEIGFVLSEINYA 70 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-----------HHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999877777777764421 14778888888888
Q ss_pred hc-ccCcccc-ccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 005131 374 AN-MEDPIGH-ILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKII 449 (713)
Q Consensus 374 a~-~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~ 449 (713)
+. .....+. ..+......+...++.++|+|||++|+|| ||++++ ++++|||++||+||+|||+.+|.++..+++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~ 150 (449)
T cd07136 71 IKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKII 150 (449)
T ss_pred HHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHH
Confidence 76 3222211 11111001244578899999999999999 999985 99999999999999999999999999999999
Q ss_pred HHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCCCHHHH-
Q 005131 450 TEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSADMDMA- 525 (713)
Q Consensus 450 ~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dADl~~A- 525 (713)
.++ +|+|++|+|+|+.+.+..|.+|+ ||+|+||||+++|+.|++++ .+|+++|||||||+||++|||+|.|
T Consensus 151 ~~a----lP~gv~~~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa 225 (449)
T cd07136 151 EET----FDEEYVAVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAA 225 (449)
T ss_pred HHh----CCCCEEEEEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHH
Confidence 987 67779999998655677677665 99999999999999999875 5999999999999999999999999
Q ss_pred HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHH-----------------------------HhCCCEE-EcCC
Q 005131 526 KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNL-----------------------------RSEGVTL-YGGP 575 (713)
Q Consensus 526 ~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~-----------------------------~~~Ga~l-~gg~ 575 (713)
..+++++++|+||.|++++|+|||+++||+|+++|++.+ ++. +++ +||.
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~-a~~~~gG~ 304 (449)
T cd07136 226 KRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDN-GKIVFGGN 304 (449)
T ss_pred HHHHHHHHcccCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhc-ceEEECCC
Confidence 556677788999999999999999999999999985433 222 355 7775
Q ss_pred cc--ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEE
Q 005131 576 RA--SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFH 646 (713)
Q Consensus 576 ~~--~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~i 646 (713)
.. +.|+. + ++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|..++.++++++++|+|||
T Consensus 305 ~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~v 384 (449)
T cd07136 305 TDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCI 384 (449)
T ss_pred cCCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 43 44542 3 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC--CCCCCCccCccceeeccccCCCcccchHhhceeEEEEEECCC
Q 005131 647 NASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGSG 693 (713)
Q Consensus 647 N~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~~ 693 (713)
|+.+. ..+.+||||+|.||+|+ ++|++|+++||+.|+|+++..
T Consensus 385 N~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~v~~~~~ 429 (449)
T cd07136 385 NDTIMHLANPYLPFGGVGNSGMGS----YHGKYSFDTFSHKKSILKKST 429 (449)
T ss_pred CCccccccCCCCCccCcCcccCCc----ccCHHHHHHhccceEEEEcCC
Confidence 98753 33789999999999999 899999999999999998743
No 90
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=100.00 E-value=4.6e-73 Score=634.26 Aligned_cols=396 Identities=21% Similarity=0.248 Sum_probs=347.7
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSR--RLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
++.||+.++++...+ .+|+++++++|++|+. .|+++|.++|.++|++++++|.+++++|+....+++|++
T Consensus 3 ~P~tg~~i~~~~~~~--------~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 74 (457)
T cd07114 3 NPATGEPWARVPEAS--------AADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKL 74 (457)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 567899999887775 8999999999999997 599999999999999999999999999998777777766
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhcc-cCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLANM-EDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIA 420 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~ 420 (713)
..+. ..|++.+++.+++++.. ....+...+.. ..+...+.+++|+|||++|+|| ||+.++ +++
T Consensus 75 ~~~~------------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~ 140 (457)
T cd07114 75 IRET------------RAQVRYLAEWYRYYAGLADKIEGAVIPVD--KGDYLNFTRREPLGVVAAITPWNSPLLLLAKKL 140 (457)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEEecceEEEEECCCccHHHHHHHHH
Confidence 5331 26888899999988762 22222221110 1345678899999999999999 999985 999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
++||++||+||+|||+.+|.++..++++|.++ |+|+|+||+|+| ..++++.|..|+++++|+||||+.+|+++++.
T Consensus 141 ~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~a---glP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~ 217 (457)
T cd07114 141 APALAAGNTVVLKPSEHTPASTLELAKLAEEA---GFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARA 217 (457)
T ss_pred HHHHhcCCeEEeECCccchHHHHHHHHHHHHc---CcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999 899999999997 45688989999999999999999999999987
Q ss_pred c---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH--------------
Q 005131 500 T---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-------------- 561 (713)
Q Consensus 500 ~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-------------- 561 (713)
+ .+|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|+|||++++|+|+++|+
T Consensus 218 aa~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~ 297 (457)
T cd07114 218 AAENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDP 297 (457)
T ss_pred HHhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 5 5999999999999999999999999 667788888999999999999999999999999884
Q ss_pred --------------------HHHHhCCCEE-EcCCcc-------ccccC------C-CCCCCccccccCceEEEEEeCCH
Q 005131 562 --------------------DNLRSEGVTL-YGGPRA-------SSLLN------I-PEPNSFHHEYNSMACTIEIVDDV 606 (713)
Q Consensus 562 --------------------~~~~~~Ga~l-~gg~~~-------~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~ 606 (713)
++++++|+++ +||... +.|+. + +++++++||+||||++|++|+|+
T Consensus 298 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 377 (457)
T cd07114 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDE 377 (457)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCH
Confidence 2345679988 787542 34442 3 68999999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEE
Q 005131 607 HAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 686 (713)
Q Consensus 607 ~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k 686 (713)
||||+++|+++|||++||||+|.+.++++++++++|.|+||+++...+.+||||+|.||+|+ ++|++|+++||++|
T Consensus 378 deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~f~~~k 453 (457)
T cd07114 378 EEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGR----ENGIEAIREYTQTK 453 (457)
T ss_pred HHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCc----cchHHHHHHHhcee
Confidence 99999999999999999999999999999999999999999987777889999999999999 88999999999999
Q ss_pred EEEE
Q 005131 687 WILK 690 (713)
Q Consensus 687 ~v~~ 690 (713)
++++
T Consensus 454 ~~~~ 457 (457)
T cd07114 454 SVWI 457 (457)
T ss_pred EEeC
Confidence 9863
No 91
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=100.00 E-value=3.6e-73 Score=628.09 Aligned_cols=375 Identities=18% Similarity=0.165 Sum_probs=326.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHH
Q 005131 291 GAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSV 370 (713)
Q Consensus 291 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l 370 (713)
|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++...+++|++..++ ..|+..+++.+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea------------~~ev~~~~~~~ 68 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEA------------QTEVAAMAGKI 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH------------HHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999988777777776442 15788888888
Q ss_pred HHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 005131 371 RVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHK 447 (713)
Q Consensus 371 ~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~ 447 (713)
++++. ..+..+..... ..+...++.++|+|||++|+|| ||++++ ++++|||++||+||+|||+.+|+++..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~ 145 (431)
T cd07095 69 DISIKAYHERTGERATP---MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVE 145 (431)
T ss_pred HHHHHHHHHhcCCcccC---CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHH
Confidence 87775 32222221111 1244678899999999999999 999985 999999999999999999999999999999
Q ss_pred HHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc----CCCeEEecCccceEEEcCCCCHH
Q 005131 448 IITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST----KIPVLGHADGICHIYVDKSADMD 523 (713)
Q Consensus 448 ~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~----~~~v~lElgG~~p~iV~~dADl~ 523 (713)
++.++ |+|+|++|+|+|+.+.++.|..||++|+|+||||+++|+.|++.+ .+|++||+|||||+||++|||++
T Consensus 146 ~~~~a---g~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~ 222 (431)
T cd07095 146 LWEEA---GLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADID 222 (431)
T ss_pred HHHHh---CcChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHH
Confidence 99999 899999999998666789999999999999999999999998863 48899999999999999999999
Q ss_pred HH-HHHHHHccCCCCCccccCceEEEcCC-CchhHHHHH----------------------------------HHHHHhC
Q 005131 524 MA-KQIVLDAKVDYPAACNAMETLLIHQD-LVPTGFNEL----------------------------------IDNLRSE 567 (713)
Q Consensus 524 ~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~-i~d~fi~~l----------------------------------~~~~~~~ 567 (713)
.| ..+++++++|+||.|++++|+|||++ +||+|+++| +++++++
T Consensus 223 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ 302 (431)
T cd07095 223 AAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLAL 302 (431)
T ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhc
Confidence 99 56777888999999999999999999 999999987 2556678
Q ss_pred CCEE-EcCCc---cccccC-----C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHh
Q 005131 568 GVTL-YGGPR---ASSLLN-----I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLR 637 (713)
Q Consensus 568 Ga~l-~gg~~---~~~~~~-----v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~ 637 (713)
|+++ +||.. .+.|+. + ++|++++||+||||++|++|+|++|||+++|+++|||++||||+|..++.++++
T Consensus 303 ga~~l~gg~~~~~~g~~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~ 382 (431)
T cd07095 303 GGEPLLAMERLVAGTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLA 382 (431)
T ss_pred CCEEEeCCCcCCCCCeEEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHH
Confidence 9998 77743 234542 3 579999999999999999999999999999999999999999999999999999
Q ss_pred ccCeeeEEEcCCCC-CCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 638 QVDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 638 ~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
++++|.|+||+++. ..+.+||||+|+||+|+ ++|++|++ |++.|++
T Consensus 383 ~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~-~~~~~~~ 429 (431)
T cd07095 383 RIRAGIVNWNRPTTGASSTAPFGGVGLSGNHR----PSAYYAAD-YCAYPVA 429 (431)
T ss_pred hCCcceEEECCCCCCCCCCCCCCCcccccCCC----CChHHHHH-HHhhhhc
Confidence 99999999998754 44679999999999999 99999999 5555544
No 92
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=100.00 E-value=1.1e-72 Score=624.05 Aligned_cols=381 Identities=21% Similarity=0.212 Sum_probs=325.4
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHH
Q 005131 288 NEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLA 367 (713)
Q Consensus 288 t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~ 367 (713)
+.+|+++|+++|++||+.|++++.++|.++|+++++.|++++++|++.+.+++|+++.+.. ..|+..++
T Consensus 3 ~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~-----------~~ev~~~~ 71 (436)
T cd07135 3 PLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETL-----------LTEVSGVK 71 (436)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh-----------HHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999888888865421 14777788
Q ss_pred HHHHHHhc-ccCccc-ccccc-ccccCCceeeeeeccceeEEEEecC-CchHH-HHHHHHHHHhCCEEEEeCCCCchHHH
Q 005131 368 NSVRVLAN-MEDPIG-HILKK-TQLADGLFLEKTSCPLGVLLIVFES-RPDAL-VQIAALAIRSGNGLLLKGGKEAKRSN 442 (713)
Q Consensus 368 ~~l~~~a~-~~~~~~-~~~~~-~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~~~~~ALaaGN~vv~Kps~~~~~~~ 442 (713)
+.+++++. ...... +.... .....+...++.++|+|||++|+|| ||+++ .++++|||++||+||+|||+.+|.++
T Consensus 72 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~ 151 (436)
T cd07135 72 NDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTA 151 (436)
T ss_pred HHHHHHHHHHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHH
Confidence 88888876 322111 11110 0000133567899999999999999 99987 59999999999999999999999999
Q ss_pred HHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcC
Q 005131 443 AILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDK 518 (713)
Q Consensus 443 ~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~ 518 (713)
..+++++++. +|+|++|+|+|. +++++ |..|| +|.|+||||+.+|+.|++.+ .+|+++|+|||||+||++
T Consensus 152 ~~l~~l~~~~----lP~g~v~vv~g~~~~~~~-l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~ 225 (436)
T cd07135 152 ALLAELVPKY----LDPDAFQVVQGGVPETTA-LLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTK 225 (436)
T ss_pred HHHHHHHHHh----CCcCEEEEEcCCchhHHH-HHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECC
Confidence 9999999874 778899999974 55555 66678 99999999999999998864 599999999999999999
Q ss_pred CCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHH-----------------------------H-hC
Q 005131 519 SADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNL-----------------------------R-SE 567 (713)
Q Consensus 519 dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~-----------------------------~-~~ 567 (713)
|||++.| ..+++++++|+||.|++++|||||+++||+|+++|++.+ + +.
T Consensus 226 dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~a 305 (436)
T cd07135 226 NADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTT 305 (436)
T ss_pred CCCHHHHHHHHHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhc
Confidence 9999999 567778888999999999999999999999999885432 1 12
Q ss_pred CCEE-EcCCcc--ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHh
Q 005131 568 GVTL-YGGPRA--SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLR 637 (713)
Q Consensus 568 Ga~l-~gg~~~--~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~ 637 (713)
|+++ +||... +.|+. + ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|..++.++++
T Consensus 306 g~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~ 385 (436)
T cd07135 306 KGKVVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILT 385 (436)
T ss_pred CCeEEECCCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHh
Confidence 6777 777543 34442 3 688999999999999999999999999999999999999999999999999999
Q ss_pred ccCeeeEEEcCCCC--CCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 638 QVDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 638 ~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
++++|.|+||+.+. ..+.+||||+|.||+|+ ++|++|+++||+.|+|.
T Consensus 386 ~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 386 RTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGA----YHGKYGFDTFTHERTVV 435 (436)
T ss_pred cCCcCeEEECCccccccCCCCCcCCcCcccCCc----cccHhHHHHhccccccc
Confidence 99999999998753 34789999999999999 89999999999999874
No 93
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=100.00 E-value=1.1e-72 Score=623.28 Aligned_cols=374 Identities=22% Similarity=0.256 Sum_probs=319.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHH
Q 005131 294 EMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVL 373 (713)
Q Consensus 294 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~ 373 (713)
+++++|++||+.|+.++..+|.++|++++++|++++++|++.+.+++|++..++. ..|+..+++.++++
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-----------~~ev~~~~~~~~~~ 71 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESF-----------RDEVSVLVSSCKLA 71 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-----------HHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999888888887764421 13777788888877
Q ss_pred hc-ccCccccc---cccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 005131 374 AN-MEDPIGHI---LKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHK 447 (713)
Q Consensus 374 a~-~~~~~~~~---~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~ 447 (713)
+. ..+..+.. .+.. ..+...+++++|+|||++|+|| ||++++ ++++|||++||+||+|||+.+|.++.++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~ 149 (432)
T cd07137 72 IKELKKWMAPEKVKTPLT--TFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAK 149 (432)
T ss_pred HHHHHHHhCCcccCCCcc--cCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHH
Confidence 76 22211110 1110 1123467799999999999999 999985 999999999999999999999999999999
Q ss_pred HHHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCCCHHH
Q 005131 448 IITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSADMDM 524 (713)
Q Consensus 448 ~~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dADl~~ 524 (713)
+|.++ +|+|++|+|+|+.+.++.|..| .+|+|+||||+++|++|++.+ ++|+++|+|||||+||++|||++.
T Consensus 150 ~~~~~----~P~gvv~~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~ 224 (432)
T cd07137 150 LIPEY----LDTKAIKVIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKV 224 (432)
T ss_pred HHHHh----CCcCeEEEEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHH
Confidence 99886 6777999999865667777666 699999999999999998875 599999999999999999999999
Q ss_pred HH-HHHHHcc-CCCCCccccCceEEEcCCCchhHHHHHHH---------------------------------HHHhCCC
Q 005131 525 AK-QIVLDAK-VDYPAACNAMETLLIHQDLVPTGFNELID---------------------------------NLRSEGV 569 (713)
Q Consensus 525 A~-~~~~~~~-~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~---------------------------------~~~~~Ga 569 (713)
|+ .+++++| +|+||.|++++|+|||+++||+|+++|++ ++++ |+
T Consensus 225 aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~-ga 303 (432)
T cd07137 225 AVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSV-AD 303 (432)
T ss_pred HHHHHHHHhhhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHh-CC
Confidence 95 5556666 48999999999999999999999998843 2333 67
Q ss_pred EE-EcCCcc--ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc
Q 005131 570 TL-YGGPRA--SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV 639 (713)
Q Consensus 570 ~l-~gg~~~--~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l 639 (713)
++ +||... +.|+. + ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++
T Consensus 304 ~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l 383 (432)
T cd07137 304 KIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAET 383 (432)
T ss_pred eEEeCCCcCCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhC
Confidence 77 777542 44442 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEEEcCCCC--CCCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 640 DSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 640 ~~G~v~iN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
++|.||||+++. ..+.+||||+|.||+|+ ++|.+++++||+.|+|++
T Consensus 384 ~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~f~~~k~v~~ 432 (432)
T cd07137 384 SSGGVTFNDTVVQYAIDTLPFGGVGESGFGA----YHGKFSFDAFSHKKAVLY 432 (432)
T ss_pred CcCcEEECCccccccCCCCCCCCcCcCcCCc----cccHHHHHHhccCceeeC
Confidence 999999998754 34789999999999999 899999999999999863
No 94
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=100.00 E-value=1.4e-72 Score=630.39 Aligned_cols=395 Identities=19% Similarity=0.216 Sum_probs=348.3
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+.....+++++..
T Consensus 3 ~P~tg~~i~~~~~~~--------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 74 (451)
T cd07103 3 NPATGEVIGEVPDAG--------AADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLA 74 (451)
T ss_pred CCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 467889888887765 999999999999999999999999999999999999999999999877777777664
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAAL 422 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ 422 (713)
+. ..|+..+++.+++++. ..+..+...+.. ..+...+.+++|+|||++|+|| ||++++ +++++
T Consensus 75 ~a------------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ 140 (451)
T cd07103 75 EA------------RGEVDYAASFLEWFAEEARRIYGRTIPSP--APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAP 140 (451)
T ss_pred HH------------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCcceEEEEeeceEEEEECCCchHHHHHHHHHHH
Confidence 42 1588888899988876 333333222211 1345678899999999999999 999885 99999
Q ss_pred HHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 423 AIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 423 ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
||++||+||+|||+.+|.++..++++|.++ |+|+|+||+|+|. .+.++.|..||++|+|+||||+.+|+.|++.+
T Consensus 141 AL~aGN~VIlKps~~~~~~~~~l~~~l~~a---glP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa 217 (451)
T cd07103 141 ALAAGCTVVLKPAEETPLSALALAELAEEA---GLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA 217 (451)
T ss_pred HHHcCCEEEEECCccCcHHHHHHHHHHHHc---CCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH
Confidence 999999999999999999999999999998 8999999999974 56788888899999999999999999998864
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------------- 561 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------- 561 (713)
.+|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|||||++++|+|+++|+
T Consensus 218 ~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 297 (451)
T cd07103 218 DTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGT 297 (451)
T ss_pred hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 5999999999999999999999999 667788888999999999999999999999999773
Q ss_pred ------------------HHHHhCCCEE-EcCCcc---ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005131 562 ------------------DNLRSEGVTL-YGGPRA---SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGH 612 (713)
Q Consensus 562 ------------------~~~~~~Ga~l-~gg~~~---~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~ 612 (713)
++++++|+++ +||... +.|+. + ++++++++|+||||++|++|+|+||||++
T Consensus 298 ~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 377 (451)
T cd07103 298 DMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIAR 377 (451)
T ss_pred CCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHH
Confidence 4456689998 777543 34442 3 68899999999999999999999999999
Q ss_pred HHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 613 IHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 613 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+|+++|||+++|||+|.++++++++++++|.|+||+++...+.+||||+|+||+|+ ++|++|+++||++|+|+
T Consensus 378 ~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~----~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 378 ANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGR----EGGKEGLEEYLETKYVS 450 (451)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCc----cchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999997667789999999999998 88999999999999985
No 95
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=100.00 E-value=1.9e-72 Score=647.02 Aligned_cols=395 Identities=17% Similarity=0.179 Sum_probs=335.0
Q ss_pred HHHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHH
Q 005131 264 ILKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARES-SRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAA 342 (713)
Q Consensus 264 l~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~ 342 (713)
+.++.+|+.++.+... + +|+++|+++|++| |+.|+++|+.+|+++|++++++|++++++|+. ..++.|+
T Consensus 19 v~nP~tg~~i~~~~~~--------~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK 88 (663)
T TIGR02278 19 VRDASTGEVLARVTSE--------G-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGA 88 (663)
T ss_pred ccCCCCCCEEEEEcCC--------c-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCC
Confidence 3457788988886654 3 4999999999996 99999999999999999999999999999997 3566666
Q ss_pred HHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCc--------cccccccccccCCceeeeeeccc-eeEEEEecC-
Q 005131 343 AEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDP--------IGHILKKTQLADGLFLEKTSCPL-GVLLIVFES- 411 (713)
Q Consensus 343 ~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~--------~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~- 411 (713)
+..++ ..|+..+++.+++|+. ..+. .++..+.. ...+...++.|+|+ |||++|+||
T Consensus 89 ~~~~a------------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~P~~Gvv~~I~pwN 155 (663)
T TIGR02278 89 TRRDN------------WVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLS-KDGSFQGRHILTPKGGVAVQINAFN 155 (663)
T ss_pred CHHHH------------HHHHHHHHHHHHHHHHhhhhhccccccccCCceeccC-CCCccceEEEEEeCCceEEEEcCCc
Confidence 65331 1689999999999987 3321 12222211 01123467899998 999999999
Q ss_pred CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhcccc-CCCCeEEEecCCchhHHhhhcCCCccEEEecCC
Q 005131 412 RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPEN-VGERLIGLVTSREEIPDLLKLDDVIDLVIPRGS 489 (713)
Q Consensus 412 ~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~g-lP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs 489 (713)
||++++ ++++|||++||+||+|||+.+|+++.++++++.++ | +|+|+||+|+|. .++++..++.+|+|+||||
T Consensus 156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~a---G~lP~gv~~~v~g~--~~~~~~~~~~~~~V~FTGS 230 (663)
T TIGR02278 156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVES---GLLPEGSLQLICGS--AGDLLDHLDHRDVVAFTGS 230 (663)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh---CCCCCCcEEEEeCC--hHHHHhcCCCCCEEEEECC
Confidence 999985 99999999999999999999999999999999999 9 999999999984 2344544577899999999
Q ss_pred HHHHHHHHHh-----cCCCeEEecCccceEEEcCCCC-----HHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHH
Q 005131 490 NRLVSQIKES-----TKIPVLGHADGICHIYVDKSAD-----MDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFN 558 (713)
Q Consensus 490 ~~~g~~i~~~-----~~~~v~lElgG~~p~iV~~dAD-----l~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~ 558 (713)
+++|++|++. ..+|+++|||||||+||++||| ++.| ..+++++|+|+||.|+|++|||||+++||+|++
T Consensus 231 ~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~ 310 (663)
T TIGR02278 231 AATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLK 310 (663)
T ss_pred HHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHH
Confidence 9999999984 2599999999999999999999 9999 667788889999999999999999999999999
Q ss_pred HH----------------------------------HHHHHhCCCEE-EcCCcc--ccccC------C-CCC-CCccccc
Q 005131 559 EL----------------------------------IDNLRSEGVTL-YGGPRA--SSLLN------I-PEP-NSFHHEY 593 (713)
Q Consensus 559 ~l----------------------------------~~~~~~~Ga~l-~gg~~~--~~~~~------v-~~~-~~~~eE~ 593 (713)
+| +++++++|+++ +||... +.|+. + ++| ++++||+
T Consensus 311 ~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~ 390 (663)
T TIGR02278 311 ALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEA 390 (663)
T ss_pred HHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccc
Confidence 87 35677889998 888543 45552 3 455 6899999
Q ss_pred cCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc--CeeeEEE-cCC-------C-CCCCCCCccCcc
Q 005131 594 NSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV--DSAAVFH-NAS-------T-RFCDGARFGLGA 662 (713)
Q Consensus 594 FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l--~~G~v~i-N~~-------~-~~~~~~pfGG~k 662 (713)
||||++|++|+|+||||+++|+++|||++||||+|..++.++++++ ++|.||| |.. . ...+.+||||+|
T Consensus 391 FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k 470 (663)
T TIGR02278 391 FGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPG 470 (663)
T ss_pred cCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999 8999999 641 1 223678999999
Q ss_pred ceeeccccCCC-cccchHhhceeEEEEEE
Q 005131 663 EVGISTSRIHA-RGPVGVEGLLTTRWILK 690 (713)
Q Consensus 663 ~SG~g~~~~~~-~g~~~l~~~~~~k~v~~ 690 (713)
+||+|+ + +|.+++++|++.|+|..
T Consensus 471 ~SG~G~----~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 471 RAGGGE----ELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred cCcCCC----ccchHHHHHHhceeEEEEc
Confidence 999998 7 56899999999999975
No 96
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=100.00 E-value=2.2e-72 Score=625.71 Aligned_cols=379 Identities=21% Similarity=0.263 Sum_probs=333.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHH
Q 005131 291 GAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSV 370 (713)
Q Consensus 291 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l 370 (713)
|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+....+++|++..++ ..|+..+++.+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~------------~~ei~~~~~~l 68 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKA------------AFEVGAAIAIL 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH------------HHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999988888888765442 25888888889
Q ss_pred HHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHH-HHHHH
Q 005131 371 RVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRS-NAILH 446 (713)
Q Consensus 371 ~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~-~~~l~ 446 (713)
++++. ..+..+...+.. ..+...+.+++|+|||++|+|| ||+.++ +++++||++||+||+|||+.+|.+ +..+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~ 146 (431)
T cd07104 69 REAAGLPRRPEGEILPSD--VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIA 146 (431)
T ss_pred HHHHHHHHHhcCccccCC--CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHH
Confidence 88876 333333222211 1345678899999999999999 999985 999999999999999999999998 56899
Q ss_pred HHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCCCH
Q 005131 447 KIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSADM 522 (713)
Q Consensus 447 ~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dADl 522 (713)
+++.++ |+|+|++|+|+|. .++++.|..||++|+|+||||+.+|+.|++++ .+|+++|+|||||+||++|||+
T Consensus 147 ~~l~~a---GlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl 223 (431)
T cd07104 147 EIFEEA---GLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADL 223 (431)
T ss_pred HHHHHc---CCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCH
Confidence 999999 8999999999974 56888899999999999999999999998764 5999999999999999999999
Q ss_pred HHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------------------------HHHHhC
Q 005131 523 DMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI----------------------------------DNLRSE 567 (713)
Q Consensus 523 ~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~----------------------------------~~~~~~ 567 (713)
+.| ..+++++++|+||.|++++|||||++++|+|+++|+ ++++++
T Consensus 224 ~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~ 303 (431)
T cd07104 224 DLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAA 303 (431)
T ss_pred HHHHHHHHHHHHhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHC
Confidence 999 567778889999999999999999999999999873 355668
Q ss_pred CCEE-EcCCccccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc
Q 005131 568 GVTL-YGGPRASSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV 639 (713)
Q Consensus 568 Ga~l-~gg~~~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l 639 (713)
|+++ +||...+.|+. + +++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++
T Consensus 304 G~~~~~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l 383 (431)
T cd07104 304 GARLLTGGTYEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERL 383 (431)
T ss_pred CCEEEeCCCCCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhc
Confidence 9988 77765555542 3 67899999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEEEcCCCCC-CCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 640 DSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 640 ~~G~v~iN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
++|.|+||+++.. .+.+||||+|.||+|+ ++|++|+++||+.|+|++
T Consensus 384 ~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~----~~g~~~l~~~~~~k~~~~ 431 (431)
T cd07104 384 ETGMVHINDQTVNDEPHVPFGGVKASGGGR----FGGPASLEEFTEWQWITV 431 (431)
T ss_pred CcCeEEECCCCCCCCCCCCCCCcccccCCc----cchHHHHHHhhceeEEeC
Confidence 9999999998644 4789999999999998 889999999999999863
No 97
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=100.00 E-value=2.5e-72 Score=630.99 Aligned_cols=400 Identities=22% Similarity=0.237 Sum_probs=349.4
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAM-SSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
.++.+|+.++.+...+ .+|+++++++|++||+.|+++ +.++|.++|++++++|++++++|++.+.+++|++
T Consensus 21 ~~P~tg~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~ 92 (473)
T cd07082 21 YSPIDGEVIGSVPALS--------ALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKT 92 (473)
T ss_pred ECCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 4567888888877764 899999999999999999998 9999999999999999999999999888888887
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccc--cCCceeeeeeccceeEEEEecC-CchHH-HH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQL--ADGLFLEKTSCPLGVLLIVFES-RPDAL-VQ 418 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~ 418 (713)
..++ ..|+..+++.++++++ ..+..+...+.... ..+...+.+++|+|||++|+|| ||+.+ .+
T Consensus 93 ~~~a------------~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 160 (473)
T cd07082 93 LKDA------------LKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVS 160 (473)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHH
Confidence 7542 1477888888888876 33322322221110 1345667899999999999999 99987 49
Q ss_pred HHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHH
Q 005131 419 IAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIK 497 (713)
Q Consensus 419 ~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 497 (713)
++++||++||+||+|||+.+|.++.++.+++.++ |+|+|++|+++|. .++++.|..||++|+|+||||+++|+.|+
T Consensus 161 ~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~a---glp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 161 KLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDA---GFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHc---CCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999 8999999999974 56788898899999999999999999999
Q ss_pred Hhc-CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH--------------
Q 005131 498 EST-KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-------------- 561 (713)
Q Consensus 498 ~~~-~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-------------- 561 (713)
+.+ .+|+++|+|||||+||++|||++.| ..+++++++++||.|++++|||||++++|+|+++|+
T Consensus 238 ~~a~~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~ 317 (473)
T cd07082 238 KQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDN 317 (473)
T ss_pred HHhCCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 886 7999999999999999999999999 667788888999999999999999999999999873
Q ss_pred --------------------HHHHhCCCEE-EcCCcc-ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005131 562 --------------------DNLRSEGVTL-YGGPRA-SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGH 612 (713)
Q Consensus 562 --------------------~~~~~~Ga~l-~gg~~~-~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~ 612 (713)
++++.+|+++ +||... +.|+. + ++|++++||+||||++|++|+|++|||++
T Consensus 318 ~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~ 397 (473)
T cd07082 318 GVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIEL 397 (473)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHH
Confidence 3456679988 777654 44442 3 67899999999999999999999999999
Q ss_pred HHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCC-CCCCCCccCccceeeccccCCCcccchHhhceeEEEEEEC
Q 005131 613 IHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKG 691 (713)
Q Consensus 613 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~ 691 (713)
+|+++|||++||||+|.+++.++++++++|+||||+++. ..+.+||||+|.||+|+ ++|.+|+++||+.|+|+++
T Consensus 398 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~----~~g~~~l~~~~~~k~i~~~ 473 (473)
T cd07082 398 ANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGT----QGIGDALRSMTRRKGIVIN 473 (473)
T ss_pred HhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCC----CChHHHHHHhhceeEEEEC
Confidence 999999999999999999999999999999999999854 34578999999999999 8899999999999999763
No 98
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=100.00 E-value=1.4e-72 Score=630.90 Aligned_cols=390 Identities=18% Similarity=0.203 Sum_probs=329.7
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARES-SRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
+++.||+.++++... .+|+++|+++|++| |+.|+++|+++|+++|++++++|++++++|++. .++.|++
T Consensus 20 ~nP~tg~~~~~~~~~---------~~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp 89 (513)
T cd07128 20 HDAVTGEVVARVSSE---------GLDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGAT 89 (513)
T ss_pred ECCCCCCEEEEEcCC---------HHHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCC
Confidence 456788888887542 47999999999997 799999999999999999999999999999974 6677766
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcc--------ccccccccccCC-ceeeeeecc-ceeEEEEecC-
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPI--------GHILKKTQLADG-LFLEKTSCP-LGVLLIVFES- 411 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~--------~~~~~~~~~~~~-~~~~~~~~P-~GVv~~I~p~- 411 (713)
..++ ..|+..+++.+++|++ ..+.. ++..+.. ..+ ...+++++| +|||++|+||
T Consensus 90 ~~ea------------~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~pwN 155 (513)
T cd07128 90 RRDS------------WIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLS--KDGTFVGQHILTPRRGVAVHINAFN 155 (513)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHhhccccccccCCcccccC--CCccccceEEEEecccEEEEECCcc
Confidence 5442 1588899999999987 33222 1111111 112 234678999 5999999999
Q ss_pred CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhcccc-CCCCeEEEecCC-chhHHhhhcCCCccEEEecC
Q 005131 412 RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPEN-VGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRG 488 (713)
Q Consensus 412 ~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~g-lP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTG 488 (713)
||++++ ++++|||++||+||+|||+.+|+++..+++++.++ | +|+|+||+|+|+ .++++.| +.+|+|+|||
T Consensus 156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea---G~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTG 229 (513)
T cd07128 156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVES---GLLPEGALQLICGSVGDLLDHL---GEQDVVAFTG 229 (513)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHh---CCCCCCcEEEecCChHHHhccc---CCCCEEEEEC
Confidence 999985 99999999999999999999999999999999999 9 899999999974 3344433 5789999999
Q ss_pred CHHHHHHHHHhc-----CCCeEEecCccceEEEcCCCC-----HHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHH
Q 005131 489 SNRLVSQIKEST-----KIPVLGHADGICHIYVDKSAD-----MDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGF 557 (713)
Q Consensus 489 s~~~g~~i~~~~-----~~~v~lElgG~~p~iV~~dAD-----l~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi 557 (713)
|+++|++|++.+ .+|+++|||||||+||++||| ++.| ..+++++|.|+||.|++++|+|||+++||+|+
T Consensus 230 S~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~ 309 (513)
T cd07128 230 SAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVI 309 (513)
T ss_pred CHHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHH
Confidence 999999999862 599999999999999999999 9999 56778888899999999999999999999999
Q ss_pred HHH----------------------------------HHHHHhCCCEE-EcCCc----------cccccC------C-C-
Q 005131 558 NEL----------------------------------IDNLRSEGVTL-YGGPR----------ASSLLN------I-P- 584 (713)
Q Consensus 558 ~~l----------------------------------~~~~~~~Ga~l-~gg~~----------~~~~~~------v-~- 584 (713)
++| +++++++ +++ +||.. .+.|+. + +
T Consensus 310 ~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~ 388 (513)
T cd07128 310 EALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPD 388 (513)
T ss_pred HHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCc
Confidence 987 2556666 888 78753 134542 2 3
Q ss_pred -CCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccC--eeeEEEcCCC---------CC
Q 005131 585 -EPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVD--SAAVFHNAST---------RF 652 (713)
Q Consensus 585 -~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~--~G~v~iN~~~---------~~ 652 (713)
+|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++ +|+||||+.+ ..
T Consensus 389 ~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~ 468 (513)
T cd07128 389 AATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSP 468 (513)
T ss_pred ccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCC
Confidence 37899999999999999999999999999999999999999999999999999997 9999999863 12
Q ss_pred CCCCCccCccceeeccccCCC-cccchHhhceeEEEEE
Q 005131 653 CDGARFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWIL 689 (713)
Q Consensus 653 ~~~~pfGG~k~SG~g~~~~~~-~g~~~l~~~~~~k~v~ 689 (713)
.+.+||||+|.||+|+ + +|.+|+++|++.|+|.
T Consensus 469 ~~~~pfGG~k~SG~G~----~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 469 LPQLVHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCCCCCcccCCCCc----ccccHHHHHHhheeeeee
Confidence 4678999999999999 7 5799999999999986
No 99
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=100.00 E-value=2.5e-72 Score=621.97 Aligned_cols=376 Identities=18% Similarity=0.194 Sum_probs=322.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH-HHhcCchhhHhHhhcCHHHHHHHHHHHHH
Q 005131 294 EMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA-EQEGYEKPLLSRLALKSGKISSLANSVRV 372 (713)
Q Consensus 294 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~ev~~~~~~l~~ 372 (713)
+.+++|++||+.|+++|+.+|.++|+++++.|++|+++|++.+.+++|+. ..++ . ..|+...++.+++
T Consensus 2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea----~-------~~ev~~~i~~~~~ 70 (434)
T cd07133 2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHET----L-------LAEILPSIAGIKH 70 (434)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHH----H-------HHHHHHHHHHHHH
Confidence 36788999999999999999999999999999999999999888888863 2221 0 1477778888888
Q ss_pred Hhc-ccCcccccc-ccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHH
Q 005131 373 LAN-MEDPIGHIL-KKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKI 448 (713)
Q Consensus 373 ~a~-~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~ 448 (713)
++. ..+..+... .......+...+++++|+|||++|+|| ||+.++ ++++|||++||+||+|||+.+|.++..++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l 150 (434)
T cd07133 71 ARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAEL 150 (434)
T ss_pred HHHHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHH
Confidence 775 222121111 000001233467899999999999999 999885 9999999999999999999999999999999
Q ss_pred HHHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCCCHHHH
Q 005131 449 ITEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSADMDMA 525 (713)
Q Consensus 449 ~~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dADl~~A 525 (713)
|.++ +|+|+||+|+|+.++++.|.+|+ +|+|+||||+.+|+.|++.+ ++|+++|+|||||+||++|||++.|
T Consensus 151 ~~~a----lP~g~~~~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~a 225 (434)
T cd07133 151 LAEY----FDEDEVAVVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKA 225 (434)
T ss_pred HHHh----CCcCeEEEEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHH
Confidence 9987 67779999998766788888766 99999999999999999875 5999999999999999999999999
Q ss_pred -HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH--------------------------------HHHHhCCCEE-
Q 005131 526 -KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------------------------DNLRSEGVTL- 571 (713)
Q Consensus 526 -~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------------------------~~~~~~Ga~l- 571 (713)
..+++++++|+||.|++++|+|||+++||+|+++|+ ++++++|+++
T Consensus 226 a~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~ 305 (434)
T cd07133 226 AERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVI 305 (434)
T ss_pred HHHHHHHHhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 667788888999999999999999999999999873 3456689998
Q ss_pred EcCCcc-----ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc
Q 005131 572 YGGPRA-----SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV 639 (713)
Q Consensus 572 ~gg~~~-----~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l 639 (713)
+||... +.|+. + ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++
T Consensus 306 ~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l 385 (434)
T cd07133 306 ELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRT 385 (434)
T ss_pred ecCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 677542 34542 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEEEcCCC--CCCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 640 DSAAVFHNAST--RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 640 ~~G~v~iN~~~--~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
++|.|+||+++ ...+.+||||+|.||+|+ ++|++|+++||+.|+|+
T Consensus 386 ~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 386 HSGGVTINDTLLHVAQDDLPFGGVGASGMGA----YHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CcceEEECCcccccCCCCCCcCCCCcccCCC----cCCHHHHHHhcccceec
Confidence 99999999875 344789999999999999 88999999999999985
No 100
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=100.00 E-value=3.7e-72 Score=627.46 Aligned_cols=396 Identities=20% Similarity=0.201 Sum_probs=346.9
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++.+|+.++.+...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+..+.+++|++..
T Consensus 3 ~P~t~~~i~~~~~~~--------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 74 (455)
T cd07093 3 NPATGEVLAKVPEGG--------AAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPIT 74 (455)
T ss_pred CCCCCCEEEEEcCCC--------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 467889989876664 999999999999999999999999999999999999999999999888888877664
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAAL 422 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ 422 (713)
+.. ..|+..+++.+++++. .....+..... ..+...+.+++|+|||++|+|| ||+.++ +++++
T Consensus 75 ~~~-----------~~ev~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ 140 (455)
T cd07093 75 LAR-----------TRDIPRAAANFRFFADYILQLDGESYPQ---DGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAP 140 (455)
T ss_pred HHH-----------HHHHHHHHHHHHHHHHhHHHhCCccccC---CCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHH
Confidence 311 1477888888888876 22222121111 2355677899999999999999 999985 99999
Q ss_pred HHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 423 AIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 423 ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
||++||+||+|||+.+|.++..+.++|.++ |+|+|+||+++| +.++++.|..||++|+|+||||+.+|+.|++++
T Consensus 141 AL~aGN~VIlkps~~~p~~~~~l~~~l~~a---glP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa 217 (455)
T cd07093 141 ALAFGNTVVLKPSEWTPLTAWLLAELANEA---GLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAA 217 (455)
T ss_pred HHhcCCEEEeECCCcCcHHHHHHHHHHHhc---CCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHh
Confidence 999999999999999999999999999999 899999999997 466888899999999999999999999999875
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------------- 561 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------- 561 (713)
++|+++|+|||||+||++|||++.| ..+++++++++||.|++++|||||++++|+|+++|+
T Consensus 218 ~~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 297 (455)
T cd07093 218 PNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297 (455)
T ss_pred hcccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 5999999999999999999999999 567778888999999999999999999999999873
Q ss_pred ------------------HHHHhCCCEE-EcCCcc-------ccccC------C-CCCCCccccccCceEEEEEeCCHHH
Q 005131 562 ------------------DNLRSEGVTL-YGGPRA-------SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 562 ------------------~~~~~~Ga~l-~gg~~~-------~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
++++++|+++ +||... +.|+. + +++++++||+||||++|++|+|+||
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 377 (455)
T cd07093 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEE 377 (455)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHH
Confidence 3456679988 777542 33432 3 6899999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+ ++|++|+++|++.|++
T Consensus 378 ai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~----~~g~~~~~~~~~~k~~ 453 (455)
T cd07093 378 AIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGR----EGGDYSLEFYTELKNV 453 (455)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCC----CchHHHHHHHhceeEE
Confidence 999999999999999999999999999999999999999987667789999999999999 8899999999999998
Q ss_pred EE
Q 005131 689 LK 690 (713)
Q Consensus 689 ~~ 690 (713)
++
T Consensus 454 ~~ 455 (455)
T cd07093 454 CI 455 (455)
T ss_pred eC
Confidence 63
No 101
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=100.00 E-value=9.6e-72 Score=605.49 Aligned_cols=387 Identities=42% Similarity=0.721 Sum_probs=334.4
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhcccC
Q 005131 299 ARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVLANMED 378 (713)
Q Consensus 299 A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~~~~ 378 (713)
|++||+.|+++|.++|.++|++++++|++|+++|+..+.+|+..++..|.+..+.+++..+..|++.+++.+++|+...+
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999987777777766665545667777777899999999999998444
Q ss_pred ccccccccccccCCceeeeeeccceeEEEEecCCchHHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhcc-ccC
Q 005131 379 PIGHILKKTQLADGLFLEKTSCPLGVLLIVFESRPDALVQIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIP-ENV 457 (713)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~~P~~~~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~-~gl 457 (713)
..++..+.....++...+++++|+|||++|+||+|....++++|||++||+||+|||+.||+++..++++++++|. .|+
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGl 160 (398)
T TIGR00407 81 PVGKVIDGRELDSGLTLERVRVPLGVLGVIYEARPNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGL 160 (398)
T ss_pred CCcccccceecCCCceEEEEEeCcEEEEEEeCCCchHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCC
Confidence 4554433211124667889999999999999997755469999999999999999999999999999999887753 369
Q ss_pred CCCeEEEecC-C-chhHHhhhcCCCccEEEecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCCCHHHHHH-HHHHccC
Q 005131 458 GERLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSADMDMAKQ-IVLDAKV 534 (713)
Q Consensus 458 P~g~v~vv~g-~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dADl~~A~~-~~~~~~~ 534 (713)
|+|+||+|+| + ++++++|..||+||+|+||||+.+|+.+++...+|+++|+|||||+||++|||++.|++ +++++|
T Consensus 161 P~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~- 239 (398)
T TIGR00407 161 PVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTSTIPVLGHGDGICHIYLDESADLIKAIKVIVNAKT- 239 (398)
T ss_pred ChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhCCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhc-
Confidence 9999999996 4 45899999999999999999999999999887899999999999999999999999955 555555
Q ss_pred CCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCcccccc-----CC--CCCCCccccccCceEEEEEeCCHH
Q 005131 535 DYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLL-----NI--PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 535 ~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~-----~v--~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
++||.|++++|+|||+++||+|+++|++.+.+.+..+........++ .+ .+|++++||+||||++|++|+|+|
T Consensus 240 ~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~~~~~~~~i~~~v~~g~~tv~~~~~~i~~eE~FgPvl~v~~~~~~~ 319 (398)
T TIGR00407 240 QRPSTCNAIETLLVNKAIAREFLPVLENQLLEKGVTIHADAYALKLLELGPATEAIVCKTDFDKEFLSLDLSVKIVESLE 319 (398)
T ss_pred CCCCcccccceEEEeHHHHHHHHHHHHHHHHhcCCEEecCHHHHHHHhccCccccccccccccchhhCceeEEEEECCHH
Confidence 56999999999999999999999999998887665442111100111 11 358999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 686 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k 686 (713)
|||+++|+++|||++||||+|.+++++|++++++|.|+||+++...+..|||-..+-|++.+|.|.+|+.+++.||+.|
T Consensus 320 eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 320 AAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred HHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 9999999999999999999999999999999999999999998888889999989999999999999999999999876
No 102
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=100.00 E-value=4.5e-72 Score=627.35 Aligned_cols=384 Identities=16% Similarity=0.202 Sum_probs=336.1
Q ss_pred hHHHHhcC-CcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHH
Q 005131 263 NILKVLQG-ERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVA 341 (713)
Q Consensus 263 ~l~~~~tg-e~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~ 341 (713)
.+.++.|+ +.++++...+ .+|+++|+++|++||+.|+++|..+|+++|++++++|++++++|+....+++|
T Consensus 54 ~~~nP~t~~e~i~~~~~~~--------~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 125 (500)
T TIGR01238 54 PVTNPADRRDIVGQVFHAN--------LAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREAG 125 (500)
T ss_pred EeeCCCCCCeEEEEEeCCC--------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcC
Confidence 34577775 6888877664 99999999999999999999999999999999999999999999988877777
Q ss_pred HHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhcc-cCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-H
Q 005131 342 AAEQEGYEKPLLSRLALKSGKISSLANSVRVLANM-EDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-Q 418 (713)
Q Consensus 342 ~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~ 418 (713)
++..++ ..|+..+++.+++|+.. .+..+ ...++|+|||++|+|| ||+.++ +
T Consensus 126 k~~~~a------------~~ev~~~i~~l~~~a~~~~~~~~--------------~~~~~P~GVV~~I~pwN~P~~~~~~ 179 (500)
T TIGR01238 126 KTIHNA------------IAEVREAVDFCRYYAKQVRDVLG--------------EFSVESRGVFVCISPWNFPLAIFTG 179 (500)
T ss_pred CCHHHH------------HHHHHHHHHHHHHHHHHHHHhcC--------------ceeccCcceEEEECCCchHHHHHHH
Confidence 776442 26899999999999873 22111 1368999999999999 999985 9
Q ss_pred HHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHH
Q 005131 419 IAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIK 497 (713)
Q Consensus 419 ~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 497 (713)
++++||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+|. .++++.|..||++|+|+||||+.+|+.|+
T Consensus 180 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~a---GlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~ 256 (500)
T TIGR01238 180 QISAALAAGNTVIAKPAEQTSLIAYRAVELMQEA---GFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLIN 256 (500)
T ss_pred HHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHc---CCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999 8999999999974 57889999999999999999999999999
Q ss_pred Hhc---C---CCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------
Q 005131 498 EST---K---IPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------- 561 (713)
Q Consensus 498 ~~~---~---~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------- 561 (713)
+.+ . +|+++|+|||||+||++|||++.| ..+++++|+|+||.|++++|||||+++||+|+++|+
T Consensus 257 ~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG 336 (500)
T TIGR01238 257 QTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVG 336 (500)
T ss_pred HHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCC
Confidence 864 2 799999999999999999999999 667788888999999999999999999999999883
Q ss_pred -------------------------HHHHhCCCEEE-cCC---c---cccccC-----CCCCCCccccccCceEEEEEeC
Q 005131 562 -------------------------DNLRSEGVTLY-GGP---R---ASSLLN-----IPEPNSFHHEYNSMACTIEIVD 604 (713)
Q Consensus 562 -------------------------~~~~~~Ga~l~-gg~---~---~~~~~~-----v~~~~~~~eE~FgPvl~v~~~~ 604 (713)
+++++.|+++. ++. . .+.|+. .++|.+++||+||||++|++|+
T Consensus 337 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~~~~~~~~eE~FgPvl~v~~~~ 416 (500)
T TIGR01238 337 VPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFELDDIAELSEEVFGPVLHVVRYK 416 (500)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEccCCchHhhCCCcCCEEEEEEeC
Confidence 45566788874 211 1 244542 2688899999999999999998
Q ss_pred --CHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCC--CCCCCccCccceeec-cccCCCcccchH
Q 005131 605 --DVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRF--CDGARFGLGAEVGIS-TSRIHARGPVGV 679 (713)
Q Consensus 605 --~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~g-~~~~~~~g~~~l 679 (713)
++||||+++|+++|||++||||+|.+++.++++++++|.|+||+.... .+.+||||+|+||+| + ++|++++
T Consensus 417 ~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~----~gg~~~~ 492 (500)
T TIGR01238 417 ARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPK----AGGPHYL 492 (500)
T ss_pred CCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCc----cCCHHHH
Confidence 799999999999999999999999999999999999999999987533 255899999999999 7 8999999
Q ss_pred hhceeEEE
Q 005131 680 EGLLTTRW 687 (713)
Q Consensus 680 ~~~~~~k~ 687 (713)
++|++.|+
T Consensus 493 ~~~~~~k~ 500 (500)
T TIGR01238 493 YRLTQVQY 500 (500)
T ss_pred HHHHhhcC
Confidence 99999874
No 103
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=100.00 E-value=1.1e-71 Score=618.84 Aligned_cols=380 Identities=16% Similarity=0.158 Sum_probs=322.3
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHH--hcCCHHHH----HHHHHHHHHHHHHc--HHHHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRL--QAMSSEDR----KKILLDIADALEAN--EELIIEEN 336 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w--~~~~~~~R----~~~L~~~a~~l~~~--~~~l~~~~ 336 (713)
.++.+|+.++++...+ .+|+++|+++|++||+.| +.++..+| .++|+++++.|+++ .++|++..
T Consensus 17 ~nP~t~~~i~~~~~a~--------~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~ 88 (489)
T cd07126 17 LDPLNGDKFISVPDTD--------EDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLI 88 (489)
T ss_pred eCCCCCCEEEEEeCCC--------HHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4577899999877765 999999999999999988 55779999 89999999999998 48999766
Q ss_pred hhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-Cch
Q 005131 337 EADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPD 414 (713)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~ 414 (713)
.++.|++..+. ..||..+++.+++|++ ..+..+..........+...+++|+|+|||++|+|| ||+
T Consensus 89 ~~e~GK~~~~a------------~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~ 156 (489)
T cd07126 89 QRVAPKSDAQA------------LGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPL 156 (489)
T ss_pred HHHcCCCHHHH------------HHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHH
Confidence 66666665331 2789999999999997 333333221100001244678899999999999999 999
Q ss_pred HHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHH
Q 005131 415 ALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRL 492 (713)
Q Consensus 415 ~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~ 492 (713)
+++ ++++|||++||+||+|||+.+|+++..|++++.++ |+|+|+||+|+|. ++.+. +..|+++|+|+||||+++
T Consensus 157 ~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~a---GlP~gv~~vv~G~~~~~~~-l~~~~~v~~V~FTGS~~v 232 (489)
T cd07126 157 EIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLC---GMPATDVDLIHSDGPTMNK-ILLEANPRMTLFTGSSKV 232 (489)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHh---CcCcCcEEEEeCCchhHHH-HhcCCCCCEEEEECCHHH
Confidence 885 99999999999999999999999999999999999 8999999999984 44444 666899999999999999
Q ss_pred HHHHHHhcCCCeEEecCccceEEEcCCC-CHHHH-HHHHHHccCCCCCccccCceEEEcCCC-chhHHHHH---------
Q 005131 493 VSQIKESTKIPVLGHADGICHIYVDKSA-DMDMA-KQIVLDAKVDYPAACNAMETLLIHQDL-VPTGFNEL--------- 560 (713)
Q Consensus 493 g~~i~~~~~~~v~lElgG~~p~iV~~dA-Dl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i-~d~fi~~l--------- 560 (713)
|+.|+..+++++++|+|||||+||++|| |+|.| ..+++++|.|+||.|++++|+|||+++ +|+|+++|
T Consensus 233 Gr~i~~~~g~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~ 312 (489)
T cd07126 233 AERLALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKL 312 (489)
T ss_pred HHHHHHHhCCCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhccc
Confidence 9999998889999999999999999999 99999 456777888999999999999999995 68999987
Q ss_pred -------------------HHHHHh-CCCEE-EcCCcc------c--cccC------------C-CCCCCccccccCceE
Q 005131 561 -------------------IDNLRS-EGVTL-YGGPRA------S--SLLN------------I-PEPNSFHHEYNSMAC 598 (713)
Q Consensus 561 -------------------~~~~~~-~Ga~l-~gg~~~------~--~~~~------------v-~~~~~~~eE~FgPvl 598 (713)
++++++ +|+++ +||... + .|+. + ++|++++||+||||+
T Consensus 313 g~~~~Gpli~~~~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl 392 (489)
T cd07126 313 EDLTIGPVLTWTTERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQ 392 (489)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEE
Confidence 255666 89998 788542 1 2432 1 278999999999999
Q ss_pred EEEEeCC--HHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeee--EEEcCCCCCCCC----CCccCccceeecc
Q 005131 599 TIEIVDD--VHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAA--VFHNASTRFCDG----ARFGLGAEVGIST 668 (713)
Q Consensus 599 ~v~~~~~--~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~--v~iN~~~~~~~~----~pfGG~k~SG~g~ 668 (713)
+|++|+| +||||+++|+++|||++||||+|.+++.++++++++|+ |+||+.+...+. +||||+|.||+|+
T Consensus 393 ~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~ 470 (489)
T cd07126 393 VVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGT 470 (489)
T ss_pred EEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCC
Confidence 9999999 99999999999999999999999999999999999999 668877544433 9999999999998
No 104
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=100.00 E-value=1.8e-71 Score=616.07 Aligned_cols=381 Identities=22% Similarity=0.235 Sum_probs=320.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHH
Q 005131 294 EMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVL 373 (713)
Q Consensus 294 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~ 373 (713)
+|+++|++||+.|+++|..+|+++|+++++.|++++++|++.+.+++|++..+ ....|+.....+++..++.++.+
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~----a~~~ev~~~~~~~~~~~~~~~~~ 77 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFE----AVLSEILLVKNEIKYAISNLPEW 77 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999988754 22344544555556666655555
Q ss_pred hcccCccccccccccccCCceeeeeeccceeEEEEecC-CchHH-HHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHH
Q 005131 374 ANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDAL-VQIAALAIRSGNGLLLKGGKEAKRSNAILHKIITE 451 (713)
Q Consensus 374 a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~ 451 (713)
+....+. .... ..+...++.++|+|||++|+|| ||+.+ .+++++||++||+||+|||+.+|.++..+++++.+
T Consensus 78 ~~~~~~~-~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~ 152 (443)
T cd07132 78 MKPEPVK-KNLA----TLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK 152 (443)
T ss_pred hCCccCC-Cccc----cCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 4311111 0000 1123467889999999999999 99988 59999999999999999999999999999999987
Q ss_pred hccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCCCHHHH-HH
Q 005131 452 VIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSADMDMA-KQ 527 (713)
Q Consensus 452 al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dADl~~A-~~ 527 (713)
+ +|+|++|+++|+.+.+..|.+ ++||+|+||||+++|+.|++.+ ++|+++|+|||||+||++|||++.| ..
T Consensus 153 ~----lp~gv~~vv~g~~~~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~ 227 (443)
T cd07132 153 Y----LDKECYPVVLGGVEETTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARR 227 (443)
T ss_pred h----CCcCeEEEEeCCHHHHHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHH
Confidence 6 677799999975333444444 5899999999999999998864 5999999999999999999999999 56
Q ss_pred HHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHh----------------------------CCCEE-EcCCcc-
Q 005131 528 IVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRS----------------------------EGVTL-YGGPRA- 577 (713)
Q Consensus 528 ~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~----------------------------~Ga~l-~gg~~~- 577 (713)
++.++|+|+||.|++++|+|||+++||+|+++|++.+.+ +++++ +||...
T Consensus 228 i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~a~~~~gg~~~~ 307 (443)
T cd07132 228 IAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSGGKVAIGGQTDE 307 (443)
T ss_pred HHHHHHhcCCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhCCEEEeCCccCC
Confidence 777888899999999999999999999999998644321 23455 677542
Q ss_pred -cccc------CC-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCC
Q 005131 578 -SSLL------NI-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNAS 649 (713)
Q Consensus 578 -~~~~------~v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 649 (713)
+.|+ ++ ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.||||++
T Consensus 308 ~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~ 387 (443)
T cd07132 308 KERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDT 387 (443)
T ss_pred CCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 3444 24 689999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC--CCCCCccCccceeeccccCCCcccchHhhceeEEEEEECC
Q 005131 650 TRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGS 692 (713)
Q Consensus 650 ~~~--~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 692 (713)
+.. .+.+||||+|+||+|+ ++|++|+++|+++|+|++++
T Consensus 388 ~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 388 IMHYTLDSLPFGGVGNSGMGA----YHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred ccccCCCCCCCCCCCcccCCC----cccHHHHHHhccccEEEEcc
Confidence 532 3679999999999999 89999999999999999875
No 105
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=100.00 E-value=1.3e-71 Score=612.36 Aligned_cols=375 Identities=19% Similarity=0.218 Sum_probs=310.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHH
Q 005131 289 EVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLAN 368 (713)
Q Consensus 289 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~ 368 (713)
-+|+++|+++|++||+.|++++.++|.++|+++++.|+++.++|++...++.|++..+ ..++
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~------------------~~~~ 64 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVE------------------DKIA 64 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH------------------HHHH
Confidence 3689999999999999999999999999999999999999999998888888877633 1133
Q ss_pred HHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHH
Q 005131 369 SVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILH 446 (713)
Q Consensus 369 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~ 446 (713)
.+++++.................+...+++++|+|||++|+|| ||+.++ +++++||++||+||+|||+.||+++.+++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~ 144 (429)
T cd07121 65 KNHLAAEKTPGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAV 144 (429)
T ss_pred HHHHHHHhcCcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHH
Confidence 4444443110000000100001222457788999999999999 999985 99999999999999999999999999999
Q ss_pred HHHHHhcc-ccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCCCHHH
Q 005131 447 KIITEVIP-ENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSADMDM 524 (713)
Q Consensus 447 ~~~~~al~-~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dADl~~ 524 (713)
++++++|. .|+|+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++. .+|+++|+|||||+||++|||+|.
T Consensus 145 ~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-~k~~~lelGGk~p~iV~~dADld~ 223 (429)
T cd07121 145 ELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-GKKAIGAGAGNPPVVVDETADIEK 223 (429)
T ss_pred HHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-CCceEeecCCCceEEEecCCCHHH
Confidence 99988754 4799999999997 45678888899999999999999999999987 699999999999999999999999
Q ss_pred H-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHH-------------------HHh--CCCEE-EcCCc-----
Q 005131 525 A-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDN-------------------LRS--EGVTL-YGGPR----- 576 (713)
Q Consensus 525 A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~-------------------~~~--~Ga~l-~gg~~----- 576 (713)
| ..+++++++|+||.|+|++|+|||+++||+|+++|++. +.+ .|+++ +||..
T Consensus 224 Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~ 303 (429)
T cd07121 224 AARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRNGAYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILK 303 (429)
T ss_pred HHHHHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHCCCEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHH
Confidence 9 56677889999999999999999999999999998531 222 25777 66642
Q ss_pred -cccccC---------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCc--eeEEEcCCHHHHHHHHhccCeee
Q 005131 577 -ASSLLN---------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGH--TDCIITNDSEAAEIFLRQVDSAA 643 (713)
Q Consensus 577 -~~~~~~---------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL--~a~v~t~d~~~a~~~~~~l~~G~ 643 (713)
.+.|++ + ++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.+++++|++++++|.
T Consensus 304 ~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~ 383 (429)
T cd07121 304 AAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTI 383 (429)
T ss_pred HcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceE
Confidence 133321 3 6899999999999999999999999999999999999 99999999999999999999999
Q ss_pred EEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 644 VFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 644 v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
||||+++. .++||||+|.|++.- +|+.| +.++.+|+++.
T Consensus 384 v~iN~~~~--~~~p~gG~k~s~~~~-----~~~~~-~~~~~~~~~~~ 422 (429)
T cd07121 384 FVKNGPSY--AGLGVGGEGYTTFTI-----AGPTG-EGLTSARTFTR 422 (429)
T ss_pred EEEcCCCc--CccccCCCccceEEe-----cCCcC-cCccChhhhhe
Confidence 99998754 679999999999942 24445 55577776654
No 106
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=3.8e-71 Score=621.32 Aligned_cols=395 Identities=14% Similarity=0.140 Sum_probs=329.5
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESS-RRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~-~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
.++.||+.++++.. . .+|+++|+++|++|| +.|+++|+.+|+++|++++++|++++++|++....+.|++
T Consensus 24 ~nP~tge~l~~v~~-~--------~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp 94 (521)
T PRK11903 24 FDPVTGEELVRVSA-T--------GLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTT 94 (521)
T ss_pred ECCCCCCEEEEecC-C--------hHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 45678888888754 4 789999999999995 9999999999999999999999999999997666666665
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcccccccccc--c----cCCceeeeeecc-ceeEEEEecC-Cch
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQ--L----ADGLFLEKTSCP-LGVLLIVFES-RPD 414 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~--~----~~~~~~~~~~~P-~GVv~~I~p~-~P~ 414 (713)
..++ ..|+..+++.+++|+. .....+....... . ......+..++| +|||++|+|| ||+
T Consensus 95 ~~~a------------~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~ 162 (521)
T PRK11903 95 RNDS------------AVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPA 162 (521)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHH
Confidence 5331 2689999999999987 3332221110000 0 012234567899 6999999999 999
Q ss_pred HHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhcccc-CCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHH
Q 005131 415 ALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPEN-VGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNR 491 (713)
Q Consensus 415 ~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~g-lP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~ 491 (713)
+++ ++++|||++||+||+|||+.+|.++..+.+++.++ | +|+|+||+|+|+ +++++.| +++|+|+||||++
T Consensus 163 ~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~a---g~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~ 236 (521)
T PRK11903 163 WGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAA---GILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAE 236 (521)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHh---CCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHH
Confidence 885 99999999999999999999999999999999999 9 899999999974 4555544 7899999999999
Q ss_pred HHHHHHHhc-----CCCeEEecCccceEEEcCCCCH-----HHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH
Q 005131 492 LVSQIKEST-----KIPVLGHADGICHIYVDKSADM-----DMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL 560 (713)
Q Consensus 492 ~g~~i~~~~-----~~~v~lElgG~~p~iV~~dADl-----~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l 560 (713)
+|++|++.+ ++|++||||||||+||++|||+ +.| ..+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus 237 ~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L 316 (521)
T PRK11903 237 TAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEAL 316 (521)
T ss_pred HHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHH
Confidence 999999842 5999999999999999999994 888 67788888999999999999999999999999988
Q ss_pred HH---------------------------------HHHhCCCEE-EcCCc---------cccccC------C---CCCCC
Q 005131 561 ID---------------------------------NLRSEGVTL-YGGPR---------ASSLLN------I---PEPNS 588 (713)
Q Consensus 561 ~~---------------------------------~~~~~Ga~l-~gg~~---------~~~~~~------v---~~~~~ 588 (713)
++ +...+|+++ +||.. .+.|+. + .++.+
T Consensus 317 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i 396 (521)
T PRK11903 317 AARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAV 396 (521)
T ss_pred HHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchH
Confidence 31 123469998 77743 134442 1 23678
Q ss_pred ccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc--CeeeEEEcCCC---------CCCCCCC
Q 005131 589 FHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV--DSAAVFHNAST---------RFCDGAR 657 (713)
Q Consensus 589 ~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l--~~G~v~iN~~~---------~~~~~~p 657 (713)
++||+||||++|++|+|+||||+++|+++|||++||||+|..++.++++++ ++|+||||+.+ ...+.+|
T Consensus 397 ~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~P 476 (521)
T PRK11903 397 HDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSL 476 (521)
T ss_pred HhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCC
Confidence 899999999999999999999999999999999999999999999999999 99999999753 1335789
Q ss_pred ccCccceeeccccCCC-cccchHhhceeEEEEEE
Q 005131 658 FGLGAEVGISTSRIHA-RGPVGVEGLLTTRWILK 690 (713)
Q Consensus 658 fGG~k~SG~g~~~~~~-~g~~~l~~~~~~k~v~~ 690 (713)
|||+|.||+|+ + +|++++++||+.|+|..
T Consensus 477 fGG~k~SG~Gr----~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 477 HGGPGRAGGGE----ELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred CCCCCcCcCCc----ccccHHHHHHHhccceeeC
Confidence 99999999998 6 45899999999887754
No 107
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=100.00 E-value=3.7e-71 Score=605.66 Aligned_cols=354 Identities=20% Similarity=0.199 Sum_probs=309.9
Q ss_pred HHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceee
Q 005131 318 LLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLE 396 (713)
Q Consensus 318 L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~ 396 (713)
|++++++|++|+++|++.+.+++|++..++ ..|+..+++.+++++. .....+...+.. ..+...+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea------------~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~ 66 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLA------------EVEVAFTADYIDYMAEWARRYEGEIIQSD--RPGENIL 66 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHH------------HHHHHHHHHHHHHHHHHHHHhcCcccCCC--CCCceeE
Confidence 578999999999999988888888776552 1588888999998887 333332222111 1234578
Q ss_pred eeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHH
Q 005131 397 KTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPD 473 (713)
Q Consensus 397 ~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~ 473 (713)
++++|+|||++|+|| ||+.++ ++++|||++||+||+|||+.+|.++..+++++.++ |+|+|+||+|+| +.++++
T Consensus 67 ~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a---glP~gv~~~v~g~~~~~~~ 143 (409)
T PRK10090 67 LFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEI---GLPKGVFNLVLGRGETVGQ 143 (409)
T ss_pred EEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHc---CCCcccEEEEeCCChhHHH
Confidence 899999999999999 999985 99999999999999999999999999999999999 899999999998 567889
Q ss_pred hhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEc
Q 005131 474 LLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIH 549 (713)
Q Consensus 474 ~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~ 549 (713)
.|..||++|+|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||+|.| ..+++++|+|+||.|++++|+|||
T Consensus 144 ~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~ 223 (409)
T PRK10090 144 ELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQ 223 (409)
T ss_pred HHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEc
Confidence 999999999999999999999998764 5899999999999999999999999 667778888999999999999999
Q ss_pred CCCchhHHHHHH-----------------------------------HHHHhCCCEE-EcCCcc---ccccC------C-
Q 005131 550 QDLVPTGFNELI-----------------------------------DNLRSEGVTL-YGGPRA---SSLLN------I- 583 (713)
Q Consensus 550 ~~i~d~fi~~l~-----------------------------------~~~~~~Ga~l-~gg~~~---~~~~~------v- 583 (713)
+++||+|+++|+ ++++++|+++ +||... +.|+. +
T Consensus 224 ~~i~~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~ 303 (409)
T PRK10090 224 KGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVR 303 (409)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCC
Confidence 999999999873 3455678888 787542 33442 3
Q ss_pred CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccc
Q 005131 584 PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAE 663 (713)
Q Consensus 584 ~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~ 663 (713)
++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|..++.++++++++|.||||++.......||||+|+
T Consensus 304 ~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~ 383 (409)
T PRK10090 304 QEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRK 383 (409)
T ss_pred CCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999866666789999999
Q ss_pred eeeccccCCCcccchHhhceeEEEEEECC
Q 005131 664 VGISTSRIHARGPVGVEGLLTTRWILKGS 692 (713)
Q Consensus 664 SG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 692 (713)
||+|+ ++|++|+++||+.|+|++++
T Consensus 384 SG~G~----~~g~~gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 384 SGIGG----ADGKHGLHEYLQTQVVYLQS 408 (409)
T ss_pred ccCCc----cchHHHHHHhcceEEEEEec
Confidence 99999 89999999999999998753
No 108
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8e-71 Score=638.07 Aligned_cols=394 Identities=18% Similarity=0.217 Sum_probs=331.0
Q ss_pred HHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 265 LKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARES-SRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 265 ~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
.++.+|+.++++... .+|+++|+++|++| |+.|+++|+.+|+++|++++++|++++++|+. ...++|++
T Consensus 24 ~nP~tg~~i~~~~~~---------~~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~ 93 (675)
T PRK11563 24 HDAVTGEPVARVSSE---------GLDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGAT 93 (675)
T ss_pred cCCCCCCEEEEEcCC---------cHHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCC
Confidence 456788888887543 35899999999998 79999999999999999999999999999996 35666666
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcc--------ccccccccccCCceeeeeeccc-eeEEEEecC-C
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPI--------GHILKKTQLADGLFLEKTSCPL-GVLLIVFES-R 412 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~--------~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~-~ 412 (713)
..++ ..|+..+++.+++|+. ..+.. ++..+.. .......+..++|+ |||++|+|| |
T Consensus 94 ~~~a------------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~GVv~~I~PwNf 160 (675)
T PRK11563 94 RRDS------------WIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLS-KGGTFAGRHILTPLEGVAVHINAFNF 160 (675)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHhhhccccccccCCcccccc-CCCcccceEEEeecCceEEEECCCch
Confidence 5432 1588888999999987 32221 2221111 01112246788997 999999999 9
Q ss_pred chHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhcccc-CCCCeEEEecCCchhHHhhhcCCCccEEEecCCH
Q 005131 413 PDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPEN-VGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSN 490 (713)
Q Consensus 413 P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~g-lP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~ 490 (713)
|++++ ++++|||++||+||+|||+.+|+++..+++++.++ | +|+|+||+|+|. .++++..++.+++|+||||+
T Consensus 161 P~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~ea---G~~P~gv~~vv~g~--~~~~~~~~~~i~~v~FTGS~ 235 (675)
T PRK11563 161 PVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVES---GLLPEGALQLICGS--AGDLLDHLDGQDVVTFTGSA 235 (675)
T ss_pred HHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHc---CCCCCCcEEEeeCC--HHHHhhcCCCCCEEEEECcH
Confidence 99985 99999999999999999999999999999999999 9 999999999975 23455555789999999999
Q ss_pred HHHHHHHHh-----cCCCeEEecCccceEEEcCCCC-----HHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHH
Q 005131 491 RLVSQIKES-----TKIPVLGHADGICHIYVDKSAD-----MDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNE 559 (713)
Q Consensus 491 ~~g~~i~~~-----~~~~v~lElgG~~p~iV~~dAD-----l~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~ 559 (713)
++|++|++. ..+|+++|||||||+||++||| +|.| ..+++++|.|+||.|++++|+|||+++||+|+++
T Consensus 236 ~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~ 315 (675)
T PRK11563 236 ATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEA 315 (675)
T ss_pred HHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHH
Confidence 999999983 2599999999999999999995 9999 6677888889999999999999999999999998
Q ss_pred H----------------------------------HHHHHhCCCEE-EcCCc----------cccccC------C-C--C
Q 005131 560 L----------------------------------IDNLRSEGVTL-YGGPR----------ASSLLN------I-P--E 585 (713)
Q Consensus 560 l----------------------------------~~~~~~~Ga~l-~gg~~----------~~~~~~------v-~--~ 585 (713)
| +++++++ +++ +||.. .+.|+. + + +
T Consensus 316 l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~ 394 (675)
T PRK11563 316 LRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEA 394 (675)
T ss_pred HHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhh
Confidence 7 3567777 888 88742 144542 3 4 3
Q ss_pred CCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccC--eeeEEEcCCC--------CC-CC
Q 005131 586 PNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVD--SAAVFHNAST--------RF-CD 654 (713)
Q Consensus 586 ~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~--~G~v~iN~~~--------~~-~~ 654 (713)
+++++||+||||++|++|+|+||||+++|+++|||++||||+|..++.+++++++ +|.||||+.+ .. .+
T Consensus 395 ~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~ 474 (675)
T PRK11563 395 PAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLP 474 (675)
T ss_pred hhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCc
Confidence 6899999999999999999999999999999999999999999999999999997 9999999752 11 26
Q ss_pred CCCccCccceeeccccCCC-cccchHhhceeEEEEEEC
Q 005131 655 GARFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWILKG 691 (713)
Q Consensus 655 ~~pfGG~k~SG~g~~~~~~-~g~~~l~~~~~~k~v~~~ 691 (713)
.+||||+|.||+|+ + +|.+|+++|++.|+|..-
T Consensus 475 ~~pfGG~k~SG~G~----~~~g~~~~~~f~~~k~~~~~ 508 (675)
T PRK11563 475 QLVHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQGS 508 (675)
T ss_pred CCCcCCCCCCCCCc----cccchhHHHHhheeeeeecC
Confidence 78999999999998 7 579999999999999753
No 109
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=3.2e-71 Score=562.31 Aligned_cols=382 Identities=23% Similarity=0.258 Sum_probs=339.5
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHH
Q 005131 292 AREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVR 371 (713)
Q Consensus 292 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~ 371 (713)
+++.++++|.+|.+.++.|.+.|.++|+++...+++|+++|..+..+|++++..+ +.+.|+.....|+..+++.|.
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~e----s~~~Ev~~~~~~i~~~l~~L~ 79 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELE----SYLNEVGYVLNEIRYALENLP 79 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhH----HHHHHHHHHHHHHHHHHHhhH
Confidence 4566999999999999999999999999999999999999999999999999877 678888888899999999999
Q ss_pred HHhcccCccccccccccccCCceeeeeeccceeEEEEecC-CchHH-HHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 005131 372 VLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDAL-VQIAALAIRSGNGLLLKGGKEAKRSNAILHKII 449 (713)
Q Consensus 372 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~ 449 (713)
.|+...+........ -...++..+|+|||++|+|| ||+.+ ...+++|||||||||+||||.+|.++.++++++
T Consensus 80 ~wv~~~~v~~~~~t~-----~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakll 154 (477)
T KOG2456|consen 80 EWVKPEPVKKSFLTF-----LDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLL 154 (477)
T ss_pred HhccccccCcccccc-----cCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHH
Confidence 998744332222221 12567899999999999999 99987 488889999999999999999999999999999
Q ss_pred HHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCCCHHHH
Q 005131 450 TEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSADMDMA 525 (713)
Q Consensus 450 ~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dADl~~A 525 (713)
.++|+.. ++.||.|+ +++.++|.+ ++|+|+||||+.+|+.|+.++ ++||+||||||||++|++|+|++.|
T Consensus 155 p~Yld~~----~~~VV~Ggv~ETt~LL~~--rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia 228 (477)
T KOG2456|consen 155 PQYLDQD----LIRVVNGGVPETTELLKQ--RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIA 228 (477)
T ss_pred HHhcCcc----eEEEecCCCchHHHHHHh--hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHH
Confidence 9985555 99999975 889999985 799999999999999999864 6999999999999999999999999
Q ss_pred -HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-----------------------------HHHHhC-CCEEEcC
Q 005131 526 -KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-----------------------------DNLRSE-GVTLYGG 574 (713)
Q Consensus 526 -~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-----------------------------~~~~~~-Ga~l~gg 574 (713)
.+++|++++|+||.|.|+++|+++.+++.++++++. ..+++. |..+.||
T Consensus 229 ~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~~kv~~Gg 308 (477)
T KOG2456|consen 229 ARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDETGKVAIGG 308 (477)
T ss_pred HHHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCCCceecCC
Confidence 889999999999999999999999999999999872 234445 4445888
Q ss_pred Cccc--ccc------CC-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEE
Q 005131 575 PRAS--SLL------NI-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVF 645 (713)
Q Consensus 575 ~~~~--~~~------~v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~ 645 (713)
..+. .|+ +| .++++|+||+|||||||+.|.|++|+|+.+|+.+.+|++|+||+|.....|+..++.+|.|.
T Consensus 309 ~~d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt 388 (477)
T KOG2456|consen 309 ESDESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVT 388 (477)
T ss_pred ccchhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCee
Confidence 7653 233 35 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCC--CCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEECC
Q 005131 646 HNAST--RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGS 692 (713)
Q Consensus 646 iN~~~--~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 692 (713)
+|+.. .....+||||++.||+|+ ++|++|++.|++.|++..+.
T Consensus 389 ~ND~i~H~~~~~lPFGGVG~SGmG~----YhGK~sFdTFSH~k~~l~rs 433 (477)
T KOG2456|consen 389 VNDVIMHVTLDSLPFGGVGESGMGR----YHGKFSFDTFSHEKSCLLRS 433 (477)
T ss_pred ecceEEEEEeeccCcCCcCcccccc----ccccccccccccchhhhhcc
Confidence 99983 345889999999999999 77999999999999998653
No 110
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=2.1e-70 Score=650.60 Aligned_cols=429 Identities=19% Similarity=0.190 Sum_probs=358.3
Q ss_pred hHHHHHHHHHHHHcCCc--EEEEeC-CCchhHHHHhcCC-cceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCH
Q 005131 236 MTAKVKAAVNAAYAGIP--VVITSG-YSDENILKVLQGE-RIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSS 311 (713)
Q Consensus 236 m~~Kl~aa~~a~~~gv~--v~I~~g-~~~~~l~~~~tge-~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~ 311 (713)
...+++++....+.... --|++| .....+.++.+++ .+|++...+ .+++++|+++|++||+.|+++|+
T Consensus 535 ~~~~~~~al~~~~~~~~~~~~~i~g~~~~~~v~nP~~~~~~vg~v~~a~--------~~~v~~Ai~aA~~A~~~W~~~~~ 606 (1038)
T PRK11904 535 ELEPLAAAIAAFLEKQWQAGPIINGEGEARPVVSPADRRRVVGEVAFAD--------AEQVEQALAAARAAFPAWSRTPV 606 (1038)
T ss_pred HHHHHHHHHHHHHhcCceecceEcCCCCeEEEECCCCCCeeEEEEeCCC--------HHHHHHHHHHHHHHHHHhccCCH
Confidence 34455566655543322 122344 1122345677766 778777764 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcccccccccccc
Q 005131 312 EDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLA 390 (713)
Q Consensus 312 ~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~ 390 (713)
++|+++|++++++|++++++|+.....+.|++..++ ..|+..+++.+++|+. ..+..+...... .+
T Consensus 607 ~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a------------~~EV~eaid~lr~ya~~a~~~~~~~~~l~-g~ 673 (1038)
T PRK11904 607 EERAAILERAADLLEANRAELIALCVREAGKTLQDA------------IAEVREAVDFCRYYAAQARRLFGAPEKLP-GP 673 (1038)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH------------HHHHHHHHHHHHHHHHHHHHhhCCCcccC-CC
Confidence 999999999999999999999987777777766442 2689999999999987 433322211111 12
Q ss_pred CCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC
Q 005131 391 DGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR 468 (713)
Q Consensus 391 ~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~ 468 (713)
.|...+..++|+|||++|+|| ||+.++ +++++||++||+||+|||++||+++..+.+++.++ |+|+|++|+|+|.
T Consensus 674 ~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eA---GlP~gvl~lv~G~ 750 (1038)
T PRK11904 674 TGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEA---GIPKDVLQLLPGD 750 (1038)
T ss_pred CCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHh---CcCcceEEEeeCC
Confidence 356678899999999999999 999985 99999999999999999999999999999999999 9999999999984
Q ss_pred -chhHHhhhcCCCccEEEecCCHHHHHHHHHhc------CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCcc
Q 005131 469 -EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST------KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAAC 540 (713)
Q Consensus 469 -~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~------~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C 540 (713)
+++++.|..||+|++|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||+|.| ..+++++|.++||.|
T Consensus 751 g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~C 830 (1038)
T PRK11904 751 GATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRC 830 (1038)
T ss_pred chHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCcc
Confidence 56899999999999999999999999998653 4799999999999999999999999 667888888999999
Q ss_pred ccCceEEEcCCCchhHHHHHH----------------------------------HHHHhCCCEE-EcCCcc-----ccc
Q 005131 541 NAMETLLIHQDLVPTGFNELI----------------------------------DNLRSEGVTL-YGGPRA-----SSL 580 (713)
Q Consensus 541 ~a~~rv~V~~~i~d~fi~~l~----------------------------------~~~~~~Ga~l-~gg~~~-----~~~ 580 (713)
+|++|+|||+++||+|+++|+ +.+.+ |+++ +||... +.|
T Consensus 831 sA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~f 909 (1038)
T PRK11904 831 SALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHF 909 (1038)
T ss_pred ccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceE
Confidence 999999999999999999873 33333 7777 777542 345
Q ss_pred cC-----CCCCCCccccccCceEEEEEeC--CHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCC-C
Q 005131 581 LN-----IPEPNSFHHEYNSMACTIEIVD--DVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTR-F 652 (713)
Q Consensus 581 ~~-----v~~~~~~~eE~FgPvl~v~~~~--~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~ 652 (713)
+. ++++.+++||+||||++|++|+ ++||||+++|+++|||+++|||+|.+++.++++++++|+||||+.+. .
T Consensus 910 v~PTvi~~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga 989 (1038)
T PRK11904 910 VAPTAFEIDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGA 989 (1038)
T ss_pred EeeEEEccCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccC
Confidence 42 2678889999999999999997 79999999999999999999999999999999999999999998743 3
Q ss_pred -CCCCCccCccceeeccccCCCcccchHhhceeEEEEEECC
Q 005131 653 -CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGS 692 (713)
Q Consensus 653 -~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 692 (713)
...+||||+|.||+|.. .+|+++|++|++.|+|+++.
T Consensus 990 ~vg~qPFGG~~~SG~G~k---aGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 990 VVGVQPFGGQGLSGTGPK---AGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred CCCCCCCCCCCCCCCCCc---cchHHHHHHHhceEEEEEcc
Confidence 35689999999999942 78999999999999999864
No 111
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=100.00 E-value=3.1e-70 Score=605.03 Aligned_cols=376 Identities=20% Similarity=0.233 Sum_probs=321.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHH
Q 005131 294 EMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVL 373 (713)
Q Consensus 294 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~ 373 (713)
+++++|++||+.|+++|..+|.++|+++++.|++++++|++.+..++|++..+. . ..|+..+++.++++
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea----~-------~~ev~~~~~~~~~~ 70 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEV----D-------LTEILPVLSEINHA 70 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH----H-------HHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999999988888888876441 0 13566666666666
Q ss_pred hc-ccCccc-cccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 005131 374 AN-MEDPIG-HILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKII 449 (713)
Q Consensus 374 a~-~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~ 449 (713)
+. ..+..+ ..........+...++.++|+|||++|+|| ||++++ ++++|||++||+||+|||+.+|.++.++++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~ 150 (433)
T cd07134 71 IKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKII 150 (433)
T ss_pred HHHHHHHhCCcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHH
Confidence 54 221111 111000001244568899999999999999 999985 99999999999999999999999999999999
Q ss_pred HHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCCCHHHH-
Q 005131 450 TEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSADMDMA- 525 (713)
Q Consensus 450 ~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dADl~~A- 525 (713)
+++ +|+|++++++|+.+.+..|..|| +++|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||++.|
T Consensus 151 ~~a----~p~g~v~~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa 225 (433)
T cd07134 151 REA----FDEDEVAVFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAA 225 (433)
T ss_pred HHh----CCcCEEEEEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHH
Confidence 988 56779999998666788888888 99999999999999999864 4899999999999999999999999
Q ss_pred HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-----------------------------------HHHHhCCCE
Q 005131 526 KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-----------------------------------DNLRSEGVT 570 (713)
Q Consensus 526 ~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-----------------------------------~~~~~~Ga~ 570 (713)
..+++++|+++||.|++++|+|||+++||+|+++|+ ++++++|++
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~ 305 (433)
T cd07134 226 KKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAK 305 (433)
T ss_pred HHHHHHhhcCcCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCE
Confidence 567777888999999999999999999999999873 345567898
Q ss_pred E-EcCCcc--ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccC
Q 005131 571 L-YGGPRA--SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVD 640 (713)
Q Consensus 571 l-~gg~~~--~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~ 640 (713)
+ +||... +.|+. + ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+++++++
T Consensus 306 ~~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 385 (433)
T cd07134 306 VEFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTS 385 (433)
T ss_pred EEeCCCcCCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCC
Confidence 8 777543 34442 3 689999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCC--CCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 641 SAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 641 ~G~v~iN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+|.||||+++. ..+.+||||+|+||+|+ ++|++|+++||+.|+|.
T Consensus 386 ~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 386 SGGVVVNDVVLHFLNPNLPFGGVNNSGIGS----YHGVYGFKAFSHERAVL 432 (433)
T ss_pred cceEEECCcccccCCCCCCCCCcCcccCCC----cCcHHHHHHhcccceee
Confidence 99999998753 34789999999999999 89999999999999985
No 112
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=100.00 E-value=1.2e-69 Score=601.31 Aligned_cols=377 Identities=19% Similarity=0.201 Sum_probs=314.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHH
Q 005131 288 NEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLA 367 (713)
Q Consensus 288 t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~ 367 (713)
..+|+++++++|++||++|++++.++|.++|+++++.|++|+++|++...+++|++..+ ..+
T Consensus 34 ~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~e--------------a~~---- 95 (465)
T PRK15398 34 VFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVE--------------DKI---- 95 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHH--------------HHH----
Confidence 37899999999999999999999999999999999999999999998888888876533 111
Q ss_pred HHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHH
Q 005131 368 NSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAI 444 (713)
Q Consensus 368 ~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~ 444 (713)
..+++++. ...+........ ...+...+++++|+|||++|+|| ||+.++ +++++||++||+||+|||+.||.++..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~ 174 (465)
T PRK15398 96 AKNVAAAEKTPGVEDLTTEAL-TGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLR 174 (465)
T ss_pred HHHHHHHHHhccccccccCcc-cCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHH
Confidence 22233332 111110000000 01223457788999999999999 999985 999999999999999999999999999
Q ss_pred HHHHHHHhc-cccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCCCH
Q 005131 445 LHKIITEVI-PENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSADM 522 (713)
Q Consensus 445 l~~~~~~al-~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dADl 522 (713)
++++++++| +.|+|+|++|+|+| +.+.++.|..||+||+|+||||+++|+.|++ +.+|+++|+|||||+||++|||+
T Consensus 175 l~~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-~~k~~~~elGGk~p~IV~~dADl 253 (465)
T PRK15398 175 AIELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-SGKKAIGAGAGNPPVVVDETADI 253 (465)
T ss_pred HHHHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-cCCceeeecCCCceEEEecCCCH
Confidence 999999875 44799999999997 4567888888999999999999999999999 58999999999999999999999
Q ss_pred HHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHH---------------HHHh-C---CCEE-EcCCc-----
Q 005131 523 DMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELID---------------NLRS-E---GVTL-YGGPR----- 576 (713)
Q Consensus 523 ~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~---------------~~~~-~---Ga~l-~gg~~----- 576 (713)
+.| ..+++++++|+||.|+|++|+|||+++||+|+++|++ ..+. . ++++ .|+..
T Consensus 254 d~Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~ 333 (465)
T PRK15398 254 EKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNGAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILE 333 (465)
T ss_pred HHHHHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHH
Confidence 999 5677888999999999999999999999999999865 1122 1 3344 44431
Q ss_pred -ccccc---------CC-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCc--eeEEEcCCHHHHHHHHhccCeee
Q 005131 577 -ASSLL---------NI-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGH--TDCIITNDSEAAEIFLRQVDSAA 643 (713)
Q Consensus 577 -~~~~~---------~v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL--~a~v~t~d~~~a~~~~~~l~~G~ 643 (713)
.+.|+ ++ ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|..++++|++++++|+
T Consensus 334 ~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~ 413 (465)
T PRK15398 334 AAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSI 413 (465)
T ss_pred hCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceE
Confidence 13332 13 7899999999999999999999999999999999998 99999999999999999999999
Q ss_pred EEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEECC
Q 005131 644 VFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGS 692 (713)
Q Consensus 644 v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 692 (713)
||||.++. +.+||||+|.|.+. .+|+.| ...|..|+++++.
T Consensus 414 V~iN~~~~--~~~p~gg~~~s~~~-----~~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 414 FVKNGPSY--AGLGLGGEGFTTFT-----IATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred EEECCCCc--cccCcCCCCCceee-----ecccCC-CCccchhhhhhhe
Confidence 99998752 67999999988864 568999 9999999888754
No 113
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=100.00 E-value=5.7e-69 Score=594.76 Aligned_cols=376 Identities=22% Similarity=0.246 Sum_probs=318.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHH
Q 005131 294 EMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVL 373 (713)
Q Consensus 294 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~ 373 (713)
+++++|++||+.|+++|+.+|+++|++++++|++++++|+..+..++|++..+. . ..|+...++.++++
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~----~-------~~Ev~~~~~~~~~~ 70 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEA----Y-------LTEIAVVLGEIDHA 70 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH----H-------HHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999999999988888888774321 0 14777777777777
Q ss_pred hc-ccCccccc-cccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 005131 374 AN-MEDPIGHI-LKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKII 449 (713)
Q Consensus 374 a~-~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~ 449 (713)
+. ..+..+.. ........+...+.+++|+|||++|+|| ||+.++ ++++|||++||+||+|||+.+|.++.+++++|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~ 150 (426)
T cd07087 71 LKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLI 150 (426)
T ss_pred HHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHH
Confidence 65 22211111 1000001233567899999999999999 999885 99999999999999999999999999999999
Q ss_pred HHhccccCCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCCCHHHH-
Q 005131 450 TEVIPENVGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSADMDMA- 525 (713)
Q Consensus 450 ~~al~~glP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dADl~~A- 525 (713)
.+. +|+|++|+++|+.+.++.|..|| +|+|+||||+++|+.|++.+ .+|+++|+|||||+||++|||++.|
T Consensus 151 ~~~----~P~gv~~vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa 225 (426)
T cd07087 151 PKY----FDPEAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAA 225 (426)
T ss_pred HHh----CCCCEEEEEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHH
Confidence 874 77789999998655677788888 99999999999999998765 5999999999999999999999999
Q ss_pred HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHh----------------------------CCCEE-EcCCc
Q 005131 526 KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRS----------------------------EGVTL-YGGPR 576 (713)
Q Consensus 526 ~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~----------------------------~Ga~l-~gg~~ 576 (713)
..++.++++++||.|++++|+|||+++||+|+++|++.+.+ +.+++ +||..
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a~v~~gg~~ 305 (426)
T cd07087 226 RRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDGKVVIGGQV 305 (426)
T ss_pred HHHHHHHHhccCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcceEEeCCcc
Confidence 56777788899999999999999999999999998654321 11245 67654
Q ss_pred c--ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEc
Q 005131 577 A--SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHN 647 (713)
Q Consensus 577 ~--~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN 647 (713)
. +.|+. + ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|..++.++++++++|+|+||
T Consensus 306 ~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN 385 (426)
T cd07087 306 DKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVN 385 (426)
T ss_pred CCCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEEC
Confidence 2 34442 2 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC--CCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 648 ASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 648 ~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+++. ..+.+||||+|.||+|+ ++|++|+++||++|+|+
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 386 DVLLHAAIPNLPFGGVGNSGMGA----YHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CcccccCCCCCCCCCCCcccCCC----ccCHHHHHHhccceeec
Confidence 8743 34789999999999999 89999999999999885
No 114
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=5.1e-69 Score=643.05 Aligned_cols=383 Identities=19% Similarity=0.228 Sum_probs=334.5
Q ss_pred HHHhc-CCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHH
Q 005131 265 LKVLQ-GERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAA 343 (713)
Q Consensus 265 ~~~~t-ge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~ 343 (713)
.++.+ ++.+|++... +.+|+++|+++|++||+.|+++|+++|+++|++++++|++++++|+.....+.||+
T Consensus 664 ~nPa~~~~~vg~v~~a--------~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt 735 (1318)
T PRK11809 664 INPADPRDIVGYVREA--------TPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKT 735 (1318)
T ss_pred ECCCCCCeeEEEEeCC--------CHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCC
Confidence 44554 4566666655 49999999999999999999999999999999999999999999997777777766
Q ss_pred HHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHH
Q 005131 344 EQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIA 420 (713)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~ 420 (713)
..++ ..||++++++++||+. ..... ....++|+|||++|+|| ||+.++ +++
T Consensus 736 ~~~A------------~~EV~eaidflryyA~~a~~~~--------------~~~~~~PlGVV~~IsPWNFPlai~~g~i 789 (1318)
T PRK11809 736 FSNA------------IAEVREAVDFLRYYAGQVRDDF--------------DNDTHRPLGPVVCISPWNFPLAIFTGQV 789 (1318)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHhc--------------CCceeecccEEEEECCCccHHHHHHHHH
Confidence 5442 2689999999999987 32211 01368999999999999 999985 999
Q ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 421 ALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 421 ~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
++||++||+||+|||++||+++..++++++++ |+|+|+||+|+| ++++++.|..||+|++|+||||+++|+.|++.
T Consensus 790 aaALaAGN~VV~KPseqTpl~a~~lv~ll~eA---GlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~ 866 (1318)
T PRK11809 790 AAALAAGNSVLAKPAEQTPLIAAQAVRILLEA---GVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRN 866 (1318)
T ss_pred HHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHh---CcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999998 46789999999999999999999999999876
Q ss_pred c---------CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH---------
Q 005131 500 T---------KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL--------- 560 (713)
Q Consensus 500 ~---------~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l--------- 560 (713)
+ .+|+++|+|||||+||++|||+|.| ..+++++|.++||.|+|++|+|||+++||+|++.|
T Consensus 867 aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~v 946 (1318)
T PRK11809 867 LAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRM 946 (1318)
T ss_pred HhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 3 1799999999999999999999999 56778888889999999999999999999999987
Q ss_pred -------------------------HHHHHhCCCEE-EcCCc------cccccC-----CCCCCCccccccCceEEEEEe
Q 005131 561 -------------------------IDNLRSEGVTL-YGGPR------ASSLLN-----IPEPNSFHHEYNSMACTIEIV 603 (713)
Q Consensus 561 -------------------------~~~~~~~Ga~l-~gg~~------~~~~~~-----v~~~~~~~eE~FgPvl~v~~~ 603 (713)
+++++++|+++ .|+.. .+.|+. ++++.++++|+||||++|++|
T Consensus 947 GdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~~~~~~l~eEiFGPVL~V~~~ 1026 (1318)
T PRK11809 947 GNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIELDSFDELKREVFGPVLHVVRY 1026 (1318)
T ss_pred CCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEeccchhhhcCcccCceEEEEEe
Confidence 25667789988 54422 244553 277889999999999999999
Q ss_pred C--CHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCC--CCCCCccCccceeeccccCCCcccchH
Q 005131 604 D--DVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGV 679 (713)
Q Consensus 604 ~--~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~g~~~~~~~g~~~l 679 (713)
+ |+||+|+++|+++|||+++|||+|.+++.++++++++|+||||+.... ...+||||+|.||+|.. .+|++++
T Consensus 1027 ~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~k---aGGp~yL 1103 (1318)
T PRK11809 1027 NRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPK---AGGPLYL 1103 (1318)
T ss_pred CCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCC---CCCHHHH
Confidence 6 799999999999999999999999999999999999999999987433 24689999999999952 7999999
Q ss_pred hhceeEEE
Q 005131 680 EGLLTTRW 687 (713)
Q Consensus 680 ~~~~~~k~ 687 (713)
..|++.+.
T Consensus 1104 ~~f~~~~~ 1111 (1318)
T PRK11809 1104 YRLLATRP 1111 (1318)
T ss_pred HHHhccCC
Confidence 99999874
No 115
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=100.00 E-value=1.1e-68 Score=596.25 Aligned_cols=378 Identities=17% Similarity=0.178 Sum_probs=321.5
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHH
Q 005131 292 AREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVR 371 (713)
Q Consensus 292 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~ 371 (713)
+++|+++|++||+.|+++|.++|.++|+++++.|++++++|++....++|++..+. ..|+..+++.++
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~------------~~ev~~~~~~l~ 68 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARL------------QGELGRTTGQLR 68 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHH------------HHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999987777777665331 157888888888
Q ss_pred HHhc-ccC--ccccccccccc----cCCceeeeeeccceeEEEEecC-CchHH--H-HHHHHHHHhCCEEEEeCCCCchH
Q 005131 372 VLAN-MED--PIGHILKKTQL----ADGLFLEKTSCPLGVLLIVFES-RPDAL--V-QIAALAIRSGNGLLLKGGKEAKR 440 (713)
Q Consensus 372 ~~a~-~~~--~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~-~P~~~--~-~~~~~ALaaGN~vv~Kps~~~~~ 440 (713)
+++. ... +.+........ ..+...+..++|+|||++|+|| ||+.+ + +++++||++||+||+|||+.+|.
T Consensus 69 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~ 148 (454)
T cd07129 69 LFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPG 148 (454)
T ss_pred HHHHHHHhcCCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCch
Confidence 8876 221 11221111000 1123457789999999999999 99876 3 89999999999999999999999
Q ss_pred HHHHHHHHHHHhccc-cCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc-----CCCeEEecCccce
Q 005131 441 SNAILHKIITEVIPE-NVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST-----KIPVLGHADGICH 513 (713)
Q Consensus 441 ~~~~l~~~~~~al~~-glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~-----~~~v~lElgG~~p 513 (713)
++.++++++.++|.+ |+|+|+||+|+|+ .++++.|..||.||+|+||||+.+|+.|++.+ .+|+++|+|||||
T Consensus 149 t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~ 228 (454)
T cd07129 149 TSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228 (454)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCc
Confidence 999999999877543 6999999999984 46888888899999999999999999998853 5899999999999
Q ss_pred EEEcCCC---CHHHH-HHHHHHccCCCCCccccCceEEEcCC-CchhHHHHH------------------------HHHH
Q 005131 514 IYVDKSA---DMDMA-KQIVLDAKVDYPAACNAMETLLIHQD-LVPTGFNEL------------------------IDNL 564 (713)
Q Consensus 514 ~iV~~dA---Dl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~-i~d~fi~~l------------------------~~~~ 564 (713)
+||++|| |++.| ..+++++++|+||.|+|++|+|||++ +||+|+++| ++++
T Consensus 229 ~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~~~~~~i~~a 308 (454)
T cd07129 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEAL 308 (454)
T ss_pred EEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCCCCcChHHHHHHHHHHHHH
Confidence 9999999 89998 56778888899999999999999999 999999987 3566
Q ss_pred HhC-CCEE-EcCCcc--ccccC------C----CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCC--
Q 005131 565 RSE-GVTL-YGGPRA--SSLLN------I----PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITND-- 628 (713)
Q Consensus 565 ~~~-Ga~l-~gg~~~--~~~~~------v----~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d-- 628 (713)
+++ |+++ +||... +.|+. . ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 309 ~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~ 388 (454)
T cd07129 309 AAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDD 388 (454)
T ss_pred HhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCch
Confidence 777 9998 787642 44542 1 368899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcc--CeeeEEEcCCC-CCC--CCCCccC-ccceeeccccCCC--cccchHhhceeE
Q 005131 629 SEAAEIFLRQV--DSAAVFHNAST-RFC--DGARFGL-GAEVGISTSRIHA--RGPVGVEGLLTT 685 (713)
Q Consensus 629 ~~~a~~~~~~l--~~G~v~iN~~~-~~~--~~~pfGG-~k~SG~g~~~~~~--~g~~~l~~~~~~ 685 (713)
.+++++++++| ++|+|+||+++ ... +.+|||| +|.||+|+ + .|++++++||++
T Consensus 389 ~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~----~~~~g~~~~~~~~~~ 449 (454)
T cd07129 389 LALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPR----FTSVGTAAIERFLRP 449 (454)
T ss_pred HHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCc----cccccHHHHHHhccc
Confidence 89999999999 69999999874 333 4899999 99999998 6 689999999986
No 116
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=3e-68 Score=638.79 Aligned_cols=389 Identities=17% Similarity=0.203 Sum_probs=339.4
Q ss_pred HHHHhc-CCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHH
Q 005131 264 ILKVLQ-GERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAA 342 (713)
Q Consensus 264 l~~~~t-ge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~ 342 (713)
+.++.+ ++.+|++...+ .+++++|+++|++||+.|+.+|.++|+++|++++++|++++++|+.....+.|+
T Consensus 571 v~nP~~~~~~vg~v~~a~--------~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GK 642 (1208)
T PRK11905 571 VLNPADHDDVVGTVTEAS--------AEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGK 642 (1208)
T ss_pred EECCCCCCceEEEEeCCC--------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 345666 67777776664 999999999999999999999999999999999999999999999777777766
Q ss_pred HHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HH
Q 005131 343 AEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QI 419 (713)
Q Consensus 343 ~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~ 419 (713)
+..++ ..||.++++.+++|+. .....+ ...++|+|||++|+|| ||+.++ ++
T Consensus 643 t~~ea------------~~Ev~eaid~lr~ya~~a~~~~~--------------~~~~~P~GVv~~IsPwNfPlai~~g~ 696 (1208)
T PRK11905 643 TLANA------------IAEVREAVDFLRYYAAQARRLLN--------------GPGHKPLGPVVCISPWNFPLAIFTGQ 696 (1208)
T ss_pred CHHHH------------HHHHHHHHHHHHHHHHHHHHhcC--------------CceecCccEEEEEcCCcCHHHHHHHH
Confidence 65442 2789999999999987 322110 1357899999999999 999985 99
Q ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHH
Q 005131 420 AALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKE 498 (713)
Q Consensus 420 ~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 498 (713)
+++||++||+||+|||++||+++..++++|.++ |+|+|+||+|+|+ +++++.|..||+|++|+||||+++|+.|++
T Consensus 697 i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eA---GlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~ 773 (1208)
T PRK11905 697 IAAALVAGNTVLAKPAEQTPLIAARAVRLLHEA---GVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQR 773 (1208)
T ss_pred HHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHc---CCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999984 568999999999999999999999999988
Q ss_pred hc------CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------
Q 005131 499 ST------KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI---------- 561 (713)
Q Consensus 499 ~~------~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------- 561 (713)
.+ .+|+++|+|||||+||++|||+|.| ..+++++|.++||.|+|++|+|||+++||+|+++|+
T Consensus 774 ~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGd 853 (1208)
T PRK11905 774 TLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGD 853 (1208)
T ss_pred HHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCC
Confidence 63 3899999999999999999999999 567777788899999999999999999999999872
Q ss_pred ------------------------HHHHhCCCEEE-cCCc----cccccC-----CCCCCCccccccCceEEEEEeC--C
Q 005131 562 ------------------------DNLRSEGVTLY-GGPR----ASSLLN-----IPEPNSFHHEYNSMACTIEIVD--D 605 (713)
Q Consensus 562 ------------------------~~~~~~Ga~l~-gg~~----~~~~~~-----v~~~~~~~eE~FgPvl~v~~~~--~ 605 (713)
+++.++|+.+. |+.. .+.|+. ++++.+++||+||||++|++|+ +
T Consensus 854 P~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~~~~~~~~eEiFGPVL~V~~y~~~d 933 (1208)
T PRK11905 854 PWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEIDSISDLEREVFGPVLHVVRFKADE 933 (1208)
T ss_pred chhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEecCChHHhcCCccCceEEEEEeCCCC
Confidence 45667888884 3321 244542 3778899999999999999997 7
Q ss_pred HHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCC-CC-CCCCccCccceeeccccCCCcccchHhhce
Q 005131 606 VHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTR-FC-DGARFGLGAEVGISTSRIHARGPVGVEGLL 683 (713)
Q Consensus 606 ~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~-~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~ 683 (713)
+||+|+++|+++|||+++|||+|.+.+.++++++++|+||||+.+. .. ..+||||+|.||+|.+ .+|+++|++|+
T Consensus 934 ldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~k---aGGp~~L~~f~ 1010 (1208)
T PRK11905 934 LDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPK---AGGPLYLGRLV 1010 (1208)
T ss_pred HHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCc---CCCHHHHHHHh
Confidence 9999999999999999999999999999999999999999998743 33 5689999999999952 89999999999
Q ss_pred eEEEEEECC
Q 005131 684 TTRWILKGS 692 (713)
Q Consensus 684 ~~k~v~~~~ 692 (713)
+.|+|+++.
T Consensus 1011 ~~k~v~~~~ 1019 (1208)
T PRK11905 1011 REAPTPIPP 1019 (1208)
T ss_pred hcceeeccc
Confidence 999998753
No 117
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=7.6e-68 Score=582.03 Aligned_cols=381 Identities=17% Similarity=0.188 Sum_probs=308.9
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHH--H
Q 005131 292 AREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLAN--S 369 (713)
Q Consensus 292 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~--~ 369 (713)
+++|+++|++||+.|+++|+.+|.++|++++++|++|+++|++...+++|++..++. .++...+. .
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~------------~~~~~~~~~~~ 68 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDK------------VIKNHFAAEYI 68 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHH------------HHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999887777777764421 12232222 2
Q ss_pred HHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 005131 370 VRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHK 447 (713)
Q Consensus 370 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~ 447 (713)
.++++.. ..++..+. ..+...+++++|+|||++|+|| ||++++ ++++|||++||+||+|||+++|.++..+++
T Consensus 69 ~~~~~~~--~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~ 143 (439)
T cd07081 69 YNVYKDE--KTCGVLTG---DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143 (439)
T ss_pred HHHHhcc--ccCceecC---CCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHH
Confidence 3333321 11121111 1233467899999999999999 999985 999999999999999999999999999999
Q ss_pred HHHHhccc-cCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCCCHHHH
Q 005131 448 IITEVIPE-NVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSADMDMA 525 (713)
Q Consensus 448 ~~~~al~~-glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dADl~~A 525 (713)
+|.++|.+ |+|+|+||+|+| +.++++.|..||+|++|+||||+++.+..++. .||+++|||||||+||++|||+|.|
T Consensus 144 l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v~~~aa~~-~k~~~lElGGk~p~IV~~dADl~~A 222 (439)
T cd07081 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVKAAYSS-GKPAIGVGAGNTPVVIDETADIKRA 222 (439)
T ss_pred HHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHHHHHHHhc-CCCEEEEcCCCCeEEEcCCCCHHHH
Confidence 99877544 699999999997 56788999999999999999999976655543 7999999999999999999999999
Q ss_pred -HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH-------------------HHHHhCCCEEEcCCc------ccc
Q 005131 526 -KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI-------------------DNLRSEGVTLYGGPR------ASS 579 (713)
Q Consensus 526 -~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~-------------------~~~~~~Ga~l~gg~~------~~~ 579 (713)
..+++++++|+||+|++.+|+|||+++||+|+++|+ +++.++|+++.||.. .+.
T Consensus 223 a~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~ 302 (439)
T cd07081 223 VQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQGAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGL 302 (439)
T ss_pred HHHHHHHHhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCC
Confidence 667788899999999999999999999999999884 345567888866632 122
Q ss_pred cc---------CC---CCCCCccccccCceEEEEEeCCHHHHHHHHHcc----CCCceeEEEcCC---HHHHHHHHhccC
Q 005131 580 LL---------NI---PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQH----GSGHTDCIITND---SEAAEIFLRQVD 640 (713)
Q Consensus 580 ~~---------~v---~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~----~~gL~a~v~t~d---~~~a~~~~~~l~ 640 (713)
|+ ++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .+++++++++++
T Consensus 303 ~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~ 382 (439)
T cd07081 303 KVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMK 382 (439)
T ss_pred ccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCC
Confidence 22 11 689999999999999999999999999999975 899999999999 999999999999
Q ss_pred eeeEEEcCCC-CC--CCCCCccCccceeeccccCCCcc---cchHhhceeEEEEEE
Q 005131 641 SAAVFHNAST-RF--CDGARFGLGAEVGISTSRIHARG---PVGVEGLLTTRWILK 690 (713)
Q Consensus 641 ~G~v~iN~~~-~~--~~~~pfGG~k~SG~g~~~~~~~g---~~~l~~~~~~k~v~~ 690 (713)
+|.||||.++ .. ....-|||++.+-+|.+....++ ..+..+|+++|.|.+
T Consensus 383 ~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 383 TSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred ceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 9999999765 22 23455778887766642111112 146889999998875
No 118
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=100.00 E-value=9.4e-68 Score=586.19 Aligned_cols=376 Identities=14% Similarity=0.091 Sum_probs=321.3
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHH
Q 005131 293 REMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRV 372 (713)
Q Consensus 293 ~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~ 372 (713)
++|+++|++||+.|+++|+.+|+++|+++++.|++++++|+.....++|++. +. ..|+...++.+++
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~------------~~ev~~~i~~~~~ 68 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MF------------AENICGDQVQLRA 68 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hh------------hhhhcchHHHHHH
Confidence 6899999999999999999999999999999999999999988887777776 21 1577888888888
Q ss_pred Hhcc-cCc--cccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 005131 373 LANM-EDP--IGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHK 447 (713)
Q Consensus 373 ~a~~-~~~--~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~ 447 (713)
++.. ... .+..........+...+.+++|+|||++|+|| ||+.++ ++++|||++||+||+|||+.+|.++..+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~ 148 (442)
T cd07084 69 RAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVR 148 (442)
T ss_pred HHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHH
Confidence 8762 211 11111000001134567899999999999999 999875 999999999999999999999999999999
Q ss_pred HHHHhccccC-CCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhcC-CCeEEecCccceEEEcCCC-CHHH
Q 005131 448 IITEVIPENV-GERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTK-IPVLGHADGICHIYVDKSA-DMDM 524 (713)
Q Consensus 448 ~~~~al~~gl-P~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~-~~v~lElgG~~p~iV~~dA-Dl~~ 524 (713)
+++++ ++ |+|++|+|+|+...++.|..||++|+|+||||+++|+.|++.+. +|+++|+|||||+||++|| |+|.
T Consensus 149 ~l~~a---g~~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~~~v~lElgG~~~~iV~~dadd~~~ 225 (442)
T cd07084 149 LLHYA---GLLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVDY 225 (442)
T ss_pred HHHHh---CCCCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccCCcEEEeccCcCcEEECCChhhHHH
Confidence 99999 76 99999999986448888888999999999999999999999876 8999999999999999999 6999
Q ss_pred H-HHHHHHccCCCCCccccCceEEEcCC-CchhHHHHHH-------------------------HHHHhC-CCEE-EcCC
Q 005131 525 A-KQIVLDAKVDYPAACNAMETLLIHQD-LVPTGFNELI-------------------------DNLRSE-GVTL-YGGP 575 (713)
Q Consensus 525 A-~~~~~~~~~~~GQ~C~a~~rv~V~~~-i~d~fi~~l~-------------------------~~~~~~-Ga~l-~gg~ 575 (713)
| ..+++++|+|+||.|++++|+|||++ ++++|+++|+ +++.++ |+++ +||.
T Consensus 226 a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g~~~~gpl~~~~~~~~i~~a~~~gga~~~~gg~ 305 (442)
T cd07084 226 VAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLFSGK 305 (442)
T ss_pred HHHHHHHHHhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccCccccChhhhHHHHHHHHHHHhcCCcEEEeCCc
Confidence 9 66788889999999999999999999 9999999873 455666 4888 7775
Q ss_pred c---------cccccC------C-CCC---CCccccccCceEEEEEeCC--HHHHHHHHHccCCCceeEEEcCCHHHHHH
Q 005131 576 R---------ASSLLN------I-PEP---NSFHHEYNSMACTIEIVDD--VHAAIGHIHQHGSGHTDCIITNDSEAAEI 634 (713)
Q Consensus 576 ~---------~~~~~~------v-~~~---~~~~eE~FgPvl~v~~~~~--~~eAi~~~N~~~~gL~a~v~t~d~~~a~~ 634 (713)
. .+.|+. + ++| ++++||+||||++|++|+| ++|||+++|+++|||++||||+|.+++++
T Consensus 306 ~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~ 385 (442)
T cd07084 306 ELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQE 385 (442)
T ss_pred ccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHH
Confidence 3 134542 2 555 8999999999999999999 99999999999999999999999999999
Q ss_pred HHhcc-CeeeEEEcCC--CCCCCCCCccC-ccceeeccccCCCc-ccchHhhceeEEEE
Q 005131 635 FLRQV-DSAAVFHNAS--TRFCDGARFGL-GAEVGISTSRIHAR-GPVGVEGLLTTRWI 688 (713)
Q Consensus 635 ~~~~l-~~G~v~iN~~--~~~~~~~pfGG-~k~SG~g~~~~~~~-g~~~l~~~~~~k~v 688 (713)
+++++ ++|+||||.. +...+..|||| +|.||+|+ +. |.+++++||+...+
T Consensus 386 ~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~----~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 386 LIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGA----GIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCc----cccchHHhhheeeeeee
Confidence 99999 9999999976 34456678766 78999998 64 99999999987654
No 119
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=100.00 E-value=7.4e-67 Score=573.14 Aligned_cols=380 Identities=21% Similarity=0.239 Sum_probs=334.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-
Q 005131 297 VAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVLAN- 375 (713)
Q Consensus 297 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~- 375 (713)
++|++||+.|+++|.++|.++|+++++.|++++++|++.+.++++++..+. ...+++++.....|+..+++.+++++.
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~-~~~~~~~~~~~~~ev~~~~~~~~~~a~~ 79 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSL-IANWIAMMGCSESKLYKNIDTERGITAS 79 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence 368999999999999999999999999999999999999999999886432 335667777777899999999999986
Q ss_pred ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhcc
Q 005131 376 MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALVQIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIP 454 (713)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~ 454 (713)
..+..+...+ .+...+++++|+|||++|+|| ||+...+++++||++||+||+|||+.+|.++.++++++.++++
T Consensus 80 ~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~ 154 (397)
T cd07077 80 VGHIQDVLLP-----DNGETYVRAFPIGVTMHILPSTNPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADA 154 (397)
T ss_pred cCcccceEec-----CCCceEEEEecceEEEEEeCCCCchHHHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhh
Confidence 2222222211 123568899999999999999 9999449999999999999999999999999999999999988
Q ss_pred ccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhcC-CCeEEecCccceEEEcCCCCHHHH-HHHHHH
Q 005131 455 ENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTK-IPVLGHADGICHIYVDKSADMDMA-KQIVLD 531 (713)
Q Consensus 455 ~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~-~~v~lElgG~~p~iV~~dADl~~A-~~~~~~ 531 (713)
.++|++++++++| +.+.++.|..||++|+|+||||+.+++.+++.+. +|+++|+|||||+||++|||++.| ..++++
T Consensus 155 ~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~ 234 (397)
T cd07077 155 AHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDS 234 (397)
T ss_pred cCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence 8899999999996 5568888888999999999999999999999864 999999999999999999999999 456666
Q ss_pred ccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEE-EcCCccccccC-CCCCCCccccccCceEEEEEeCCHH--
Q 005131 532 AKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTL-YGGPRASSLLN-IPEPNSFHHEYNSMACTIEIVDDVH-- 607 (713)
Q Consensus 532 ~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l-~gg~~~~~~~~-v~~~~~~~eE~FgPvl~v~~~~~~~-- 607 (713)
+++| ||.|++++|||||+++||+|+++|++.+.++|+++ .|+. ..|+. .++|++++||+||||++|++|+|+|
T Consensus 235 ~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~~G~~~~~g~~--~~~~~pt~~~~~~~~E~FgPvl~v~~~~~~~ea 311 (397)
T cd07077 235 KFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVVEGLKVPQETK--PLSKETTPSFDDEALESMTPLECQFRVLDVISA 311 (397)
T ss_pred hccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHhcCcCcCCCce--eeEEeccCCCChhhhhhhCceeEEEEEcchHHH
Confidence 7778 99999999999999999999999999998889988 5553 23332 3789999999999999999999996
Q ss_pred --HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCC--CCCCccCcc--ceeeccccCCCcc-cchHh
Q 005131 608 --AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFC--DGARFGLGA--EVGISTSRIHARG-PVGVE 680 (713)
Q Consensus 608 --eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfGG~k--~SG~g~~~~~~~g-~~~l~ 680 (713)
+|++++|+++|||+++|||+|.+++.++++++++|+|+||+++... ..+||||.| .||+|+ ++| ++|++
T Consensus 312 i~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~----~~g~~~~~~ 387 (397)
T cd07077 312 VENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNN----IFGAGVGHD 387 (397)
T ss_pred HHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEccccC----CCCCCCChH
Confidence 6667889999999999999999999999999999999999986554 678999999 899998 889 99999
Q ss_pred hceeEEEEE
Q 005131 681 GLLTTRWIL 689 (713)
Q Consensus 681 ~~~~~k~v~ 689 (713)
+|++.|+|+
T Consensus 388 ~~~~~k~v~ 396 (397)
T cd07077 388 ALRPLKRLV 396 (397)
T ss_pred HhcceeEee
Confidence 999999986
No 120
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=100.00 E-value=3.6e-66 Score=576.71 Aligned_cols=378 Identities=19% Similarity=0.251 Sum_probs=311.4
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHH
Q 005131 288 NEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLA 367 (713)
Q Consensus 288 t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~ 367 (713)
+.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++...++.|++..+ +++ .+.....
T Consensus 6 ~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~-------~~~----~~~~~~~ 74 (488)
T TIGR02518 6 SIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWE-------DKV----IKNVFAA 74 (488)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHH-------HHH----HHHHHHH
Confidence 57899999999999999999999999999999999999999999998666777665432 111 1111234
Q ss_pred HHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHH
Q 005131 368 NSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAIL 445 (713)
Q Consensus 368 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l 445 (713)
..+.+++...+..+.... +++...+.+++|+|||++|+|| ||+.++ +++++||++||+||+|||+.||.++..+
T Consensus 75 ~~~~~~~~~~~~~G~~~~----~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~ 150 (488)
T TIGR02518 75 TIVYDSIKDMKTIGILSE----DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIET 150 (488)
T ss_pred HHHHHHHhhCcccceecC----CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHH
Confidence 444444442222232211 2355678899999999999999 999996 9999999999999999999999999998
Q ss_pred HHHHHHhccc-cCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCCCHH
Q 005131 446 HKIITEVIPE-NVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSADMD 523 (713)
Q Consensus 446 ~~~~~~al~~-glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dADl~ 523 (713)
+++++++|.+ |+|+|+||+|+| +.+.++.|..||+||+|+||||+++++.+++ ..+|+++|+|||||+||++|||+|
T Consensus 151 ~~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a~~-~~~pv~~e~gGn~p~iV~~dADld 229 (488)
T TIGR02518 151 VKLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAAYS-SGTPAIGVGPGNGPAYIERTANVK 229 (488)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH-cCCCEEEEcCCCCeEEEeCCCCHH
Confidence 8888777554 699999999997 4567888888999999999999999988854 589999999999999999999999
Q ss_pred HH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHH-------HH------------------------------
Q 005131 524 MA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDN-------LR------------------------------ 565 (713)
Q Consensus 524 ~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~-------~~------------------------------ 565 (713)
.| ..++.++++|+||.|+|.+|+|||+++||+|+++|++. ..
T Consensus 230 ~Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~ 309 (488)
T TIGR02518 230 KAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANL 309 (488)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHH
Confidence 99 55666778889999999999999999999999988654 11
Q ss_pred -----hCCCEE-EcCCccccccCC-CCCCCccccccCceEEEEEeCCHHHHHHHHHc----cCCCceeEEEcCCHHHHHH
Q 005131 566 -----SEGVTL-YGGPRASSLLNI-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQ----HGSGHTDCIITNDSEAAEI 634 (713)
Q Consensus 566 -----~~Ga~l-~gg~~~~~~~~v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~----~~~gL~a~v~t~d~~~a~~ 634 (713)
++|+++ +||.. .+ ++++ +++|+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++
T Consensus 310 i~~av~~gakll~gg~~-----~v~~~~~-~~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~ 383 (488)
T TIGR02518 310 AGLTVPEDAKVLIGEQN-----GVGNKNP-YSREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVRE 383 (488)
T ss_pred hccccCCCCEEEEeCCC-----CCCCCCc-cccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHH
Confidence 112222 22210 23 4555 489999999999999999999999998 6999999999999999999
Q ss_pred HHhccCeeeEEEcC---------CCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEECC
Q 005131 635 FLRQVDSAAVFHNA---------STRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGS 692 (713)
Q Consensus 635 ~~~~l~~G~v~iN~---------~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 692 (713)
|++++++|.||||+ ++.+.+++.||.+.+-|++.+ .+.|+++|++.|+|.++.
T Consensus 384 f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~-----~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 384 FALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS-----DNITPENLINIRRVAYGV 445 (488)
T ss_pred HHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC-----CCCCHHHhheeeEEEecc
Confidence 99999999999994 455667777888888888873 389999999999999987
No 121
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=1.9e-65 Score=561.91 Aligned_cols=376 Identities=22% Similarity=0.292 Sum_probs=301.6
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHH-HH
Q 005131 292 AREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLAN-SV 370 (713)
Q Consensus 292 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~-~l 370 (713)
+++|+++|++||+.|+++|.++|.++|++++++|++++++|++....+.|++..+.. ..++...++ .+
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~-----------~~e~~~~~~~~~ 69 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDK-----------VIKNHFASEYVY 69 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHH-----------HHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999877777776654310 135666666 67
Q ss_pred HHHhcccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHHHHHHHH
Q 005131 371 RVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSNAILHKI 448 (713)
Q Consensus 371 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~ 448 (713)
++++.. +..+.... ..+...+++++|+|||++|+|| ||++++ ++++|||++||+||+|||+.+|+++.+++++
T Consensus 70 ~~~~~~-~~~g~~~~----~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~ 144 (436)
T cd07122 70 NDIKDM-KTVGVIEE----DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKI 144 (436)
T ss_pred HHHhcC-cceeeecc----CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHH
Confidence 777752 22222111 1244567899999999999999 999985 9999999999999999999999999999999
Q ss_pred HHHhccc-cCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCCCHHHH-
Q 005131 449 ITEVIPE-NVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSADMDMA- 525 (713)
Q Consensus 449 ~~~al~~-glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dADl~~A- 525 (713)
++++|.+ |+|+|+||+|+| +.++++.|..||+||+|+||||+++++..+. ..+|+++|+|||||+||++|||++.|
T Consensus 145 ~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~a~~-~~~~~~~elgG~~p~iV~~dADl~~A~ 223 (436)
T cd07122 145 MREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKAAYS-SGKPAIGVGPGNVPAYIDETADIKRAV 223 (436)
T ss_pred HHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHHHHh-cCCCEEEecCCCCeEEEcCCCCHHHHH
Confidence 9877543 699999999997 5678888888999999999999999877544 48999999999999999999999999
Q ss_pred HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHH----------------hCCCEE----EcCCcc------cc
Q 005131 526 KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLR----------------SEGVTL----YGGPRA------SS 579 (713)
Q Consensus 526 ~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~----------------~~Ga~l----~gg~~~------~~ 579 (713)
..+++++|+|+||.|++++|+|||+++||+|+++|++... +.|+.+ .++... +.
T Consensus 224 ~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~ 303 (436)
T cd07122 224 KDIILSKTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGI 303 (436)
T ss_pred HHHHHHhhccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCC
Confidence 6778888999999999999999999999999999864321 223222 111100 11
Q ss_pred c------------cCC-CCCCCccccccCceEEEEEeCCHHHHHHHHHcc----CCCceeEEEcCCHHHHHHHHhccCee
Q 005131 580 L------------LNI-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQH----GSGHTDCIITNDSEAAEIFLRQVDSA 642 (713)
Q Consensus 580 ~------------~~v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~----~~gL~a~v~t~d~~~a~~~~~~l~~G 642 (713)
+ .++ ++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|..+++++++++++|
T Consensus 304 ~~~~ga~vl~~~~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG 382 (436)
T cd07122 304 EVPEDTKVLVAEETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVS 382 (436)
T ss_pred CCCCCCeEEEEecCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCce
Confidence 1 124 678877 56799999999999999999999997 89999999999999999999999999
Q ss_pred eEEEcCCCCC-CCC-----CC----ccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 643 AVFHNASTRF-CDG-----AR----FGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 643 ~v~iN~~~~~-~~~-----~p----fGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+||||+++.+ ..+ +| .||.++-|.. ..+..+..+|++.|+|.+
T Consensus 383 ~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 383 RILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNS-----TSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred EEEEeCCccccccCccCCCCCceeeeeccccCCCc-----CCCCCChHHhheeEeecc
Confidence 9999987542 111 22 2344432222 234478899999998865
No 122
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.2e-66 Score=520.66 Aligned_cols=404 Identities=17% Similarity=0.181 Sum_probs=353.6
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
.+.+|+-+|....- ++.|+|+-+..|++||++|.+.+...|.+.|+.+.+.|-+|+|.+++...+|+|++--
T Consensus 70 cPatg~yLG~fp~~--------~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmv 141 (583)
T KOG2454|consen 70 CPATGKYLGYFPAL--------SPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMV 141 (583)
T ss_pred cCCCcceeeecccC--------ChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhh
Confidence 34577777776554 4889999999999999999999999999999999999999999999888888887753
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHH-HHHHHH
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDAL-VQIAAL 422 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~~~~~ 422 (713)
++.+.|+..+.+.|.+.+..-+.|-+ ..+|.+.... -...+++++|+||++.|.|| ||+.. ...+..
T Consensus 142 ----DAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~------yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiia 211 (583)
T KOG2454|consen 142 ----DASLGEILVTLEKITWTLSEGERWLKPESRPNGRAML------YKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIA 211 (583)
T ss_pred ----hhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhhee------eccceEEEeecceEEEeeecCCchhhhhhHHHH
Confidence 35667777777777777766666544 2333222111 11346899999999999999 99976 477778
Q ss_pred HHHhCCEEEEeCCCCchHHHHHHHHHHHHhcccc-CCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc-
Q 005131 423 AIRSGNGLLLKGGKEAKRSNAILHKIITEVIPEN-VGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST- 500 (713)
Q Consensus 423 ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~g-lP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~- 500 (713)
||.+||++|+|-||.+..++....++++.+|..- -||+++|++++-+++++.|.+|+.|+++.|.||..+++.|++.+
T Consensus 212 AlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AA 291 (583)
T KOG2454|consen 212 ALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAA 291 (583)
T ss_pred HHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhh
Confidence 9999999999999999999999999999997654 99999999999888999999999999999999999999999865
Q ss_pred --CCCeEEecCccceEEEcCCCCHHHHHHHHHHccCCC-CCccccCceEEEcCCCchhHHHHH-----------------
Q 005131 501 --KIPVLGHADGICHIYVDKSADMDMAKQIVLDAKVDY-PAACNAMETLLIHQDLVPTGFNEL----------------- 560 (713)
Q Consensus 501 --~~~v~lElgG~~p~iV~~dADl~~A~~~~~~~~~~~-GQ~C~a~~rv~V~~~i~d~fi~~l----------------- 560 (713)
++|+++|||||+|+||++|||++....+++.+.|.+ ||.|+.++|++||.++||.|+..|
T Consensus 292 k~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~v 371 (583)
T KOG2454|consen 292 KTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRV 371 (583)
T ss_pred hhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCcc
Confidence 699999999999999999999999999999888755 999999999999999999998865
Q ss_pred -----------------HHHHHhCCCEE-EcCCcc-------cccc-C-----C-CCCCCccccccCceEEEEEeCCHHH
Q 005131 561 -----------------IDNLRSEGVTL-YGGPRA-------SSLL-N-----I-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 561 -----------------~~~~~~~Ga~l-~gg~~~-------~~~~-~-----v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
+++|+++||++ +||.+. +.|+ + + ++|.|++||.|||+++++++++.|+
T Consensus 372 DMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh 451 (583)
T KOG2454|consen 372 DMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEH 451 (583)
T ss_pred chhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHH
Confidence 58899999999 888753 2233 2 3 7999999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCC-CCCCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
+|+++|+++|||.++||+.|..++.+++.++++|.|-||+.. .....+||||+|.||+|| ..|.+||+..++.|+
T Consensus 452 ~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGr----FaG~EGLrg~Cn~Ks 527 (583)
T KOG2454|consen 452 VIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGR----FAGIEGLRGCCNVKS 527 (583)
T ss_pred HHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccc----cccHHHHHHHhcccc
Confidence 999999999999999999999999999999999999999984 445779999999999999 999999999999999
Q ss_pred EEEC
Q 005131 688 ILKG 691 (713)
Q Consensus 688 v~~~ 691 (713)
|.+.
T Consensus 528 v~yd 531 (583)
T KOG2454|consen 528 VAYD 531 (583)
T ss_pred eecc
Confidence 9776
No 123
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=100.00 E-value=5.8e-65 Score=568.44 Aligned_cols=394 Identities=17% Similarity=0.160 Sum_probs=313.8
Q ss_pred HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHH
Q 005131 266 KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQ 345 (713)
Q Consensus 266 ~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~ 345 (713)
++++++.++++...+ .++++++|++||+.|+++++.+|.++|++++++|++++++|+....+++|++..
T Consensus 71 ~P~t~~~~~~~~~~~-----------~~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~ 139 (551)
T TIGR02288 71 SPYGVELGVTYPQCD-----------GDALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFM 139 (551)
T ss_pred CCCCCCEEEEEcCCC-----------HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHH
Confidence 566777777765542 499999999999999999999999999999999999999999887777777764
Q ss_pred hcCchhhHhHhhcCHHHHHHHHHHHHHHhc-ccCcccccc---ccccc-cCCceeeeeeccceeEEEEecC-CchHHH-H
Q 005131 346 EGYEKPLLSRLALKSGKISSLANSVRVLAN-MEDPIGHIL---KKTQL-ADGLFLEKTSCPLGVLLIVFES-RPDALV-Q 418 (713)
Q Consensus 346 ~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~---~~~~~-~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~ 418 (713)
+++. .. ...++.+.++.+++++. ..+..+... +.... ......+..++|+|||++|+|| ||++++ +
T Consensus 140 ~a~e------~g-kp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~ 212 (551)
T TIGR02288 140 MAFQ------AG-GPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYP 212 (551)
T ss_pred HHHh------cc-ChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHH
Confidence 4210 00 01255566777887775 333322221 10000 0011223478999999999999 999985 9
Q ss_pred HHHHHHHhCCEEEEeCCCCchHHHHH----HHHHHHHhccccCCCCeEEEecC--CchhHHhhhcCCCccEEEecCCHHH
Q 005131 419 IAALAIRSGNGLLLKGGKEAKRSNAI----LHKIITEVIPENVGERLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNRL 492 (713)
Q Consensus 419 ~~~~ALaaGN~vv~Kps~~~~~~~~~----l~~~~~~al~~glP~g~v~vv~g--~~~~~~~l~~~~~v~~v~fTGs~~~ 492 (713)
+++|||++||+||+|||+.+|+++.+ +.+++.++ |+|+|+||+|+| +.++++.|..||+|++|+||||+++
T Consensus 213 ~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eA---GlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~ 289 (551)
T TIGR02288 213 GLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEA---GFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF 289 (551)
T ss_pred HHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHc---CcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHH
Confidence 99999999999999999999998764 45666666 899999999997 4578999999999999999999999
Q ss_pred HHHHHHhc-CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCC---------CchhHHHHH-
Q 005131 493 VSQIKEST-KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQD---------LVPTGFNEL- 560 (713)
Q Consensus 493 g~~i~~~~-~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~---------i~d~fi~~l- 560 (713)
|++|++.+ .+|+++|||||||+||++|||++.| ..+++++++|+||.|++++|+|||++ +||+|+++|
T Consensus 290 G~~I~~~aa~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~ 369 (551)
T TIGR02288 290 GQWLEQNARQAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLA 369 (551)
T ss_pred HHHHHHhcccCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHH
Confidence 99999876 4999999999999999999999999 66778889999999999999999999 799999987
Q ss_pred ----------------------------HHHHHhCCCEEEcCCc------ccc-ccC-----C--CCCCCccccccCceE
Q 005131 561 ----------------------------IDNLRSEGVTLYGGPR------ASS-LLN-----I--PEPNSFHHEYNSMAC 598 (713)
Q Consensus 561 ----------------------------~~~~~~~Ga~l~gg~~------~~~-~~~-----v--~~~~~~~eE~FgPvl 598 (713)
+++++++|..++||.. .+. |++ + ++|++++||+||||+
T Consensus 370 ~~~~~lvGdp~~~~~~~Gplis~~~~~ri~~a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl 449 (551)
T TIGR02288 370 TAIDGLLGDPARATAVLGAIQSPDTLARIAEARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIA 449 (551)
T ss_pred HHHHHhcCCcccccccccCcCCHHHHHHHHHHHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEE
Confidence 3566777866676643 132 332 2 388999999999999
Q ss_pred EEEEeCCHHHHHHHHHcc--CCC-ceeEEEcCCHHHHHHHHhcc----------CeeeEEEcCCCCCCCCCCccCcccee
Q 005131 599 TIEIVDDVHAAIGHIHQH--GSG-HTDCIITNDSEAAEIFLRQV----------DSAAVFHNASTRFCDGARFGLGAEVG 665 (713)
Q Consensus 599 ~v~~~~~~~eAi~~~N~~--~~g-L~a~v~t~d~~~a~~~~~~l----------~~G~v~iN~~~~~~~~~pfGG~k~SG 665 (713)
+|++|+|+||||+++|++ +|| |+++|||+|.+++.++.+++ ++|.|+||++ .||++.+.||
T Consensus 450 ~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~------~~~~~~~~sg 523 (551)
T TIGR02288 450 FVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQS------AAFSDFHGTG 523 (551)
T ss_pred EEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccC------CCCCCCCCCC
Confidence 999999999999999998 666 99999999999999999999 7777777764 4677777777
Q ss_pred eccccCCCcccchHhhceeEEEEE
Q 005131 666 ISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 666 ~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
.... .+..+.--.|...+.-+
T Consensus 524 ~n~~---a~~~~~~~~~~~~r~~~ 544 (551)
T TIGR02288 524 GNPA---ANASLSDGAFVANRFRV 544 (551)
T ss_pred CCCc---cCCcccchhhhhcceEE
Confidence 7642 44555556666555433
No 124
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.2e-64 Score=598.92 Aligned_cols=386 Identities=18% Similarity=0.243 Sum_probs=320.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHH
Q 005131 285 DPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKIS 364 (713)
Q Consensus 285 ~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~ 364 (713)
...+.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++....++|++..+.. ..++.
T Consensus 7 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~-----------~~~~~ 75 (862)
T PRK13805 7 AVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDK-----------VIKNH 75 (862)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHH-----------HHHHH
Confidence 3457899999999999999999999999999999999999999999999877777776653310 02344
Q ss_pred HHHHHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCchHHH
Q 005131 365 SLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAKRSN 442 (713)
Q Consensus 365 ~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~~~~ 442 (713)
.+++.++++....+..+.. .. ..+...+++++|+|||++|+|| ||+.++ +++++||++||+||+|||+.||.++
T Consensus 76 ~~~~~~~~~~~~~~~~g~~-~~---~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~ 151 (862)
T PRK13805 76 FASEYIYNSYKDEKTVGVI-EE---DDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSS 151 (862)
T ss_pred HHHHHHHHHhcCCCccccc-Cc---CCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHH
Confidence 4555555544322222221 11 1244567899999999999999 999996 8999999999999999999999999
Q ss_pred HHHHHHHHHhcc-ccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCC
Q 005131 443 AILHKIITEVIP-ENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSA 520 (713)
Q Consensus 443 ~~l~~~~~~al~-~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dA 520 (713)
..+++++++++. .|+|+|+||+|+| +.+.++.|..||+||+|+||||++++++.++ .++|+++|+|||||+||++||
T Consensus 152 ~~~~~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a~~-~~~pv~~e~gGk~p~iV~~dA 230 (862)
T PRK13805 152 IAAAKIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVKAAYS-SGKPALGVGAGNVPAYIDKTA 230 (862)
T ss_pred HHHHHHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHHHHHh-cCCCeEEECCCCCeEEEeCCC
Confidence 999999988744 3699999999997 5667888888999999999999999877643 489999999999999999999
Q ss_pred CHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHH---------------HHH----hCCC--EEEcCCc--
Q 005131 521 DMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELID---------------NLR----SEGV--TLYGGPR-- 576 (713)
Q Consensus 521 Dl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~---------------~~~----~~Ga--~l~gg~~-- 576 (713)
|++.| ..+++++++|+||.|+|++|||||+++||+|+++|++ ..+ +.|+ .++||..
T Consensus 231 Dl~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~ 310 (862)
T PRK13805 231 DIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHGAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYK 310 (862)
T ss_pred CHHHHHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhCCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHH
Confidence 99999 6677888999999999999999999999999998842 112 2233 2455431
Q ss_pred ----ccccc------------CC-CCCCCccccccCceEEEEEeCCHHHHHHHHHc----cCCCceeEEEcCCHHHHHHH
Q 005131 577 ----ASSLL------------NI-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQ----HGSGHTDCIITNDSEAAEIF 635 (713)
Q Consensus 577 ----~~~~~------------~v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~----~~~gL~a~v~t~d~~~a~~~ 635 (713)
.+.|+ ++ ++|++++ |+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|
T Consensus 311 ~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~ 389 (862)
T PRK13805 311 IAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEF 389 (862)
T ss_pred HHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHH
Confidence 12221 24 6777776 799999999999999999999988 48999999999999999999
Q ss_pred HhccCeeeEEEcCCC----------CCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEECC
Q 005131 636 LRQVDSAAVFHNAST----------RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGS 692 (713)
Q Consensus 636 ~~~l~~G~v~iN~~~----------~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 692 (713)
++++++|+|+||.++ .+.+++|||| +.||.|+ .+|+.|+++|++.|+|..+.
T Consensus 390 ~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~----~~g~~g~~~~~~~k~v~~~~ 451 (862)
T PRK13805 390 GLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNS----VSENVGAKHLLNIKTVAKRR 451 (862)
T ss_pred HhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCc----CCCCCCHHHhheeeeeeecc
Confidence 999999999999886 5678999998 9999998 67999999999999998754
No 125
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=100.00 E-value=6.1e-63 Score=550.69 Aligned_cols=376 Identities=22% Similarity=0.278 Sum_probs=326.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHH
Q 005131 293 REMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRV 372 (713)
Q Consensus 293 ~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~ 372 (713)
++++++|++|++.|++++.++|.++|+++++.|.+++++|+..+.+++|++..+. ..|+..+++.+++
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~------------~~ei~~~i~~l~~ 68 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEA------------LGEVARAADTFRY 68 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH------------HHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999999988888777654321 2577777888877
Q ss_pred Hhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHH-HHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 005131 373 LAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDAL-VQIAALAIRSGNGLLLKGGKEAKRSNAILHKII 449 (713)
Q Consensus 373 ~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~ 449 (713)
++. .....+.... ....+...+.+++|+|||++|+|| ||+.. .+.+++||++||+||+|||+.+|.++..+.++|
T Consensus 69 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l 146 (432)
T cd07078 69 YAGLARRLHGEVIP--SPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELL 146 (432)
T ss_pred HHHHHHHhcCcccc--ccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence 765 2222222111 112355677899999999999999 99876 599999999999999999999999999999999
Q ss_pred HHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCCCHHHH
Q 005131 450 TEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSADMDMA 525 (713)
Q Consensus 450 ~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dADl~~A 525 (713)
.++ ++|+|++++++|+ ++.++.|..|+++|.|.||||+.+++.|++.+ ++|+++|+||+||+||++|||++.|
T Consensus 147 ~~a---g~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~a 223 (432)
T cd07078 147 AEA---GLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAA 223 (432)
T ss_pred HHc---CCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHH
Confidence 999 8899999999975 44778888899999999999999999998865 4999999999999999999999999
Q ss_pred -HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH----------------------------------HHHHhCCCE
Q 005131 526 -KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI----------------------------------DNLRSEGVT 570 (713)
Q Consensus 526 -~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~----------------------------------~~~~~~Ga~ 570 (713)
..++.++++++||.|++++++|||++++++|+++|+ +++.++|++
T Consensus 224 a~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~ 303 (432)
T cd07078 224 VKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAK 303 (432)
T ss_pred HHHHHHHHHhccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCE
Confidence 667778888999999999999999999999999884 234557888
Q ss_pred E-EcCCcc----ccccC------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhc
Q 005131 571 L-YGGPRA----SSLLN------I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQ 638 (713)
Q Consensus 571 l-~gg~~~----~~~~~------v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~ 638 (713)
+ +||... +.|+. + ++++++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.+++.+
T Consensus 304 ~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~ 383 (432)
T cd07078 304 LLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAER 383 (432)
T ss_pred EEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHh
Confidence 8 777543 34442 2 6789999999999999999999999999999999999999999999999999999
Q ss_pred cCeeeEEEcCCCCC-CCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 639 VDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 639 l~~G~v~iN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
+++|.|+||+++.. .+.+||||+|.||+|+ ++|++|+++|++.|+|+
T Consensus 384 ~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g~----~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 384 LEAGTVWINDYSVGAEPSAPFGGVKQSGIGR----EGGPYGLEEYTEPKTVT 431 (432)
T ss_pred cCcceEEECCCCCCCCCCCCcCCcCcCcCCc----cchHHHHHHhhceEEEE
Confidence 99999999998666 7889999999999998 88999999999999985
No 126
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=100.00 E-value=5.2e-63 Score=554.23 Aligned_cols=391 Identities=16% Similarity=0.146 Sum_probs=314.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHH
Q 005131 290 VGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANS 369 (713)
Q Consensus 290 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~ 369 (713)
.|++++|++|++||+.|+++++.+|.++|++++++|++++++|+..+..++|++..+++.. ....|++.+++.
T Consensus 84 adv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa-------~~~~evd~a~e~ 156 (549)
T cd07127 84 CDPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQA-------GGPHAQDRGLEA 156 (549)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhc-------ccHHHHHHHHHH
Confidence 3899999999999999999999999999999999999999999988888888776432100 001267888888
Q ss_pred HHHHhc-ccCcccccc--ccccc--cCCceeeeeeccceeEEEEecC-CchHH-HHHHHHHHHhCCEEEEeCCCCchHHH
Q 005131 370 VRVLAN-MEDPIGHIL--KKTQL--ADGLFLEKTSCPLGVLLIVFES-RPDAL-VQIAALAIRSGNGLLLKGGKEAKRSN 442 (713)
Q Consensus 370 l~~~a~-~~~~~~~~~--~~~~~--~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~~~~~ALaaGN~vv~Kps~~~~~~~ 442 (713)
++++++ ..+..+... ..... +-....+..++|+||+++|+|| ||++. ..++++||++||+||||||+.+|+++
T Consensus 157 ~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~ 236 (549)
T cd07127 157 VAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPL 236 (549)
T ss_pred HHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhH
Confidence 888776 222211111 00000 0011123478999999999999 99988 48999999999999999999999998
Q ss_pred HHHHHHHHHhccc-cCCCCeEEEecCC--chhHHhhhcCCCccEEEecCCHHHHHHHHHhc-CCCeEEecCccceEEEcC
Q 005131 443 AILHKIITEVIPE-NVGERLIGLVTSR--EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST-KIPVLGHADGICHIYVDK 518 (713)
Q Consensus 443 ~~l~~~~~~al~~-glP~g~v~vv~g~--~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~-~~~v~lElgG~~p~iV~~ 518 (713)
.++.+++.+.|.+ |+|+|+||+|+|. .++++.|..||.|++|+||||+.+|++|++.+ .+|+++|+|||||+||++
T Consensus 237 ~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~~~v~~ElGGkn~~IV~~ 316 (549)
T cd07127 237 AITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQAQVYTEKAGVNTVVVDS 316 (549)
T ss_pred HHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhccCcEEEecCCcCeEEECC
Confidence 7666444444332 7999999999963 56889999999999999999999999999875 589999999999999999
Q ss_pred CCCHHHH-HHHHHHccCCCCCccccCceEEEcCC---------CchhHHHHHH---------------------------
Q 005131 519 SADMDMA-KQIVLDAKVDYPAACNAMETLLIHQD---------LVPTGFNELI--------------------------- 561 (713)
Q Consensus 519 dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~---------i~d~fi~~l~--------------------------- 561 (713)
|||++.| ..+++++|+++||.|++++|+|||++ +||+|+++|+
T Consensus 317 dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l~Gdp~~~~~~~Gpli~~~~~~ 396 (549)
T cd07127 317 TDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGLLADPARAAALLGAIQSPDTLA 396 (549)
T ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHhcCCccccccccCCcCCHHHHH
Confidence 9999999 66788888999999999999999999 8999999873
Q ss_pred --HHHHhCCCEEEcCCcc------cccc--C-----C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccC--C-Ccee
Q 005131 562 --DNLRSEGVTLYGGPRA------SSLL--N-----I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHG--S-GHTD 622 (713)
Q Consensus 562 --~~~~~~Ga~l~gg~~~------~~~~--~-----v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~--~-gL~a 622 (713)
+++++.|+.++||... +.++ + . ++|++++||+||||++|++|+|.||||+++|++. | ||++
T Consensus 397 ri~~a~~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~ 476 (549)
T cd07127 397 RIAEARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTV 476 (549)
T ss_pred HHHHHHhCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceE
Confidence 4566778766777532 3332 2 1 6899999999999999999999999999999984 4 6999
Q ss_pred EEEcCCHHHHHHHHhc-cCee-eEEEcCCCCCCCC--CCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 623 CIITNDSEAAEIFLRQ-VDSA-AVFHNASTRFCDG--ARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 623 ~v~t~d~~~a~~~~~~-l~~G-~v~iN~~~~~~~~--~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+|||+|...++++.++ .++| +++||+....... +||||.+.||.... .+.....-.|...+.-++
T Consensus 477 sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~---a~~~~~~~~fv~~r~~~~ 545 (549)
T cd07127 477 GVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPA---ANAALTDGAFVANRFRVV 545 (549)
T ss_pred EEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcc---cccccchhhhhhcceEEE
Confidence 9999999999999998 5666 8999955444333 55999999999863 566677777877665443
No 127
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=100.00 E-value=7.6e-61 Score=522.32 Aligned_cols=355 Identities=23% Similarity=0.269 Sum_probs=312.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHHHHhc-c
Q 005131 298 AARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVRVLAN-M 376 (713)
Q Consensus 298 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~~~a~-~ 376 (713)
+|++||++|++++.++|.++|+++++.|.++.++|++....++|++..+. ..|+...++.+++++. .
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~------------~~ev~~~~~~l~~~~~~~ 69 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEA------------LGEVARAIDTFRYAAGLA 69 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH------------HHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999988777777654331 2678888888888776 3
Q ss_pred cCccccccccccccCCceeeeeeccceeEEEEecC-CchHH-HHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhcc
Q 005131 377 EDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDAL-VQIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIP 454 (713)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~ 454 (713)
.+..+.... ....+...+.+++|+|||++|.|| ||+.. .+.+++||++||+||+|||+.+|.++..+++++.++
T Consensus 70 ~~~~~~~~~--~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~a-- 145 (367)
T cd06534 70 DKLGGPELP--SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEA-- 145 (367)
T ss_pred HHhcCCccc--ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhc--
Confidence 322221111 112456678899999999999999 99986 599999999999999999999999999999999999
Q ss_pred ccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCCCHHHH-HHHH
Q 005131 455 ENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSADMDMA-KQIV 529 (713)
Q Consensus 455 ~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dADl~~A-~~~~ 529 (713)
++|+|++++++|+ ++.++.|..|+++|.|.||||+++++.|.+.+ .+|+++|+||+||+||++|||++.| ..++
T Consensus 146 -g~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~ 224 (367)
T cd06534 146 -GLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAV 224 (367)
T ss_pred -CCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHH
Confidence 8899999999975 45788888899999999999999999999875 4899999999999999999999999 5666
Q ss_pred HHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccCC-CCCCCccccccCceEEEEEeCCHHH
Q 005131 530 LDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLNI-PEPNSFHHEYNSMACTIEIVDDVHA 608 (713)
Q Consensus 530 ~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~v-~~~~~~~eE~FgPvl~v~~~~~~~e 608 (713)
.++++++||.|+++++||||++++|+|+++|+ ++.. .+ +++++++||+||||++|++|+|++|
T Consensus 225 ~~~~~~~gq~C~s~~~v~v~~~~~~~f~~~l~--------tl~~--------~~~~~~~~~~~E~fgPv~~v~~~~~~~e 288 (367)
T cd06534 225 FGAFFNAGQICTAASRLLVHESIYDEFVEKLV--------TVLV--------DVDPDMPIAQEEIFGPVLPVIRFKDEEE 288 (367)
T ss_pred HHHHhcCCCCCCCCcEEEEcHHHHHHHHHhhc--------eeee--------CCCCCCccccCCccCceEEEEecCCHHH
Confidence 77788999999999999999999999999887 3321 22 5678999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCC-CCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 609 AIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 609 Ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
||+++|++++||++||||+|...+.++++++++|.|+||+++.. .+.+||||+|+||+|+ ++|++++++||+.|+
T Consensus 289 ai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~----~~g~~~~~~~~~~k~ 364 (367)
T cd06534 289 AIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGR----EGGPYGLEEYTRTKT 364 (367)
T ss_pred HHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCC----CChHHHHHHhceEEE
Confidence 99999999999999999999999999999999999999998766 7889999999999998 789999999999999
Q ss_pred EE
Q 005131 688 IL 689 (713)
Q Consensus 688 v~ 689 (713)
|.
T Consensus 365 i~ 366 (367)
T cd06534 365 VV 366 (367)
T ss_pred Ee
Confidence 85
No 128
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.4e-58 Score=482.37 Aligned_cols=379 Identities=20% Similarity=0.249 Sum_probs=322.4
Q ss_pred CcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCch
Q 005131 271 ERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEK 350 (713)
Q Consensus 271 e~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 350 (713)
+.+|++..++ ++|+++|++.|.+|++.|..+|+.+|+.+|++++++++.+..+|.....++-||+...+
T Consensus 139 dvVG~V~ea~--------~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~na--- 207 (769)
T COG4230 139 DIVGTVTEAT--------EADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNA--- 207 (769)
T ss_pred HCeeeeeecC--------HHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhH---
Confidence 5678888875 99999999999999999999999999999999999999999998854444444444332
Q ss_pred hhHhHhhcCHHHHHHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHH-HHHHHHHHhC
Q 005131 351 PLLSRLALKSGKISSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALV-QIAALAIRSG 427 (713)
Q Consensus 351 ~~~~~l~~~~~ev~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~-~~~~~ALaaG 427 (713)
+.||++++++||||+. .+++.+. ..+.|+|+|.+|+|| ||+.+. ..++.||++|
T Consensus 208 ---------IAEVREAVDFlrYYA~~ar~~~g~--------------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aG 264 (769)
T COG4230 208 ---------IAEVREAVDFLRYYAGQARDTFGN--------------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAG 264 (769)
T ss_pred ---------HHHHHHHHHHHHHHHHHHhcccCc--------------cccCCCCcEEEECCCCchHHHHHhHHHHHHHcC
Confidence 2899999999999998 5554432 256899999999999 999985 9999999999
Q ss_pred CEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhc------
Q 005131 428 NGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST------ 500 (713)
Q Consensus 428 N~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~------ 500 (713)
|+|+-||+|+||+.+..-+++++++ |+|+|++|+++|+ +.+|..|+.|+++++|.|||||++++.|.++-
T Consensus 265 N~VlAKPAEqTpLIAa~aV~ll~eA---GvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~ 341 (769)
T COG4230 265 NSVLAKPAEQTPLIAAQAVRLLHEA---GVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGR 341 (769)
T ss_pred CccccCccccccHHHHHHHHHHHHc---CCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999 9999999999985 67999999999999999999999999997752
Q ss_pred CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH------------------
Q 005131 501 KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI------------------ 561 (713)
Q Consensus 501 ~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~------------------ 561 (713)
..|++.|.||-|++||+.+|--+++ .+.+.++|-.+||+|++.+.+++++++.|..++.|+
T Consensus 342 ~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDV 421 (769)
T COG4230 342 PIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDV 421 (769)
T ss_pred CCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccc
Confidence 3899999999999999999999999 455555565669999999999999999999888773
Q ss_pred ----------------HHHHhCCCEEE----cCC-ccccccC-----CCCCCCccccccCceEEEEEeC--CHHHHHHHH
Q 005131 562 ----------------DNLRSEGVTLY----GGP-RASSLLN-----IPEPNSFHHEYNSMACTIEIVD--DVHAAIGHI 613 (713)
Q Consensus 562 ----------------~~~~~~Ga~l~----gg~-~~~~~~~-----v~~~~~~~eE~FgPvl~v~~~~--~~~eAi~~~ 613 (713)
+.++..|-.+. .++ ..+.|+. +++..-++.|+|||||.|++|+ ++++.|+-+
T Consensus 422 GPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~I 501 (769)
T COG4230 422 GPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDELQREVFGPVLHVVRYKRDELDEVIDQI 501 (769)
T ss_pred cccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCHHHHHHHhccceeEEEEecHHHHHHHHHHH
Confidence 22333343331 111 1244542 2566677899999999999995 799999999
Q ss_pred HccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCC--CCCCCCccCccceeeccccCCCcccchHhhceeEEEEE
Q 005131 614 HQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 689 (713)
Q Consensus 614 N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~ 689 (713)
|.++||||.+|||+-.+.+.++.+++.+|++|||.... ....+||||.+.||.|-+ .+||.+|..|+..+...
T Consensus 502 NatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPK---AGGp~YL~Rl~~~~p~~ 576 (769)
T COG4230 502 NATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPK---AGGPLYLLRLVSERPWS 576 (769)
T ss_pred hccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCC---CCChHHHHHHHhcCCcC
Confidence 99999999999999999999999999999999998743 346799999999999964 89999999999776543
No 129
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=2e-58 Score=472.66 Aligned_cols=365 Identities=17% Similarity=0.185 Sum_probs=310.5
Q ss_pred CHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHH
Q 005131 288 NEVGAREMAVAARESSR--RLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISS 365 (713)
Q Consensus 288 t~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~ 365 (713)
+..||++|+++|+.||. .|++++..+|.+.|.++|+++++|++||+.....|.|....- .+ ...+..
T Consensus 457 ~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagavytl----------al-kthvgm 525 (881)
T KOG2452|consen 457 QVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTL----------AL-KTHVGM 525 (881)
T ss_pred HhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccceeee----------ee-hhhcCc
Confidence 47899999999999996 699999999999999999999999999997666555543311 11 145666
Q ss_pred HHHHHHHHhc-ccCcccccccccc-ccCCceeeeeeccceeEEEEecC-CchHH-HHHHHHHHHhCCEEEEeCCCCchHH
Q 005131 366 LANSVRVLAN-MEDPIGHILKKTQ-LADGLFLEKTSCPLGVLLIVFES-RPDAL-VQIAALAIRSGNGLLLKGGKEAKRS 441 (713)
Q Consensus 366 ~~~~l~~~a~-~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~~~~~ALaaGN~vv~Kps~~~~~~ 441 (713)
.++.+||||+ .....+...+-+. .++.....++++|+|||++|+|| ||+++ .|+.+.||++- ++
T Consensus 526 si~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~---~~--------- 593 (881)
T KOG2452|consen 526 SIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ---VL--------- 593 (881)
T ss_pred eehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH---Hh---------
Confidence 7888999987 5555565555332 23444678899999999999999 99988 59999999852 11
Q ss_pred HHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc----CCCeEEecCccceEEE
Q 005131 442 NAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST----KIPVLGHADGICHIYV 516 (713)
Q Consensus 442 ~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~----~~~v~lElgG~~p~iV 516 (713)
+++.-. | ++|+++| ++.+|+-|..||+|++|-||||+++|+.||+++ .|+|+|||||++|+|+
T Consensus 594 -----k~~e~s---g----vini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~ii 661 (881)
T KOG2452|consen 594 -----KFAELT---G----VVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFII 661 (881)
T ss_pred -----hhhhhc---c----eEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEE
Confidence 222222 4 9999997 588999999999999999999999999999976 3999999999999999
Q ss_pred cCCCCHHHHHHHHHHc-cCCCCCccccCceEEEcCCCchhHHHHHH----------------------------------
Q 005131 517 DKSADMDMAKQIVLDA-KVDYPAACNAMETLLIHQDLVPTGFNELI---------------------------------- 561 (713)
Q Consensus 517 ~~dADl~~A~~~~~~~-~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~---------------------------------- 561 (713)
+.||||+.|+....++ ||+.|..|++..|+||..+|+|+|+.+++
T Consensus 662 fad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~ 741 (881)
T KOG2452|consen 662 FADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYC 741 (881)
T ss_pred EecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHH
Confidence 9999999998877776 66789999999999999999999999884
Q ss_pred HHHHhCCCEE-EcCCc---cccccC------C-CCCCCccccccCceEEEEEeC--CHHHHHHHHHccCCCceeEEEcCC
Q 005131 562 DNLRSEGVTL-YGGPR---ASSLLN------I-PEPNSFHHEYNSMACTIEIVD--DVHAAIGHIHQHGSGHTDCIITND 628 (713)
Q Consensus 562 ~~~~~~Ga~l-~gg~~---~~~~~~------v-~~~~~~~eE~FgPvl~v~~~~--~~~eAi~~~N~~~~gL~a~v~t~d 628 (713)
+.+++.||++ +||.+ .+.|++ + ..|-+..||-||||+.|.+|+ |+|+.++.+|+++|||+++|||+|
T Consensus 742 ~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd 821 (881)
T KOG2452|consen 742 QHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRD 821 (881)
T ss_pred HHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecc
Confidence 4566789999 88865 345553 3 467788999999999999996 689999999999999999999999
Q ss_pred HHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEEEEEC
Q 005131 629 SEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKG 691 (713)
Q Consensus 629 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~ 691 (713)
...+.++++.+.+|+|+||...--+...||||+|+||+|. ..|...|.+|+..|+|++.
T Consensus 822 ~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgk----d~ge~alneyl~~ktit~e 880 (881)
T KOG2452|consen 822 INKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGK----DLGEAALNEYLRVKTVTFE 880 (881)
T ss_pred cchhhhhhhhhccceEEEeeccccccccCCCCcccccccc----chhHHHHhhheeeEEEEee
Confidence 9999999999999999999987778889999999999998 8899999999999999875
No 130
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.7e-55 Score=447.24 Aligned_cols=408 Identities=42% Similarity=0.735 Sum_probs=388.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHH
Q 005131 290 VGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANS 369 (713)
Q Consensus 290 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~ 369 (713)
.++.+..++|++|......++.++|.+.|..+|+.|+++.++|..++.+|+..++..++++++++||.++...++.+++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 36788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCccccccccccccCCceeeeeeccceeEEEEecCCchHHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 005131 370 VRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFESRPDALVQIAALAIRSGNGLLLKGGKEAKRSNAILHKII 449 (713)
Q Consensus 370 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~~P~~~~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~ 449 (713)
++..+.+++|.|++...+..++|.+.+.+|.|+||+++|...+|..+....+.||++||+||+|.+..+..++..+.+++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIYEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i 162 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVI 162 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEEecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHH
Confidence 99999999999999988888999999999999999999999999999988888999999999999999999999999999
Q ss_pred HHhcccc-CCCCeEEEecC--CchhHHhhhcCCCccEEEecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCCCHHHHH
Q 005131 450 TEVIPEN-VGERLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSADMDMAK 526 (713)
Q Consensus 450 ~~al~~g-lP~g~v~vv~g--~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dADl~~A~ 526 (713)
+++|.+. +|++.||+|+. ++++.++|..+..||.|+..||....+.|.+.+..||+-.+-|+|.+||+++||+|.|.
T Consensus 163 ~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~vPVi~~~~G~CHiyvd~~ADld~A~ 242 (417)
T COG0014 163 QEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENATVPVIEHGVGNCHIYVDESADLDKAL 242 (417)
T ss_pred HHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCcCCEEecCcceEEEEecccCCHHHHH
Confidence 9997654 99999999995 58899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccC---C-CCCCCccccccCceEEEEE
Q 005131 527 QIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLN---I-PEPNSFHHEYNSMACTIEI 602 (713)
Q Consensus 527 ~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~---v-~~~~~~~eE~FgPvl~v~~ 602 (713)
+++..++......|++.+.++||+.+.++|+.+|.+.+.+.|.++.|++.....++ . .....|..|+..+++.|..
T Consensus 243 ~ii~nAKtqrPs~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gvelr~d~~~~~~~~~~~~~A~e~Dw~tEyLd~ilavkv 322 (417)
T COG0014 243 KIIVNAKTQRPSVCNAAETLLVHRAIAKSFLPKLANALQEAGVELRGDAEALALLPDAVKPATEEDWDTEYLDLILAVKV 322 (417)
T ss_pred HHHHcccCCCCcccchHHHHHcCHHHHHHhHHHHHHHHHhcCeEEEcCHHHHHhccccCCCCchhhHHHHhhhheeEEEE
Confidence 99999999999999999999999999999999999999999999988765433332 3 4567899999999999999
Q ss_pred eCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhc
Q 005131 603 VDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 682 (713)
Q Consensus 603 ~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~ 682 (713)
++++||||+++|.++.+||-+|.|+|...+++|..++++..||||.+|+|.++.-||-+.+-|++.+|.|.+||.||+++
T Consensus 323 Vd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~L 402 (417)
T COG0014 323 VDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEAL 402 (417)
T ss_pred eCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEECCCeeec
Q 005131 683 LTTRWILKGSGQVVD 697 (713)
Q Consensus 683 ~~~k~v~~~~~~~~~ 697 (713)
|.+|+|.++.||+|+
T Consensus 403 Ts~Kyiv~G~Gqvr~ 417 (417)
T COG0014 403 TSYKYIVRGDGQVRP 417 (417)
T ss_pred cceeEEEeCCceecC
Confidence 999999999999884
No 131
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-54 Score=441.38 Aligned_cols=386 Identities=16% Similarity=0.157 Sum_probs=315.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHH
Q 005131 285 DPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALE-ANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKI 363 (713)
Q Consensus 285 ~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev 363 (713)
.-++..++++||++|.+|++.|..+|..+|.+|+++.|++|. +++-+|...+....++...++ + +.-+
T Consensus 91 ~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qA-------e----iDa~ 159 (561)
T KOG2455|consen 91 YYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQA-------E----IDAA 159 (561)
T ss_pred eeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHH-------H----HHHH
Confidence 344688999999999999999999999999999999999998 777777766665556555431 1 1224
Q ss_pred HHHHHHHHHHhc-ccCccccccccccccCCceeeeeeccc-eeEEEEecC-CchHHH-HHHHHHHHhCCEEEEeCCCCch
Q 005131 364 SSLANSVRVLAN-MEDPIGHILKKTQLADGLFLEKTSCPL-GVLLIVFES-RPDALV-QIAALAIRSGNGLLLKGGKEAK 439 (713)
Q Consensus 364 ~~~~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~-~P~~~~-~~~~~ALaaGN~vv~Kps~~~~ 439 (713)
.+.++++|+.+. +.+......... ..+......++|+ |.|++|+|| |-.... +..+|||+ ||+|+||||..+.
T Consensus 160 ~eLidf~R~na~ya~eL~~~qpi~~--~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~VLwkPS~ta~ 236 (561)
T KOG2455|consen 160 AELIDFFRFNAKYASELYAQQPISQ--TKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAA 236 (561)
T ss_pred HHHHHHHHHhHHHHHHhhhcCCccc--cCCCCcceeeccccceeEEecccceeeeccccccChhhh-cceeeecccchhH
Confidence 467888888776 433332222111 2455566788898 999999999 766554 88899998 9999999999999
Q ss_pred HHHHHHHHHHHHhccccCCCCeEEEecC-CchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---------CCCeEEecC
Q 005131 440 RSNAILHKIITEVIPENVGERLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---------KIPVLGHAD 509 (713)
Q Consensus 440 ~~~~~l~~~~~~al~~glP~g~v~vv~g-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---------~~~v~lElg 509 (713)
++++++.++++|| |||+|++|+|++ +..+++.+..+|.+.++.||||+.+-|.+.+.- -.+++.|+|
T Consensus 237 lssYii~~il~EA---GlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcg 313 (561)
T KOG2455|consen 237 LSSYIIYRILREA---GLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECG 313 (561)
T ss_pred HHHHHHHHHHHHc---CCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCC
Confidence 9999999999999 999999999997 478899999999999999999999988887642 388999999
Q ss_pred ccceEEEcCCCCHHHHH-HHHHHccCCCCCccccCceEEEcCCCchhHHHHHH---------------------------
Q 005131 510 GICHIYVDKSADMDMAK-QIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------------------- 561 (713)
Q Consensus 510 G~~p~iV~~dADl~~A~-~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------------------- 561 (713)
|||..+|+++||++.++ ..+.++|-.+||.|+|.+|+||+++.|..+.++|+
T Consensus 314 GkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~s 393 (561)
T KOG2455|consen 314 GKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKS 393 (561)
T ss_pred CcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHH
Confidence 99999999999999994 55666666789999999999999999998877762
Q ss_pred --------HHHHhC-CCEE-EcCCcc---ccccC-----C--CCCCCccccccCceEEEEEeC--CHHHHHHHH-HccCC
Q 005131 562 --------DNLRSE-GVTL-YGGPRA---SSLLN-----I--PEPNSFHHEYNSMACTIEIVD--DVHAAIGHI-HQHGS 618 (713)
Q Consensus 562 --------~~~~~~-Ga~l-~gg~~~---~~~~~-----v--~~~~~~~eE~FgPvl~v~~~~--~~~eAi~~~-N~~~~ 618 (713)
+.++.. -..+ +||.-+ ++|++ + |.+++|.||+|||||+|+.|+ +++|+++++ |.++|
T Consensus 394 F~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~Y 473 (561)
T KOG2455|consen 394 FARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPY 473 (561)
T ss_pred HHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcc
Confidence 122111 1233 777643 45654 2 789999999999999999996 589999988 67899
Q ss_pred CceeEEEcCCHHHHHHHHhccC--eeeEEEcCC-CCC-CCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 619 GHTDCIITNDSEAAEIFLRQVD--SAAVFHNAS-TRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 619 gL~a~v~t~d~~~a~~~~~~l~--~G~v~iN~~-~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
|||.+||++|.+...+..++++ +|+.|||+- ++. ...+||||.+.||...+ .+|++.+..|+.+++|--
T Consensus 474 aLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDK---aGgp~~l~RwtSp~~ikE 546 (561)
T KOG2455|consen 474 ALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDK---AGGPHYLLRWTSPLSIKE 546 (561)
T ss_pred eeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCC---CCCceEEEeecCcchhhh
Confidence 9999999999999999988665 899999986 444 36799999999999974 899999999999887743
No 132
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.3e-53 Score=419.69 Aligned_cols=390 Identities=18% Similarity=0.218 Sum_probs=345.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHH
Q 005131 288 NEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLA 367 (713)
Q Consensus 288 t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~ 367 (713)
+.+|.+.+++.|++|++.|-..|...|.++.+++.|.|+...+-|......++++...++. .|+++.+
T Consensus 53 sv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaegv------------gevqeyv 120 (507)
T KOG2453|consen 53 SVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEGV------------GEVQEYV 120 (507)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhcc------------hhHHHHH
Confidence 4899999999999999999999999999999999999999999998888888888877764 7999999
Q ss_pred HHHHHHhcccC-ccccccccccccCCceeeeeeccceeEEEEecC-CchHH-HHHHHHHHHhCCEEEEeCCCCchHHHHH
Q 005131 368 NSVRVLANMED-PIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDAL-VQIAALAIRSGNGLLLKGGKEAKRSNAI 444 (713)
Q Consensus 368 ~~l~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~-~~~~~~ALaaGN~vv~Kps~~~~~~~~~ 444 (713)
+.+.|...+.+ ..+...+.. .+|+.....+-|+|+|++|+.| ||-.. -|..+.|+.+||+|+|||++++|+++..
T Consensus 121 dicdyavglsr~l~g~i~pse--rpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiA 198 (507)
T KOG2453|consen 121 DICDYAVGLSRSLEGKIFPSE--RPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIA 198 (507)
T ss_pred HHHHHhhhhhhhhCCcccCCC--CCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHH
Confidence 99998777544 445555432 3566667789999999999999 99876 4666669999999999999999999999
Q ss_pred HHHHHHHhcccc-CCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhc---CCCeEEecCccceEEEcCCC
Q 005131 445 LHKIITEVIPEN-VGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGHADGICHIYVDKSA 520 (713)
Q Consensus 445 l~~~~~~al~~g-lP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lElgG~~p~iV~~dA 520 (713)
..+++.+.|... +|++......|..+.+..+..+.+++.++||||++.++.+.+.- .-+..|||||||+.||++||
T Consensus 199 vtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~eda 278 (507)
T KOG2453|consen 199 VTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDA 278 (507)
T ss_pred HHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEeccc
Confidence 999999998866 99999999889888999999999999999999999999998752 46778999999999999999
Q ss_pred CHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHH----------------------------------HHHHH
Q 005131 521 DMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNEL----------------------------------IDNLR 565 (713)
Q Consensus 521 Dl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l----------------------------------~~~~~ 565 (713)
|+..+ ...++.+.-.+||+|+..+|++||+++||+.+++| +++++
T Consensus 279 dl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak 358 (507)
T KOG2453|consen 279 DLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAK 358 (507)
T ss_pred cceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHH
Confidence 99999 56667777788999999999999999999999988 47788
Q ss_pred hCCCEE-EcCC---ccccccC-----C-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHH
Q 005131 566 SEGVTL-YGGP---RASSLLN-----I-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIF 635 (713)
Q Consensus 566 ~~Ga~l-~gg~---~~~~~~~-----v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~ 635 (713)
+.|.++ +||+ +++.|+. + .|.++..+|.|.|||.|++|++++||+++-|..+.||+++|||+|..++.++
T Consensus 359 ~~ggki~yggkv~er~gnfveptivtl~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw 438 (507)
T KOG2453|consen 359 ASGGKIEYGGKVLERDGNFVEPTIVTLKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRW 438 (507)
T ss_pred hcCCeEEECCEeeccCCCcccceEEEecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhh
Confidence 899998 8885 4567764 2 7999999999999999999999999999999999999999999999999998
Q ss_pred Hh--ccCeeeEEEcCCCC-CCCCCCccCccceeeccccCCCcccchHhhceeEEEEEECCCee
Q 005131 636 LR--QVDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGSGQV 695 (713)
Q Consensus 636 ~~--~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~~~~~~ 695 (713)
.- .-++|.|.||-++. ...+-.|||-|..|-|| +.|.++.++|++..+.+++++.-
T Consensus 439 ~gpkgsdcgivnvniptsgaeiggafggek~tgggr----esgsdswkqymrrstctinyske 497 (507)
T KOG2453|consen 439 MGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGR----ESGSDSWKQYMRRSTCTINYSKE 497 (507)
T ss_pred hCCCCCccceEEecCCCCchhhcccccCccccCCCc----ccCchHHHHHHhhceeeeecccc
Confidence 74 67899999999864 45778899999999999 99999999999999999887643
No 133
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-49 Score=389.88 Aligned_cols=421 Identities=63% Similarity=0.983 Sum_probs=398.2
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHHHHH
Q 005131 292 AREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEENEADVAAAEQEGYEKPLLSRLALKSGKISSLANSVR 371 (713)
Q Consensus 292 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~~l~ 371 (713)
+++..+.||.+++...+++.++|.++|.+++++|..+..++..++.+|+..++..|+.+.++.||.++...++.+...++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccCccccccccccccCCceeeeeeccceeEEEEecCCchHHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHH
Q 005131 372 VLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFESRPDALVQIAALAIRSGNGLLLKGGKEAKRSNAILHKIITE 451 (713)
Q Consensus 372 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~~P~~~~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~ 451 (713)
..+...+|.|++........|...+..-.|+||.++|....|-.++...+.|+++||.+++|....+..+...|.+++++
T Consensus 82 ~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIFESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~ 161 (433)
T KOG4165|consen 82 QIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVIFESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQE 161 (433)
T ss_pred HHHhcccchhhheeeeeccCCceEEEeeccceEEEEEeccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHH
Confidence 99999999999887777778999999999999999999999999988888899999999999999999999999999999
Q ss_pred hcccc-CCCCeEEEecCCchhHHhhhcCCCccEEEecCCHHHHHHHHHhcCCCeEEecCccceEEEcCCCCHHHHHHHHH
Q 005131 452 VIPEN-VGERLIGLVTSREEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTKIPVLGHADGICHIYVDKSADMDMAKQIVL 530 (713)
Q Consensus 452 al~~g-lP~g~v~vv~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~~~v~lElgG~~p~iV~~dADl~~A~~~~~ 530 (713)
|++.- .|.+.+++|+.++++.++|..+..||+|+..||+...|.|.....+||.....|.|.+||++|||++.|.+++.
T Consensus 162 al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tkIPVLGHA~GichvYvd~dad~~kA~riv~ 241 (433)
T KOG4165|consen 162 ALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTKIPVLGHAEGICHVYVDKDADLDKAKRIVR 241 (433)
T ss_pred HhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhcccCcccccccceeEEEeccccCHHHHHHHHh
Confidence 98865 79999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HccCCCCCccccCceEEEcCC-CchhHHHHHHHHHHhCCCEEEcCCccccccCC--CCCCCccccccCceEEEEEeCCHH
Q 005131 531 DAKVDYPAACNAMETLLIHQD-LVPTGFNELIDNLRSEGVTLYGGPRASSLLNI--PEPNSFHHEYNSMACTIEIVDDVH 607 (713)
Q Consensus 531 ~~~~~~GQ~C~a~~rv~V~~~-i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~v--~~~~~~~eE~FgPvl~v~~~~~~~ 607 (713)
.++.+..-.|+|.+.+++|++ ....|++.+++-++++|.++.+|++...+..+ |...-++.|+-.-.+++-.+++.+
T Consensus 242 DaK~dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~~~gVtl~agpkl~~~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~ 321 (433)
T KOG4165|consen 242 DAKCDYPAACNAMETLLIHKDLEQSPFFDDLINMLKEEGVTLHAGPKLAALLKFSPPEAKSFNTEYGSLECTIEVVDSVQ 321 (433)
T ss_pred cccCCCchhhhhHHHHhccHhhhhcchHHHHHHHHHhcCeEEecChhHHhhcCcCCchhhhhhhhhcchheeeeecccHH
Confidence 999999999999999999999 45579999999999999999888876655555 667788999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCCCCCCCCCCccCccceeeccccCCCcccchHhhceeEEE
Q 005131 608 AAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 687 (713)
Q Consensus 608 eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~ 687 (713)
+||+.+|.++.+||-+|.|+|...|++|.+.+++..||+|.+++|.++.-||-+.+-|++.+|.|.+||.|++.++.+||
T Consensus 322 ~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw 401 (433)
T KOG4165|consen 322 SAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKW 401 (433)
T ss_pred HHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCeeec---CCCCcccccccccCC
Q 005131 688 ILKGSGQVVD---GDKGVEYIHEDVNIE 712 (713)
Q Consensus 688 v~~~~~~~~~---~~~~~~~~~~~~~~~ 712 (713)
+.++.+++.. +..+..|+||++||+
T Consensus 402 ~lRG~gqvvsd~~~~G~~~y~H~~l~i~ 429 (433)
T KOG4165|consen 402 LLRGKGQVVSDFNEGGKRAYLHEDLPID 429 (433)
T ss_pred EEecCCceeccccCCCceeeeecCCChh
Confidence 9999999985 677999999999986
No 134
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=100.00 E-value=1.4e-39 Score=337.44 Aligned_cols=272 Identities=57% Similarity=0.832 Sum_probs=232.6
Q ss_pred hhhhhccceEEEEeCccceecCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCc-------c
Q 005131 5 RAFVKDVKRIVVKVGTAVVTRSDG-RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINS-------S 76 (713)
Q Consensus 5 ~~~~~~~~~iViKlGGs~l~~~~~-~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~-------~ 76 (713)
|..|.+.+++|||+|||+|+++++ +++.+.+..++++|+.+++.|+++|||.||+.++|+.++..+..... .
T Consensus 2 ~~~~~~~~~iVvKiGss~lt~~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVssGAv~~G~~~l~~~~~~~~~~~~~~~g 81 (284)
T cd04256 2 RSELKHAKRIVVKLGSAVVTREDECGLALGRLASIVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKS 81 (284)
T ss_pred chhhccCCEEEEEeCchhccCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeeCcHHhChHHhhhccccccchhhhccc
Confidence 455777899999999999999876 89999999999999999999999999999999999998876542111 1
Q ss_pred cccccCccccchHHHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCce
Q 005131 77 FADLQKPQIELDGKACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAV 156 (713)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v 156 (713)
....+.....+++++++++||..++.++.+.|.+.++.+.|+++|.+|+.+...+.+..+.|+.+|+.|+|||+++||+|
T Consensus 82 ~~~~~~~~~~~~~qa~aa~gq~~L~~~y~~~f~~~~~~~~q~llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVi~~nD~v 161 (284)
T cd04256 82 GQLKDMPQMELDGRACAAVGQSGLMALYEAMFTQYGITVAQVLVTKPDFYDEQTRRNLNGTLEELLRLNIIPIINTNDAV 161 (284)
T ss_pred ccccCCcchhHHHHHHHHcccHHHHHHHHHHHHHcCCcHHHeeeeccccccHHHHHHHHHHHHHHHHCCCEEEEeCCCcc
Confidence 11223334457789999999999999999999999999999999999999999888888999999999999999999999
Q ss_pred ecCCCcccCCCC--cccchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccC
Q 005131 157 STRKAPYEDSSG--IFWDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRG 234 (713)
Q Consensus 157 ~~~~~~~~~~~g--~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g 234 (713)
...........+ .++|+|++|+++|.+++||+|+|+|||||||++||..|++++|++++..+...+ ..+....+++|
T Consensus 162 ~~~~~~~~~~~~~~~i~d~D~lAa~lA~~l~Ad~Li~lTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~-~~~~~s~~gtG 240 (284)
T cd04256 162 SPPPEPDEDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPGSDDAKLIHTFYPGDQQSI-TFGTKSRVGTG 240 (284)
T ss_pred cccccccccccccccccChHHHHHHHHHHcCCCEEEEEeCCCeeecCCCCCCCCeEcccccHhHHHHh-hcccccCcccC
Confidence 864322111112 348999999999999999999999999999999997689999999998776543 33334557899
Q ss_pred chHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 235 GMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 235 ~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
||.+||+++..+.++|++++|+++..|+.+.+++.|+..||.+
T Consensus 241 GM~~Kl~Aa~~a~~~Gi~v~I~~G~~~~~i~~~l~G~~~GT~~ 283 (284)
T cd04256 241 GMEAKVKAALWALQGGTSVVITNGMAGDVITKILEGKKVGTFF 283 (284)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCccHHHHHHcCCCCCEEe
Confidence 9999999999999999999999999999999999999999987
No 135
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=308.48 Aligned_cols=279 Identities=57% Similarity=0.840 Sum_probs=253.3
Q ss_pred hhhhhhccceEEEEeCccceecCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccC
Q 005131 4 SRAFVKDVKRIVVKVGTAVVTRSDG-RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQK 82 (713)
Q Consensus 4 ~~~~~~~~~~iViKlGGs~l~~~~~-~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~ 82 (713)
+|+++++.++||||+|.++++++++ .+-+..+..+++++.++++.|++++||.+|+-.+|.+.+......+..++.+-.
T Consensus 2 ~r~~~kka~rIVVKLGSavit~e~~~~laLgrla~IVEqV~~L~~~G~evilVSSGaVA~G~qrLr~~~~~s~s~r~~l~ 81 (285)
T KOG1154|consen 2 KRAFLKKAYRIVVKLGSAVITREDTCGLALGRLASIVEQVSELQRMGREVILVSSGAVAFGRQRLRQELLPSSSMRQTLK 81 (285)
T ss_pred cchhhccceEEEEEecceEEECCCCccchHHHHHHHHHHHHHHHhcCceEEEEecchhhhhHHHhhhhhccchhHHHhhC
Confidence 5788899999999999999999887 688889999999999999999999999999999999988888887777887555
Q ss_pred cccc-chHHHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCC
Q 005131 83 PQIE-LDGKACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKA 161 (713)
Q Consensus 83 ~~~~-l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~ 161 (713)
..+. ...++++++||.+++++++.+|.++++..+|+++|+.|+.+...+++...+|+.+|..++|||++.+|.|....+
T Consensus 82 ~~~~l~e~rA~AAvGQ~~Lmalye~lF~Qy~~~iAQvLvT~~Di~d~~~r~Nl~~Ti~eLL~m~viPIvNeNDavs~~~~ 161 (285)
T KOG1154|consen 82 PQSELAEKRACAAVGQSGLMALYETLFTQYGITIAQVLVTRNDILDEQQRKNLQNTISELLSMNVIPIVNENDAVSPREI 161 (285)
T ss_pred CccchhhHHHHHHhCcchHHHHHHHHHHHhccchheeeecCcchhhHHHHHHHHHHHHHHHhCCceeeecCCCccCCccc
Confidence 4444 445699999999999999999999999999999999999999999999999999999999999999999999776
Q ss_pred cccCCCCcccchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHH
Q 005131 162 PYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVK 241 (713)
Q Consensus 162 ~~~~~~g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~ 241 (713)
++.+.. |||++|+.+|.+++||.|+++|||||+||++|.....++|...+..+..--+.+|+++..++|||..|+.
T Consensus 162 ~~~D~~----dNDsLsA~laaei~ADlLilLsDVdglYt~PPd~~~~~li~~~~~~~~~v~~tfG~~SkvGtGGM~tKv~ 237 (285)
T KOG1154|consen 162 PFGDSS----DNDSLAAILAAEIKADLLILLSDVDGLYTGPPDADPSKLIHTFSPGDPQVSTTFGSKSKVGTGGMETKVK 237 (285)
T ss_pred ccCCCC----cccHHHHHHHHHhccCEEEEEecccccccCCCCCCcceeeeeeccCCCCCccccCccCccCcCcchhhHH
Confidence 655433 6999999999999999999999999999987766669999999999988668999999999999999999
Q ss_pred HHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEecCCCCCCC
Q 005131 242 AAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQDAHILDP 286 (713)
Q Consensus 242 aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~~~~~~~ 286 (713)
+|..|...|+++.|++|..|+++.+++.|..+||.+....+.|.+
T Consensus 238 AA~~A~~~Gv~viI~~g~~p~~I~~iv~g~kvgt~f~~~~~~~~p 282 (285)
T KOG1154|consen 238 AAVNALNAGVSVIITNGDAPENITDIVEGKKVGTFFEQLKRLEVP 282 (285)
T ss_pred HHHHHhcCCceEEEeCCCChHHHHHHHhhhhhhhhhhhcccccCC
Confidence 999999999999999999999999999999999998876444443
No 136
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=2.6e-39 Score=333.57 Aligned_cols=260 Identities=42% Similarity=0.652 Sum_probs=223.7
Q ss_pred hhhhhhccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCc
Q 005131 4 SRAFVKDVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKP 83 (713)
Q Consensus 4 ~~~~~~~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~ 83 (713)
+|..+++|+++|||||||+|++++++++.+.+++++++|+.+++.|+++|||.||+.++|+.++...... .++
T Consensus 2 ~~~~~~~~~~iViK~Ggs~l~~~~~~~~~~~i~~~~~~I~~~~~~g~~vvlV~Sga~~~g~~~l~~~~~~----~~~--- 74 (266)
T PRK12314 2 MRRQLENAKRIVIKVGSSTLSYENGKINLERIEQLVFVISDLMNKGKEVILVSSGAIGAGLTKLKLDKRP----TSL--- 74 (266)
T ss_pred hhhhHhhCCEEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeeCcccccceeeccccCC----CCH---
Confidence 4556777899999999999998887899999999999999999999999999888889998765432111 111
Q ss_pred cccchHHHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcc
Q 005131 84 QIELDGKACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPY 163 (713)
Q Consensus 84 ~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~ 163 (713)
-..+++.++||..+..++...|.+.|++++|+++|.+++.+...+.+..+.|+.+++.|+|||++++|.+...+.
T Consensus 75 ---~~~~a~aa~Gq~~l~~~~~~~~~~~g~~~~q~llT~~~~~~~~~~~~~~~~l~~ll~~g~IPVv~~nd~v~~~~~-- 149 (266)
T PRK12314 75 ---AEKQALAAVGQPELMSLYSKFFAEYGIVVAQILLTRDDFDSPKSRANVKNTFESLLELGILPIVNENDAVATDEI-- 149 (266)
T ss_pred ---HHHHHHHHHhHHHHHHHHHHHHHHcCCeEEEEEEecccccchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeeccc--
Confidence 125799999999999999999999999999999999999988888888899999999999999999899877432
Q ss_pred cCCCCcccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeec--cccchhhhcCCCCccccCchHHHH
Q 005131 164 EDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVK--ERHQGEITFGDKSRVGRGGMTAKV 240 (713)
Q Consensus 164 ~~~~g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~--~e~~~~~~~~~~~~~~~g~m~~Kl 240 (713)
+..+++||++|++||.+|+||+|+|+|||||||++|| .+|++++|++|++ .+..++. .+....+++|+|.+|+
T Consensus 150 ---~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~~~a~~i~~I~~~~~~~~~~~-~~~~~~~~tGGM~~Kl 225 (266)
T PRK12314 150 ---DTKFGDNDRLSAIVAKLVKADLLIILSDIDGLYDKNPRINPDAKLRSEVTEITEEILALA-GGAGSKFGTGGMVTKL 225 (266)
T ss_pred ---cceecchHHHHHHHHHHhCCCEEEEEeCCCcccCCCCCCCCCCeEEEEecCCCHHHHHHh-ccCCCCcccCchHHHH
Confidence 1225789999999999999999999999999999999 7899999999986 3333322 2233457899999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEec
Q 005131 241 KAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQ 279 (713)
Q Consensus 241 ~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~ 279 (713)
+++..+.++|++++|++++.|+++.+++.|+..||++.+
T Consensus 226 ~aa~~a~~~gv~v~I~~g~~~~~i~~~l~g~~~GT~i~~ 264 (266)
T PRK12314 226 KAAKFLMEAGIKMVLANGFNPSDILDFLEGESIGTLFAP 264 (266)
T ss_pred HHHHHHHHCCCeEEEEcCCCchHHHHHHcCCCCceEEcc
Confidence 999999999999999999999999999999999999976
No 137
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-38 Score=324.50 Aligned_cols=255 Identities=42% Similarity=0.665 Sum_probs=230.5
Q ss_pred hhccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccc
Q 005131 8 VKDVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIEL 87 (713)
Q Consensus 8 ~~~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 87 (713)
+++++++|||+|.|+|+++++.++...+..++++++++++.|++||||.||+-.+|...+..... ...+.
T Consensus 3 ~~~~~riVvKiGSs~Lt~~~g~l~~~~l~~l~~~ia~L~~~G~eVilVSSGAiaaG~~~Lg~~~r----p~~l~------ 72 (369)
T COG0263 3 LSSARRIVVKIGSSSLTDGTGGLDRSKLEELVRQVAALHKAGHEVVLVSSGAIAAGRTRLGLPKR----PKTLA------ 72 (369)
T ss_pred CCcceEEEEEECcceeeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEccchhhhChhhcCCCCC----CcchH------
Confidence 56789999999999999998899999999999999999999999999999999999875443221 11222
Q ss_pred hHHHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCC
Q 005131 88 DGKACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSS 167 (713)
Q Consensus 88 ~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~ 167 (713)
.+++++++||..++..+++.|..+|+..+|+++|.+|+.+...+.|...+|..||+.|.|||+++||.|.. .+
T Consensus 73 ~kQA~AAVGQ~~Lm~~y~~~f~~~g~~v~QiLLTr~D~~~r~ry~Nar~Tl~~Ll~~gvVPIINENDtva~-------~E 145 (369)
T COG0263 73 EKQAAAAVGQVRLMQLYEELFARYGIKVGQILLTRDDFSDRRRYLNARNTLSALLELGVVPIINENDTVAT-------EE 145 (369)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHhcCCeeeEEEeehhhhhhHHHHHHHHHHHHHHHHCCceeeecCCCceee-------ee
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999 45
Q ss_pred CcccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeec--cccchhhhcCCCCccccCchHHHHHHHH
Q 005131 168 GIFWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVK--ERHQGEITFGDKSRVGRGGMTAKVKAAV 244 (713)
Q Consensus 168 g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~--~e~~~~~~~~~~~~~~~g~m~~Kl~aa~ 244 (713)
..|+|||++++.+|..++||.|+++||+||+||+|| .+|+|++|+++.- .|.+. +..++.+.++||||..|++++.
T Consensus 146 ikfGDND~LsA~VA~lv~ADlLvlLsDiDGLyd~nPr~~pdAk~i~~V~~it~ei~~-~aggsgs~~GTGGM~TKl~AA~ 224 (369)
T COG0263 146 IKFGDNDTLSALVAILVGADLLVLLSDIDGLYDANPRTNPDAKLIPEVEEITPEIEA-MAGGSGSELGTGGMRTKLEAAK 224 (369)
T ss_pred eeecCCchHHHHHHHHhCCCEEEEEEccCcccCCCCCCCCCCeeehhhcccCHHHHH-HhcCCCCCCCcccHHHHHHHHH
Confidence 578999999999999999999999999999999999 9999999999873 24443 4446677899999999999999
Q ss_pred HHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEecC
Q 005131 245 NAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQD 280 (713)
Q Consensus 245 ~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~ 280 (713)
.|.++|+++.|++|..|+.+.+++.++..||++.+.
T Consensus 225 iA~~aG~~~iI~~g~~~~~i~~~~~~~~~GT~F~~~ 260 (369)
T COG0263 225 IATRAGVPVIIASGSKPDVILDALEGEAVGTLFEPQ 260 (369)
T ss_pred HHHHcCCcEEEecCCCcchHHHHHhCCCCccEEecC
Confidence 999999999999999999999999999999999974
No 138
>PRK13402 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=1.2e-37 Score=332.43 Aligned_cols=254 Identities=38% Similarity=0.548 Sum_probs=219.6
Q ss_pred hhccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccc
Q 005131 8 VKDVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIEL 87 (713)
Q Consensus 8 ~~~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 87 (713)
|..|+++|||||||+|+++++.++.+.+..++++|+.+++.|+++||||||+..+|...+.. .+ ..+. -
T Consensus 2 ~~~~kriVIKiGgs~L~~~~~~l~~~~i~~la~~I~~l~~~G~~vvlVsSGava~G~~~l~~---~~----~~~~----~ 70 (368)
T PRK13402 2 DSNWKRIVVKVGSSLLTPHHQGCSSHYLLGLVQQIVYLKDQGHQVVLVSSGAVAAGYHKLGF---ID----RPSV----P 70 (368)
T ss_pred CCCCcEEEEEEchhhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCChhhcCccccCC---CC----CCCc----c
Confidence 45689999999999999977789999999999999999999999999999998888742211 11 1111 2
Q ss_pred hHHHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCC
Q 005131 88 DGKACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSS 167 (713)
Q Consensus 88 ~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~ 167 (713)
.+++++++||..++..+...|.+.|+++.++++|.+|+.+...+.++.+.++.+|+.|+|||+++||.+... +
T Consensus 71 ~~qalaavGq~~l~~~~~~~f~~~g~~~aqvLlT~~d~~~~~~y~n~~~~l~~LL~~g~IPIinenD~v~~~-------e 143 (368)
T PRK13402 71 EKQAMAAAGQGLLMATWSKLFLSHGFPAAQLLLTHGDLRDRERYINIRNTINVLLERGILPIINENDAVTTD-------R 143 (368)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEEEecchhhhHHHHHHHHHHHHHHHHCCcEEEEeCCCcEeec-------c
Confidence 357999999999999999999999999999999999987777777778999999999999999998888663 2
Q ss_pred CcccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeec--cccchhhhcCCCCccccCchHHHHHHHH
Q 005131 168 GIFWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVK--ERHQGEITFGDKSRVGRGGMTAKVKAAV 244 (713)
Q Consensus 168 g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~--~e~~~~~~~~~~~~~~~g~m~~Kl~aa~ 244 (713)
-.+++||++|+++|.+|+||.|+|+|||||||++|| .+|++++|++|++ +|+..+ ..+..+.+++|||++|++++.
T Consensus 144 l~~GdnD~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~~~l-~~~~~s~~gtGGM~~Kl~Aa~ 222 (368)
T PRK13402 144 LKVGDNDNLSAMVAALADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEIYAM-AGGAGSNVGTGGMRTKIQAAK 222 (368)
T ss_pred cccCChHHHHHHHHHHhCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHHHHH-hcccccCcCcCCchHHHHHHH
Confidence 346889999999999999999999999999999999 8999999999986 444443 333345688999999999999
Q ss_pred HHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEecC
Q 005131 245 NAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQD 280 (713)
Q Consensus 245 ~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~ 280 (713)
.+.++|++++|+++..|+.+.+++.|+..||++.+.
T Consensus 223 ~a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 258 (368)
T PRK13402 223 IAMSHGIETFIGNGFTADIFNQLLKGQNPGTYFTPE 258 (368)
T ss_pred HHHHcCCcEEEEcCCCchHHHHHhcCCCCceEEecC
Confidence 999999999999999999999999999999999874
No 139
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=100.00 E-value=1.2e-36 Score=312.66 Aligned_cols=248 Identities=50% Similarity=0.724 Sum_probs=212.6
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHH
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKAC 92 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 92 (713)
++|||||||+++++++.++.+.+.+++++|+++++.|+++||||||+.++|+..+.. .. .+..+ ...+++
T Consensus 1 ~iViK~GGs~i~~~~~~~~~~~i~~~~~~i~~~~~~~~~viiV~sg~~~~g~~~~~~---~~-~~~~~------~~~~~~ 70 (251)
T cd04242 1 RIVVKVGSSLLTDEDGGLDLGRLASLVEQIAELRNQGKEVILVSSGAVAAGRQRLGL---EK-RPKTL------PEKQAL 70 (251)
T ss_pred CEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecCchhhChhhhcc---Cc-CCCch------hHHHHH
Confidence 589999999999988777888999999999999999999999999988888753221 11 11011 123688
Q ss_pred HHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcccc
Q 005131 93 AAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIFWD 172 (713)
Q Consensus 93 ~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~~~ 172 (713)
.++||..+..++...|.+.|+++.++++++.++.......+..+.|+.+|+.|+|||++++|.+.+.. -.++|
T Consensus 71 ~~~Gq~~l~~~~~~~l~~~Gi~~~q~l~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~~~d~v~~~~-------~~~~~ 143 (251)
T cd04242 71 AAVGQSLLMALYEQLFAQYGIKVAQILLTRDDFEDRKRYLNARNTLETLLELGVIPIINENDTVATEE-------IRFGD 143 (251)
T ss_pred HHHhHHHHHHHHHHHHHHcCCeEEEEEEehhHhcchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeeec-------cccCC
Confidence 99999999999999999999999999999999887766666678999999999999999888887732 12478
Q ss_pred hhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeee--ccccchhhhcCCCCccccCchHHHHHHHHHHHHc
Q 005131 173 NDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYV--KERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYA 249 (713)
Q Consensus 173 sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is--~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~ 249 (713)
+|++|+.+|.+|+||+|+|+|||||||++|| .+|++++|++|+ ++|+.+++. +....+++|+|++|++++..+.++
T Consensus 144 ~D~~A~~lA~~l~Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e~~~~~~-~~~~~~~tggm~~Kl~a~~~a~~~ 222 (251)
T cd04242 144 NDRLSALVAGLVNADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDEIEAMAG-GSGSSVGTGGMRTKLKAARIATEA 222 (251)
T ss_pred hHHHHHHHHHHcCCCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHHHHHHhc-ccCcCcccCCcHHHHHHHHHHHHC
Confidence 9999999999999999999999999999999 789999999999 888877541 223458999999999999999999
Q ss_pred CCcEEEEeCCCchhHHHHhcCCcceeEEe
Q 005131 250 GIPVVITSGYSDENILKVLQGERIGTLFH 278 (713)
Q Consensus 250 gv~v~I~~g~~~~~l~~~~tge~iGT~i~ 278 (713)
|++++|++++.|+++.+++.|+..||++.
T Consensus 223 gi~v~I~~g~~~~~i~~~l~g~~~GT~i~ 251 (251)
T cd04242 223 GIPVVIANGRKPDVLLDILAGEAVGTLFL 251 (251)
T ss_pred CCcEEEEcCCCCCHHHHHHcCCCCCeEeC
Confidence 99999999999999999999999999873
No 140
>PRK05429 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=2.6e-36 Score=325.33 Aligned_cols=259 Identities=44% Similarity=0.655 Sum_probs=217.8
Q ss_pred hhhhhhccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCc
Q 005131 4 SRAFVKDVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKP 83 (713)
Q Consensus 4 ~~~~~~~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~ 83 (713)
+|..|+.|+++|||||||+|++++++++.+.+.+++++|+.+++.|+++||||||+-..+...+.. .. .+..+
T Consensus 1 ~~~~~~~~~~iVIKiGGs~l~~~~~~l~~~~i~~la~~I~~l~~~g~~vViV~sGai~~g~~~l~l---~~-~~~~~--- 73 (372)
T PRK05429 1 MRQALSDARRIVVKVGSSLLTGGGGGLDRARIAELARQIAALRAAGHEVVLVSSGAVAAGRERLGL---PE-RPKTL--- 73 (372)
T ss_pred CccchhhCCEEEEEeChhhccCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEcccHhhhhHhhcCC---CC-CCCch---
Confidence 456677889999999999999987789999999999999999999999999999864443322111 11 11111
Q ss_pred cccchHHHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcc
Q 005131 84 QIELDGKACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPY 163 (713)
Q Consensus 84 ~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~ 163 (713)
-..+++.++||..+...+...|.+.|+++.+++++..++.....+.+..+.|+.+++.|.|||++++|.+....
T Consensus 74 ---~~~qa~aavGq~~L~~~~~~~l~~~gi~~~qil~t~~d~~~~~~~ln~~~~i~~Ll~~g~IPVi~~nd~v~~~~--- 147 (372)
T PRK05429 74 ---AEKQAAAAVGQSRLMQAYEELFARYGITVAQILLTRDDLEDRERYLNARNTLRTLLELGVVPIINENDTVATDE--- 147 (372)
T ss_pred ---HHHHHHHHHhHHHHHHHHHHHHHHCCCCEEEEEeehhHhhhhhHhhhHHHHHHHHHHCCCEEEEcCCCccceec---
Confidence 12468889999999999999999999999999999998876666656678999999999999999888887643
Q ss_pred cCCCCcccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeec--cccchhhhcCCCCccccCchHHHH
Q 005131 164 EDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVK--ERHQGEITFGDKSRVGRGGMTAKV 240 (713)
Q Consensus 164 ~~~~g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~--~e~~~~~~~~~~~~~~~g~m~~Kl 240 (713)
-.++|+|++|++||.+|+||+|+|+|||||||++|| .+|++++|++|++ +|+.+++.. ..+.+++|||++|+
T Consensus 148 ----l~~gd~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~a~~I~~i~~~~~e~~~~~~~-~~~~~gtGGM~~Kl 222 (372)
T PRK05429 148 ----IKFGDNDTLSALVANLVEADLLILLTDVDGLYTADPRKNPDAKLIPEVEEITDELEAMAGG-AGSGLGTGGMATKL 222 (372)
T ss_pred ----ccccChHHHHHHHHHHcCCCEEEEecCCCeeEcCCCCCCCCceEEEEeccCCHHHHHHhcC-CCCCcCcCCcHHHH
Confidence 124889999999999999999999999999999999 7899999999987 456665432 22458999999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEecC
Q 005131 241 KAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQD 280 (713)
Q Consensus 241 ~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~ 280 (713)
+++..+.++|++++|+|++.|+.+.+++.|+..||.+.+.
T Consensus 223 ~aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 262 (372)
T PRK05429 223 EAARIATRAGIPVVIASGREPDVLLRLLAGEAVGTLFLPQ 262 (372)
T ss_pred HHHHHHHHCCCeEEEEcCCCccHHHHHhcCCCCCEEEeeC
Confidence 9999999999999999999999999999999999999874
No 141
>TIGR01027 proB glutamate 5-kinase. Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family.
Probab=100.00 E-value=1.8e-35 Score=317.46 Aligned_cols=252 Identities=43% Similarity=0.640 Sum_probs=214.3
Q ss_pred ceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHH
Q 005131 12 KRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKA 91 (713)
Q Consensus 12 ~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 91 (713)
+++|||||||+|+++++.++.+.++.++++|+.+++.|+++||||||+...+...+.. ......+ ..+++
T Consensus 1 ~riVIKiGgs~l~~~~~~~~~~~i~~la~~I~~l~~~g~~vvlV~sG~~~~g~~~lg~----~~~~~~l------~~~qa 70 (363)
T TIGR01027 1 QRIVVKVGSSSLTGSSGSLDRSHIAELVEQVAALHAAGHEVVIVSSGAIAAGFEALGL----PERPKTL------AEKQA 70 (363)
T ss_pred CeEEEEeccceEeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCcHHhcCccccCC----CCCccch------HHHHH
Confidence 4799999999999987679999999999999999999999999999986655543221 1011111 22468
Q ss_pred HHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCccc
Q 005131 92 CAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIFW 171 (713)
Q Consensus 92 ~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~~ 171 (713)
++++||..+..++...|.+.|+++.++++|.+++.+...+.+..++++.+|++|.|||++++|.+.... ..++
T Consensus 71 ~aa~Gq~~l~~~~~~~l~~~Gi~~aqillt~~d~~~~~~~lna~~~i~~Ll~~g~iPVi~end~v~~~~-------l~~g 143 (363)
T TIGR01027 71 LAAVGQVRLMQLYEQLFSQYGIKVAQILLTRADFSDRERYLNARNTLEALLELGVVPIINENDTVATEE-------IKFG 143 (363)
T ss_pred HHHhChHHHHHHHHHHHHHcCCeEEEEEEeccchhhHHHHHHHHHHHHHHHhCCCEEEEeCCCceeeee-------cCcC
Confidence 999999999999999999999999999999999988777777789999999999999999888886632 2357
Q ss_pred chhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccc-cchhhhcCCCCccccCchHHHHHHHHHHHHc
Q 005131 172 DNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKER-HQGEITFGDKSRVGRGGMTAKVKAAVNAAYA 249 (713)
Q Consensus 172 ~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e-~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~ 249 (713)
|+|++|+++|.+|+||.|+|+|||||||++|| .+|+|++|++|++.+ ....+..+....+++|||++|++++..+.++
T Consensus 144 d~D~lAa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i~~~~~~~~gtGGM~~Kl~Aa~~a~~~ 223 (363)
T TIGR01027 144 DNDTLSALVAILVGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGVAGDSGSSVGTGGMRTKLQAADLATRA 223 (363)
T ss_pred ChHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHhhcCCCcCcCcCCchHHHHHHHHHHHC
Confidence 89999999999999999999999999999999 899999999998643 3333443333458999999999999999999
Q ss_pred CCcEEEEeCCCchhHHHHhcCCcceeEEecC
Q 005131 250 GIPVVITSGYSDENILKVLQGERIGTLFHQD 280 (713)
Q Consensus 250 gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~ 280 (713)
|++++|++++.|+.+.+++.|+..||++.+.
T Consensus 224 gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 254 (363)
T TIGR01027 224 GVPVIIASGSKPEKIADALEGAPVGTLFHAQ 254 (363)
T ss_pred CCeEEEEeCCCccHHHHHhcCCCCcEEEeeC
Confidence 9999999999999999999999999999874
No 142
>PTZ00489 glutamate 5-kinase; Provisional
Probab=100.00 E-value=2.8e-35 Score=300.97 Aligned_cols=254 Identities=35% Similarity=0.532 Sum_probs=213.6
Q ss_pred hhhhhhccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCc
Q 005131 4 SRAFVKDVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKP 83 (713)
Q Consensus 4 ~~~~~~~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~ 83 (713)
||..+++++++|||+|||+|++++ .++...+..++++++.+++ ++++||||||+.+.|...+... .
T Consensus 1 ~~~~~~~~~riVIKlG~Svit~~~-~~~~~~~~~l~~~i~~l~~-~~~vilVssGava~g~~~~~~~-----------~- 66 (264)
T PTZ00489 1 MADILKSVKRIVVKVGSSILVDNQ-EIAAHRIEALCRFIADLQT-KYEVILVTSGAVAAGYTKKEMD-----------K- 66 (264)
T ss_pred ChhhhhcCCEEEEEeccceeeCCC-CcCHHHHHHHHHHHHHHhc-CCeEEEEecChHhcChhhcCCC-----------c-
Confidence 567777899999999999999764 6777889999999999976 7999999999877675422110 0
Q ss_pred cccchHHHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcc
Q 005131 84 QIELDGKACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPY 163 (713)
Q Consensus 84 ~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~ 163 (713)
.....++++.++||..++.++...|.+.|+.++|++++..++.....+.+..+.++.+|+.|.|||++++|.+...
T Consensus 67 ~~~~~~qa~aaiGq~~L~~~y~~~f~~~~~~~aqiLlt~~d~~~~~~~~n~~~~l~~lL~~g~VPIinend~~~~~---- 142 (264)
T PTZ00489 67 SYVPNKQALASMGQPLLMHMYYTELQKHGILCAQMLLAAYDLDSRKRTINAHNTIEVLISHKVIPIINENDATALH---- 142 (264)
T ss_pred cccHHHHHHHHhCHHHHHHHHHHHHHhCCCeEEEeeeeccccccchhhHHHHHHHHHHHHCCCEEEECCCCCcccc----
Confidence 1123468999999999999999999999999999999999998877777888999999999999999998877663
Q ss_pred cCCCCcccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcc---eeeeeccccchhhhcCCCCccccCchHHH
Q 005131 164 EDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKL---IDTYVKERHQGEITFGDKSRVGRGGMTAK 239 (713)
Q Consensus 164 ~~~~g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~---i~~is~~e~~~~~~~~~~~~~~~g~m~~K 239 (713)
+-.++|||++|+.+|..++||+|+|+|||||||++|| .+|+|++ |++++.++... . .+....+++|||.+|
T Consensus 143 ---e~~~gdnD~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~~A~~~~~i~~i~~~~~~~-~-~~~~~~~~tGGM~~K 217 (264)
T PTZ00489 143 ---ELVFGDNDRLSALVAHHFKADLLVILSDIDGYYTENPRTSTDAKIRSVVHELSPDDLVA-E-ATPNNRFATGGIVTK 217 (264)
T ss_pred ---eeEeCChHHHHHHHHHHhCCCEEEEeeccCeeEcCCCCCCCccceeeeeccCCHHHHHH-h-cCcCCCcccCChHHH
Confidence 2234799999999999999999999999999999999 7889998 66677655532 1 223346899999999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCchhHHHHhcCC--cceeEEecC
Q 005131 240 VKAAVNAAYAGIPVVITSGYSDENILKVLQGE--RIGTLFHQD 280 (713)
Q Consensus 240 l~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge--~iGT~i~~~ 280 (713)
++++..+.++|++++|++++.|+.+.+++.|+ ..||++.+.
T Consensus 218 l~aa~~a~~~Gi~v~I~~g~~~~~i~~~l~g~~~~~GT~~~~~ 260 (264)
T PTZ00489 218 LQAAQFLLERGGKMYLSSGFHLEKARDFLIGGSHEIGTLFYPR 260 (264)
T ss_pred HHHHHHHHHCCCCEEEEeCCCchHHHHHHcCCCCCCceEEeec
Confidence 99999999999999999999999999999875 479999764
No 143
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-32 Score=273.48 Aligned_cols=245 Identities=26% Similarity=0.305 Sum_probs=195.1
Q ss_pred ccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchH
Q 005131 10 DVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDG 89 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 89 (713)
+++++|||+||+++.+++ .++.++++|+.++..|.++|||||||+++++.+ +..+.......++|.++.+-..
T Consensus 1 ~~k~~VIK~GG~~~~~~~------l~~~~~~di~lL~~~G~~~VvVHGggp~I~~~l-~~~gie~~f~~glRvTd~~tle 73 (265)
T COG0548 1 RGKTIVIKLGGSAMEDEN------LLEAFASDIALLKSVGIRPVVVHGGGPQIDEML-AKLGIEPEFVKGLRVTDAETLE 73 (265)
T ss_pred CCceEEEEECceeecCch------HHHHHHHHHHHHHHCCCcEEEEeCCchHHHHHH-HHcCCCCeeeCCEEcCCHHHHH
Confidence 468999999999999976 689999999999999999999999999999985 4344444345567777643222
Q ss_pred HHH-HHcchHHHHHHHHHHhhhcCCcccee-------eec----c---cccCchhHHHHHH-HHHHHHHhCCceeEEcCC
Q 005131 90 KAC-AAVGQNSIMALYDTLFSELDLTSAQL-------LVT----D---NDFRDKEFRSQLS-ETVKSLLSLRVIPVFNEN 153 (713)
Q Consensus 90 ~~~-~~~g~~~~~~l~~~~l~~~gi~~~~~-------~~~----~---~~~~~~~~~~~~~-~~i~~~l~~g~vpV~~g~ 153 (713)
.+. ...|+.... +...|.+.|..+..+ +.. . -|++++|..+.++ +.|+.+++.|+|||++|
T Consensus 74 vv~mvl~G~vNk~--iva~l~~~g~~avGlsg~Dg~li~A~~~~~~~~id~g~vG~i~~Vn~~~i~~ll~~~~IpViap- 150 (265)
T COG0548 74 VVEMVLGGTVNKE--IVARLSKHGGQAVGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPVIAP- 150 (265)
T ss_pred HHHHHHHHHHHHH--HHHHHHHhCCcceeeeecCCCEEEEEEcccccccccceeeeEEEECHHHHHHHHhCCCceEEec-
Confidence 222 222244333 444566666644322 211 1 2488888888887 89999999999999998
Q ss_pred CceecCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccc
Q 005131 154 DAVSTRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVG 232 (713)
Q Consensus 154 d~v~~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~ 232 (713)
.+.+.++..| +|+|++|+.+|.+|+|++|+++|||+|||+++| ++ ++|++++.+|++++++++ .+
T Consensus 151 -------ia~~~~G~~~NvnaD~~A~~iA~aLkAekLi~ltdv~Gvl~~~~-~~--s~i~~~~~~~~~~li~~~----~i 216 (265)
T COG0548 151 -------IAVDEDGETLNVNADTAAGALAAALKAEKLILLTDVPGVLDDKG-DP--SLISELDAEEAEELIEQG----II 216 (265)
T ss_pred -------ceECCCCcEEeeCHHHHHHHHHHHcCCCeEEEEeCCcccccCCC-Cc--eeeccCCHHHHHHHHhcC----Cc
Confidence 3334466666 999999999999999999999999999999864 22 799999999999999877 78
Q ss_pred cCchHHHHHHHHHHHHcCCc-EEEEeCCCchhH-HHHhcCCcceeEEe
Q 005131 233 RGGMTAKVKAAVNAAYAGIP-VVITSGYSDENI-LKVLQGERIGTLFH 278 (713)
Q Consensus 233 ~g~m~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~tge~iGT~i~ 278 (713)
++||+||+++|..|++.|++ ++|.|++.|+.+ .++|+++.+||.+.
T Consensus 217 ~~GMi~Kv~~a~~A~~~Gv~~v~ii~g~~~~~ll~eLFt~~giGT~i~ 264 (265)
T COG0548 217 TGGMIPKVEAALEALESGVRRVHIISGRVPHSLLLELFTRDGIGTMIV 264 (265)
T ss_pred cCccHHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHhcCCCcceEec
Confidence 99999999999999999997 999999999996 58999999999875
No 144
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=99.97 E-value=2e-30 Score=285.83 Aligned_cols=319 Identities=14% Similarity=0.077 Sum_probs=232.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHH---HhhHHHHHHHhcCchhhHhHhhcCHHHHHHHHH
Q 005131 292 AREMAVAARESSRRLQAMSSEDRKKILLDIADALEANEELIIEE---NEADVAAAEQEGYEKPLLSRLALKSGKISSLAN 368 (713)
Q Consensus 292 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~ev~~~~~ 368 (713)
+++.++..+++++.|..-+...|...++++...+..+.+.+..+ ...++.+...+ ..++
T Consensus 26 ~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l~------------------~~l~ 87 (422)
T cd07080 26 VEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENLE------------------RILE 87 (422)
T ss_pred HHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHHH------------------HHHH
Confidence 67788888888999998888999999999998888887777755 44444433321 1111
Q ss_pred HHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 005131 369 SVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALVQIAALAIRSGNGLLLKGGKEAKRSNAILHK 447 (713)
Q Consensus 369 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~ 447 (713)
. .+. ......++.+ .+...+++++|+|||++|+|| ||+...+.+++||++||++|+|||+.+|.++..+.+
T Consensus 88 ~--el~-~~~~Ld~w~~-----~~~~~~~~~~P~Gvv~~I~p~N~P~l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~ 159 (422)
T cd07080 88 R--ELG-SPGILDEWVP-----PGRGGYIRAQPRGLVVHIIAGNVPLLPVWSIVRGLLVKNVNLLKMSSSDPLTATALLR 159 (422)
T ss_pred H--hcC-CcccccCCcc-----CCCCCeeEEcCCceEEEEccCCccccHHHHHHHHHHhcCceEEECCCccchHHHHHHH
Confidence 1 011 0111111211 133457789999999999999 999546999999999999999999999999999999
Q ss_pred HHHHhccccCCCCeEEEec--CC-chhHHhhhcCCCccEEEecCCHHHHHHHHHhcC-CCeEEecCcc-ceEEEcCCC--
Q 005131 448 IITEVIPENVGERLIGLVT--SR-EEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTK-IPVLGHADGI-CHIYVDKSA-- 520 (713)
Q Consensus 448 ~~~~al~~glP~g~v~vv~--g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~-~~v~lElgG~-~p~iV~~dA-- 520 (713)
+|.+++|+.-=.+.++++. |+ +++++.|..++ |+|+||||+++++.|++.+. .+.++|+||| +++|+.++|
T Consensus 160 ~l~~~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~~~~Le~Ggk~s~~vi~~~a~~ 237 (422)
T cd07080 160 SLADVDPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPGCRLIDFGPKYSFAVIDREALE 237 (422)
T ss_pred HHHhcCCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCCCeeeecCCceeEEEecHHhhc
Confidence 9999844310015888884 54 45778777766 99999999999999998763 5679999999 555556668
Q ss_pred --CHHHH-HHHHHHccCCCCCccccCceEEEcCCC---chhHHHHHHHHHHhCCCEEEcCC-------------------
Q 005131 521 --DMDMA-KQIVLDAKVDYPAACNAMETLLIHQDL---VPTGFNELIDNLRSEGVTLYGGP------------------- 575 (713)
Q Consensus 521 --Dl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i---~d~fi~~l~~~~~~~Ga~l~gg~------------------- 575 (713)
|++.+ ..++++.++++||.|+|++++|||+++ +++|.++|.+.+.+...+.-.+.
T Consensus 238 ~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~~~~~~~~~~~~~~r~~~~~~ 317 (422)
T cd07080 238 SEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPALSLSAAESAKIARARLEAEFY 317 (422)
T ss_pred cccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999 567888899999999999999999999 89999999765543322221110
Q ss_pred -------cc-ccccCC-CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCee
Q 005131 576 -------RA-SSLLNI-PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSA 642 (713)
Q Consensus 576 -------~~-~~~~~v-~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G 642 (713)
.. .+.+-+ ++... ..-.++=.+.|.++++++|++..++. |=.|.++|..+.+. .++++++..-
T Consensus 318 ~~~~~~~~~~~~~v~~~~~~~~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~~ 389 (422)
T cd07080 318 ELKGGVSRDLGWTVIISDEIGL-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAAA 389 (422)
T ss_pred HHhcCCCCCCCeEEEEeCCCCc-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHHc
Confidence 00 000111 22222 22445567889999999999999985 77899999999887 6777776533
No 145
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.97 E-value=5.4e-31 Score=271.71 Aligned_cols=242 Identities=26% Similarity=0.386 Sum_probs=180.7
Q ss_pred eEEEEeCccceecCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 13 RIVVKVGTAVVTRSDG--RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~--~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
++|||+|||+|+++++ +++.+.+++++++|+.++ |.++||||||++. ++..++.++... ..+..+...+....
T Consensus 1 ~iVIKiGGs~l~~~~~~~~~~~~~l~~l~~~l~~l~--g~~vvlVhGgg~~-~~~~~~~~g~~~-g~~~~~~~~l~~~~- 75 (252)
T cd04241 1 MIILKLGGSVITDKDRPETIREENLERIARELAEAI--DEKLVLVHGGGSF-GHPKAKEYGLPD-GDGSFSAEGVAETH- 75 (252)
T ss_pred CEEEEEeceEEEcCCCCCccCHHHHHHHHHHHHhcc--CCCEEEEECCCcc-cCHHHHHhCCCc-CCCchhhhhHHHHH-
Confidence 4899999999998753 788899999999999876 9999999987654 554455444322 11111111111111
Q ss_pred HHHHcchHHHHHHHHHHhhhcCCccc-----eeeecccccCchhHHHHH-HHHHHHHHhCCceeEEcCCCceecCCCccc
Q 005131 91 ACAAVGQNSIMALYDTLFSELDLTSA-----QLLVTDNDFRDKEFRSQL-SETVKSLLSLRVIPVFNENDAVSTRKAPYE 164 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~~~~~~~~~~~~~~~~~-~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~ 164 (713)
..+ ..+...+.+.|.+.|+++. +++.+. .+....+ .+.++.+|+.|+|||++| |.+...
T Consensus 76 --~~~--~~ln~~~~~~l~~~g~~a~~l~~~~~~~~~-----~g~~~~~~~~~l~~ll~~g~iPVi~~-~~~~~~----- 140 (252)
T cd04241 76 --EAM--LELNSIVVDALLEAGVPAVSVPPSSFFVTE-----NGRIVSFDLEVIKELLDRGFVPVLHG-DVVLDE----- 140 (252)
T ss_pred --HHH--HHHHHHHHHHHHHCCCCeEEEChHHeEEec-----CCeeeeecHHHHHHHHhCCCEEEEcC-CeEecC-----
Confidence 111 2334456777888888765 333322 1222222 488999999999999995 544332
Q ss_pred CCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhc-CCCCccccCchHHHHHH
Q 005131 165 DSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITF-GDKSRVGRGGMTAKVKA 242 (713)
Q Consensus 165 ~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~-~~~~~~~~g~m~~Kl~a 242 (713)
.++.+ +|+|++|+.+|.+|+|++|+|+|||||||++|| |++++|++|+++++++++.. +....+++|||.+|+++
T Consensus 141 -~~~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~P--~~~~~i~~i~~~~~~~~~~~~~~~~~~~tGGm~~Kl~a 217 (252)
T cd04241 141 -GGGITILSGDDIVVELAKALKPERVIFLTDVDGVYDKPP--PDAKLIPEIDVGSLEDILAALGSAGTDVTGGMAGKIEE 217 (252)
T ss_pred -CCCeEEeChHHHHHHHHHHcCCCEEEEEeCCCeeECCCC--CCCeEcceeCccchHHHHHhcCcCCccccCCHHHHHHH
Confidence 22233 899999999999999999999999999999999 88999999999888887652 12234789999999999
Q ss_pred HHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 243 AVNAAYAGIPVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 243 a~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
+..++++|++++|+++..|+++.++++|+..||.+
T Consensus 218 a~~a~~~Gv~v~I~~g~~~~~l~~~l~g~~~GT~i 252 (252)
T cd04241 218 LLELARRGIEVYIFNGDKPENLYRALLGNFIGTRI 252 (252)
T ss_pred HHHHHhcCCeEEEEeCCCHHHHHHHHcCCCCceEC
Confidence 99999999999999999999999999999999974
No 146
>PRK12353 putative amino acid kinase; Reviewed
Probab=99.97 E-value=1.2e-30 Score=274.17 Aligned_cols=251 Identities=24% Similarity=0.320 Sum_probs=189.9
Q ss_pred ccceEEEEeCccceecCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccc
Q 005131 10 DVKRIVVKVGTAVVTRSDG--RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIEL 87 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~--~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 87 (713)
||+++||||||++|+++++ ++|.+.++.++++|+.+++.|+++||||||++++|+..+...... .+.. +.+...+
T Consensus 1 ~~~~iVIklGG~~L~~~~~~~~~~~~~i~~la~~Ia~l~~~G~~vvlV~Gg~~~~G~~~~~~~~~~--~~~~-~~~~~~~ 77 (314)
T PRK12353 1 MMKKIVVALGGNALGSTPEEATAQLEAVKKTAKSLVDLIEEGHEVVITHGNGPQVGNILLAQEAAA--SEKN-KVPAMPL 77 (314)
T ss_pred CCcEEEEEECHHHhCCCCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEeCCchHhCHHHhcCcccc--ccCC-CCCCchh
Confidence 5899999999999999874 599999999999999999999999999999999999865532211 1111 2222222
Q ss_pred hHHHHHHcchH----HHHHHHHHHhhhcCC------ccceeeecccccC--ch---------------------------
Q 005131 88 DGKACAAVGQN----SIMALYDTLFSELDL------TSAQLLVTDNDFR--DK--------------------------- 128 (713)
Q Consensus 88 ~~~~~~~~g~~----~~~~l~~~~l~~~gi------~~~~~~~~~~~~~--~~--------------------------- 128 (713)
+.+.+.++. .+...+...|...|+ ...+.+++.+|+. ..
T Consensus 78 --~~~~a~~qg~l~~~l~~~~~~~l~~~~~~~~~~~~v~q~ll~~~d~~f~~~~~p~g~~~~~~~~~~~~~~~g~~~~~~ 155 (314)
T PRK12353 78 --DVCGAMSQGYIGYHLQNALRNELLKRGIDKPVATVVTQVVVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGYTFKED 155 (314)
T ss_pred --HHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccceEEEEEEEcCCcccccCCCccccccccHHHHHHhhhhcCceeeec
Confidence 333444444 233567778888888 3456666766533 11
Q ss_pred -h-HHHH----------H-HHHHHHHHhCCceeEEcCCCceecCCCcccCCCC------cccchhHHHHHHHhhhCCCEE
Q 005131 129 -E-FRSQ----------L-SETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSG------IFWDNDSLAALLALELKADLL 189 (713)
Q Consensus 129 -~-~~~~----------~-~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g------~~~~sD~~A~~lA~~l~Ad~l 189 (713)
+ .+++ + .+.++.+|+.|.|||++|+. +.|.....+ .++|+|++|+.+|.+|+||+|
T Consensus 156 ~~~~~r~~v~sp~p~~~v~~~~i~~lL~~g~IpV~~g~g-----g~Pi~~~~~~~~~~~~~~d~D~lAa~lA~~l~Ad~L 230 (314)
T PRK12353 156 AGRGYRRVVPSPKPVDIVEIEAIKTLVDAGQVVIAAGGG-----GIPVIREGGGLKGVEAVIDKDFASAKLAELVDADLL 230 (314)
T ss_pred CCceeEeccCCCCccccccHHHHHHHHHCCCEEEEcCCC-----CCCEEEeCCceeeeeEecCHHHHHHHHHHHhCCCEE
Confidence 1 1223 2 49999999999999999732 222211111 138999999999999999999
Q ss_pred EEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHH--HcCCcEEEEeCCCchhHHHH
Q 005131 190 ILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAA--YAGIPVVITSGYSDENILKV 267 (713)
Q Consensus 190 i~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~--~~gv~v~I~~g~~~~~l~~~ 267 (713)
+|+|||||||++|| +|++++|++|+++|+++++..+ .+++|+|.+|+++|..++ +.|++++|++ ++.+.++
T Consensus 231 i~lTdvdGVy~~~~-~~~a~~i~~i~~~e~~~~~~~~---~~~tGGM~~Kl~aA~~a~~~~~g~~v~I~~---~~~i~~~ 303 (314)
T PRK12353 231 IILTAVDKVYINFG-KPNQKKLDEVTVSEAEKYIEEG---QFAPGSMLPKVEAAISFVESRPGRKAIITS---LEKAKEA 303 (314)
T ss_pred EEEeCCccccCCCC-CCCCeECcCcCHHHHHHHHhcC---CcCCCCcHHHHHHHHHHHHHcCCCEEEECC---chHHHHH
Confidence 99999999999765 5889999999998888877543 377899999999999988 6788999998 8888899
Q ss_pred hcCCcceeEEe
Q 005131 268 LQGERIGTLFH 278 (713)
Q Consensus 268 ~tge~iGT~i~ 278 (713)
+.|+ .||.+.
T Consensus 304 l~g~-~GT~i~ 313 (314)
T PRK12353 304 LEGK-AGTVIV 313 (314)
T ss_pred hCCC-CCeEec
Confidence 9998 799885
No 147
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=99.97 E-value=4.4e-30 Score=248.25 Aligned_cols=244 Identities=25% Similarity=0.359 Sum_probs=179.4
Q ss_pred EEEEeCccceecCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccC-ccccchHH
Q 005131 14 IVVKVGTAVVTRSDG--RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQK-PQIELDGK 90 (713)
Q Consensus 14 iViKlGGs~l~~~~~--~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 90 (713)
+|+|||||+|++++. +++.+.+++++.+|+. ..-.++|||||| +++||+..+.++. + ...+.+. ........
T Consensus 3 ~IlKlGGSvITdK~~p~t~r~~~l~ria~eI~~--~~~~~livVHGg-GSFGHp~Ak~~~~-~-~~~~~~s~~G~~~~~~ 77 (252)
T COG1608 3 IILKLGGSVITDKDKPRTVREDRLRRIAREISN--GKPEKLIVVHGG-GSFGHPAAKEFGL-E-GLKNYLSPLGFSLTHL 77 (252)
T ss_pred EEEEecceeeecCCCcchhhHHHHHHHHHHHhc--CCcccEEEEecC-ccccCHHHHHhCc-c-ccccccCccchHHHHH
Confidence 899999999999976 7888999999999985 222477888776 5999998887766 2 2222111 11112222
Q ss_pred HHHHcchHHHHHHHHHHhhhcCCccce-eeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCc
Q 005131 91 ACAAVGQNSIMALYDTLFSELDLTSAQ-LLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGI 169 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~gi~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~ 169 (713)
++..+... ..+.|.+.|+.+-. ...+-. ..+........+.++.+|++|+|||++ ||+|...+.++.+.+|
T Consensus 78 am~~L~~~-----V~~~l~~~Gv~av~~~P~s~~-~~~gr~~~~~l~~i~~~l~~gfvPvl~-GDVv~d~~~g~~IiSG- 149 (252)
T COG1608 78 AMLELNSI-----VVDALLDAGVRAVSVVPISFS-TFNGRILYTYLEAIKDALEKGFVPVLY-GDVVPDDDNGYEIISG- 149 (252)
T ss_pred HHHHHHHH-----HHHHHHhcCCccccccCccee-ecCCceeechHHHHHHHHHcCCEeeee-cceEEcCCCceEEEec-
Confidence 33333333 34446666665521 111100 111111112247799999999999999 6999998766666555
Q ss_pred ccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHH
Q 005131 170 FWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAY 248 (713)
Q Consensus 170 ~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~ 248 (713)
|.++..||++|++|+++|+|||||||+.|| ..|+++.+.++....+. .+....++||||..|++++....+
T Consensus 150 ----DdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~~----~gs~~~DVTGGi~~Kl~~~~~~~~ 221 (252)
T COG1608 150 ----DDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVAL----GGSGGTDVTGGIAKKLEALLEIAR 221 (252)
T ss_pred ----cHHHHHHHHHhCCCEEEEEecCCceecCCCCcCccccchhhhhhhhhh----cCcCcccchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 78999888876543111 122346999999999999999999
Q ss_pred cCCcEEEEeCCCchhHHHHhcCCcceeEEe
Q 005131 249 AGIPVVITSGYSDENILKVLQGERIGTLFH 278 (713)
Q Consensus 249 ~gv~v~I~~g~~~~~l~~~~tge~iGT~i~ 278 (713)
.+.+++|+|+..|++++.++.|+.+||.+.
T Consensus 222 ~~~~vyi~ng~~~~ni~~~l~G~~vGT~I~ 251 (252)
T COG1608 222 YGKEVYIFNGNKPENIYRALRGENVGTRID 251 (252)
T ss_pred cCceEEEECCCCHHHHHHHhcCCCCceEec
Confidence 999999999999999999999999999874
No 148
>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;). AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd
Probab=99.97 E-value=3.5e-30 Score=260.80 Aligned_cols=208 Identities=23% Similarity=0.307 Sum_probs=172.9
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHH
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKAC 92 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 92 (713)
++|+|||||++.+++ .+++++++|+.+ +.|+++||||||++.+++.+++.. .+
T Consensus 1 ~iViK~GGs~l~~~~------~~~~~~~~i~~l-~~g~~vvvV~Sg~~~~t~~l~~~~--------------------~~ 53 (227)
T cd04234 1 MVVQKFGGTSVASAE------RIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIELA--------------------LL 53 (227)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHHHh-hcCCCEEEEEcCCCcccHHHHHHH--------------------HH
Confidence 479999999998854 789999999999 889999999999999999875532 66
Q ss_pred HHcchHHHHHHHHHHhhhcCCccc-----eeeecccccCchhHHHH-HHHHHHHHHhC-CceeEEcCCCceecCCCcccC
Q 005131 93 AAVGQNSIMALYDTLFSELDLTSA-----QLLVTDNDFRDKEFRSQ-LSETVKSLLSL-RVIPVFNENDAVSTRKAPYED 165 (713)
Q Consensus 93 ~~~g~~~~~~l~~~~l~~~gi~~~-----~~~~~~~~~~~~~~~~~-~~~~i~~~l~~-g~vpV~~g~d~v~~~~~~~~~ 165 (713)
.++|+..+..++...|++.|+++. +..++..++...+.... ..+.++.+++. |.|||++|+-+.. .
T Consensus 54 ~s~Ge~~~~~l~~~~l~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vpVv~g~i~~~--~----- 126 (227)
T cd04234 54 LSFGERLSARLLAAALRDRGIKARSLDARQAGITTDDNHGAARIIEISYERLKELLAEIGKVPVVTGFIGRN--E----- 126 (227)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEeCHHHCCEEcCCccchhhHHHHHHHHHHHHHhhCCCEEEecCceecC--C-----
Confidence 789999999999999999999885 44555555533333333 34899999999 9999998721111 1
Q ss_pred CCCc--c--cchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHH
Q 005131 166 SSGI--F--WDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKV 240 (713)
Q Consensus 166 ~~g~--~--~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl 240 (713)
.+.. + ++||++|+.+|.+|+|++|+|+||||||||+|| .+|++++|++|+++|+.+++..| .++|++
T Consensus 127 ~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~~e~~~l~~~G------~~~~~~-- 198 (227)
T cd04234 127 DGEITTLGRGGSDYSAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAYFG------AKVLHP-- 198 (227)
T ss_pred CCCEEEeeCCCcHHHHHHHHHHhCCCEEEEEECCCccCCCCCCCCCCceEcCcCCHHHHHHHHhCC------ccccCH--
Confidence 1111 1 579999999999999999999999999999999 78999999999999999987754 789988
Q ss_pred HHHHHHHHcCCcEEEEeCCCch
Q 005131 241 KAAVNAAYAGIPVVITSGYSDE 262 (713)
Q Consensus 241 ~aa~~a~~~gv~v~I~~g~~~~ 262 (713)
+++..+.++|+|++|.|+.+|+
T Consensus 199 ~a~~~a~~~~i~i~i~~~~~~~ 220 (227)
T cd04234 199 RAVEPARKANIPIRVKNTFNPE 220 (227)
T ss_pred HHHHHHHHcCCeEEEEeCCCCC
Confidence 7999999999999999999884
No 149
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=99.97 E-value=4.5e-30 Score=267.76 Aligned_cols=245 Identities=20% Similarity=0.279 Sum_probs=185.7
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchH-
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDG- 89 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~- 89 (713)
.+++|||+||+++.++. ..+.++++|+.++..|.++|||||||+++.+. ++.++.......+++.++.+.-.
T Consensus 23 ~~~~VIk~gG~~~~~~~------l~~~~~~di~~l~~~g~~~VlVHGgg~~i~~~-~~~~g~~~~~~~G~rvT~~~~l~~ 95 (284)
T CHL00202 23 GRIMVIKYGGAAMKNLI------LKADIIKDILFLSCIGLKIVVVHGGGPEINFW-LKQLNISPKFWNGIRVTDKVTMEI 95 (284)
T ss_pred CCeEEEEEChHHhcCcc------hHHHHHHHHHHHHHCCCcEEEEeCCcHHHHHH-HHHCCCCCEeECCcccCCHHHHHH
Confidence 46899999999998754 35689999999999999999999999888886 44444444334556666533111
Q ss_pred HHHHHcchHHHHHHHHHHhhhcCCccceee------ec-----ccccCchhHHHHHH-HHHHHHHhCCceeEEcCCCcee
Q 005131 90 KACAAVGQNSIMALYDTLFSELDLTSAQLL------VT-----DNDFRDKEFRSQLS-ETVKSLLSLRVIPVFNENDAVS 157 (713)
Q Consensus 90 ~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~------~~-----~~~~~~~~~~~~~~-~~i~~~l~~g~vpV~~g~d~v~ 157 (713)
......|+.... +.+.|.+.|+++..+. ++ ..++++.+....++ +.|+.+|+.|+|||++| +
T Consensus 96 ~~~~l~g~ln~~--lv~~L~~~Gv~av~l~~~d~~~i~a~~~~~~d~~~~G~i~~v~~~~i~~ll~~g~iPVi~~---~- 169 (284)
T CHL00202 96 VEMVLAGKVNKD--LVGSINANGGKAVGLCGKDANLIVARASDKKDLGLVGEIQQVDPQLIDMLLEKNYIPVIAS---V- 169 (284)
T ss_pred HHHHHhhHHHHH--HHHHHHhCCCCeeeeeeccCCEEEEEeCCCcccccceeEEecCHHHHHHHHHCCCEEEECC---C-
Confidence 111223333332 4555677777654221 11 12556666666665 99999999999999986 2
Q ss_pred cCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCch
Q 005131 158 TRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGM 236 (713)
Q Consensus 158 ~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m 236 (713)
+....+..+ +|+|++|+.+|.+|+|++|+|+|||||||+++ .+| +++|++|+++|+++++..+ +++|||
T Consensus 170 ----~~~~~g~~~ni~~D~~A~~lA~~l~Ad~li~lTdv~Gv~~~~-~d~-~~~i~~i~~~e~~~l~~~g----~~tGGM 239 (284)
T CHL00202 170 ----AADHDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADI-NDP-NSLISTLNIKEARNLASTG----IISGGM 239 (284)
T ss_pred ----ccCCCCcEEecCHHHHHHHHHHHhCCCEEEEEeCChhhcCCC-CCC-CCccccccHHHHHHHHhcC----CCCCCH
Confidence 222244445 79999999999999999999999999999852 222 5899999999999988654 789999
Q ss_pred HHHHHHHHHHHHcCCc-EEEEeCCCchhH-HHHhcCCcceeEEe
Q 005131 237 TAKVKAAVNAAYAGIP-VVITSGYSDENI-LKVLQGERIGTLFH 278 (713)
Q Consensus 237 ~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~tge~iGT~i~ 278 (713)
.+||++|..++++|++ ++|++++.|+++ .++++++..||.+.
T Consensus 240 ~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~g~GT~i~ 283 (284)
T CHL00202 240 IPKVNCCIRALAQGVEAAHIIDGKEKHALLLEILTEKGIGSMLV 283 (284)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCChHHHHHhcCCCCceEEe
Confidence 9999999999999998 899999999974 89999999999874
No 150
>PLN02512 acetylglutamate kinase
Probab=99.97 E-value=9.7e-30 Score=267.89 Aligned_cols=246 Identities=22% Similarity=0.277 Sum_probs=184.6
Q ss_pred ccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchH
Q 005131 10 DVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDG 89 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 89 (713)
+.+++||||||+++.+++ ....++++|+.+++.|.++|||||||+++... +..++.......+.+.++...-.
T Consensus 46 ~~~tiVIKlGGs~i~d~~------~~~~~~~di~~l~~~g~~iVlVHGgG~~i~~~-~~~~gi~~~~~~G~rvT~~~~le 118 (309)
T PLN02512 46 RGKTVVVKYGGAAMKDPE------LKAGVIRDLVLLSCVGLRPVLVHGGGPEINSW-LKKVGIEPQFKNGLRVTDAETME 118 (309)
T ss_pred CCCeEEEEECCeeccChh------HHHHHHHHHHHHHHCCCCEEEEECCcHHHHHH-HHHcCCCCcCCCCCcCCCHHHHH
Confidence 357899999999999865 45679999998889999999999998876665 45555444333445555432111
Q ss_pred HH-HHHcchHHHHHHHHHHhhhcCCccceee------ecc------cccCchhHHHHHH-HHHHHHHhCCceeEEcCCCc
Q 005131 90 KA-CAAVGQNSIMALYDTLFSELDLTSAQLL------VTD------NDFRDKEFRSQLS-ETVKSLLSLRVIPVFNENDA 155 (713)
Q Consensus 90 ~~-~~~~g~~~~~~l~~~~l~~~gi~~~~~~------~~~------~~~~~~~~~~~~~-~~i~~~l~~g~vpV~~g~d~ 155 (713)
.. ...+|+.. ..+.+.|.+.|+++..+. ++. -++++.+....+. +.|+.+|+.|.|||++|
T Consensus 119 i~~~~l~g~ln--~~lv~~L~~~Gv~av~l~g~d~~~i~a~~~~~~~~~~~~G~i~~v~~~~i~~lL~~g~IPVi~~--- 193 (309)
T PLN02512 119 VVEMVLVGKVN--KSLVSLINKAGGTAVGLSGKDGRLLRARPSPNSADLGFVGEVTRVDPTVLRPLVDDGHIPVIAT--- 193 (309)
T ss_pred HHHHHHhhHHH--HHHHHHHHHcCCCeEEeehhhCCEEEEEEcCcCccccccceeeecCHHHHHHHHhCCCEEEEeC---
Confidence 11 11123222 235566777887764331 111 1455666666665 99999999999999997
Q ss_pred eecCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccC
Q 005131 156 VSTRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRG 234 (713)
Q Consensus 156 v~~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g 234 (713)
+.. ...+..+ +|+|++|++||.+|+|++|+|+|||||||++|| +++++|++|+++|+++++..+ +++|
T Consensus 194 ~~~-----d~~g~~~~i~~D~~A~~lA~~L~Ad~li~lTdV~GV~~~~~--~~~~lI~~i~~~e~~~l~~~~----~vtG 262 (309)
T PLN02512 194 VAA-----DEDGQAYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKD--DPGSLVKELDIKGVRKLIADG----KIAG 262 (309)
T ss_pred ceE-----CCCCCEeccCHHHHHHHHHHHcCCCEEEEEeCCcceeCCCC--CCcCCCcccCHHHHHHHHhCC----CCCC
Confidence 111 1233334 799999999999999999999999999998753 348899999999999887654 7899
Q ss_pred chHHHHHHHHHHHHcCCc-EEEEeCCCchhH-HHHhcCCcceeEEe
Q 005131 235 GMTAKVKAAVNAAYAGIP-VVITSGYSDENI-LKVLQGERIGTLFH 278 (713)
Q Consensus 235 ~m~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~tge~iGT~i~ 278 (713)
||.+||+++..+.++|++ ++|+++..|+++ .++++++..||++.
T Consensus 263 GM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~ 308 (309)
T PLN02512 263 GMIPKVECCVRSLAQGVKTAHIIDGRVPHSLLLEILTDEGAGTMIT 308 (309)
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecCCCCChHHHHHhcCCCCeeEEe
Confidence 999999999999999997 999999999886 47889999999885
No 151
>COG0527 LysC Aspartokinases [Amino acid transport and metabolism]
Probab=99.97 E-value=4.3e-30 Score=280.21 Aligned_cols=239 Identities=22% Similarity=0.273 Sum_probs=194.7
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCc---------------
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINS--------------- 75 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~--------------- 75 (713)
|+++|.|||||++.+.+ +++++++.++...+.|+++|+|+++++.+|+.+++......+
T Consensus 1 m~~iV~KFGGTSva~~e------~i~~va~iv~~~~~~g~~vVVVvSA~~~vTd~Lv~~a~~~~~~~~~~~~~~~~~~~~ 74 (447)
T COG0527 1 MRLIVQKFGGTSVADAE------RILRVADIVKEDSEEGVKVVVVVSAMGGVTDLLVALAEGAESGRDAVAEQRHRDIAS 74 (447)
T ss_pred CceEEEEeCCcccCCHH------HHHHHHHHHHhhhhcCCcEEEEECCCCCchHHHHHHHhhcccccchhHHHHHHHHHH
Confidence 34899999999999854 899999999999899999999999999899998887653110
Q ss_pred ccccccC-----------------------ccccchHHHHHHcchHHHHHHHHHHhhhcCCccce------eeecccccC
Q 005131 76 SFADLQK-----------------------PQIELDGKACAAVGQNSIMALYDTLFSELDLTSAQ------LLVTDNDFR 126 (713)
Q Consensus 76 ~~~~~~~-----------------------~~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~------~~~~~~~~~ 126 (713)
.+...+. ....-..+.+.+.|+..+..++...|++.|+++.. .+.++.+++
T Consensus 75 el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ilS~GE~~Sa~lla~~L~~~Gv~A~~~~~~~~~i~t~~~~~ 154 (447)
T COG0527 75 ELILDPFIAARLAEVIAEFKKVLLGIALLGEVSPRERDELLSLGERLSAALLAAALNALGVDARSLDGRQAGIATDSNHG 154 (447)
T ss_pred HHhhcchhhhhHhhhHhhhhHHhhhhhhccCCCHHHHHHHHhhchHHHHHHHHHHHHhCCCceEEEchHHceeeecCccc
Confidence 0000000 00112346889999999999999999999999852 245555666
Q ss_pred chhHHHHHHHH-HHHHHhCCceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEEEEeecCCcccc
Q 005131 127 DKEFRSQLSET-VKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLLILLSDVEGLYS 200 (713)
Q Consensus 127 ~~~~~~~~~~~-i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~ 200 (713)
+........+. +..+++.|.|||++| |.+.+..|.+ ++|||+|+.||..|+||++.||||||||||
T Consensus 155 ~a~i~~~~~~~~l~~~~~~~~v~Vv~G--------F~G~~~~G~~tTLGRGGSD~SA~~laa~l~Ad~~~I~TDVdGI~T 226 (447)
T COG0527 155 NARILDEDSERRLLRLLEEGKVPVVAG--------FQGINEDGETTTLGRGGSDYSAAALAAALGADEVEIWTDVDGVYT 226 (447)
T ss_pred ccccchhhhhhhHHHHhcCCcEEEecC--------ceeecCCCCEEEeCCCcHHHHHHHHHHHcCCCEEEEEECCCCCcc
Confidence 66655444555 888999999999998 2333344444 899999999999999999999999999999
Q ss_pred CCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEec
Q 005131 201 GPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQ 279 (713)
Q Consensus 201 ~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~ 279 (713)
+|| .+|+|++|++|||+|+.|+.++| ++++|| +++.++++++||++|.|.++|+ ..||+|..
T Consensus 227 aDPRiVp~Ar~i~~isyeEa~ELA~~G------AkVLHp--rav~pa~~~~Ip~~i~~t~~p~---------~~GTlI~~ 289 (447)
T COG0527 227 ADPRIVPDARLLPEISYEEALELAYLG------AKVLHP--RAVEPAMRSGIPLRIKNTFNPD---------APGTLITA 289 (447)
T ss_pred CCCCCCCcceEcCccCHHHHHHHHHCC------chhcCH--HHHHHHHhcCCcEEEEecCCCC---------CCceEEec
Confidence 999 99999999999999999998865 899999 7999999999999999999884 46999988
Q ss_pred C
Q 005131 280 D 280 (713)
Q Consensus 280 ~ 280 (713)
.
T Consensus 290 ~ 290 (447)
T COG0527 290 E 290 (447)
T ss_pred C
Confidence 5
No 152
>TIGR00746 arcC carbamate kinase. The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff.
Probab=99.97 E-value=2.6e-29 Score=261.57 Aligned_cols=246 Identities=24% Similarity=0.341 Sum_probs=186.7
Q ss_pred ceEEEEeCccceecCC--C--cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccc
Q 005131 12 KRIVVKVGTAVVTRSD--G--RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIEL 87 (713)
Q Consensus 12 ~~iViKlGGs~l~~~~--~--~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 87 (713)
|++|||+||++|.++. + +++...++.++++|+.+++.|+++|||||||+++|...++...... .++ ..
T Consensus 1 ~riViklGgnaL~~~g~~~~~~~~~~~i~~~a~~ia~l~~~g~~vviv~gngpqvG~~~l~~~~~~~----~~~----~~ 72 (310)
T TIGR00746 1 KRVVVALGGNALLQRGEKGSAEAQRDNVRQTAPQIAKLIKRGYELVITHGNGPQVGNLLLQNQAADS----EVP----AM 72 (310)
T ss_pred CeEEEEECHHHhCCCCCCCCcchhHHHHHHHHHHHHHHHHCCCEEEEEECChHHHHHHHhccccccc----cCC----CC
Confidence 6899999999999753 2 3667899999999999999999999999999999987655322111 111 12
Q ss_pred hHHHHHHcchHHHHHHHHHHhh----hcCCcc------ceeeecccc--cCchhHH------------------------
Q 005131 88 DGKACAAVGQNSIMALYDTLFS----ELDLTS------AQLLVTDND--FRDKEFR------------------------ 131 (713)
Q Consensus 88 ~~~~~~~~g~~~~~~l~~~~l~----~~gi~~------~~~~~~~~~--~~~~~~~------------------------ 131 (713)
..+++.+.+|-.+..++..+|+ +.|++. +|.+++.+| |.++..+
T Consensus 73 p~~~~~A~~qg~lg~~~~~~l~~~l~~~g~~~~v~~~vtqv~v~~~D~af~~p~k~ig~~y~~~~a~~~~~~~~~~~~~d 152 (310)
T TIGR00746 73 PLDVLGAMSQGMIGYMLQQALNNELPKRGMEKPVATVLTQTIVDPKDPAFQNPTKPIGPFYTEEEAKRLAAEKGWIVKED 152 (310)
T ss_pred cchHHHHhhHHHHHHHHHHHHHHHHHhcCCCccceEEEEEEEECCCcccccCCCCcCCCCcCHHHHHHHHHHcCCeEeec
Confidence 2357777777776666666666 777433 477777666 3322222
Q ss_pred ------H---------HH-HHHHHHHHhCCceeEEcCCCceecCCCcccCCCCc------ccchhHHHHHHHhhhCCCEE
Q 005131 132 ------S---------QL-SETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGI------FWDNDSLAALLALELKADLL 189 (713)
Q Consensus 132 ------~---------~~-~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~------~~~sD~~A~~lA~~l~Ad~l 189 (713)
+ .+ .+.|+.+|+.|.++|.+| +++.|.....+. ++|+|++|+.+|.+|+||+|
T Consensus 153 ~~~~~rrvv~sp~p~~iv~~~~I~~LL~~G~iVI~~g-----gggiPvi~e~~~~~g~e~~id~D~lAa~lA~~l~AD~L 227 (310)
T TIGR00746 153 AGRGWRRVVPSPRPKDIVEAETIKTLVENGVIVISSG-----GGGVPVVLEGAELKGVEAVIDKDLASEKLAEEVNADIL 227 (310)
T ss_pred CCCcceEeecCCCchhhccHHHHHHHHHCCCEEEeCC-----CCCcCEEecCCeEEeeEecCCHHHHHHHHHHHhCCCEE
Confidence 1 12 389999999999777665 333333222221 27999999999999999999
Q ss_pred EEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcC-CcEEEEeCCCchhHHHHh
Q 005131 190 ILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAG-IPVVITSGYSDENILKVL 268 (713)
Q Consensus 190 i~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~g-v~v~I~~g~~~~~l~~~~ 268 (713)
+|+|||||||++ |.+|++++|++++++|+++++.. ..+.+|+|.+|+++|..++++| .+++|++ ++.+.+++
T Consensus 228 IiLTDVdGVy~~-~~~p~a~~i~~it~~e~~~~~~~---g~~~tGgM~~Kl~AA~~~~~~g~~~v~I~~---~~~i~~~l 300 (310)
T TIGR00746 228 VILTDVDAVYIN-YGKPDEKALREVTVEELEDYYKA---GHFAAGSMGPKVEAAIEFVESGGKRAIITS---LENAVEAL 300 (310)
T ss_pred EEEeCCCceeCC-CCCCCCcCCcCcCHHHHHHHHhc---CCcCCCCcHHHHHHHHHHHHhCCCeEEEec---hHHHHHHH
Confidence 999999999997 45678999999999999887753 3488999999999998888865 6699998 88999999
Q ss_pred cCCcceeEEe
Q 005131 269 QGERIGTLFH 278 (713)
Q Consensus 269 tge~iGT~i~ 278 (713)
.|+ .||.+.
T Consensus 301 ~G~-~GT~I~ 309 (310)
T TIGR00746 301 EGK-AGTRVT 309 (310)
T ss_pred CCC-CCcEEe
Confidence 999 899874
No 153
>cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati
Probab=99.97 E-value=1.6e-29 Score=258.49 Aligned_cols=221 Identities=21% Similarity=0.296 Sum_probs=172.5
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHH
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKAC 92 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 92 (713)
.+|||||||++.+++ .+++++++|+.+++.|++++|||||++..++.+++...... .+. ..-..+.+
T Consensus 1 ~iViK~GGs~l~~~~------~~~~~~~~i~~l~~~g~~~viV~sg~g~~~~~ll~~~~~~~-~~~------~~~~~~~i 67 (239)
T cd04246 1 IIVQKFGGTSVADIE------RIKRVAERIKKAVKKGYQVVVVVSAMGGTTDELIGLAKEVS-PRP------SPRELDML 67 (239)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHhc-cCC------CHHHHHHH
Confidence 379999999998743 78999999999999999999999987777777766544322 111 11123567
Q ss_pred HHcchHHHHHHHHHHhhhcCCcccee------eecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCC
Q 005131 93 AAVGQNSIMALYDTLFSELDLTSAQL------LVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDS 166 (713)
Q Consensus 93 ~~~g~~~~~~l~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~ 166 (713)
.+.|+..+..++.+.|++.|+++..+ +++...+.+........+.+..++++|.|||++|+-.. ...
T Consensus 68 ~~~Ge~~~~~~~~~~l~~~g~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~l~~ll~~g~ipVi~g~~~~-------~~~ 140 (239)
T cd04246 68 LSTGEQISAALLAMALNRLGIKAISLTGWQAGILTDDHHGNARIIDIDPKRILEALEEGDVVVVAGFQGV-------NED 140 (239)
T ss_pred HHHhHHHHHHHHHHHHHhCCCCeEEeccccCCEEecCCCCceeechhhHHHHHHHHhcCCEEEEcCcccc-------CCC
Confidence 78898888888899999999987433 34444444333333334889999999999999972111 111
Q ss_pred CCc----ccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHH
Q 005131 167 SGI----FWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVK 241 (713)
Q Consensus 167 ~g~----~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~ 241 (713)
+.. +++||++|+.+|.+|+|++|+|+|||||||++|| .+|++++|++|+++|+++++..| ...|++ +
T Consensus 141 g~~~~l~~g~~D~~A~~lA~~l~A~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~l~~~G------~~~~~~--~ 212 (239)
T cd04246 141 GEITTLGRGGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLEMASLG------AKVLHP--R 212 (239)
T ss_pred CCEEecCCCChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHHHHhCC------CcccCH--H
Confidence 111 2589999999999999999999999999999999 78999999999999999987654 567787 7
Q ss_pred HHHHHHHcCCcEEEEeCCCc
Q 005131 242 AAVNAAYAGIPVVITSGYSD 261 (713)
Q Consensus 242 aa~~a~~~gv~v~I~~g~~~ 261 (713)
++.++.++|+|++|.|+++|
T Consensus 213 a~~~a~~~gi~i~i~~~~~~ 232 (239)
T cd04246 213 SVELAKKYNVPLRVRSSFSE 232 (239)
T ss_pred HHHHHHHCCCeEEEecCCCC
Confidence 99999999999999999988
No 154
>PRK00942 acetylglutamate kinase; Provisional
Probab=99.97 E-value=1.3e-29 Score=265.35 Aligned_cols=244 Identities=25% Similarity=0.325 Sum_probs=184.7
Q ss_pred ccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccc-h
Q 005131 10 DVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIEL-D 88 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l-~ 88 (713)
+++++|||||||+|++++ .++.++++|+.+++.|.++||||||++.+.+. +...+.......+++.+.... .
T Consensus 22 ~~~~iViK~GGs~l~~~~------~~~~l~~~i~~l~~~g~~vVlVhGgg~~~~~~-~~~~g~~~~~~~g~~~t~~~~l~ 94 (283)
T PRK00942 22 MGKTIVIKYGGNAMTDEE------LKEAFARDIVLLKQVGINPVVVHGGGPQIDEL-LKKLGIESEFVNGLRVTDAETME 94 (283)
T ss_pred cCCeEEEEEChHHhcCcc------hHHHHHHHHHHHHHCCCCEEEEeCChHHHHHH-HHHCCCCcEeeCCEecCCHHHHH
Confidence 467899999999999876 57889999999999999999999998766664 443333322222344333211 1
Q ss_pred HHHHHHcchHHHHHHHHHHhhhcCCccceee------eccc------ccCchhHHHHHH-HHHHHHHhCCceeEEcCCCc
Q 005131 89 GKACAAVGQNSIMALYDTLFSELDLTSAQLL------VTDN------DFRDKEFRSQLS-ETVKSLLSLRVIPVFNENDA 155 (713)
Q Consensus 89 ~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~------~~~~------~~~~~~~~~~~~-~~i~~~l~~g~vpV~~g~d~ 155 (713)
.......|+.. ..+.+.|.+.|+++..+. ++.. ++++.+....++ +.|+.+|++|.|||+++
T Consensus 95 ~~~~a~~G~l~--~~i~~~L~~~Gv~a~~l~~~~~~~~ta~~~~~~~~~~~~g~i~~i~~~~l~~ll~~g~vpVv~~--- 169 (283)
T PRK00942 95 VVEMVLAGKVN--KELVSLINKHGGKAVGLSGKDGGLITAKKLEEDEDLGFVGEVTPVNPALLEALLEAGYIPVISP--- 169 (283)
T ss_pred HHHHHHcCchH--HHHHHHHHhCCCCccceeeccCCEEEEEECCCCCCCccccceEEECHHHHHHHHHCCCEEEEcC---
Confidence 11112225443 335577888888775432 2222 344445555444 99999999999999986
Q ss_pred eecCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccC
Q 005131 156 VSTRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRG 234 (713)
Q Consensus 156 v~~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g 234 (713)
+. ....++.+ +|+|++|+.||.+|+|++|+|+|||||||++ ++++|++|+++|+.+++..+ +++|
T Consensus 170 ~~-----~~~~g~~~~l~~D~~A~~lA~~l~A~~li~~tdv~Gv~~~-----~~~~i~~i~~~e~~~~~~~~----~~tg 235 (283)
T PRK00942 170 IG-----VGEDGETYNINADTAAGAIAAALGAEKLILLTDVPGVLDD-----KGQLISELTASEAEELIEDG----VITG 235 (283)
T ss_pred cE-----ECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCcccccC-----CCcccccCCHHHHHHHHHcC----CCCC
Confidence 22 22233434 9999999999999999999999999999987 49999999999999987654 6889
Q ss_pred chHHHHHHHHHHHHcCCc-EEEEeCCCchh-HHHHhcCCcceeEEec
Q 005131 235 GMTAKVKAAVNAAYAGIP-VVITSGYSDEN-ILKVLQGERIGTLFHQ 279 (713)
Q Consensus 235 ~m~~Kl~aa~~a~~~gv~-v~I~~g~~~~~-l~~~~tge~iGT~i~~ 279 (713)
+|.+|+++|..++++|++ ++|++++.|++ +.++++++..||++.+
T Consensus 236 gm~~Kl~~a~~~~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~ 282 (283)
T PRK00942 236 GMIPKVEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVP 282 (283)
T ss_pred chHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCcceEEec
Confidence 999999999999999986 99999999999 7899999999999975
No 155
>PRK08841 aspartate kinase; Validated
Probab=99.97 E-value=2.2e-29 Score=272.94 Aligned_cols=229 Identities=22% Similarity=0.309 Sum_probs=182.9
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
|+++|+||||+++.+.+ .+++++++|+.+.+.|.++||||||++..++.++......+ . .. .....+
T Consensus 1 m~~~V~KfGGtsv~~~~------~i~~va~~I~~~~~~g~~vvvVvSa~~~~td~ll~~~~~~~----~--~~-~~~~~d 67 (392)
T PRK08841 1 MPLIVQKFGGTSVGSIE------RIQTVAEHIIKAKNDGNQVVVVVSAMAGETNRLLGLAKQVD----S--VP-TARELD 67 (392)
T ss_pred CCeEEEeECcccCCCHH------HHHHHHHHHHHHHHCCCCEEEEECCCchHHHHHHHhhhhhc----c--CC-CHHHHH
Confidence 46899999999998854 79999999999999999999999999988988766432211 1 11 112346
Q ss_pred HHHHcchHHHHHHHHHHhhhcCCcccee------eecccccCchhHHHHH-HHHHHHHHhCCceeEEcCCCceecCCCcc
Q 005131 91 ACAAVGQNSIMALYDTLFSELDLTSAQL------LVTDNDFRDKEFRSQL-SETVKSLLSLRVIPVFNENDAVSTRKAPY 163 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~-~~~i~~~l~~g~vpV~~g~d~v~~~~~~~ 163 (713)
.+.+.|+..+..++...|++.|+++..+ +++++.+.... +..+ .+.+..+++.|.|||++|+-.
T Consensus 68 ~l~s~GE~~s~~lla~~L~~~Gi~a~~l~~~~~~i~t~~~~~~~~-i~~~~~~~i~~ll~~~~vpVv~Gf~g-------- 138 (392)
T PRK08841 68 VLLSAGEQVSMALLAMTLNKLGYAARSLTGAQANIVTDNQHNDAT-IKHIDTSTITELLEQDQIVIVAGFQG-------- 138 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEehhHcCEEecCCCCCce-echhhHHHHHHHHhCCCEEEEeCCcc--------
Confidence 8889999999999999999999987422 45555443333 3333 488999999999999987211
Q ss_pred cCCCCcc-----cchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchH
Q 005131 164 EDSSGIF-----WDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMT 237 (713)
Q Consensus 164 ~~~~g~~-----~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~ 237 (713)
.+..|.+ ++||++|+.+|.+|+||+|++||||||||++|| .+|+|++|++|+|+|+.+++.+| ...||
T Consensus 139 ~~~~g~~ttlgrggsD~tAa~lA~~L~Ad~l~i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~ela~~G------a~vlh 212 (392)
T PRK08841 139 RNENGDITTLGRGGSDTTAVALAGALNADECQIFTDVDGVYTCDPRVVKNARKLDVIDFPSMEAMARKG------AKVLH 212 (392)
T ss_pred cCCCCCEEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCcCCCCCCCCceEcccccHHHHHHHHhcC------ccccC
Confidence 1122222 689999999999999999999999999999999 89999999999999999987754 78999
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEec
Q 005131 238 AKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQ 279 (713)
Q Consensus 238 ~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~ 279 (713)
| +++.+++++|||++|.|++++ ..||+|..
T Consensus 213 p--~ai~~a~~~~Ipi~i~n~~~~----------~~GT~I~~ 242 (392)
T PRK08841 213 L--PSVQHAWKHSVPLRVLSSFEV----------GEGTLIKG 242 (392)
T ss_pred H--HHHHHHHHCCCeEEEEecCCC----------CCCeEEEe
Confidence 9 699999999999999998865 23888853
No 156
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=99.96 E-value=6.6e-30 Score=263.59 Aligned_cols=239 Identities=28% Similarity=0.380 Sum_probs=187.3
Q ss_pred EEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHHHH
Q 005131 15 VVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKACAA 94 (713)
Q Consensus 15 ViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 94 (713)
|||||||++++++ .+++++++|+.+++.|+++||||||++++++.+.+..... ....+.+.+ ........+
T Consensus 1 ViKiGGs~l~~~~------~~~~~~~~i~~l~~~~~~~viV~ggg~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~ 71 (248)
T cd02115 1 VIKFGGSSVSSEE------RLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHGELL-GYARGLRIT--DRETDALAA 71 (248)
T ss_pred CEeeCccccCCHH------HHHHHHHHHHHHHhcCCCEEEEECCCCCcCHHHHHHHHhh-hhhhccCCC--HHHHHHHHH
Confidence 7999999998754 6899999999998889999999999999999865543211 111122222 122346777
Q ss_pred cchHHHHHHHHHHhhhcCCccceee-----ecccccCchhHHHHH-HHHHHHHHhCCceeEEcCCCceecCCCcccCCCC
Q 005131 95 VGQNSIMALYDTLFSELDLTSAQLL-----VTDNDFRDKEFRSQL-SETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSG 168 (713)
Q Consensus 95 ~g~~~~~~l~~~~l~~~gi~~~~~~-----~~~~~~~~~~~~~~~-~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g 168 (713)
.++..+..++...|.+.|+++..+. +...++++.+..... .+.|+.+|+.|.|||++|+...... ..+
T Consensus 72 ~~~~~~~~~~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~l~~~~ipVv~g~~~~~~~------~~~ 145 (248)
T cd02115 72 MGEGMSNLLIAAALEQHGIKAVPLDLTQAGFASPNQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDEK------ETG 145 (248)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEchHHcCeEeCCCCCcccceeeCHHHHHHHHhCCcEEEecCeEeccCC------cee
Confidence 7777777888999999999876443 223344444444433 3889999999999999983332210 122
Q ss_pred cc--cchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHH
Q 005131 169 IF--WDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVN 245 (713)
Q Consensus 169 ~~--~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~ 245 (713)
.+ +++|++|+.+|.+|+|++|+|+|||||||++|| .+|++++|++|+++|+.+++.. |.|..|++++..
T Consensus 146 ~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~--------g~~~~k~~a~~~ 217 (248)
T cd02115 146 TLGRGGSDSTAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYA--------GAMVLKPKAADP 217 (248)
T ss_pred eecCCCHHHHHHHHHHHcCCCEEEEEecCCeeecCCCCcCCcCeECCcCCHHHHHHHHHc--------CCCccCHHHHHH
Confidence 22 899999999999999999999999999999999 8899999999999999987653 458899999999
Q ss_pred HHHcCCcEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 246 AAYAGIPVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 246 a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
++++|++++|+++..|+++ ++++++..||+|
T Consensus 218 ~~~~~~~v~I~~~~~~~~l-~~~~~~~~GT~I 248 (248)
T cd02115 218 AARAGIPVRIANTENPGAL-ALFTPDGGGTLI 248 (248)
T ss_pred HHHcCCcEEEEeCCCcccc-cccCCCCCCCCC
Confidence 9999999999999999999 999999889864
No 157
>cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis. In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A
Probab=99.96 E-value=2.1e-29 Score=263.10 Aligned_cols=244 Identities=23% Similarity=0.312 Sum_probs=182.0
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
++++|||||||++++++ .+.+++++|+.+++.|.++||||||++++++.+ ..++.......+++.++...-..
T Consensus 14 ~~~~ViKlGGs~i~~~~------~~~~~~~~i~~l~~~g~~~ViVhG~g~~~~~~l-~~~g~~~~~~~g~r~t~~~~~~~ 86 (279)
T cd04250 14 GKTVVIKYGGNAMKDEE------LKESFARDIVLLKYVGINPVVVHGGGPEINEML-KKLGIESEFVNGLRVTDEETMEI 86 (279)
T ss_pred CCEEEEEEChHHhcCcc------HHHHHHHHHHHHHHCCCCEEEEcCCcHHHHHHH-HHCCCCCEeECCeecCCHHHHHH
Confidence 57899999999999876 567899999999899999999999988777764 33333322222344433221111
Q ss_pred H-HHHcchHHHHHHHHHHhhhcCCccceee------ecc-----------cccCchhHHHHHH-HHHHHHHhCCceeEEc
Q 005131 91 A-CAAVGQNSIMALYDTLFSELDLTSAQLL------VTD-----------NDFRDKEFRSQLS-ETVKSLLSLRVIPVFN 151 (713)
Q Consensus 91 ~-~~~~g~~~~~~l~~~~l~~~gi~~~~~~------~~~-----------~~~~~~~~~~~~~-~~i~~~l~~g~vpV~~ 151 (713)
. ....|+.. ..+.+.|.+.|+++..+. ++. .++...+....+. +.|+.+|+.|.|||++
T Consensus 87 ~~~~~~g~ln--~~l~~~L~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~i~~ll~~g~IPVi~ 164 (279)
T cd04250 87 VEMVLVGKVN--KEIVSLINRAGGKAVGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNPELLETLLEAGYIPVIA 164 (279)
T ss_pred HHHHHcCchH--HHHHHHHHHcCCCcceeecCCCCEEEEEECcccccCCCcccCcccceEEEcHHHHHHHHHCCCeEEEc
Confidence 1 11115332 335677888887764322 221 1344455555554 9999999999999998
Q ss_pred CCCceecCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCc
Q 005131 152 ENDAVSTRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSR 230 (713)
Q Consensus 152 g~d~v~~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~ 230 (713)
| +.. ...++.+ +|+|++|+.+|.+|+|++|+|+|||||||++||. ++++|++|+++|+++++..+
T Consensus 165 ~---~~~-----~~~g~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~--~~~~i~~i~~~e~~~l~~~~---- 230 (279)
T cd04250 165 P---VGV-----GEDGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPND--PGSLISEISLKEAEELIADG---- 230 (279)
T ss_pred C---Ccc-----CCCCcEEEeCHHHHHHHHHHHhCCCEEEEEECCcccccCCCC--CccccccCCHHHHHHHHHcC----
Confidence 6 211 1233334 7999999999999999999999999999999882 48999999999999887654
Q ss_pred cccCchHHHHHHHHHHHHcCCc-EEEEeCCCchhH-HHHhcCCcceeEE
Q 005131 231 VGRGGMTAKVKAAVNAAYAGIP-VVITSGYSDENI-LKVLQGERIGTLF 277 (713)
Q Consensus 231 ~~~g~m~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~tge~iGT~i 277 (713)
+++|+|.+|+++|..++++|++ ++|++++.|+++ .++++++..||++
T Consensus 231 ~~tGgm~~Kl~~a~~a~~~g~~~v~I~~g~~~~~ll~~~~~~~~~GT~i 279 (279)
T cd04250 231 IISGGMIPKVEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279 (279)
T ss_pred CCCCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCCccCC
Confidence 7899999999999999999998 999999999965 7999999999864
No 158
>PRK14558 pyrH uridylate kinase; Provisional
Probab=99.96 E-value=6.7e-29 Score=252.27 Aligned_cols=222 Identities=24% Similarity=0.358 Sum_probs=172.0
Q ss_pred ceEEEEeCccceecCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 12 KRIVVKVGTAVVTRSDG-RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 12 ~~iViKlGGs~l~~~~~-~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
+++|||+|||+|+++++ +++.+.+++++++|+++++.|++++||||||. +.+-. .+.++. ..
T Consensus 1 ~riviKlGgs~lt~~~~~~~~~~~i~~la~~i~~~~~~g~~viiV~GgGs-~~~g~---------~~~~~~-------~~ 63 (231)
T PRK14558 1 KRVLLKLSGEALSGEGEKGFDPERVNYLVNEIKSVVEYGFKIGIVIGAGN-LFRGV---------ELKELS-------PT 63 (231)
T ss_pred CeEEEEeeHHHccCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEECccH-HHHHH---------hccCCC-------hH
Confidence 57999999999998754 79999999999999999999999999998753 32210 001111 11
Q ss_pred HHHHcchHH--HH-HHHHHHhhhcCCccc---eeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCccc
Q 005131 91 ACAAVGQNS--IM-ALYDTLFSELDLTSA---QLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYE 164 (713)
Q Consensus 91 ~~~~~g~~~--~~-~l~~~~l~~~gi~~~---~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~ 164 (713)
....+|+.+ +. .++...|.+.|+++. +++. ..++ .....+.+..+|+.|.|||++|+.
T Consensus 64 ~~d~ig~~~~~ln~~~~~~~l~~~gi~a~~~~~~~~-~~~~-----~~~~~~~i~~ll~~g~vpV~~G~~---------- 127 (231)
T PRK14558 64 RADQIGMLGTVINALYLKDIFEKSGLKAVIVSQIVN-LPSV-----EPINYDDIELYFRAGYIVIFAGGT---------- 127 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCeEEeccccc-cchh-----hhhhHHHHHHHHHCCCEEEEECCC----------
Confidence 223344432 22 346888999999863 3221 1111 112247899999999999999721
Q ss_pred CCCCcccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHH
Q 005131 165 DSSGIFWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAA 243 (713)
Q Consensus 165 ~~~g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa 243 (713)
+.+++++|++|+++|..|+|+.|+++|||||||++|| .+|+|++|++|+++|+.++ +..+|++ +++
T Consensus 128 --~~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---------g~~~~d~--~a~ 194 (231)
T PRK14558 128 --SNPFFTTDTAAALRAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKM---------GLKVMDT--EAF 194 (231)
T ss_pred --CCCCCCcHHHHHHHHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHc---------CcccccH--HHH
Confidence 1234678999999999999999999999999999999 8999999999999888763 2467888 688
Q ss_pred HHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEec
Q 005131 244 VNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQ 279 (713)
Q Consensus 244 ~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~ 279 (713)
..|.++|++++|+|+++|+++.+++.|+..||.+.+
T Consensus 195 ~~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~ 230 (231)
T PRK14558 195 SICKKYGITILVINFFEPGNLLKALKGENVGTLVVP 230 (231)
T ss_pred HHHHHCCCCEEEEeCCCCCHHHHHHCCCCCcEEeCC
Confidence 999999999999999999999999999999999865
No 159
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=99.96 E-value=1.4e-29 Score=262.61 Aligned_cols=236 Identities=27% Similarity=0.316 Sum_probs=175.4
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCccccc------ccCcccc
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFAD------LQKPQIE 86 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~------~~~~~~~ 86 (713)
++||||||+++.++. +++++|+.+++.|.++|||||||+++.+. ++.++... .+.+ .|.+..+
T Consensus 1 ~~ViK~GG~~l~~~~---------~~~~~i~~l~~~g~~~VlVHGgg~~i~~~-~~~~gi~~-~~~~~~~g~~~rvt~~~ 69 (268)
T PRK14058 1 MIVVKIGGSVGIDPE---------DALIDVASLWADGERVVLVHGGSDEVNEL-LERLGIEP-RFVTSPSGVTSRYTDRE 69 (268)
T ss_pred CEEEEEChHHhhCcH---------HHHHHHHHHHHCCCCEEEEeCCHHHHHHH-HHHcCCCc-eEEeCCCCCceEeCCHH
Confidence 589999999998753 67999999999999999999998777765 45554433 3332 4444432
Q ss_pred chHHHHHHcchHHHHHHHHHHhhhcCCcccee------eecc----------------cccCchhHHHHHH-HHHHHHHh
Q 005131 87 LDGKACAAVGQNSIMALYDTLFSELDLTSAQL------LVTD----------------NDFRDKEFRSQLS-ETVKSLLS 143 (713)
Q Consensus 87 l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~------~~~~----------------~~~~~~~~~~~~~-~~i~~~l~ 143 (713)
--.....++++. ...+.+.|.+.|+++..+ +++. -|+++.+.+..+. +.|+.+|+
T Consensus 70 ~l~~~~~a~~~l--n~~lv~~L~~~Gv~a~~l~~~~~~l~~~~~~~~~~~~~~g~~~~~d~g~~g~v~~v~~~~i~~ll~ 147 (268)
T PRK14058 70 TLEVFIMAMALI--NKQLVERLQSLGVNAVGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLLLK 147 (268)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHhCCCCccccCcccCCEEEEEEecccccccCCcceeccCCceeEEEEECHHHHHHHHH
Confidence 222233445522 222345677777665321 1110 1334444554454 99999999
Q ss_pred CCceeEEcCCCceecCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchh
Q 005131 144 LRVIPVFNENDAVSTRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGE 222 (713)
Q Consensus 144 ~g~vpV~~g~d~v~~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~ 222 (713)
.|.|||++| .++ ...+..+ +|+|++|+.+|.+|+|++|+|+|||||||++|| +++++|++|+++|++++
T Consensus 148 ~g~iPVi~~-~~~-------~~~g~~~~i~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p--~~~~~i~~i~~~e~~~l 217 (268)
T PRK14058 148 AGYLPVVAP-PAL-------SEEGEPLNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPP--DEGSLIERITPEEAEEL 217 (268)
T ss_pred CCCEEEEeC-ceE-------CCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhhccCCC--CCCcCccCcCHHHHHHH
Confidence 999999997 111 1123333 899999999999999999999999999999988 34789999999998887
Q ss_pred hhcCCCCccccCchHHHHHHHHHHHHcCCc-EEEEeCCCchhHHHHhcCCcceeEEec
Q 005131 223 ITFGDKSRVGRGGMTAKVKAAVNAAYAGIP-VVITSGYSDENILKVLQGERIGTLFHQ 279 (713)
Q Consensus 223 ~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~tge~iGT~i~~ 279 (713)
+. +++|+|.+|++++..+.++|++ ++|++++.|+++...+.|+ ||.+.+
T Consensus 218 ~~------~~tGgM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~l~~~l~G~--GT~I~~ 267 (268)
T PRK14058 218 SK------AAGGGMKKKVLMAAEAVEGGVGRVIIADANVDDPISAALAGE--GTVIVN 267 (268)
T ss_pred hh------ccCCccHHHHHHHHHHHHcCCCEEEEEcCCCcchHHHHhCCC--ceEEec
Confidence 54 5799999999999999999994 9999999999999998875 999864
No 160
>cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet
Probab=99.96 E-value=1.6e-29 Score=258.63 Aligned_cols=221 Identities=19% Similarity=0.258 Sum_probs=169.7
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhch-----HHHhhhhccCcccccccCccccc
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGR-----QRLRYRRLINSSFADLQKPQIEL 87 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~-----~~~~~~~~~~~~~~~~~~~~~~l 87 (713)
.+|||||||++++++ .+++++++|+.+.+.|++++|||||+++.|+ .+...... .+.+... -
T Consensus 1 ~~ViK~GGs~l~~~~------~~~~~~~~I~~~~~~g~~~vvV~sa~g~~G~~~~~~~l~~~~~~-----~~~~~t~--~ 67 (244)
T cd04260 1 IIVQKFGGTSVSTKE------RREQVAKKVKQAVDEGYKPVVVVSAMGRKGDPYATDTLINLVYA-----ENSDISP--R 67 (244)
T ss_pred CEEEEECchhcCCHH------HHHHHHHHHHHHHHCCCCeEEEEECCCCCCCchHHHHHHHHHHh-----hcCCCCH--H
Confidence 379999999999865 6899999999999999998888866555444 33222111 0122222 1
Q ss_pred hHHHHHHcchHHHHHHHHHHhhhcCCcccee------eecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCC
Q 005131 88 DGKACAAVGQNSIMALYDTLFSELDLTSAQL------LVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKA 161 (713)
Q Consensus 88 ~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~ 161 (713)
..+.+.++|+..+..++.+.|++.|+++..+ +++.+++........-.+.+..+++.|.|||++|+-+...
T Consensus 68 ~~~~~~~~Ge~~~~~~~~~~l~~~Gi~a~~l~~~~~~lit~~~~~~~~v~~~~~~~l~~ll~~g~VPVv~g~~~~~~--- 144 (244)
T cd04260 68 ELDLLMSCGEIISAVVLTSTLRAQGLKAVALTGAQAGILTDDNYSNAKIIKVNPKKILSALKEGDVVVVAGFQGVTE--- 144 (244)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhCCCCeEEechHHcCEEecCCCCceeeeccCHHHHHHHHhCCCEEEecCCcccCC---
Confidence 2456788999999988999999999998765 4566655432221111377999999999999997111111
Q ss_pred cccCCCCcc----cchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCch
Q 005131 162 PYEDSSGIF----WDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGM 236 (713)
Q Consensus 162 ~~~~~~g~~----~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m 236 (713)
.+..+ +++|++|+.||.+|+|++|+|+|||||||++|| .++++++|++|+++|+.+++.+| ...+
T Consensus 145 ----~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~~i~~~e~~~l~~~g------~~v~ 214 (244)
T cd04260 145 ----DGEVTTLGRGGSDTTAAALGAALNAEYVEIYTDVDGIMTADPRVVPNARILDVVSYNEVFQMAHQG------AKVI 214 (244)
T ss_pred ----CCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCcCCcCCCCCCCCCeEcccCCHHHHHHHHHcC------chhc
Confidence 12212 479999999999999999999999999999999 78999999999999999988765 5678
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCc
Q 005131 237 TAKVKAAVNAAYAGIPVVITSGYSD 261 (713)
Q Consensus 237 ~~Kl~aa~~a~~~gv~v~I~~g~~~ 261 (713)
|+ +++..+.++++|++|.|+++|
T Consensus 215 ~~--~a~~~~~~~~i~v~I~~~~~~ 237 (244)
T cd04260 215 HP--RAVEIAMQANIPIRIRSTMSE 237 (244)
T ss_pred CH--HHHHHHHHcCCeEEEecCCCC
Confidence 88 699999999999999999887
No 161
>cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and
Probab=99.96 E-value=4.5e-29 Score=254.97 Aligned_cols=221 Identities=20% Similarity=0.310 Sum_probs=171.0
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHH
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKAC 92 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 92 (713)
.+||||||+++.+. +.+++++++|+.+.+.|+++||||||++..++.+++...... .. . ..-..+.+
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l~~~g~~~vvV~sg~g~~~~~l~~~~~~~~---~~---~-~~~~~~~i 67 (239)
T cd04261 1 LIVQKFGGTSVASI------ERIKRVAERIKKRKKKGNQVVVVVSAMGGTTDELIELAKEIS---PR---P-PARELDVL 67 (239)
T ss_pred CEEEEECCcccCCH------HHHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHhc---cC---C-CHHHHHHH
Confidence 37999999999874 378999999999999999999999998788887765432211 00 0 11123467
Q ss_pred HHcchHHHHHHHHHHhhhcCCccce-----e-eecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCC
Q 005131 93 AAVGQNSIMALYDTLFSELDLTSAQ-----L-LVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDS 166 (713)
Q Consensus 93 ~~~g~~~~~~l~~~~l~~~gi~~~~-----~-~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~ 166 (713)
.+.|+.....++...|.++|+++.. . +++.+++..........+.++.++++|.|||++|+-.. ...
T Consensus 68 ~a~Ge~~~~~l~~~~l~~~g~~a~~l~~~~~~l~~~~~~~~~~i~~~~~~~l~~ll~~~~ipVi~G~~~~-------~~~ 140 (239)
T cd04261 68 LSTGEQVSIALLAMALNRLGIKAISLTGWQAGILTDGHHGKARIIDIDPDRIRELLEEGDVVIVAGFQGI-------NED 140 (239)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEechhhCCEEecCCCCcceechhhHHHHHHHHHcCCeEEEcCcccc-------CCC
Confidence 7888888888889999999987642 2 44555553332222223889999999999999972111 111
Q ss_pred CCc----ccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHH
Q 005131 167 SGI----FWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVK 241 (713)
Q Consensus 167 ~g~----~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~ 241 (713)
+.. +++||++|+.+|.+|+|++|+++|||||||++|| .+|++++|++|+++|+++++..| .+.|++ +
T Consensus 141 g~~~~l~rg~sD~~A~~lA~~l~A~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~~ea~~l~~~G------~~~~~~--~ 212 (239)
T cd04261 141 GDITTLGRGGSDTSAVALAAALGADRCEIYTDVDGVYTADPRIVPKARKLDEISYDEMLEMASLG------AKVLHP--R 212 (239)
T ss_pred CCEEecCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCCCCCCCCCCceEccccCHHHHHHHHhcc------ccccCH--H
Confidence 111 2589999999999999999999999999999999 78999999999999999987654 567777 6
Q ss_pred HHHHHHHcCCcEEEEeCCCc
Q 005131 242 AAVNAAYAGIPVVITSGYSD 261 (713)
Q Consensus 242 aa~~a~~~gv~v~I~~g~~~ 261 (713)
++.++.++|+|++|.|+++|
T Consensus 213 a~~~~~~~~i~i~I~n~~~~ 232 (239)
T cd04261 213 SVELAKKYGVPLRVLSSFSE 232 (239)
T ss_pred HHHHHHHcCCeEEEecCCCC
Confidence 99999999999999999988
No 162
>cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.96 E-value=3.6e-29 Score=260.16 Aligned_cols=243 Identities=21% Similarity=0.314 Sum_probs=182.6
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
.+++|||+||+++.+++ ++.++++|+.+.+.|.++||||||++++++.+.+ .+.......++|.+..+...-
T Consensus 18 ~~~~VIKlGG~ai~~~~-------l~~~~~~ia~l~~~g~~~ViVHGggp~i~~~~~~-~gi~~~~~~G~RvT~~~~l~~ 89 (280)
T cd04237 18 GKTFVIAFGGEAVAHPN-------FDNIVHDIALLHSLGIRLVLVHGARPQIDQRLAE-RGLEPRYHRGLRITDAAALEC 89 (280)
T ss_pred CCEEEEEEChHHhcCch-------HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHH-cCCCccccCCcCcCCHHHHHH
Confidence 46899999999998754 6799999999999999999999999999998643 333333445677766543332
Q ss_pred HHHHcchHHHH--HHHHHHhhhcCCccceee-------ec-------ccccCchhHHHHHH-HHHHHHHhCCceeEEcCC
Q 005131 91 ACAAVGQNSIM--ALYDTLFSELDLTSAQLL-------VT-------DNDFRDKEFRSQLS-ETVKSLLSLRVIPVFNEN 153 (713)
Q Consensus 91 ~~~~~g~~~~~--~l~~~~l~~~gi~~~~~~-------~~-------~~~~~~~~~~~~~~-~~i~~~l~~g~vpV~~g~ 153 (713)
...+.|+.... ..+...+...++....+. .. ..+++..|....++ +.|+.+|++|++||+++
T Consensus 90 ~~~~~g~v~~~l~~~l~~~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~G~v~~v~~~~i~~lL~~g~ipv~~~- 168 (280)
T cd04237 90 VKEAAGAVRLEIEALLSMGLPNSPMAGARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRIDADAIRRQLDQGSIVLLSP- 168 (280)
T ss_pred HHHHHHHHHHHHHHHHHhhccccCcCCCceEEecCeEEEEEECCcccCceEeeeccEEEEcHHHHHHHHHCCCEEEECC-
Confidence 33334555333 222333333333211111 11 12555566665555 99999999999999987
Q ss_pred CceecCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccc
Q 005131 154 DAVSTRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVG 232 (713)
Q Consensus 154 d~v~~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~ 232 (713)
.++...+..+ +|+|.+|+.||.+|+|++|+|+|||||||++ ++++|++|+.+|+++++..+. ..
T Consensus 169 -------~g~~~~g~~lnvnaD~~A~~LA~~L~a~klv~ltdv~GV~~~-----~~~~i~~i~~~e~~~l~~~~~---~~ 233 (280)
T cd04237 169 -------LGYSPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDD-----DGELIRELTAQEAEALLETGA---LL 233 (280)
T ss_pred -------ceECCCCCEEeeCHHHHHHHHHHHcCCCEEEEEeCCCcccCC-----CCCccccCCHHHHHHHHHcCC---CC
Confidence 2223344445 7999999999999999999999999999975 489999999999999988763 24
Q ss_pred cCchHHHHHHHHHHHHcCCc-EEEEeCCCchhHH-HHhcCCcceeEE
Q 005131 233 RGGMTAKVKAAVNAAYAGIP-VVITSGYSDENIL-KVLQGERIGTLF 277 (713)
Q Consensus 233 ~g~m~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~-~~~tge~iGT~i 277 (713)
+++|+||++++..++++|++ +||++++.|+++. ++++.+..||.+
T Consensus 234 ~ggM~~Kv~~a~~a~~~Gv~~v~I~~~~~~~~ll~elft~~g~GT~i 280 (280)
T cd04237 234 TNDTARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280 (280)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCCCcC
Confidence 89999999999999999996 9999999999985 889888889864
No 163
>PRK00358 pyrH uridylate kinase; Provisional
Probab=99.96 E-value=1.1e-28 Score=250.98 Aligned_cols=228 Identities=22% Similarity=0.311 Sum_probs=168.6
Q ss_pred ceEEEEeCccceecCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 12 KRIVVKVGTAVVTRSDG-RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 12 ~~iViKlGGs~l~~~~~-~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
+++|||||||+|+++.+ +++.+.+++++++|+.+++.|++++||||||. +.+.+... .. ++... .+ .
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~i~~~~~~g~~vvlV~gGG~-~a~~~~~~---~~----~~~~~--~~--~ 68 (231)
T PRK00358 1 KRVLLKLSGEALAGEKGFGIDPEVLDRIAEEIKEVVELGVEVAIVVGGGN-IFRGYIGA---AA----GMDRA--TA--D 68 (231)
T ss_pred CeEEEEeccceecCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHh---hc----CCChh--hH--H
Confidence 47999999999997543 68899999999999999999999999999863 33332110 00 11111 11 1
Q ss_pred HHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc
Q 005131 91 ACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF 170 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~ 170 (713)
....++......++...|.+.|+++. ++ +........... ..+.+..+|++|.|||++| . .+..+
T Consensus 69 ~~~~~~~~l~~~ll~~~l~~~Gi~a~-~~-~~~~~~~~~~~~-~~~~~~~~l~~g~vPVv~g-----~-------~~~~~ 133 (231)
T PRK00358 69 YMGMLATVMNALALQDALERAGVDTR-VQ-SAIPMPQVAEPY-IRRRAIRHLEKGRVVIFAA-----G-------TGNPF 133 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeE-Ee-chhhcccccCcc-cHHHHHHHHHCCCEEEEEC-----C-------CCCCC
Confidence 22233334444467888999999876 21 111111111111 1255779999999999975 1 11224
Q ss_pred cchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHc
Q 005131 171 WDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYA 249 (713)
Q Consensus 171 ~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~ 249 (713)
+++|++|+++|.+|+|++|+|+|||||||++|| .+|++++|++|+++|+.++ ++..|++ +++..+.++
T Consensus 134 ~ssD~~A~~lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~---------g~~~~d~--~a~~~a~~~ 202 (231)
T PRK00358 134 FTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEK---------GLKVMDA--TAISLARDN 202 (231)
T ss_pred CCchHHHHHHHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHc---------CCcchhH--HHHHHHHHc
Confidence 788999999999999999999999999999999 7899999999999886553 2445666 788889999
Q ss_pred CCcEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 250 GIPVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 250 gv~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
|++++|+|+++|+++.+++.|+..||++
T Consensus 203 ~i~v~I~~g~~~~~l~~~l~g~~~GT~i 230 (231)
T PRK00358 203 KIPIIVFNMNKPGNLKRVVKGEHIGTLV 230 (231)
T ss_pred CCcEEEECCCCchHHHHHHCCCCCCEEe
Confidence 9999999999999999999999999987
No 164
>PRK14556 pyrH uridylate kinase; Provisional
Probab=99.96 E-value=1.7e-28 Score=245.79 Aligned_cols=232 Identities=18% Similarity=0.226 Sum_probs=182.2
Q ss_pred hhhhhccceEEEEeCccceecCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCc
Q 005131 5 RAFVKDVKRIVVKVGTAVVTRSDG-RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKP 83 (713)
Q Consensus 5 ~~~~~~~~~iViKlGGs~l~~~~~-~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~ 83 (713)
+..|.+++++|+|+||++|..+++ .+|.+.+++++++|+.+.+.|+++.||+|||.-+. +....
T Consensus 9 ~~~~~~~~rvllKlsGe~l~~~~~~~~d~~~~~~~a~~i~~~~~~g~~i~iVvGGGni~R---------------g~~~~ 73 (249)
T PRK14556 9 SQKLPKLKRILLKLSGESLSADQGFGINVESAQPIINQIKTLTNFGVELALVVGGGNILR---------------GGRAN 73 (249)
T ss_pred chhhhhhCEEEEEEehhhCcCCCCCCcCHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHh---------------Cchhh
Confidence 344566899999999999997654 69999999999999999999999999999985332 22222
Q ss_pred -cccchHHHHHHcchHHHH--H-HHHHHhhhcCCccc-eeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceec
Q 005131 84 -QIELDGKACAAVGQNSIM--A-LYDTLFSELDLTSA-QLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVST 158 (713)
Q Consensus 84 -~~~l~~~~~~~~g~~~~~--~-l~~~~l~~~gi~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~ 158 (713)
..++++.....+|+.... + ++..+|.+.|+++. +..+....+.+... .+.+...+++|.|+|+.| +
T Consensus 74 ~~~~~~r~~~D~~GmlaT~iNal~l~~~l~~~~~~~~v~sa~~~~~~~e~~~----~~~~~~~l~~g~vvi~~g-----g 144 (249)
T PRK14556 74 FGNKIRRATADSMGMIATMINALALRDMLISEGVDAEVFSAKGVDGLLKVAS----AHEFNQELAKGRVLIFAG-----G 144 (249)
T ss_pred ccCCCchhhhhHHHHHHHHHHHHHHHHHHHHcCCCeEEeeccccCcCCCCCC----HHHHHHHHhCCCEEEEEC-----C
Confidence 123555556666666433 3 56778899999875 22333344444332 244667789999999876 2
Q ss_pred CCCcccCCCCcccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchH
Q 005131 159 RKAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMT 237 (713)
Q Consensus 159 ~~~~~~~~~g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~ 237 (713)
.+.+++++|++|+++|.+++||.|+++||||||||+|| .+|+|++|++|+++|+.+. ....|+
T Consensus 145 -------~G~p~~StD~lAallA~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~---------~l~vmd 208 (249)
T PRK14556 145 -------TGNPFVTTDTTASLRAVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSK---------ELNVMD 208 (249)
T ss_pred -------CCCCcCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhccc---------chHhHH
Confidence 22445788999999999999999999999999999999 8999999999999887651 235677
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEe
Q 005131 238 AKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFH 278 (713)
Q Consensus 238 ~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~ 278 (713)
. .++..+.++|+|++|+++++|+++.+++.|+..||++.
T Consensus 209 ~--~A~~~a~~~gIpi~I~ng~~~~~L~~~l~Ge~~GT~i~ 247 (249)
T PRK14556 209 L--GAFTQCRDFGIPIYVFDLTQPNALVDAVLDSKYGTWVT 247 (249)
T ss_pred H--HHHHHHHHCCCcEEEECCCCchHHHHHHcCCCCceEEE
Confidence 6 68999999999999999999999999999999999985
No 165
>PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed
Probab=99.96 E-value=3.9e-28 Score=250.35 Aligned_cols=251 Identities=25% Similarity=0.357 Sum_probs=185.0
Q ss_pred ccceEEEEeCccceecCCC----cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccc
Q 005131 10 DVKRIVVKVGTAVVTRSDG----RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQI 85 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~----~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~ 85 (713)
||+++||+|||++|..+.+ ..+.+.++..+++|+.+.+.|++++|+||+|+|+|..+++...... .....+
T Consensus 1 ~~~~ivvalgGnAl~~~~~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGpQVG~i~~~~~~~~~-----~~~~~~ 75 (313)
T PRK12454 1 MKKRIVIALGGNALLQPGEKGTAENQMKNVRKTAKQIADLIEEGYEVVITHGNGPQVGNLLLQMDAAKD-----VGIPPF 75 (313)
T ss_pred CCceEEEEeChHHhCCCCCCCcchHHHHHHHHHHHHHHHHHHcCCEEEEEECCChHHHHHHHHHHHhcc-----cCCCCC
Confidence 5689999999999988654 2333589999999999999999999999999999998765433221 112334
Q ss_pred cchHHHHHHcchHHHH--HHHHHHhhhcCCccc------eeeecccccC------------c------------------
Q 005131 86 ELDGKACAAVGQNSIM--ALYDTLFSELDLTSA------QLLVTDNDFR------------D------------------ 127 (713)
Q Consensus 86 ~l~~~~~~~~g~~~~~--~l~~~~l~~~gi~~~------~~~~~~~~~~------------~------------------ 127 (713)
.|+.-.+.+.|+++.. ..+.+.|.+.|+... +..+..+|.. .
T Consensus 76 pld~~~a~sqG~igy~l~~al~~~l~~~g~~~~v~t~~tq~~Vd~~Dpaf~~PtKpiG~~y~~~~a~~~~~~~g~~~~~d 155 (313)
T PRK12454 76 PLDVAGAMTQGWIGYMIQQALRNELAKRGIEKQVATIVTQVIVDKNDPAFQNPTKPVGPFYDEEEAKKLAKEKGWIVKED 155 (313)
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEECCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEc
Confidence 4555555566666544 335667788887552 2233222211 1
Q ss_pred --hhHHH---------HH-HHHHHHHHhCCceeEEcCCCceecCCCcccCCCCc------ccchhHHHHHHHhhhCCCEE
Q 005131 128 --KEFRS---------QL-SETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGI------FWDNDSLAALLALELKADLL 189 (713)
Q Consensus 128 --~~~~~---------~~-~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~------~~~sD~~A~~lA~~l~Ad~l 189 (713)
.++++ -+ .+.|+.+|+.|.|||++|+. |.|..+..+. ++|+|.+|+.||.+|+||+|
T Consensus 156 ~g~g~RrvV~SP~P~~ive~~aI~~LLe~G~IvI~~GgG-----GiPV~~~~g~~~gveaViD~D~aAa~LA~~L~AD~L 230 (313)
T PRK12454 156 AGRGWRRVVPSPDPLGIVEIEVIKALVENGFIVIASGGG-----GIPVIEEDGELKGVEAVIDKDLASELLAEELNADIF 230 (313)
T ss_pred CCCceEEEeCCCCCccccCHHHHHHHHHCCCEEEEeCCC-----ccceEcCCCcEEeeeeecCccHHHHHHHHHcCCCEE
Confidence 11111 11 48899999999999999732 2332222222 26889999999999999999
Q ss_pred EEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCC-cEEEEeCCCchhHHHHh
Q 005131 190 ILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGI-PVVITSGYSDENILKVL 268 (713)
Q Consensus 190 i~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv-~v~I~~g~~~~~l~~~~ 268 (713)
+|+|||||||++ |.+|++++|++|+.+|+++++..+ .+.+|+|.||++++..+++.|. +++|++ ++.+.+++
T Consensus 231 IiLTdVdGVy~~-~~~p~~~~i~~It~~e~~~~i~~g---~~~~GgM~pKv~AA~~~v~~gg~~a~I~~---~~~i~~aL 303 (313)
T PRK12454 231 IILTDVEKVYLN-YGKPDQKPLDKVTVEEAKKYYEEG---HFKAGSMGPKILAAIRFVENGGKRAIIAS---LEKAVEAL 303 (313)
T ss_pred EEEeCCceeeCC-CCCCCCeEccccCHHHHHHHHhcC---CcCCCChHHHHHHHHHHHHcCCCeEEECc---hHHHHHHH
Confidence 999999999987 456789999999999999988654 3778999999999999888764 599986 88899999
Q ss_pred cCCcceeEEe
Q 005131 269 QGERIGTLFH 278 (713)
Q Consensus 269 tge~iGT~i~ 278 (713)
.|+ .||.|.
T Consensus 304 ~G~-~GT~I~ 312 (313)
T PRK12454 304 EGK-TGTRII 312 (313)
T ss_pred CCC-CCeEeC
Confidence 988 699885
No 166
>PRK12686 carbamate kinase; Reviewed
Probab=99.96 E-value=2e-28 Score=253.24 Aligned_cols=251 Identities=21% Similarity=0.322 Sum_probs=181.5
Q ss_pred ccceEEEEeCccceecCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccc
Q 005131 10 DVKRIVVKVGTAVVTRSDG--RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIEL 87 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~--~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 87 (713)
||+++|||+||+++.++.. +.+...++.+++.|+.+.+.|+++||+||+|||+|..+++.....+ . ....+.|
T Consensus 1 ~~~~iVialGGnAl~~~~~~~~~q~~~~~~~a~~ia~l~~~g~~~vi~HGnGPQVg~~~~~~~~~~~-~----~~~~~pl 75 (312)
T PRK12686 1 MKEKIVIALGGNAILQTEATAEAQQTAVREAAQHLVDLIEAGHDIVITHGNGPQVGNLLLQQAESNS-N----KVPAMPL 75 (312)
T ss_pred CCCEEEEEcChHhhCCCCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHhccc-c----CCCCCCh
Confidence 6789999999999998652 4556688999999999999999999999999999987665433322 1 1222344
Q ss_pred hHHHHHHcchHHHH--HHHHHHhhhcCCcc------ceeeecccccC--------------------------------c
Q 005131 88 DGKACAAVGQNSIM--ALYDTLFSELDLTS------AQLLVTDNDFR--------------------------------D 127 (713)
Q Consensus 88 ~~~~~~~~g~~~~~--~l~~~~l~~~gi~~------~~~~~~~~~~~--------------------------------~ 127 (713)
+.-.+.+-|..+.+ ..+.+.|.+.++.- .+.++..+|.. .
T Consensus 76 ~~~~a~sqg~iGy~~~q~l~~~l~~r~~~~~v~~vvtqv~Vd~~d~af~~ptk~ig~~~~~~~a~~~~~~~g~~~~~d~~ 155 (312)
T PRK12686 76 DTCVAMSQGMIGYWLQNALNNELTERGIDKPVITLVTQVEVDKDDPAFANPTKPIGPFYTEEEAKQQAEQPGSTFKEDAG 155 (312)
T ss_pred hhhhhhccchhhHHHHHHHHHHHHhcCCCCCceEEEEEEEECCCChhhcCCCCCccCccCHHHHHHHHHHcCCcccccCC
Confidence 44445555555543 22455566555432 12232221100 0
Q ss_pred hhHHHH---------H-HHHHHHHHhCCceeEEcCCCceecCCCcccC-CC---Cc--ccchhHHHHHHHhhhCCCEEEE
Q 005131 128 KEFRSQ---------L-SETVKSLLSLRVIPVFNENDAVSTRKAPYED-SS---GI--FWDNDSLAALLALELKADLLIL 191 (713)
Q Consensus 128 ~~~~~~---------~-~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~-~~---g~--~~~sD~~A~~lA~~l~Ad~li~ 191 (713)
.++++. + .+.|+.||++|+|||.+|+. +.|-.. .+ +. ++|+|.+|+.||.+|+||+|+|
T Consensus 156 ~G~rrvV~sP~P~~ive~~~I~~Ll~~G~IpI~~Ggg-----gIPVv~~~~~~~gv~avid~D~~Aa~LA~~L~Ad~LIi 230 (312)
T PRK12686 156 RGYRRVVPSPKPQEIIEHDTIRTLVDGGNIVIACGGG-----GIPVIRDDNTLKGVEAVIDKDFASEKLAEQIDADLLII 230 (312)
T ss_pred CCeEEeeCCCCCccccCHHHHHHHHHCCCEEEEeCCC-----CCCeEecCCcEEeeecccCccHHHHHHHHHcCCCEEEE
Confidence 122221 2 38999999999999988632 212111 11 11 4899999999999999999999
Q ss_pred eecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHc--CCcEEEEeCCCchhHHHHhc
Q 005131 192 LSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYA--GIPVVITSGYSDENILKVLQ 269 (713)
Q Consensus 192 ~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~--gv~v~I~~g~~~~~l~~~~t 269 (713)
+|||||||++ |.+|++++|++|+.+|+++++..+ .+.+|||.||+++|..+.+. |.+++|++ ++.+.+++.
T Consensus 231 LTDVdGVy~~-~~~p~ak~I~~I~~~e~~~li~~g---~~~tGGM~pKveAA~~av~~g~g~~viI~~---~~~i~~aL~ 303 (312)
T PRK12686 231 LTGVENVFIN-FNKPNQQKLDDITVAEAKQYIAEG---QFAPGSMLPKVEAAIDFVESGEGKKAIITS---LEQAKEALA 303 (312)
T ss_pred EeCchhhccC-CCCCCCeECCccCHHHHHHHhhCC---CccCCCcHHHHHHHHHHHHhCCCCEEEEeC---chHHHHHhC
Confidence 9999999995 556889999999999999988754 37789999999999999975 45688997 888889999
Q ss_pred CCcceeEEe
Q 005131 270 GERIGTLFH 278 (713)
Q Consensus 270 ge~iGT~i~ 278 (713)
|+ .||.+.
T Consensus 304 G~-~GT~I~ 311 (312)
T PRK12686 304 GN-AGTHIT 311 (312)
T ss_pred CC-CCeEEe
Confidence 88 699874
No 167
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=99.96 E-value=2.3e-28 Score=248.17 Aligned_cols=227 Identities=22% Similarity=0.281 Sum_probs=173.0
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHH
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKAC 92 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 92 (713)
++|||||||++++++++++.+.+++++++|+++.+.|++++||||||..+++.....+.. ... . ....
T Consensus 1 ~iViKiGGs~l~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvvV~ggG~~a~~~~~~~~~~--------~~~--~--~~~~ 68 (229)
T cd04239 1 RIVLKLSGEALAGEGGGIDPEVLKEIAREIKEVVDLGVEVAIVVGGGNIARGYIAAARGM--------PRA--T--ADYI 68 (229)
T ss_pred CEEEEECcceecCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCChHHhhHHHhhcCC--------Chh--h--HHHH
Confidence 589999999999987788999999999999999999999999999876556643221111 100 1 1233
Q ss_pred HHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcccc
Q 005131 93 AAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIFWD 172 (713)
Q Consensus 93 ~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~~~ 172 (713)
...++.....++...|.+.|+++..+... +........+ .+.+..+++.|.|||++|+. +.++++
T Consensus 69 ~~~~~~l~~~l~~~~l~~~Gi~a~~~~~~--~~~~~~~~~~-~~~l~~~l~~g~ipVi~g~~------------g~~~~~ 133 (229)
T cd04239 69 GMLATVMNALALQDALEKLGVKTRVMSAI--PMQGVAEPYI-RRRAIRHLEKGRIVIFGGGT------------GNPGFT 133 (229)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEeCHH--HHhhhhcccc-HHHHHHHHhCCCEEEEeCcc------------CCCCCC
Confidence 44444555556678888899987653211 1111100011 36699999999999999711 122467
Q ss_pred hhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCC
Q 005131 173 NDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGI 251 (713)
Q Consensus 173 sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv 251 (713)
||++|+++|..|+|++|+|+|||||||++|| .+|++++|++|+++|+.++.. ..|++ .++..+.++|+
T Consensus 134 sD~~A~~lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~---------~~~~~--~a~~~~~~~~i 202 (229)
T cd04239 134 TDTAAALRAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGL---------KVMDA--TALTLCRRNKI 202 (229)
T ss_pred cHHHHHHHHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhc---------CCccH--HHHHHHHHCCC
Confidence 8999999999999999999999999999999 889999999999988876531 45555 68888999999
Q ss_pred cEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 252 PVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 252 ~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
+++|++++.|+++.+++.|+..||.+
T Consensus 203 ~v~I~~g~~~~~l~~~l~g~~~GT~i 228 (229)
T cd04239 203 PIIVFNGLKPGNLLRALKGEHVGTLI 228 (229)
T ss_pred eEEEECCCChhHHHHHHcCCCCCeEe
Confidence 99999999999999999999889986
No 168
>cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP. Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK).
Probab=99.96 E-value=3.2e-28 Score=251.62 Aligned_cols=246 Identities=27% Similarity=0.369 Sum_probs=183.7
Q ss_pred eEEEEeCccceecCCC----cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccch
Q 005131 13 RIVVKVGTAVVTRSDG----RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELD 88 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~----~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (713)
++||||||++|..+.+ ..+.+.++..+++|+.+.+.|++++||||+|||+|+.+.......+ ....+.|+
T Consensus 1 rivialgGnal~~~~~~~~~~~q~~~~~~~a~~i~~l~~~g~~vvi~hGnGPqvG~i~~~~~~~~~------~~~~~pld 74 (308)
T cd04235 1 RIVVALGGNALLRRGEPGTAEEQRENVKIAAKALADLIKNGHEVVITHGNGPQVGNLLLQNEAAAE------KVPAYPLD 74 (308)
T ss_pred CEEEEecHHHhCCCCCCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhccc------cCCCCCcc
Confidence 5899999999987553 6888999999999999999999999999999999998765432211 12223444
Q ss_pred HHHHHHcchHHHH--HHHHHHhhhcCCccc------eeeeccccc------------Cc--------------------h
Q 005131 89 GKACAAVGQNSIM--ALYDTLFSELDLTSA------QLLVTDNDF------------RD--------------------K 128 (713)
Q Consensus 89 ~~~~~~~g~~~~~--~l~~~~l~~~gi~~~------~~~~~~~~~------------~~--------------------~ 128 (713)
.-.+.+.|+++.. ..+.+.|.+.|++.. +..+..+|. .. .
T Consensus 75 ~~~a~~~G~ig~~~~~al~~~l~~~~~~~~v~t~~t~~~V~~~dpaf~~ptKpiG~~y~~~~a~~~~~~~g~~~~~d~~~ 154 (308)
T cd04235 75 VCGAMSQGMIGYMLQQALDNELPKRGIDKPVVTLVTQVVVDANDPAFKNPTKPIGPFYSEEEAEELAAEKGWTFKEDAGR 154 (308)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHcCCCCceEEEEeEEEEcCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEeCCC
Confidence 4455556665433 346667788777552 222322111 11 1
Q ss_pred hHHH--------HH--HHHHHHHHhCCceeEEcCCCceecCCCcccCCCCc------ccchhHHHHHHHhhhCCCEEEEe
Q 005131 129 EFRS--------QL--SETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGI------FWDNDSLAALLALELKADLLILL 192 (713)
Q Consensus 129 ~~~~--------~~--~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~------~~~sD~~A~~lA~~l~Ad~li~~ 192 (713)
++++ ++ .+.|+.+|++|+|||++| ++|.|...+.+. ++|+|++|+++|.+|+||+|+|+
T Consensus 155 g~rrvV~SP~P~~iv~~~~I~~Ll~~g~IpI~~G-----ggGiPv~~~~~~~~gveaVid~D~~AallA~~l~Ad~Liil 229 (308)
T cd04235 155 GYRRVVPSPKPKDIVEIEAIKTLVDNGVIVIAAG-----GGGIPVVREGGGLKGVEAVIDKDLASALLAEEINADLLVIL 229 (308)
T ss_pred CceeeeCCCCCccccCHHHHHHHHHCCCEEEEEC-----CCccCEEEcCCceeeeeeccCccHHHHHHHHHcCCCEEEEE
Confidence 1221 11 378999999999999997 334443322222 37889999999999999999999
Q ss_pred ecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcC-CcEEEEeCCCchhHHHHhcCC
Q 005131 193 SDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAG-IPVVITSGYSDENILKVLQGE 271 (713)
Q Consensus 193 TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~g-v~v~I~~g~~~~~l~~~~tge 271 (713)
|||||||+++ .+|++++|++|+++|+.+++..+ .+.+|+|.||++++..+++.+ .+++|++ ++.+.+++.|+
T Consensus 230 TdVdGVy~~~-~~pda~~i~~Is~~e~~~l~~~g---~~~tGGM~pKv~aA~~~a~~gg~~v~I~~---~~~i~~aL~G~ 302 (308)
T cd04235 230 TDVDNVYINF-GKPNQKALEQVTVEELEKYIEEG---QFAPGSMGPKVEAAIRFVESGGKKAIITS---LENAEAALEGK 302 (308)
T ss_pred ecCCeEECCC-CCCCCeEcCCcCHHHHHHHHhcC---ccccCCcHHHHHHHHHHHHhCCCeEEECC---HHHHHHHHCCC
Confidence 9999999965 46889999999999999887654 478999999999999988865 5688987 88899999988
Q ss_pred cceeEE
Q 005131 272 RIGTLF 277 (713)
Q Consensus 272 ~iGT~i 277 (713)
.||.+
T Consensus 303 -~GT~I 307 (308)
T cd04235 303 -AGTVI 307 (308)
T ss_pred -CCeEE
Confidence 69976
No 169
>PRK12352 putative carbamate kinase; Reviewed
Probab=99.96 E-value=5.6e-28 Score=251.85 Aligned_cols=258 Identities=19% Similarity=0.235 Sum_probs=183.6
Q ss_pred ccceEEEEeCccceecCCC--cc--cHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccc
Q 005131 10 DVKRIVVKVGTAVVTRSDG--RL--ALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQI 85 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~--~~--~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~ 85 (713)
|.+++||||||+++.++.. +. +...++.++++|+.+++.|+++|||||||++++..+.+.... +.+.++|.+..
T Consensus 1 m~k~iVI~lGGnAl~~~~~~~~~~~~~~~~~~~a~dia~l~~~G~~lVivHG~GPqI~~~l~~~~~~--~~~~g~rvt~~ 78 (316)
T PRK12352 1 MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIA--HEREGLPLTPL 78 (316)
T ss_pred CCcEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHcCcc--cccCCCCCCCH
Confidence 3479999999999977542 22 335789999999999999999999999999999986553322 23456676654
Q ss_pred cchHHHHHHcchHH--HHHHHHHHhhhcCCccc-----eeeecc--c--------------------------ccCc---
Q 005131 86 ELDGKACAAVGQNS--IMALYDTLFSELDLTSA-----QLLVTD--N--------------------------DFRD--- 127 (713)
Q Consensus 86 ~l~~~~~~~~g~~~--~~~l~~~~l~~~gi~~~-----~~~~~~--~--------------------------~~~~--- 127 (713)
. .....+.|..+ +...+...|.+.|.... ++.+.. . |+..
T Consensus 79 ~--~~v~~~~g~i~~~i~~~L~~~l~~~g~~~~~~vvt~v~vs~~D~~f~~~~kpiG~~y~~~~a~~~~~~~~~~~~~~d 156 (316)
T PRK12352 79 A--NCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRFVED 156 (316)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEECCCCccccCCcccccCcccHHHHHHHhhhcCCceEeec
Confidence 3 22333443332 22345666777663321 111111 1 1111
Q ss_pred hhH-----------HHHHH-HHHHHHHhCCceeEEcCCCceecCCCc-ccCCCCcc-cchhHHHHHHHhhhCCCEEEEee
Q 005131 128 KEF-----------RSQLS-ETVKSLLSLRVIPVFNENDAVSTRKAP-YEDSSGIF-WDNDSLAALLALELKADLLILLS 193 (713)
Q Consensus 128 ~~~-----------~~~~~-~~i~~~l~~g~vpV~~g~d~v~~~~~~-~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~T 193 (713)
.+. .+.++ +.|+.+|++|+|||.+||..|....-. +...+..+ +|+|++|+.+|.+|+||+|+|+|
T Consensus 157 ~g~G~rrvv~sp~pv~~V~~~~I~~ll~~g~iVi~~ggggiPv~~~~~g~~~n~~~nInaD~aAa~iA~aL~AdkLI~LT 236 (316)
T PRK12352 157 AGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITT 236 (316)
T ss_pred CCCCeEEecCCCCCceEEcHHHHHHHHHCCCEEEecCCCCCCEEeCCCCCccCceeeecHHHHHHHHHHHhCCCEEEEEe
Confidence 111 33444 999999999999888753333221100 01111123 88999999999999999999999
Q ss_pred cCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCc-EEEEeCCCchhHHHHhcCCc
Q 005131 194 DVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIP-VVITSGYSDENILKVLQGER 272 (713)
Q Consensus 194 dV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~tge~ 272 (713)
||+|||+++| +|++++|++++.+|++++++.+. +..|+|.||+++|..+++.|+. ++|++ ++.+.++++|+
T Consensus 237 DV~GV~~d~~-~~~~~li~~lt~~e~~~li~~g~---i~~GgM~pKl~aA~~al~~Gv~~v~I~~---~~~i~~al~g~- 308 (316)
T PRK12352 237 GVEKVCIHFG-KPQQQALDRVDIATMTRYMQEGH---FPPGSMLPKIIASLTFLEQGGKEVIITT---PECLPAALRGE- 308 (316)
T ss_pred CchhhccCCC-CCCcccccccCHHHHHHHHhcCC---cCCCCCHHHHHHHHHHHHhCCCeEEEcc---hHHHHHHHcCC-
Confidence 9999998764 46788999999999999987652 4468999999999999999887 99997 88899999998
Q ss_pred ceeEEec
Q 005131 273 IGTLFHQ 279 (713)
Q Consensus 273 iGT~i~~ 279 (713)
.||.+..
T Consensus 309 ~GT~I~~ 315 (316)
T PRK12352 309 TGTHIIK 315 (316)
T ss_pred CCeEEEe
Confidence 7898864
No 170
>TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases.
Probab=99.96 E-value=2.1e-28 Score=269.58 Aligned_cols=234 Identities=24% Similarity=0.328 Sum_probs=183.1
Q ss_pred ceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhh-ccCcccccccCccccchHH
Q 005131 12 KRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRR-LINSSFADLQKPQIELDGK 90 (713)
Q Consensus 12 ~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 90 (713)
+++|+|||||++.+.+ .+++++++|+.+++.|++++|||||++.+++.+.+... ..+ . +. .....+
T Consensus 1 ~~iViK~GGs~~~~~~------~i~~~~~~i~~~~~~g~~~vvV~sg~~~~t~~l~~~~~~~~~----~-~~--~~~~~~ 67 (401)
T TIGR00656 1 ELIVQKFGGTSVGSGE------RIKNAARIVLKEKKEGHKVVVVVSAMSGVTDALVEISEKAIR----D-AI--TPRERD 67 (401)
T ss_pred CcEEEEECCcCcCCHH------HHHHHHHHHHHHHHcCCCEEEEEeCCCCChHHHHHHHHHHhc----c-CC--ChHHHH
Confidence 3589999999999854 79999999999999999999999999999998766542 110 0 01 112245
Q ss_pred HHHHcchHHHHHHHHHHhhhcCCcccee------eecccccCchhHHHHHH-HHHHHHHhCCceeEEcCCCceecCCCcc
Q 005131 91 ACAAVGQNSIMALYDTLFSELDLTSAQL------LVTDNDFRDKEFRSQLS-ETVKSLLSLRVIPVFNENDAVSTRKAPY 163 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~~-~~i~~~l~~g~vpV~~g~d~v~~~~~~~ 163 (713)
.+.++|+..+..++...|++.|+++..+ +++...+.+........ +.+..+++.|.|||++|+-.... .+.
T Consensus 68 ~i~~~Ge~~s~~~~~~~l~~~g~~a~~l~~~~~~~~t~~~~~~~~~~~~~~~~~l~~~l~~~~vpVi~g~~~~~~--~g~ 145 (401)
T TIGR00656 68 ELVSHGERLSSALFSGALRDLGVKAIWLDGGEAGIITDDNFGNAKIDIIATEERLLPLLEEGIIVVVAGFQGATE--KGY 145 (401)
T ss_pred HHhhHHHHHHHHHHHHHHHhCCCceEEeccccceEEeCCCCCceEeeecchHHHHHHHHhCCCEEEecCcceeCC--CCC
Confidence 7788899888888999999999998755 44555444333222223 78999999999999997211111 111
Q ss_pred cCCCCcccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHH
Q 005131 164 EDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKA 242 (713)
Q Consensus 164 ~~~~g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~a 242 (713)
.+.- ..++||++|+.+|.+|+|++|+|||||||||++|| .+|++++|++|+++|+.+++.+| ...||| ++
T Consensus 146 ~~~l-grg~sD~~A~~lA~~l~A~~l~i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea~~l~~~G------~~v~~~--~a 216 (401)
T TIGR00656 146 TTTL-GRGGSDYTAALLAAALKADRVDIYTDVPGVYTTDPRVVEAAKRIDKISYEEALELATFG------AKVLHP--RT 216 (401)
T ss_pred Eeec-CCCcHHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCcEECCccCHHHHHHHHHcC------CcccCH--HH
Confidence 1110 01589999999999999999999999999999999 88999999999999999998865 689999 69
Q ss_pred HHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEec
Q 005131 243 AVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQ 279 (713)
Q Consensus 243 a~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~ 279 (713)
+.++.++++|++|.|+++|+ .||+|..
T Consensus 217 ~~~a~~~~i~i~i~~~~~~~----------~gT~I~~ 243 (401)
T TIGR00656 217 VEPAMRSGVPIEVRSSFDPE----------EGTLITN 243 (401)
T ss_pred HHHHHHCCCeEEEEECCCCC----------CCeEEEe
Confidence 99999999999999999883 3898865
No 171
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=99.96 E-value=6.8e-28 Score=233.81 Aligned_cols=228 Identities=23% Similarity=0.293 Sum_probs=179.3
Q ss_pred hccceEEEEeCccceecCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccc
Q 005131 9 KDVKRIVVKVGTAVVTRSDG-RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIEL 87 (713)
Q Consensus 9 ~~~~~iViKlGGs~l~~~~~-~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 87 (713)
++++++|+|+||++|..+++ .+|.+.+++++++|+++.+.|.++.||.|||.-+....... .++
T Consensus 3 ~~~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~g~eV~iVvGGGni~Rg~~~~~---------------~g~ 67 (238)
T COG0528 3 PKYMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDLGVEVAVVVGGGNIARGYIGAA---------------AGM 67 (238)
T ss_pred cceEEEEEEeecceecCCCCCCCCHHHHHHHHHHHHHHHhcCcEEEEEECCCHHHHhHHHHH---------------cCC
Confidence 46899999999999998765 69999999999999999999999999999986444332111 123
Q ss_pred hHHHHHHcchHH--HH-HHHHHHhhhcCCccc-eeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcc
Q 005131 88 DGKACAAVGQNS--IM-ALYDTLFSELDLTSA-QLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPY 163 (713)
Q Consensus 88 ~~~~~~~~g~~~--~~-~l~~~~l~~~gi~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~ 163 (713)
++.....+|+.. +. .++..+|.+.|++++ +..+..........+ +...+.+++|.|+|+.| +
T Consensus 68 ~r~~~D~mGmlaTvmNal~L~~aL~~~~~~~~v~sai~~~~~~e~~~~----~~A~~~l~~grVvIf~g-----G----- 133 (238)
T COG0528 68 DRVTADYMGMLATVMNALALQDALERLGVDTRVQSAIAMPQVAEPYSR----REAIRHLEKGRVVIFGG-----G----- 133 (238)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhcCCcceecccccCccccCccCH----HHHHHHHHcCCEEEEeC-----C-----
Confidence 343444555442 22 246777888898876 222222222222222 34667789999999986 3
Q ss_pred cCCCCcccchhHHHHHHHhhhCCCEEEEeec-CCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHH
Q 005131 164 EDSSGIFWDNDSLAALLALELKADLLILLSD-VEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVK 241 (713)
Q Consensus 164 ~~~~g~~~~sD~~A~~lA~~l~Ad~li~~Td-V~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~ 241 (713)
++.++.++|++|+++|.+++||.|+..|+ |||||++|| ++|+|+++++|||+|+.+. .-..|++ .
T Consensus 134 --tg~P~fTTDt~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~~---------~l~vmD~--t 200 (238)
T COG0528 134 --TGNPGFTTDTAAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYDEVLKI---------GLKVMDP--T 200 (238)
T ss_pred --CCCCCCchHHHHHHHHHHhCCcEEEEeccCCCceeCCCCCCCCCceecccCCHHHHHHh---------cCeeecH--H
Confidence 45566888999999999999999999995 999999999 9999999999999998773 4789999 6
Q ss_pred HHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEe
Q 005131 242 AAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFH 278 (713)
Q Consensus 242 aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~ 278 (713)
|+..++++++|++|+|+..++++..++.|+..||.+.
T Consensus 201 A~~l~~~~~i~i~Vfn~~~~~~l~~~~~ge~~gT~V~ 237 (238)
T COG0528 201 AFSLARDNGIPIIVFNINKPGNLKRALKGEEVGTIVE 237 (238)
T ss_pred HHHHHHHcCCcEEEEeCCCCccHHHHHcCCCCceEec
Confidence 8888999999999999999999999999999999875
No 172
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be
Probab=99.96 E-value=9e-28 Score=243.82 Aligned_cols=227 Identities=20% Similarity=0.293 Sum_probs=170.0
Q ss_pred ceEEEEeCccceecCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 12 KRIVVKVGTAVVTRSDG-RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 12 ~~iViKlGGs~l~~~~~-~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
+++|||||||++++++. +++.+.+++++++|+++.+.|+++|||||||..+.......+. ..+.. .+
T Consensus 1 ~~iViKlGGs~itdk~~~~~~~~~i~~~a~~i~~~~~~~~~~viVhGgG~~~~~~~~~~~~-------~~~~~-----~d 68 (231)
T cd04254 1 KRVLLKLSGEALAGENGFGIDPEVLNRIAREIKEVVDLGVEVAIVVGGGNIFRGASAAEAG-------MDRAT-----AD 68 (231)
T ss_pred CeEEEEeCceEECCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcccccchhhhcC-------CCchh-----hh
Confidence 57999999999998763 6888999999999999988889999999997544111111111 11111 11
Q ss_pred HHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHH-HHHHHHHHhCCceeEEcCCCceecCCCcccCCCCc
Q 005131 91 ACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQL-SETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGI 169 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~-~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~ 169 (713)
.+..++......++...|.+.|+++..+.- .+.. ...... .+.++.+|++|.|||++| .. +.+
T Consensus 69 ~~g~~~~~~n~~ll~~~L~~~Gv~a~~l~~--~~~~--~~~~~~~~~~l~~~l~~g~ipV~~g-----~~-------G~~ 132 (231)
T cd04254 69 YMGMLATVINALALQDALESLGVKTRVMSA--IPMQ--GVAEPYIRRRAIRHLEKGRVVIFAG-----GT-------GNP 132 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEcH--HHhh--hhhcccCHHHHHHHHHCCCEEEEEC-----Cc-------CCC
Confidence 233344444445677889999987643211 1110 010111 378999999999999986 11 122
Q ss_pred ccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHH
Q 005131 170 FWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAY 248 (713)
Q Consensus 170 ~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~ 248 (713)
.+++|++|+++|.+|+|++|+|+|||||||++|| .+|++++|++|+++|+.+. +..+|++ +++..+.+
T Consensus 133 ~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~~---------~~~~~d~--~a~~~a~~ 201 (231)
T cd04254 133 FFTTDTAAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLSK---------GLKVMDA--TAFTLCRD 201 (231)
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHhc---------chhhhHH--HHHHHHHH
Confidence 3678999999999999999999999999999999 7899999999999887551 2456777 68888888
Q ss_pred cCCcEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 249 AGIPVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 249 ~gv~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
+|++++|+|+++|+++.+++.|+..||++
T Consensus 202 ~gi~~~I~~g~~~~~l~~~l~g~~~GT~i 230 (231)
T cd04254 202 NNLPIVVFNINEPGNLLKAVKGEGVGTLI 230 (231)
T ss_pred CCCeEEEEeCCCccHHHHHHCCCCCCEEe
Confidence 99999999999999999999999999987
No 173
>PRK14557 pyrH uridylate kinase; Provisional
Probab=99.96 E-value=3.2e-27 Score=239.94 Aligned_cols=234 Identities=17% Similarity=0.245 Sum_probs=176.0
Q ss_pred hhccceEEEEeCccceecCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhh-chHHHhhhhccCcccccccCccc
Q 005131 8 VKDVKRIVVKVGTAVVTRSDG-RLALGRLGALCEQIKELNSQGYEVILVSSGAVGL-GRQRLRYRRLINSSFADLQKPQI 85 (713)
Q Consensus 8 ~~~~~~iViKlGGs~l~~~~~-~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i-~~~~~~~~~~~~~~~~~~~~~~~ 85 (713)
|.+++++||||||++|.++++ +++.+.+++++++|+.+.+.|++++||||||..+ ++. .+... ++.
T Consensus 1 ~~~~~riViKlGG~al~~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvVVvGgGn~~rg~~-a~~~~--------~~~--- 68 (247)
T PRK14557 1 MRPYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHL-AEEWG--------IDR--- 68 (247)
T ss_pred CCcccEEEEEeCceeECCCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEECCcHHHHHHH-HHhcC--------CCh---
Confidence 456899999999999987654 6888899999999999999999999999996433 332 11111 111
Q ss_pred cchHHHHHHcchHHHHHHHHHHhhhc-CCccceeeecccccCchhHHHHH-HHHHHHHHhCCceeEEcCCCceecCCCcc
Q 005131 86 ELDGKACAAVGQNSIMALYDTLFSEL-DLTSAQLLVTDNDFRDKEFRSQL-SETVKSLLSLRVIPVFNENDAVSTRKAPY 163 (713)
Q Consensus 86 ~l~~~~~~~~g~~~~~~l~~~~l~~~-gi~~~~~~~~~~~~~~~~~~~~~-~~~i~~~l~~g~vpV~~g~d~v~~~~~~~ 163 (713)
...+.+..+|+.....++...|... ++.+. ++++..+.... ... ...+...|++|.|||++| +.
T Consensus 69 -~~~D~ig~~g~~lna~ll~~~l~~~~~~~~~--i~t~~~~~~~~--~~~~~~~~~~~l~~g~VvV~~G-----~~---- 134 (247)
T PRK14557 69 -VEADNIGTLGTIINSLMLRGVLTSKTNKEVR--VMTSIPFNAVA--EPYIRLRAVHHLDNGYIVIFGG-----GN---- 134 (247)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhhhCCcee--EEecccccccc--chhhHHHHHHHHhCCCEEEEEC-----Cc----
Confidence 1123556666666666777777663 44432 34444433221 111 134566689999999987 21
Q ss_pred cCCCCcccchhHHHHHHHhhhCCCEEEEe-ecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHH
Q 005131 164 EDSSGIFWDNDSLAALLALELKADLLILL-SDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVK 241 (713)
Q Consensus 164 ~~~~g~~~~sD~~A~~lA~~l~Ad~li~~-TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~ 241 (713)
+.+.+++|++|+++|.+++||.|+++ ||||||||+|| .+|+|++|++|+++|+. .. ....|++ +
T Consensus 135 ---g~~~~stD~lAallA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~---~~------~~~~~~~--~ 200 (247)
T PRK14557 135 ---GQPFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVV---RQ------NIQVMDQ--A 200 (247)
T ss_pred ---CCCccChHHHHHHHHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhc---cc------CHHHHHH--H
Confidence 12346789999999999999999999 49999999999 89999999999988773 22 2446887 6
Q ss_pred HHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEecCC
Q 005131 242 AAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQDA 281 (713)
Q Consensus 242 aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~~ 281 (713)
++..|.++|++++|+|+++|+++.+++.|+..||++.+.+
T Consensus 201 A~~~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~~~ 240 (247)
T PRK14557 201 ALLLARDYNLPAHVFNFDEPGVMRRICLGEHVGTLINDDA 240 (247)
T ss_pred HHHHHHHCCCcEEEEeCCCChHHHHHHcCCCCcEEEecCc
Confidence 9999999999999999999999999999999999998863
No 174
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.96 E-value=4.6e-28 Score=269.64 Aligned_cols=261 Identities=18% Similarity=0.257 Sum_probs=189.0
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
.+++|||+|||++.+++ ++.++++|+.+.+.|.++||||||++++++.+.+ .+.......++|.++.+...-
T Consensus 25 ~~~~VIk~GG~~l~~~~-------~~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~-~g~~~~~~~G~RvT~~~~l~~ 96 (441)
T PRK05279 25 GKTFVIMLGGEAIAHGN-------FSNIVHDIALLHSLGIRLVLVHGARPQIEEQLAA-RGIEPRYHKGLRVTDAAALEC 96 (441)
T ss_pred CCEEEEEECchhccChh-------HHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH-cCCCceecCCcccCCHHHHHH
Confidence 46899999999998764 6789999999999999999999999999998543 333333445677776544333
Q ss_pred HHHHcchHHHHHHHHHHhhhcCCccce-----eee--------------cccccCchhHHHHHH-HHHHHHHhCCceeEE
Q 005131 91 ACAAVGQNSIMALYDTLFSELDLTSAQ-----LLV--------------TDNDFRDKEFRSQLS-ETVKSLLSLRVIPVF 150 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~gi~~~~-----~~~--------------~~~~~~~~~~~~~~~-~~i~~~l~~g~vpV~ 150 (713)
...+.|+.... +.++|.. |+++.. +.. ...+++..+.+..+. +.|+.+|+.|+|||+
T Consensus 97 ~~~~~g~v~~~--l~~~l~~-g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~v~~v~~~~i~~ll~~g~ipV~ 173 (441)
T PRK05279 97 VKQAAGELRLD--IEARLSM-GLPNTPMAGAHIRVVSGNFVTARPLGVDDGVDYQHTGEVRRIDAEAIRRQLDSGAIVLL 173 (441)
T ss_pred HHHHHHHHHHH--HHHHHhc-cCCCCcccCCcceEeeccEEEEEECCCCCCccccceeeEEEEeHHHHHHHHHCCCeEEE
Confidence 33334444333 3444432 443211 111 112556666655554 999999999999999
Q ss_pred cCCCceecCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCC
Q 005131 151 NENDAVSTRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKS 229 (713)
Q Consensus 151 ~g~d~v~~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~ 229 (713)
++ +. +...++.+ +|+|.+|+.||.+|+|++|+|+|||||||++ ++++|++|+.+++++++..-. .
T Consensus 174 ~~---i~-----~~~~g~~~ni~~D~~a~~lA~~l~a~~lv~ltdv~GV~~~-----~~~~i~~i~~~~~~~~~~~~~-~ 239 (441)
T PRK05279 174 SP---LG-----YSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDE-----DGELIRELSPNEAQALLEALE-D 239 (441)
T ss_pred CC---ce-----ECCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCC-----CCchhhhCCHHHHHHHHhhhh-c
Confidence 76 22 22233434 8999999999999999999999999999964 589999999999988876210 1
Q ss_pred ccccCchHHHHHHHHHHHHcCCc-EEEEeCCCchhHH-HHhcCCcceeEEecCC-CCCCCCCHHHHHHHH
Q 005131 230 RVGRGGMTAKVKAAVNAAYAGIP-VVITSGYSDENIL-KVLQGERIGTLFHQDA-HILDPFNEVGAREMA 296 (713)
Q Consensus 230 ~~~~g~m~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~-~~~tge~iGT~i~~~~-~~~~~~t~~~v~~av 296 (713)
.+++|||.|||+++..++++|++ ++|+++..|+++. .+++.+..||.+..+. ..+-.++.+|+++..
T Consensus 240 ~~~~ggM~~Kv~~a~~~~~~gv~~v~i~~~~~~~~l~~~l~~~~g~GT~i~~~~y~~IR~at~~D~~~I~ 309 (441)
T PRK05279 240 GDYNSGTARFLRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVMESLEQLRRATIDDVGGIL 309 (441)
T ss_pred CCCCccHHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCceEEecCchHHeEeCCHHHHHHHH
Confidence 26799999999999999999996 9999999999986 5666777999998751 123334444444433
No 175
>TIGR02075 pyrH_bact uridylate kinase. This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076.
Probab=99.95 E-value=2.5e-27 Score=240.75 Aligned_cols=228 Identities=21% Similarity=0.280 Sum_probs=169.7
Q ss_pred cceEEEEeCccceecCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhh-chHHHhhhhccCcccccccCccccch
Q 005131 11 VKRIVVKVGTAVVTRSDG-RLALGRLGALCEQIKELNSQGYEVILVSSGAVGL-GRQRLRYRRLINSSFADLQKPQIELD 88 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~-~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i-~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (713)
++++|||||||+|+++.+ +++.+.+++++++|+++.+.|+++|||||||..+ ++. .+.+... ...
T Consensus 1 ~~~iViKlGGs~i~~~~~~~~~~~~i~~~a~~i~~~~~~~~~vviV~G~Gs~~~~~~-a~~~~~~-----~~~------- 67 (233)
T TIGR02075 1 YKRVLLKLSGEALAGESGFGIDPDRLNRIANEIKELVKMGIEVGIVIGGGNIFRGVS-AKELGID-----RVT------- 67 (233)
T ss_pred CCEEEEEeChhhcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCCHHHHHHH-HHhcCCC-----Ccc-------
Confidence 478999999999998322 6888999999999999988889999999996422 332 2222211 100
Q ss_pred HHHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCC
Q 005131 89 GKACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSG 168 (713)
Q Consensus 89 ~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g 168 (713)
.......++.....++...|.+.|+++. .++..++.... .....+.++.+|++|.|||+.+ .. +.
T Consensus 68 ~d~~g~~~~~l~~~l~~~~L~~~Gi~a~--~l~~~~~~~~~-~~~~~~~i~~ll~~g~VpV~~g-----~~-------g~ 132 (233)
T TIGR02075 68 ADYMGMLATVINGLALRDALEKLGVKTR--VLSAISMPQIC-ESYIRRKAIKHLEKGKVVIFSG-----GT-------GN 132 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcE--EeccccCCCCc-cccCHHHHHHHHHCCCEEEEEC-----CC-------CC
Confidence 1233344444444456788999998863 22222221000 0011377888999999999976 11 11
Q ss_pred cccchhHHHHHHHhhhCCCEEEEeec-CCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHH
Q 005131 169 IFWDNDSLAALLALELKADLLILLSD-VEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNA 246 (713)
Q Consensus 169 ~~~~sD~~A~~lA~~l~Ad~li~~Td-V~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a 246 (713)
.++++|++|+++|..|+||+|+|+|| |||||++|| .+|++++|++|+++|+.+. ....+++ +++..+
T Consensus 133 ~~~s~D~~a~~lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~---------~~~~~d~--~~~~~a 201 (233)
T TIGR02075 133 PFFTTDTAAALRAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKK---------NLKVMDL--TAFALA 201 (233)
T ss_pred CCCCchHHHHHHHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhc---------CHHHHHH--HHHHHH
Confidence 24778999999999999999999999 999999999 7899999999999887652 2346666 688888
Q ss_pred HHcCCcEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 247 AYAGIPVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 247 ~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
.++|++++|+|+.+|+++.+++.|+..||++
T Consensus 202 ~~~~i~v~i~~g~~~~~l~~~l~g~~~GT~i 232 (233)
T TIGR02075 202 RDNNLPIVVFNIDEPGALKKVILGKGIGTLV 232 (233)
T ss_pred HHCCCeEEEEeCCCcchHHHHHCCCCCCEEe
Confidence 8999999999999999999999999999987
No 176
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=5.8e-28 Score=248.78 Aligned_cols=237 Identities=23% Similarity=0.297 Sum_probs=171.1
Q ss_pred EEEEeCccceecCCCcccHHHHHHHHHHHHHHHH-CCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHH
Q 005131 14 IVVKVGTAVVTRSDGRLALGRLGALCEQIKELNS-QGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKAC 92 (713)
Q Consensus 14 iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~-~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 92 (713)
+|||||||++++++ .+++++++|+.+.+ .|.++|||||||++++.. ++.++.......+++.+....-....
T Consensus 1 ~ViK~GGs~l~~~~------~~~~~~~~i~~~~~~~~~~iVlVhGgg~~~~~~-~~~~g~~~~~~~g~rvt~~~~l~~~~ 73 (252)
T cd04249 1 LVIKLGGALLETEA------ALEQLFSALSEYQQQHNRQLVIVHGGGCVVDEL-LKKLNFPSEKKNGLRVTPKEQIPYIT 73 (252)
T ss_pred CEEEEChHHhcChh------hHHHHHHHHHHHHHhCCCCEEEECCCCHHHHHH-HHHcCCCCEEECCEecCCHHHHHHHH
Confidence 48999999998764 68899999998754 578999999998776664 55555444223345554322111112
Q ss_pred HHc-chHHHHHHHHHHhhhcCCcccee------eeccc----ccCchhHHHHHH-HHHHHHHhCCceeEEcCCCceecCC
Q 005131 93 AAV-GQNSIMALYDTLFSELDLTSAQL------LVTDN----DFRDKEFRSQLS-ETVKSLLSLRVIPVFNENDAVSTRK 160 (713)
Q Consensus 93 ~~~-g~~~~~~l~~~~l~~~gi~~~~~------~~~~~----~~~~~~~~~~~~-~~i~~~l~~g~vpV~~g~d~v~~~~ 160 (713)
..+ ++.. .. +.+.+.+.|+++..+ +++.. ++++.+....++ +.++.+|++|.|||++| +.
T Consensus 74 ~~~~~~~n-~~-lv~~l~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~G~v~~i~~~~l~~ll~~g~ipVi~~---~g--- 145 (252)
T cd04249 74 GALAGTAN-KQ-LMAQAIKAGLKPVGLSLADGGMTAVTQLDPELGAVGKATANDPSLLNDLLKAGFLPIISS---IG--- 145 (252)
T ss_pred HHHcCccc-HH-HHHHHHhCCCCceeeeccCCCEEEEEEcCCCCCcccceEEEcHHHHHHHHHCCCEEEECC---CE---
Confidence 222 2221 12 223334667665422 22221 455556665554 99999999999999986 11
Q ss_pred CcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHH
Q 005131 161 APYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAK 239 (713)
Q Consensus 161 ~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~K 239 (713)
....++.+ +|+|++|+++|.+|+|+ ++|+|||||||++| +++|++|+++|+++++..+ ++++||.+|
T Consensus 146 --~~~~g~~~~~~~D~~A~~lA~~l~A~-~i~ltdv~Gv~~~~-----~~~i~~i~~~e~~~~~~~g----~~~gGm~~k 213 (252)
T cd04249 146 --ADDQGQLMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDAD-----KQLISELNAKQAAELIEQG----VITDGMIVK 213 (252)
T ss_pred --ECCCCCEeeecHHHHHHHHHHHcCCC-EEEEeCCcccCCCC-----CcCccccCHHHHHHHHhcC----CCcCCcHHH
Confidence 22233334 89999999999999999 68999999999875 4899999999999987754 689999999
Q ss_pred HHHHHHHHHcC-CcEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 240 VKAAVNAAYAG-IPVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 240 l~aa~~a~~~g-v~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
++++..+++.+ ++++|++++.|+.+.++++|+..||.+
T Consensus 214 l~~a~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~~GT~I 252 (252)
T cd04249 214 VNAALDAAQSLRRGIDIASWQYPEQLTALLAGEPVGTKI 252 (252)
T ss_pred HHHHHHHHHhCCCeEEEEeCCCccHHHHHHcCCCCCcCC
Confidence 99999988765 569999999999999999999999864
No 177
>cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like . Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=6.7e-28 Score=249.07 Aligned_cols=237 Identities=25% Similarity=0.336 Sum_probs=174.8
Q ss_pred EEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCcccc-chHHHH
Q 005131 14 IVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIE-LDGKAC 92 (713)
Q Consensus 14 iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~ 92 (713)
+||||||+++++++ .+++++++|+.+++.|.++||||||++ +++.+++.++.......+++.+... +.. ..
T Consensus 1 ~ViKlGGs~l~~~~------~~~~~~~~i~~l~~~g~~~VlVhG~g~-~~~~~~~~~~~~~~~~~~~r~t~~~~l~~-~~ 72 (256)
T cd04238 1 VVIKYGGSAMKDEE------LKEAFADDIVLLKQVGINPVIVHGGGP-EINELLKRLGIESEFVNGLRVTDKETMEI-VE 72 (256)
T ss_pred CEEEEChHHhcCcc------HHHHHHHHHHHHHHCCCCEEEECCCcH-HHHHHHHHCCCCCEeECCeecCCHHHHHH-HH
Confidence 59999999999876 578999999999999999999987764 5555566655543222233432221 111 22
Q ss_pred HHc-chHHHHHHHHHHhhhcCCcccee------eecc-------cccCchhHHHHHH-HHHHHHHhCCceeEEcCCCcee
Q 005131 93 AAV-GQNSIMALYDTLFSELDLTSAQL------LVTD-------NDFRDKEFRSQLS-ETVKSLLSLRVIPVFNENDAVS 157 (713)
Q Consensus 93 ~~~-g~~~~~~l~~~~l~~~gi~~~~~------~~~~-------~~~~~~~~~~~~~-~~i~~~l~~g~vpV~~g~d~v~ 157 (713)
.++ |... ..+...|++.|+++..+ +++. .++++.+....+. +.|+.+|+.|.|||++| +.
T Consensus 73 ~a~~g~ln--~~i~~~L~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~l~~ll~~g~ipVv~~---~~ 147 (256)
T cd04238 73 MVLAGKVN--KELVSLLNRAGGKAVGLSGKDGGLIKAEKKEEKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAP---IA 147 (256)
T ss_pred HHHcCchH--HHHHHHHHhCCCCCCCcccccCCEEEEEECCCCCCCcccccceEEECHHHHHHHHHCCCEEEECC---cE
Confidence 222 4332 22466777777776422 2222 1344445555554 99999999999999986 22
Q ss_pred cCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCch
Q 005131 158 TRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGM 236 (713)
Q Consensus 158 ~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m 236 (713)
. ...++.+ +|+|++|+.+|.+|+|++|+|+|||+|||++ ++++|++|+++|+.+++..+ +++|+|
T Consensus 148 ~-----~~~g~~~~~~~D~~A~~lA~~l~a~~li~ltdv~Gv~~~-----~~~~i~~i~~~e~~~~~~~~----~~~ggm 213 (256)
T cd04238 148 V-----DEDGETYNVNADTAAGAIAAALKAEKLILLTDVPGVLDD-----PGSLISELTPKEAEELIEDG----VISGGM 213 (256)
T ss_pred E-----CCCCcEEEECHHHHHHHHHHHcCCCEEEEEeCCccccCC-----CCCccccCCHHHHHHHHHcC----CCCCCh
Confidence 2 1233333 8999999999999999999999999999987 38999999999998877643 678999
Q ss_pred HHHHHHHHHHHHcCCc-EEEEeCCCchhHHHHhcC-CcceeEE
Q 005131 237 TAKVKAAVNAAYAGIP-VVITSGYSDENILKVLQG-ERIGTLF 277 (713)
Q Consensus 237 ~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~tg-e~iGT~i 277 (713)
.+|+++|..++++|++ ++|++++.|+++...+.+ +..||.+
T Consensus 214 ~~Kl~~a~~~~~~g~~~v~I~~g~~~~~l~~~l~~~~~~GT~i 256 (256)
T cd04238 214 IPKVEAALEALEGGVRKVHIIDGRVPHSLLLELFTDEGIGTMI 256 (256)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCCCcHHHHHHhcCCCCCCCC
Confidence 9999999999999876 999999999999888776 6678864
No 178
>PRK08210 aspartate kinase I; Reviewed
Probab=99.95 E-value=1.3e-27 Score=262.96 Aligned_cols=232 Identities=23% Similarity=0.302 Sum_probs=178.9
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhch-----HHHhhhhccCcccccccCccc
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGR-----QRLRYRRLINSSFADLQKPQI 85 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~-----~~~~~~~~~~~~~~~~~~~~~ 85 (713)
|+++|||||||++++++ .+.+++++|+.+.+.|++++|||||+++.|+ .++....... ... .
T Consensus 1 m~~iViK~GGs~l~~~~------~~~~~~~~i~~~~~~g~~~vvV~sa~g~~G~~~~t~~l~~~~~~~~---~~~----~ 67 (403)
T PRK08210 1 MKIIVQKFGGTSVSTEE------RRKMAVNKIKKALKEGYKVVVVVSAMGRKGDPYATDTLLSLVGEEF---SEI----S 67 (403)
T ss_pred CCeEEEeECCcccCCHH------HHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCccHHHHHHHHHhc---cCC----C
Confidence 57899999999999865 6889999999999999999999977766554 3322211101 011 1
Q ss_pred cchHHHHHHcchHHHHHHHHHHhhhcCCcccee------eecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecC
Q 005131 86 ELDGKACAAVGQNSIMALYDTLFSELDLTSAQL------LVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTR 159 (713)
Q Consensus 86 ~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~ 159 (713)
.-..+.+.++|+..+..++...|.+.|+++..+ +++.+++..........+.+..+++.|.|||++|+-+. +
T Consensus 68 ~~~~~~l~~~Ge~~s~~~~~~~l~~~Gi~a~~l~~~~~~~~t~~~~~~~~v~~~~~~~l~~~l~~~~vpVi~G~~~~--~ 145 (403)
T PRK08210 68 KREQDLLMSCGEIISSVVFSNMLNENGIKAVALTGGQAGIITDDNFTNAKIIEVNPDRILEALEEGDVVVVAGFQGV--T 145 (403)
T ss_pred hHHHHHHHhHhHHHHHHHHHHHHHhCCCCeEEechHHccEEccCCCCceeeehhhHHHHHHHHhcCCEEEeeCeeec--C
Confidence 112346789999999988999999999998644 55665554433222224889999999999999971111 1
Q ss_pred CCcccCCCCc--c--cchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccC
Q 005131 160 KAPYEDSSGI--F--WDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRG 234 (713)
Q Consensus 160 ~~~~~~~~g~--~--~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g 234 (713)
. .+.. + +++|++|+.||.+|+|++|+|||||||||++|| .+|++++|++|+++|+.+++.+| ..
T Consensus 146 ~-----~g~~~~l~rg~sD~~A~~lA~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls~~ea~~l~~~G------~~ 214 (403)
T PRK08210 146 E-----NGDITTLGRGGSDTTAAALGVALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVSYNEVFQMAYQG------AK 214 (403)
T ss_pred C-----CCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccCHHHHHHHHHCC------cc
Confidence 1 2222 1 589999999999999999999999999999999 88999999999999999988765 67
Q ss_pred chHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEecC
Q 005131 235 GMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQD 280 (713)
Q Consensus 235 ~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~ 280 (713)
.||| +++.++.++++|++|.|+++++ .||+|...
T Consensus 215 v~~~--~a~~~~~~~~i~i~i~~~~~~~----------~gT~I~~~ 248 (403)
T PRK08210 215 VIHP--RAVEIAMQANIPLRIRSTYSDS----------PGTLITSL 248 (403)
T ss_pred ccCH--HHHHHHHHCCCeEEEEecCCCc----------CCcEEEec
Confidence 8999 6999999999999999987652 29999763
No 179
>cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants. The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP.
Probab=99.95 E-value=3.7e-27 Score=246.60 Aligned_cols=233 Identities=20% Similarity=0.302 Sum_probs=179.7
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcc----cc----c-----
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSS----FA----D----- 79 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~----~~----~----- 79 (713)
++|+|||||++.+.+ .++++++.|+.. ..+.++++|+|+.+++++.+++........ +. .
T Consensus 1 ~~V~KFGGtSv~~~~------~~~~v~~iI~~~-~~~~~~vvVvSA~~~iTd~L~~~~~~~~~~~~~~~~~~l~~i~~~h 73 (298)
T cd04244 1 RLVMKFGGTSVGSAE------RIRHVADLVGTY-AEGHEVVVVVSAMGGVTDRLLLAAEAAVSGRIAGVKDFIEILRLRH 73 (298)
T ss_pred CEEEEECcccCCCHH------HHHHHHHHHHHh-hcCCCEEEEEeCCCCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 579999999999854 799999999876 567899999999999999987654321100 00 0
Q ss_pred ------ccCc-----------------------------cccchHHHHHHcchHHHHHHHHHHhhhcCCcccee------
Q 005131 80 ------LQKP-----------------------------QIELDGKACAAVGQNSIMALYDTLFSELDLTSAQL------ 118 (713)
Q Consensus 80 ------~~~~-----------------------------~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~------ 118 (713)
+-.. ......+.+.+.|+..+..++...|++.|+++..+
T Consensus 74 ~~~~~~l~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~l~~~~~~ 153 (298)
T cd04244 74 IKAAKEAISDEEIAEVESIIDSLLEELEKLLYGIAYLGELTPRSRDYIVSFGERLSAPIFSAALRSLGIKARALDGGEAG 153 (298)
T ss_pred HHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchHhhHhccHhHHHHHHHHHHHHHhCCCCeEEEcHHHcc
Confidence 0000 00112356788899999999999999999987532
Q ss_pred eecccccCch----hHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEE
Q 005131 119 LVTDNDFRDK----EFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLL 189 (713)
Q Consensus 119 ~~~~~~~~~~----~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~l 189 (713)
+++++++... +...++...+..+++.|.|||++| +.+.+..|.. ++||++|+.+|.+|+|++|
T Consensus 154 i~t~~~~~~a~~~~~~~~~i~~~l~~ll~~~~vpVv~G--------fig~~~~g~~ttlgRggsD~~A~~~A~~l~a~~l 225 (298)
T cd04244 154 IITDDNFGNARPLPATYERVRKRLLPMLEDGKIPVVTG--------FIGATEDGAITTLGRGGSDYSATIIGAALDADEI 225 (298)
T ss_pred eeecCcccccccchhHHHHHHHHHHHHhhcCCEEEEeC--------ccccCCCCCEEEecCCChHHHHHHHHHHcCCCEE
Confidence 4566555432 345555566678889999999987 2122222322 7999999999999999999
Q ss_pred EEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHh
Q 005131 190 ILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVL 268 (713)
Q Consensus 190 i~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~ 268 (713)
+|||||||||++|| .+|++++|++|+++|+.+++.+| ...+|| +++.+++++|||++|.|+++|+
T Consensus 226 ~i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~el~~~G------a~vlhp--~ai~~a~~~~Ipi~i~n~~~p~------ 291 (298)
T cd04244 226 WIWKDVDGVMTADPRIVPEARTIPRLSYAEAMELAYFG------AKVLHP--RTVEPAMEKGIPVRVKNTFNPE------ 291 (298)
T ss_pred EEEECCCCCCCCCCCCCCCCeEcCccCHHHHHHHHhCC------CcccCH--HHHHHHHHcCCcEEEeeCCCCC------
Confidence 99999999999999 88999999999999999998865 799999 6999999999999999999984
Q ss_pred cCCcceeEE
Q 005131 269 QGERIGTLF 277 (713)
Q Consensus 269 tge~iGT~i 277 (713)
..||+|
T Consensus 292 ---~~GT~I 297 (298)
T cd04244 292 ---APGTLI 297 (298)
T ss_pred ---CCCCEe
Confidence 458876
No 180
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.95 E-value=7e-27 Score=258.87 Aligned_cols=260 Identities=20% Similarity=0.216 Sum_probs=192.5
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
.+++|||+|||++.++. +..++++|+.++..|.++|||||||++++..+. ..+.......++|.++.+.-..
T Consensus 17 ~~~~ViK~GG~~~~~~~-------~~~~~~~i~~l~~~g~~~vlVHGgg~~i~~~~~-~~g~~~~~~~G~RvT~~~~l~~ 88 (429)
T TIGR01890 17 GKTFVVGLGGELVEGGN-------LGNIVADIALLHSLGVRLVLVHGARPQIERILA-ARGRTPHYHRGLRVTDEASLEQ 88 (429)
T ss_pred CCEEEEEEChhhccCcc-------HHHHHHHHHHHHHCCCcEEEEcCCCHHHHHHHH-HcCCCceeeCCcccCCHHHHHH
Confidence 47899999999998765 568999999999999999999999999999854 3344443455677776543222
Q ss_pred HHHHcchHHHHHHHHHHhhhc----C-----Ccc--ceeee-------cccccCchhHHHHHH-HHHHHHHhCCceeEEc
Q 005131 91 ACAAVGQNSIMALYDTLFSEL----D-----LTS--AQLLV-------TDNDFRDKEFRSQLS-ETVKSLLSLRVIPVFN 151 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~----g-----i~~--~~~~~-------~~~~~~~~~~~~~~~-~~i~~~l~~g~vpV~~ 151 (713)
.....|+.... +.+.|.+. + +.. +.++. ...|+++.|.+..++ +.|+.+|+.|+|||++
T Consensus 89 ~~~~~g~vn~~--l~~~l~~~~~~~~~~~~~l~~~dg~~~~a~~~~~~~~~~~g~~G~v~~v~~~~l~~ll~~g~ipvi~ 166 (429)
T TIGR01890 89 AQQAAGTLRLA--IEARLSMSLSNTPMAGSRLPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTEGIRRQLDAGSIVLLS 166 (429)
T ss_pred HHHHhChHHHH--HHHHHHhcCCcccccccCceEccceEEEEEECCCCcCccccccceEEEEcHHHHHHHHHCCCeEEEC
Confidence 22234444422 33334333 1 111 11111 123677788777776 9999999999999998
Q ss_pred CCCceecCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCc
Q 005131 152 ENDAVSTRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSR 230 (713)
Q Consensus 152 g~d~v~~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~ 230 (713)
| .++...++.+ +|+|.+|+.||.+|+|++|+|+|||+|||++ ++++|++|+.+|+++++..
T Consensus 167 p--------i~~~~~g~~~nvnaD~~A~~lA~al~a~kli~ltdv~Gv~~~-----~g~~i~~i~~~~~~~l~~~----- 228 (429)
T TIGR01890 167 P--------LGHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPGISDP-----DGTLAAELSPQEVESLAER----- 228 (429)
T ss_pred C--------cccCCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCCCcccCC-----CCCCcccCCHHHHHHHHHh-----
Confidence 7 2233345555 9999999999999999999999999999975 4889999999999988764
Q ss_pred cccCc-hHHHHHHHHHHHHcCCc-EEEEeCCCchhHH-HHhcCCcceeEEecCCC-CCCCCCHHHHHHHHHHH
Q 005131 231 VGRGG-MTAKVKAAVNAAYAGIP-VVITSGYSDENIL-KVLQGERIGTLFHQDAH-ILDPFNEVGAREMAVAA 299 (713)
Q Consensus 231 ~~~g~-m~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~-~~~tge~iGT~i~~~~~-~~~~~t~~~v~~av~~A 299 (713)
+.++ |.||++++..+++.|++ ++|++++.|+++. ++++.+..||.+..+.. ..-.++.+|+++..+-.
T Consensus 229 -~~~~~~~~kl~~a~~a~~~gv~~v~i~~g~~~~~l~~el~~~~g~GT~i~~d~y~~IR~at~~Dl~~I~~L~ 300 (429)
T TIGR01890 229 -LGSETTRRLLSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKEAFESIRQATIDDIGGIAALI 300 (429)
T ss_pred -ccCCCcHHHHHHHHHHHHcCCCeEEEECCCCCcHHHHHHhcCCCCcceEeccchhheEECCHHHHHHHHHHH
Confidence 2345 59999999999999987 9999999999875 77899999999987521 23344566666555543
No 181
>cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine.
Probab=99.95 E-value=3.8e-27 Score=243.87 Aligned_cols=230 Identities=20% Similarity=0.195 Sum_probs=176.5
Q ss_pred EEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChh-------hhchHHHhhhhccCcc------cccc
Q 005131 14 IVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAV-------GLGRQRLRYRRLINSS------FADL 80 (713)
Q Consensus 14 iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~-------~i~~~~~~~~~~~~~~------~~~~ 80 (713)
.|+||||+++.+.+ .++++++.|+. .+.+++||+|+.+ .+++.++......... ...+
T Consensus 2 ~V~KFGGtSv~~~~------~i~~v~~ii~~---~~~~~vvVvSA~~~~~~~~~~vTd~L~~~~~~~~~~~~~~~~~~~i 72 (288)
T cd04245 2 KVVKFGGSSLASAE------QFQKVKAIVKA---DPERKIVVVSAPGKRFKDDTKVTDLLILYAEAVLAGEDTESIFEAI 72 (288)
T ss_pred EEEEECcCccCCHH------HHHHHHHHHHh---cCCCEEEEEcCCCCCCCchhhHHHHHHHHHHHHhcCcchHHHHHHH
Confidence 59999999999854 78889988874 3568899999976 5888876543221100 0000
Q ss_pred cCc-------------------------------cccchHHHHHHcchHHHHHHHHHHhhhcCCccce-----e-eeccc
Q 005131 81 QKP-------------------------------QIELDGKACAAVGQNSIMALYDTLFSELDLTSAQ-----L-LVTDN 123 (713)
Q Consensus 81 ~~~-------------------------------~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~-----~-~~~~~ 123 (713)
+.. ......+.+.+.|+..+..++...|++.|+++.. + +++++
T Consensus 73 ~~~h~~~~~~L~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~i~s~GE~lSa~ll~~~L~~~Gi~a~~ld~~~~~i~t~~ 152 (288)
T cd04245 73 VDRYAEIADELGLPMSILEEIAEILENLANLDYANPDYLLDALKARGEYLNAQLMAAYLNYQGIDARYVIPKDAGLVVTD 152 (288)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHhHHHHHHHHHHHHHHCCCCeEEEcHHHCceeecC
Confidence 000 0112335788999999999999999999998853 2 56677
Q ss_pred ccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEEEEeecCCcc
Q 005131 124 DFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLLILLSDVEGL 198 (713)
Q Consensus 124 ~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~li~~TdV~GV 198 (713)
++++........+.+...++.+.|||++|+- +.+..|.. ++||++|+.+|.+|+|+.+.+|||||||
T Consensus 153 ~~~~a~~~~~~~~~~~~~~~~~~v~Vv~Gf~--------g~~~~G~~ttLgRggSD~tAal~A~~l~A~~v~i~tdVdGv 224 (288)
T cd04245 153 EPGNAQILPESYQKIKKLRDSDEKLVIPGFY--------GYSKNGDIKTFSRGGSDITGAILARGFQADLYENFTDVDGI 224 (288)
T ss_pred CccccccchhhHHHHHHHHhCCCEEEEeCcc--------ccCCCCCEEEcCCCchHHHHHHHHHHcCCCEEEEEeCCCce
Confidence 7766554333347788888889999999821 22222222 7899999999999999999999999999
Q ss_pred ccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 199 YSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 199 ~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
||+|| .+|+|+.|++|||+||.+++.+ +.+.||| +++.++++++||++|.|.++|+ ..||+|
T Consensus 225 ytaDPr~v~~A~~i~~lsy~EA~ela~~------GakVlhp--~ai~~a~~~~Ipi~v~n~~~p~---------~~GT~I 287 (288)
T cd04245 225 YAANPRIVANPKPISEMTYREMRELSYA------GFSVFHD--EALIPAIEAGIPINIKNTNHPE---------APGTLI 287 (288)
T ss_pred ECCCCCCCCCCeEeCccCHHHHHHHHHC------CCcccCH--HHHHHHHHCCCcEEEeeCCCCC---------CCCcee
Confidence 99999 8999999999999999998775 5899999 5999999999999999999884 458876
No 182
>PRK06635 aspartate kinase; Reviewed
Probab=99.95 E-value=3.3e-27 Score=260.30 Aligned_cols=232 Identities=22% Similarity=0.282 Sum_probs=180.3
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
|+++|+||||+++.+++ .+++++++|+.+.+.|+++||||||++..++.+++........ . .....+
T Consensus 1 m~~iViK~GGs~l~~~~------~~~~~~~~i~~~~~~g~~~vvV~sg~~~~~~~l~~~~~~~~~~----~---~~~~~~ 67 (404)
T PRK06635 1 MALIVQKFGGTSVGDVE------RIKRVAERVKAEVEAGHQVVVVVSAMGGTTDELLDLAKEVSPL----P---DPRELD 67 (404)
T ss_pred CCeEEEeECCcccCCHH------HHHHHHHHHHHHHHcCCCEEEEEeCCCCcHHHHHHHHHHhccC----C---CHHHHH
Confidence 56899999999998744 7999999999999999999999998888888766654321100 0 112345
Q ss_pred HHHHcchHHHHHHHHHHhhhcCCccc-----ee-eecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCccc
Q 005131 91 ACAAVGQNSIMALYDTLFSELDLTSA-----QL-LVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYE 164 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~-~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~ 164 (713)
.+.++|+..+..++...|++.|+++. +. ++++.++..........+.++.+++.|.|||++|+-+...
T Consensus 68 ~~~~~Ge~~~~~~~~~~l~~~g~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ipVi~g~~~~~~------ 141 (404)
T PRK06635 68 MLLSTGEQVSVALLAMALQSLGVKARSFTGWQAGIITDSAHGKARITDIDPSRIREALDEGDVVVVAGFQGVDE------ 141 (404)
T ss_pred HHhhhhHHHHHHHHHHHHHhCCCCeEEeChhhCCEEecCCCCceEeeecCHHHHHHHHhCCCEEEecCccEeCC------
Confidence 77888998888889999999999873 33 4555555433322222488999999999999997222211
Q ss_pred CCCCc----ccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHH
Q 005131 165 DSSGI----FWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAK 239 (713)
Q Consensus 165 ~~~g~----~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~K 239 (713)
.+.. .++||++|+++|.+|+||+|+|||||||||++|| .+|++++|++|+++|+.+++.+| ...++|
T Consensus 142 -~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~g------~~~~~~- 213 (404)
T PRK06635 142 -DGEITTLGRGGSDTTAVALAAALKADECEIYTDVDGVYTTDPRIVPKARKLDKISYEEMLELASLG------AKVLHP- 213 (404)
T ss_pred -CCCEEecCCCChHHHHHHHHHHhCCCEEEEEEcCCCCCcCCCCCCCCceECCccCHHHHHHHHHcC------CcccCH-
Confidence 1111 1589999999999999999999999999999999 88999999999999999987654 667888
Q ss_pred HHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEecC
Q 005131 240 VKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQD 280 (713)
Q Consensus 240 l~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~ 280 (713)
+++.++.++|+|++|.|++++ ..||++...
T Consensus 214 -~a~~~~~~~~i~~~i~~~~~~----------~~gT~i~~~ 243 (404)
T PRK06635 214 -RSVEYAKKYNVPLRVRSSFSD----------NPGTLITGE 243 (404)
T ss_pred -HHHHHHHHcCceEEEEcCCCC----------CCCCEEeeC
Confidence 699999999999999998755 238888764
No 183
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=1.9e-27 Score=244.83 Aligned_cols=226 Identities=26% Similarity=0.352 Sum_probs=165.4
Q ss_pred EEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccc----c--ccCccccc
Q 005131 14 IVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFA----D--LQKPQIEL 87 (713)
Q Consensus 14 iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~----~--~~~~~~~l 87 (713)
+|||||||++++. ++++++|+.+ |.++|||||||+++... ++.++... .+. + .|.+....
T Consensus 1 ~VIKlGGs~l~~~---------~~~~~~i~~l---g~~~VlVHGgg~~i~~~-~~~~gi~~-~~~~~~~G~~~Rvt~~~~ 66 (257)
T cd04251 1 IVVKIGGSVVSDL---------DKVIDDIANF---GERLIVVHGGGNYVNEY-LKRLGVEP-KFVTSPSGIRSRYTDKET 66 (257)
T ss_pred CEEEEChHHhhCh---------HHHHHHHHHc---CCCEEEECCCHHHHHHH-HHHcCCCc-EEEeCCCCCccccCCHHH
Confidence 5899999999853 5799999987 88999999999887775 44444433 332 2 23433222
Q ss_pred hHHHHHHcchHHHHHHHHHHhhhcCCccceee------ec---------c-------cccCchhHHHHHH-HHHHHHHhC
Q 005131 88 DGKACAAVGQNSIMALYDTLFSELDLTSAQLL------VT---------D-------NDFRDKEFRSQLS-ETVKSLLSL 144 (713)
Q Consensus 88 ~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~------~~---------~-------~~~~~~~~~~~~~-~~i~~~l~~ 144 (713)
-.....++++.... +.+.|.+.|+++..+. ++ . -|+++.+.+..++ +.|+.+|++
T Consensus 67 l~~~~~a~~~ln~~--iv~~L~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~v~~v~~~~i~~ll~~ 144 (257)
T cd04251 67 LEVFVMVMGLINKK--IVARLHSLGVKAVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEALLDA 144 (257)
T ss_pred HHHHHHHHHHHHHH--HHHHHHhCCCCceecccccCCEEEEEEeecccccccCcccccCCcceEEEEEEcHHHHHHHHhC
Confidence 12233333333333 4556777777763211 00 0 0233334444444 999999999
Q ss_pred CceeEEcCCCceecCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhh
Q 005131 145 RVIPVFNENDAVSTRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEI 223 (713)
Q Consensus 145 g~vpV~~g~d~v~~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~ 223 (713)
|.|||++| +.+...++.+ +|+|++|+.+|.+|+|++|+|+|||+|||++ +++|++|+++|+++++
T Consensus 145 g~vpVi~~--------~~~~~~G~~~~i~~D~~A~~lA~~L~A~~li~~tdv~Gv~~~------~~~i~~i~~~e~~~l~ 210 (257)
T cd04251 145 GYLPVVSP--------VAYSEEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYLD------GRVIERITVSDAESLL 210 (257)
T ss_pred CCeEEEeC--------cEECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhheeC------CcccCccCHHHHHHHH
Confidence 99999976 2222234444 8999999999999999999999999999974 8899999999999877
Q ss_pred hcCCCCccccCchHHHHHHHHHHHHcCCc-EEEEeCCCchhHHHHhcCCcceeEE
Q 005131 224 TFGDKSRVGRGGMTAKVKAAVNAAYAGIP-VVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 224 ~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
. +++|+|.+|++++..++++|++ ++|++++.|+++..++.|+ ||.|
T Consensus 211 ~------~~~ggm~~Kl~aa~~a~~~gv~~v~i~~g~~~~~l~~~l~g~--gT~i 257 (257)
T cd04251 211 E------KAGGGMKRKLLAAAEAVEGGVREVVIGDARADSPISSALNGG--GTVI 257 (257)
T ss_pred h------hCCCchHHHHHHHHHHHHcCCCEEEEecCCCccHHHHHHcCC--CcCC
Confidence 3 5799999999999999999997 9999999999999998874 7753
No 184
>cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP). The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th
Probab=99.95 E-value=6.6e-27 Score=239.56 Aligned_cols=232 Identities=17% Similarity=0.178 Sum_probs=172.1
Q ss_pred EEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHHHH
Q 005131 15 VVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKACAA 94 (713)
Q Consensus 15 ViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 94 (713)
|||+|||.+.+. +.+++++|+.+++.|.++||||||++++++.+ +.++.......++|.++.+--.....+
T Consensus 2 ViKiGG~~~~~~--------l~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~-~~~gi~~~~~~g~RvT~~~~l~~v~~a 72 (248)
T cd04252 2 VIKVGGAIIEDD--------LDELAASLSFLQHVGLYPIVVHGAGPQLNEEL-EAAGVEPEYVDGLRVTDPETLAVARKV 72 (248)
T ss_pred EEEEChhhhhcc--------HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHH-HHcCCCcEeeCCcccCCHHHHHHHHHH
Confidence 899999999862 67999999999999999999999999988874 445554434445666654322223333
Q ss_pred cchHHHHHHHHHHhhhcCCccce----eee----cccccCchhHHHHHH-HHHHHHHhCCceeEEcCCCceecCCCcccC
Q 005131 95 VGQNSIMALYDTLFSELDLTSAQ----LLV----TDNDFRDKEFRSQLS-ETVKSLLSLRVIPVFNENDAVSTRKAPYED 165 (713)
Q Consensus 95 ~g~~~~~~l~~~~l~~~gi~~~~----~~~----~~~~~~~~~~~~~~~-~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~ 165 (713)
+++.. ..+.+.|.+.|+++.. .+. ...|+++.+....++ +.|+.+|+.|+|||++| ++ ...
T Consensus 73 l~~vn--~~iv~~l~~~g~~a~~l~~~~~~a~~~~~~d~g~~G~v~~i~~~~i~~~L~~g~IPVi~p-~~-------~~~ 142 (248)
T cd04252 73 FLEEN--LKLVEALERNGARARPITSGVFEAEYLDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTS-LA-------ETP 142 (248)
T ss_pred HHHHH--HHHHHHHHhCCCCcccccCceEEEEECcCccCCccCceeeECHHHHHHHHHCCCeEEECC-ce-------ECC
Confidence 33222 2234445566655432 111 124677777777775 99999999999999997 22 222
Q ss_pred CCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeec-cccchhhhcCCCCccccCchHHHHHHH
Q 005131 166 SSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVK-ERHQGEITFGDKSRVGRGGMTAKVKAA 243 (713)
Q Consensus 166 ~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~-~e~~~~~~~~~~~~~~~g~m~~Kl~aa 243 (713)
.++.+ +|+|.+|+.+|.+|+|++|+|+|||+|||++ ++++|++|+. ++.+++++.+ +++|||++||+++
T Consensus 143 ~g~~~nvnaD~~A~~lA~aL~a~kli~ltdv~GV~~~-----~g~~i~~i~~~~~~~~l~~~~----~vtgGM~~Kl~~~ 213 (248)
T cd04252 143 SGQLLNVNADVAAGELARVLEPLKIVFLNETGGLLDG-----TGKKISAINLDEEYDDLMKQP----WVKYGTKLKIKEI 213 (248)
T ss_pred CCCEEEECHHHHHHHHHHHcCCCeEEEEECCcccCCC-----CCCcccccCHHHHHHHHHHcC----CcCCchHHHHHHH
Confidence 44445 9999999999999999999999999999975 4889999996 4677777654 7999999999999
Q ss_pred HHHHHc--CCc-EEEEeCCCchhH-HHHhcCCcceeEE
Q 005131 244 VNAAYA--GIP-VVITSGYSDENI-LKVLQGERIGTLF 277 (713)
Q Consensus 244 ~~a~~~--gv~-v~I~~g~~~~~l-~~~~tge~iGT~i 277 (713)
..+.+. ++. ++|++ ++++ .++++.+..||.+
T Consensus 214 ~~~~~~~~~~~~v~i~~---~~~ll~elf~~~g~GT~i 248 (248)
T cd04252 214 KELLDTLPRSSSVSITS---PDDLQKELFTHSGAGTLI 248 (248)
T ss_pred HHHHHhCCCceEEEEEC---CchHHHHHhcCCCCCccC
Confidence 999887 444 88888 7777 4788888889864
No 185
>TIGR00761 argB acetylglutamate kinase. This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model.
Probab=99.95 E-value=5.1e-27 Score=238.86 Aligned_cols=216 Identities=26% Similarity=0.340 Sum_probs=156.2
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCcccc-chHHH
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIE-LDGKA 91 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~ 91 (713)
++||||||+++.++ +.+++++|+.+++.|.++||||||++.+.. +++..+.......+.+..... +....
T Consensus 1 ~~ViK~GGs~l~~~--------~~~~~~~i~~l~~~g~~~VlVhggg~~~~~-~~~~~~~~~~~~~g~r~t~~~~~~~~~ 71 (231)
T TIGR00761 1 TIVIKIGGAAISDL--------LEAFASDIAFLRAVGIKPVIVHGGGPEINE-LLEALGIPPEFKNGLRVTDKETLEVVE 71 (231)
T ss_pred CEEEEEChHHHhcc--------HHHHHHHHHHHHHcCCCEEEEcCCcHHHHH-HHHHcCCCCEecCCCccCCHHHHHHHH
Confidence 58999999999873 679999999999999999999888766555 455444322122223332211 11111
Q ss_pred HHHcchHHHHHHHHHHhhhcCCcccee------eecc-----cccCchhHHHHHH-HHHHHHHhCCceeEEcCCCceecC
Q 005131 92 CAAVGQNSIMALYDTLFSELDLTSAQL------LVTD-----NDFRDKEFRSQLS-ETVKSLLSLRVIPVFNENDAVSTR 159 (713)
Q Consensus 92 ~~~~g~~~~~~l~~~~l~~~gi~~~~~------~~~~-----~~~~~~~~~~~~~-~~i~~~l~~g~vpV~~g~d~v~~~ 159 (713)
....|+.. ..+.+.|.+.|+++..+ +++. .++++.+....+. +.|+.+|+.|.|||++|
T Consensus 72 ~~~~g~~~--~~i~~~L~~~G~~a~~l~~~~~~~it~~~~~~~~~~~~g~i~~i~~~~i~~~l~~g~IPVi~~------- 142 (231)
T TIGR00761 72 MVLIGQVN--KELVALLNKHGINAIGLTGGDGQLFTARSLDKEDLGYVGEIKKVNKALLEALLKAGYIPVISS------- 142 (231)
T ss_pred HHHhcchH--HHHHHHHHhCCCCcccccCCCCCEEEEEECCCccCCcccceEEEcHHHHHHHHHCCCeEEECC-------
Confidence 12233333 33455778888877533 3333 2344455554444 99999999999999997
Q ss_pred CCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHH
Q 005131 160 KAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTA 238 (713)
Q Consensus 160 ~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~ 238 (713)
.+....++.+ +|+|++|+.||.+|+|++|+|+|||||||++|| +++|++|+++|+.+++..+ +++|+|.+
T Consensus 143 -~~~~~~g~~~~l~sD~~A~~lA~~l~A~~li~ltdv~Gv~~~d~----~~~i~~i~~~e~~~l~~~~----~~tggm~~ 213 (231)
T TIGR00761 143 -LALTAEGQALNVNADTAAGALAAALGAEKLVLLTDVPGILNGDG----QSLISEIPLEEIEQLIEQG----IITGGMIP 213 (231)
T ss_pred -CccCCCCcEEEeCHHHHHHHHHHHcCCCEEEEEECCCCeecCCC----CeeccccCHHHHHHHHHcC----CCCCchHH
Confidence 1122233333 999999999999999999999999999999976 5799999999999988765 68999999
Q ss_pred HHHHHHHHHHcCCc-EEE
Q 005131 239 KVKAAVNAAYAGIP-VVI 255 (713)
Q Consensus 239 Kl~aa~~a~~~gv~-v~I 255 (713)
||+++..+.++|++ +||
T Consensus 214 Kl~~a~~a~~~gv~~v~i 231 (231)
T TIGR00761 214 KVNAALEALRGGVKSVHI 231 (231)
T ss_pred HHHHHHHHHHcCCCEEEC
Confidence 99999999999998 664
No 186
>cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH). These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act
Probab=99.95 E-value=8.6e-27 Score=242.81 Aligned_cols=232 Identities=23% Similarity=0.298 Sum_probs=179.0
Q ss_pred EEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcc-------cccccCc---
Q 005131 14 IVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSS-------FADLQKP--- 83 (713)
Q Consensus 14 iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~-------~~~~~~~--- 83 (713)
.|+|||||++.+.+ .++++++.|.... .+.++++|+|+.+++++.+++........ +..++..
T Consensus 2 ~V~KFGGtSv~~~~------~i~~v~~iI~~~~-~~~~~vvVvSA~~gvTd~L~~~~~~~~~~~~~~~~~l~~i~~~h~~ 74 (294)
T cd04257 2 KVLKFGGTSLANAE------RIRRVADIILNAA-KQEQVAVVVSAPGKVTDLLLELAELASSGDDAYEDILQELESKHLD 74 (294)
T ss_pred EEEEeCccccCCHH------HHHHHHHHHHhhc-cCCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Confidence 69999999999854 7999999998764 46789999999999999987654321100 0000000
Q ss_pred -------------------------------------cccchHHHHHHcchHHHHHHHHHHhhhcCCccc-----eeeec
Q 005131 84 -------------------------------------QIELDGKACAAVGQNSIMALYDTLFSELDLTSA-----QLLVT 121 (713)
Q Consensus 84 -------------------------------------~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~~~~ 121 (713)
......+.+.+.|+..+..++...|++.|+++. +++++
T Consensus 75 ~~~~l~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t 154 (294)
T cd04257 75 LITELLSGDAAAELLSALGNDLEELKDLLEGIYLLGELPDSIRAKVLSFGERLSARLLSALLNQQGLDAAWIDARELIVT 154 (294)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhhhheeHHHHHHHHHHHHHHHhCCCCeEEEchHHeeEe
Confidence 001223567788999999999999999999885 44677
Q ss_pred ccccCchhHHHH-HHHHHHHHHhC-CceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEEEEeec
Q 005131 122 DNDFRDKEFRSQ-LSETVKSLLSL-RVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLLILLSD 194 (713)
Q Consensus 122 ~~~~~~~~~~~~-~~~~i~~~l~~-g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~li~~Td 194 (713)
+.++........ ..+.++.++.. +.|||++|+-+ .+..|.. ++||++|+.+|..|+|+.|++|||
T Consensus 155 ~~~~~~a~~~~~~~~~~l~~~~~~~~~v~Vv~Gfig--------~~~~G~~ttlGRGGSD~~A~~lA~~l~a~~l~i~td 226 (294)
T cd04257 155 DGGYLNAVVDIELSKERIKAWFSSNGKVIVVTGFIA--------SNPQGETTTLGRNGSDYSAAILAALLDADQVEIWTD 226 (294)
T ss_pred cCCCCceEechHhhHHHHHHHHhcCCCEEEecCccc--------CCCCCCEEECCCCchHHHHHHHHHHhCCCEEEEEeC
Confidence 777665554332 24677777776 99999998222 2222222 789999999999999999999999
Q ss_pred CCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcc
Q 005131 195 VEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERI 273 (713)
Q Consensus 195 V~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~i 273 (713)
|||||++|| .+|++++|++|+++|+.++..+ +++.+|| +++.++.++|||++|.|+++| +..
T Consensus 227 VdGvyt~DP~~~~~A~~i~~is~~ea~~l~~~------Gakv~h~--~~~~~a~~~~Ipi~i~~~~~p---------~~~ 289 (294)
T cd04257 227 VDGVYSADPRKVKDARLLPSLSYQEAMELSYF------GAKVLHP--KTIQPVAKKNIPILIKNTFNP---------EAP 289 (294)
T ss_pred CCccCCCCCCCCCCCeEeceeCHHHHHHHHhC------CCcccCH--HHHHHHHHCCCCEEEeeCCCC---------CCC
Confidence 999999999 8899999999999999998765 4889999 699999999999999999998 355
Q ss_pred eeEE
Q 005131 274 GTLF 277 (713)
Q Consensus 274 GT~i 277 (713)
||+|
T Consensus 290 GT~I 293 (294)
T cd04257 290 GTLI 293 (294)
T ss_pred CCEe
Confidence 8876
No 187
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=99.94 E-value=4.3e-27 Score=240.37 Aligned_cols=222 Identities=15% Similarity=0.099 Sum_probs=172.8
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
++.+|||+||+++.+++ .++.++++|+.+++.|.++||||||+++++..+. ...+... +.
T Consensus 35 ~~f~VIK~GG~~~~~~~------~~~~l~~dla~L~~lGl~~VlVHGggp~i~~~l~------~~~~~~~--------~~ 94 (271)
T cd04236 35 PAFAVLEVDHSVFRSLE------MVQSLSFGLAFLQRMDMKLLVVMGLSAPDGTNMS------DLELQAA--------RS 94 (271)
T ss_pred CCEEEEEEChhhhcCch------hHHHHHHHHHHHHHCCCeEEEEeCCChHHhhhhc------CCcchhe--------eh
Confidence 57899999999998655 6889999999999999999999999999998753 1112111 11
Q ss_pred HHHHcchHHHHHHHHHHhhhcCCcccee-----eec---ccccCchhHHHHHH-HHHHHHHhCCceeEEcCCCceecCCC
Q 005131 91 ACAAVGQNSIMALYDTLFSELDLTSAQL-----LVT---DNDFRDKEFRSQLS-ETVKSLLSLRVIPVFNENDAVSTRKA 161 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~gi~~~~~-----~~~---~~~~~~~~~~~~~~-~~i~~~l~~g~vpV~~g~d~v~~~~~ 161 (713)
.....+.. +.+.|++.|+++..+ ++. ..+++..|.+..++ +.|+.+|++|+|||++| .
T Consensus 95 v~~~~n~~-----Lv~~L~~~G~~A~gl~g~~~~i~a~~~~d~g~vG~V~~Vd~~~I~~lL~~g~IPVisp--------l 161 (271)
T cd04236 95 RLVKDCKT-----LVEALQANSAAAHPLFSGESVLQAEEPEPGASKGPSVSVDTELLQWCLGSGHIPLVCP--------I 161 (271)
T ss_pred hHHHHHHH-----HHHHHHhCCCCeeeecCccceEEEEEcccCCccceEEEECHHHHHHHHhCCCeEEECC--------c
Confidence 11122222 333344555544221 111 13555677777776 99999999999999997 2
Q ss_pred cccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeec-cccchhhhcCCCCccccCch---
Q 005131 162 PYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVK-ERHQGEITFGDKSRVGRGGM--- 236 (713)
Q Consensus 162 ~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~-~e~~~~~~~~~~~~~~~g~m--- 236 (713)
+++..++.+ +|+|.+|+.||.+|+|++|+|+||++|||++ ++++|++|+. +|.+++++.+ .+++||
T Consensus 162 g~~~~G~~~NiNaD~~A~~lA~aL~A~KLIfltd~~GV~~~-----~g~lI~~l~~~~e~~~li~~g----~i~gGm~~k 232 (271)
T cd04236 162 GETSSGRSVSLDSSEVTTAIAKALQPIKVIFLNRSGGLRDQ-----KHKVLPQVHLPADLPSLSDAE----WLSETEQNR 232 (271)
T ss_pred eECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcceECC-----CCCCccccCcHHHHHHHHhCC----EEcCCeeec
Confidence 233355556 9999999999999999999999999999975 4899999995 9999999987 899999
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCchhH-HHHhcCCcceeEE
Q 005131 237 TAKVKAAVNAAYAGIPVVITSGYSDENI-LKVLQGERIGTLF 277 (713)
Q Consensus 237 ~~Kl~aa~~a~~~gv~v~I~~g~~~~~l-~~~~tge~iGT~i 277 (713)
+||+++++.++..|+.|+|++ |+.+ .+++|.+..||.+
T Consensus 233 i~ki~~~l~~l~~g~sv~I~~---~~~ll~elft~~g~GT~~ 271 (271)
T cd04236 233 IQDIATLLNALPSMSSAVITS---AETLLTELFSHKGSGTLF 271 (271)
T ss_pred hHHHHHHHHhcccCCeEEEeC---hHHHHHHHhccCCCCCcC
Confidence 999999999999999999998 7766 6999999889863
No 188
>PRK07431 aspartate kinase; Provisional
Probab=99.94 E-value=1.5e-26 Score=266.00 Aligned_cols=233 Identities=22% Similarity=0.303 Sum_probs=178.1
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
|+++|+||||+++.+.+ .+++++++|+.+.+.|+++||||||++.+++.+........ . .. ..-..+
T Consensus 1 m~~iViKfGGss~~~~~------~i~~~a~~I~~~~~~g~~vvvV~sa~g~~t~~l~~~~~~~t----~--~~-~~~~~~ 67 (587)
T PRK07431 1 MALIVQKFGGTSVGSVE------RIQAVAQRIARTKEAGNDVVVVVSAMGKTTDELVKLAKEIS----S--NP-PRREMD 67 (587)
T ss_pred CCeEEEEECchhcCCHH------HHHHHHHHHHHHHHCCCCEEEEECCCCchhHHHHHHHHHhc----c--CC-CHHHHH
Confidence 46899999999998744 79999999999999999999999988888887654432211 0 00 111235
Q ss_pred HHHHcchHHHHHHHHHHhhhcCCcccee------eecccccCchhHHHHH-HHHHHHHHhCCceeEEcCCCceecCCCcc
Q 005131 91 ACAAVGQNSIMALYDTLFSELDLTSAQL------LVTDNDFRDKEFRSQL-SETVKSLLSLRVIPVFNENDAVSTRKAPY 163 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~-~~~i~~~l~~g~vpV~~g~d~v~~~~~~~ 163 (713)
.+.+.|+..+..++...|.+.|+++..+ ++++..++.. .+..+ .+.++.+++.|.|||++|+.....
T Consensus 68 ~~ls~Ge~~s~~l~~~~l~~~gi~a~~l~~~~~~~~~~~~~~~~-~i~~~~~~~l~~~l~~g~vpVv~g~~g~~~----- 141 (587)
T PRK07431 68 MLLSTGEQVSIALLSMALHELGQPAISLTGAQVGIVTESEHGRA-RILEIKTDRIQRHLDAGKVVVVAGFQGISL----- 141 (587)
T ss_pred HHHHHhHHHHHHHHHHHHHHCCCCeEEechhHcCeEecCCCCce-eeeeccHHHHHHHHhCCCeEEecCCcCCCC-----
Confidence 7778888888888888899999986422 3444443322 22222 378999999999999997221111
Q ss_pred cCCCCc----ccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHH
Q 005131 164 EDSSGI----FWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTA 238 (713)
Q Consensus 164 ~~~~g~----~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~ 238 (713)
...+.. .++||++|+.||.+|+|++|+|||||||||++|| .+|++++|++|+++|+.+++.+| +++|||
T Consensus 142 ~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~el~~~G------~~v~~~ 215 (587)
T PRK07431 142 SSNLEITTLGRGGSDTSAVALAAALGADACEIYTDVPGVLTTDPRLVPEAQLMDEISCDEMLELASLG------ASVLHP 215 (587)
T ss_pred CCCCCEeecCCCchHHHHHHHHHHcCCCEEEEEeCCCccCcCCCCCCCCCeECCCcCHHHHHHHHhCC------CceEhH
Confidence 001111 1789999999999999999999999999999999 88999999999999999988754 789998
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEecC
Q 005131 239 KVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQD 280 (713)
Q Consensus 239 Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~ 280 (713)
+++.++.++|+|++|.+++. +..||+|.+.
T Consensus 216 --~a~~~~~~~~i~i~i~~~~~----------~~~GT~i~~~ 245 (587)
T PRK07431 216 --RAVEIARNYGVPLVVRSSWS----------DAPGTLVTSP 245 (587)
T ss_pred --HHHHHHHHcCCcEEEecCCC----------CCCCeEEEeC
Confidence 79999999999999999762 2349999764
No 189
>PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families. In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A ....
Probab=99.94 E-value=5.4e-27 Score=241.02 Aligned_cols=230 Identities=28% Similarity=0.365 Sum_probs=159.7
Q ss_pred ceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCcccc----c
Q 005131 12 KRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIE----L 87 (713)
Q Consensus 12 ~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~----l 87 (713)
|++|||||||++++++ .+ +.+++++|+.+.+.|.++||||||++.++.. ++.++.........+.+... .
T Consensus 1 k~~ViK~GGs~l~~~~----~~-~~~~~~~i~~l~~~g~~vvvV~g~g~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~ 74 (242)
T PF00696_consen 1 KTIVIKLGGSSLTDKD----EE-LRELADDIALLSQLGIKVVVVHGGGSFTDEL-LEKYGIEPKFVDGSRVTDIETGLII 74 (242)
T ss_dssp SEEEEEE-HHGHSSHS----HH-HHHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHHCTHTTSEETHHCHBHHHHHHHH
T ss_pred CeEEEEECchhhCCch----HH-HHHHHHHHHHHHhCCCeEEEEECChhhcCch-HHhccCCcccchhhhhhhhhhhHHH
Confidence 6899999999999853 23 8899999999999999999999988655554 55544433222222222211 1
Q ss_pred hHHHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhH--HHHHHHHHHHHHhCCceeEEcCCCceecCCCcccC
Q 005131 88 DGKACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEF--RSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYED 165 (713)
Q Consensus 88 ~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~--~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~ 165 (713)
.......+++......+...+...+.........+.+...... .....+.++.+|++|.|||++|+-. ...
T Consensus 75 ~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ipVv~g~~~-------~~~ 147 (242)
T PF00696_consen 75 TMAAAAELNRDALLDEIVSAGERLGAHAVGLSLSDGGISAAKRDAREVDKEAIRELLEQGIIPVVSGFAG-------IDD 147 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTHHEEEHHHTGGTEEEEEEESSEEHHHHHHHHHHTTSEEEEESEEE-------EET
T ss_pred HHHHhhccccchhHHHHHHhhhhhhHHHHhhhhhcccchhhhhhhhhhHHHHHHHHHHCCCEEEEeCCcc-------cCC
Confidence 1222333344333334445566666554333222221111111 0122477999999999999997111 112
Q ss_pred CCCc---c-cchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHH
Q 005131 166 SSGI---F-WDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKV 240 (713)
Q Consensus 166 ~~g~---~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl 240 (713)
.+.. . +++|++|+.||.+|+|++|+|+|||||||++|| .+|++++|++|+++|+.+++.. ..++++||.+|+
T Consensus 148 ~g~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~~~l~~~---~~~~~~gm~~k~ 224 (242)
T PF00696_consen 148 DGEVTTLGNVSSDYIAALLAAALGADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEAEELASK---SGDVTGGMKPKH 224 (242)
T ss_dssp TSTEEEEEEETHHHHHHHHHHHTTCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHHHHHHHH---TTSSTTTHHHHH
T ss_pred CCCcccCCCCCHHHHHHHHHHHhCchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHHHHHHhc---CCCCCCCHHHHH
Confidence 3333 3 999999999999999999999999999999999 7899999999999999998732 238899999999
Q ss_pred HHHHHHHHc-CCcEEEEe
Q 005131 241 KAAVNAAYA-GIPVVITS 257 (713)
Q Consensus 241 ~aa~~a~~~-gv~v~I~~ 257 (713)
+++..+++. +++|+|+|
T Consensus 225 ~~a~~~~~~~~~~v~I~n 242 (242)
T PF00696_consen 225 PAALEAAEEGGIPVHIIN 242 (242)
T ss_dssp HHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHcCCCcEEEeC
Confidence 999998886 67899986
No 190
>cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH). These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-
Probab=99.94 E-value=1.4e-26 Score=241.02 Aligned_cols=232 Identities=24% Similarity=0.325 Sum_probs=177.7
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcc-------cccccCc--
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSS-------FADLQKP-- 83 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~-------~~~~~~~-- 83 (713)
+.|+||||+++.+.+ .++++++.|.... +.++++|+|+.+.+++.+++........ +..+...
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~iI~~~~--~~~~vvVvSA~~gvTd~L~~~~~~a~~~~~~~~~~l~~i~~~h~ 72 (293)
T cd04243 1 MKVLKFGGTSVASAE------RIRRVADIIKSRA--SSPVLVVVSALGGVTNRLVALAELAASGDDAQAIVLQEIRERHL 72 (293)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHHHhc--CCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Confidence 479999999999854 7889998887643 7789999999999999987654321100 0000000
Q ss_pred --------------------------------------cccchHHHHHHcchHHHHHHHHHHhhhcCCccc-----eeee
Q 005131 84 --------------------------------------QIELDGKACAAVGQNSIMALYDTLFSELDLTSA-----QLLV 120 (713)
Q Consensus 84 --------------------------------------~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~~~ 120 (713)
........+.+.|+..+..++...|++.|+++. .++.
T Consensus 73 ~~~~~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~s~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~ 152 (293)
T cd04243 73 DLIKELLSGESAAELLAALDSLLERLKDLLEGIRLLGELSDKTRAEVLSFGELLSSRLMSAYLQEQGLPAAWLDARELLL 152 (293)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCchhhhHheeHHHHHHHHHHHHHHHhCCCCcEEEcHHHeEE
Confidence 001223567888999999999999999999885 3456
Q ss_pred cccccCchhHHHHH-HHHHHHHHhC-CceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEEEEee
Q 005131 121 TDNDFRDKEFRSQL-SETVKSLLSL-RVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLLILLS 193 (713)
Q Consensus 121 ~~~~~~~~~~~~~~-~~~i~~~l~~-g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~li~~T 193 (713)
++.++......... .+.++.+++. +.|||++|+-+ .+..|.. ++||++|+.+|..|+|++|++||
T Consensus 153 t~~~~~~~~~~~~~s~~~~~~~~~~~~~v~Vv~Gfig--------~~~~G~~ttLGRggsD~~A~~~a~~l~a~~~~i~t 224 (293)
T cd04243 153 TDDGFLNAVVDLKLSKERLAQLLAEHGKVVVTQGFIA--------SNEDGETTTLGRGGSDYSAALLAALLDAEEVEIWT 224 (293)
T ss_pred ecCCCCcchhhhHHHHHHHHHHHhcCCCEEEecCccc--------cCCCCCEEEeCCCCcHHHHHHHHHHcCCCEEEEEe
Confidence 66666554433222 3678888887 99999997222 2222222 77999999999999999999999
Q ss_pred cCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCc
Q 005131 194 DVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGER 272 (713)
Q Consensus 194 dV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~ 272 (713)
||||||++|| .+|++++|++|+++|+.++..+| +..||| +++.++++++||++|.|+++| +.
T Consensus 225 dvdGiyt~dP~~~~~a~~i~~ls~~ea~~l~~~G------akvl~p--~ai~~a~~~~i~i~i~~~~~p---------~~ 287 (293)
T cd04243 225 DVDGVYTADPRKVPDARLLKELSYDEAMELAYFG------AKVLHP--RTIQPAIRKNIPIFIKNTFNP---------EA 287 (293)
T ss_pred CCCccCCCCCCCCCCCeEeceeCHHHHHHHHhCC------CcccCH--HHHHHHHHCCCcEEEecCCCC---------CC
Confidence 9999999999 88999999999999999988754 789999 699999999999999999999 35
Q ss_pred ceeEE
Q 005131 273 IGTLF 277 (713)
Q Consensus 273 iGT~i 277 (713)
.||+|
T Consensus 288 ~GT~I 292 (293)
T cd04243 288 PGTLI 292 (293)
T ss_pred CCCEe
Confidence 58876
No 191
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.94 E-value=5.2e-26 Score=233.08 Aligned_cols=229 Identities=21% Similarity=0.240 Sum_probs=161.7
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
...+|||+|||+|++++ .+.+++++++|+++++ +++++||||||... |.+...... .+. ....++..
T Consensus 30 ~~~~ViKiGGSvitdk~----~~~i~~la~~i~~~~~-~~~vilV~GGG~~~-r~~~~~~~~-----~g~--~~~~~~~~ 96 (262)
T cd04255 30 PDLNVVKIGGQSIIDRG----AEAVLPLVEEIVALRP-EHKLLILTGGGTRA-RHVYSIGLD-----LGM--PTGVLAKL 96 (262)
T ss_pred CCcEEEEeccceecCCc----HHHHHHHHHHHHHHhC-CCcEEEEECCHHHH-HHHHHHHHH-----cCC--CchHHHHH
Confidence 35699999999999876 5679999999999876 68999999998655 543321110 011 11122234
Q ss_pred HHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCC--
Q 005131 91 ACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSG-- 168 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g-- 168 (713)
..++.++..+. ...+|...|++. ++..++ +.++.+|+.|+|||++|++.+...... ..+|
T Consensus 97 ~~aa~~ln~lv--~~~~l~~~g~~~----i~~~~~----------~~l~~lL~~g~vPVi~g~~~~~~~~i~--~~~g~~ 158 (262)
T cd04255 97 GASVSEQNAEM--LATLLAKHGGSK----VGHGDL----------LQLPTFLKAGRAPVISGMPPYGLWEHP--AEEGRI 158 (262)
T ss_pred HHHHHHHHHHH--HHHHHHHcCCCc----cccccH----------HHHHHHHHCCCeEEEeCCcCCCeeeec--CCCccC
Confidence 44455554332 245566777654 222111 348899999999999986543321111 1223
Q ss_pred cccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHH
Q 005131 169 IFWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAA 247 (713)
Q Consensus 169 ~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~ 247 (713)
+++|+|++|+++|.+|+|++|+++|||||||++|| .+|++++|++|+++++.++..... ..+++|..|+++ .
T Consensus 159 ~~~~~D~~Aa~lA~~l~ad~li~~TdVdGVy~~dP~~~~~a~~i~~i~~~~~~~~~~~~~---~~~~~~~~~l~a----a 231 (262)
T cd04255 159 PPHRTDVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKAEFIPEISAAELLKKDLDDL---VLERPVLDLLQN----A 231 (262)
T ss_pred CCCCcHHHHHHHHHHhCCCEEEEEeccCeeECCCCCCCCCCeEccEeCHHHHHHHhcCCC---CCcHHHHHHHHH----h
Confidence 35899999999999999999999999999999999 789999999999877766531111 135566665554 3
Q ss_pred HcCCcEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 248 YAGIPVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 248 ~~gv~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
+..++++|++++.|+++.+++.|+..||.+
T Consensus 232 ~~~~~v~I~~g~~~~~L~~~l~g~~~GT~i 261 (262)
T cd04255 232 RHVKEVQIVNGLVPGNLTRALRGEHVGTII 261 (262)
T ss_pred CCCCcEEEEeCCCCCHHHHHHcCCCCceEe
Confidence 434689999999999999999999999986
No 192
>cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria. Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine.
Probab=99.94 E-value=3.8e-26 Score=237.80 Aligned_cols=234 Identities=19% Similarity=0.219 Sum_probs=176.3
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCc-c----cccccC-----
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINS-S----FADLQK----- 82 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~-~----~~~~~~----- 82 (713)
++|+||||+++.+.+ .++++++.|+...+.+.++++|+|+.+.+++.+++....... . +..+..
T Consensus 1 ~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vVVVSA~~gvTd~L~~~~~~a~~~~~~~~l~~i~~~~~~~ 74 (295)
T cd04259 1 WVVLKFGGTSVSSRA------RWDTIAKLAQKHLNTGGQPLIVCSALSGISNKLEALIDQALLDEHHSLFNAIQSRHLNL 74 (295)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHHHHhhcCCCEEEEEeCCCCCchHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 469999999999854 789999999876567788999999999999987664321100 0 000000
Q ss_pred ------------------------------ccccchHHHHHHcchHHHHHHHHHHhhhcCCccc-----eeeecccccCc
Q 005131 83 ------------------------------PQIELDGKACAAVGQNSIMALYDTLFSELDLTSA-----QLLVTDNDFRD 127 (713)
Q Consensus 83 ------------------------------~~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~~~~~~~~~~ 127 (713)
.........+.+.|+..+..++...|++.|+++. ++++++.+++.
T Consensus 75 ~~~L~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~~~~~~~~ 154 (295)
T cd04259 75 AEQLEVDADALLANDLAQLQRWLTGISLLKQASPRTRAEVLALGELMSTRLGAAYLEAQGLKVKWLDARELLTATPTLGG 154 (295)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcHHHheeecccccc
Confidence 0001123567889999999999999999999885 34556655532
Q ss_pred -------hhH-HHHHHHHHHHHHhC-CceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEEEEee
Q 005131 128 -------KEF-RSQLSETVKSLLSL-RVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLLILLS 193 (713)
Q Consensus 128 -------~~~-~~~~~~~i~~~l~~-g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~li~~T 193 (713)
... .....+.|...++. +.|||++|+ .+.+..|.. ++||++|+.+|.+|+|++|++||
T Consensus 155 ~~~~~~~a~v~~~~~~~~l~~~l~~~~~v~Vv~GF--------ig~~~~G~~ttLGrggsD~tA~~lA~~l~A~~l~i~T 226 (295)
T cd04259 155 ETMNYLSARCESEYADALLQKRLADGAQLIITQGF--------IARNAHGETVLLGRGGSDTSAAYFAAKLQAARCEIWT 226 (295)
T ss_pred cccccccceehhhhhHHHHHHHHhcCCceeEeCCc--------eeeCCCCCEEEECCCChHHHHHHHHHHcCCCEEEEEE
Confidence 111 11223556666665 679999882 222233332 89999999999999999999999
Q ss_pred cCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCc
Q 005131 194 DVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGER 272 (713)
Q Consensus 194 dV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~ 272 (713)
||||||++|| .+|++++|++|+++|+.+++.+| ...||| +++.+++++|||++|.|+++| +.
T Consensus 227 dV~Gvyt~DP~~~~~a~~i~~ls~~ea~~l~~~G------a~v~h~--~a~~~a~~~~ipi~i~~~~~p---------~~ 289 (295)
T cd04259 227 DVPGLFTANPHEVPHARLLKRLDYDEAQEIATMG------AKVLHP--RCIPPARRANIPMVVRSTERP---------EL 289 (295)
T ss_pred CCCccccCCCCCCCCCeEeceeCHHHHHHHHHcC------CcccCH--HHHHHHHHCCCCEEEEeCCCC---------CC
Confidence 9999999999 88999999999999999988754 688999 699999999999999999998 35
Q ss_pred ceeEE
Q 005131 273 IGTLF 277 (713)
Q Consensus 273 iGT~i 277 (713)
.||+|
T Consensus 290 ~GT~I 294 (295)
T cd04259 290 SGTLI 294 (295)
T ss_pred CCcEe
Confidence 58876
No 193
>PRK08373 aspartate kinase; Validated
Probab=99.94 E-value=3.5e-26 Score=241.27 Aligned_cols=226 Identities=21% Similarity=0.248 Sum_probs=172.6
Q ss_pred hccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcc-c----------
Q 005131 9 KDVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSS-F---------- 77 (713)
Q Consensus 9 ~~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~-~---------- 77 (713)
+|.+++|+|||||++.+ .++++++.|+.. ..|+++++|+|+.+.+|+.+++........ +
T Consensus 1 ~~~~m~V~KFGGsSv~~--------~~~~v~~ii~~~-~~~~~vvVVVSA~~gvTd~L~~l~~~~~~~~l~~i~~~h~~~ 71 (341)
T PRK08373 1 MVEKMIVVKFGGSSVRY--------DFEEALELVKYL-SEENEVVVVVSALKGVTDKLLKLAETFDKEALEEIEEIHEEF 71 (341)
T ss_pred CCCCCEEEEECCcchHh--------HHHHHHHHHHHH-hcCCCEEEEecCCchHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 35677999999999977 367888888754 557899999999999999987654321100 0
Q ss_pred -ccc------------------cCccccchHHHHHHcchHHHHHHHHHHhhhcCCccc-----eeeecccccCchhHH--
Q 005131 78 -ADL------------------QKPQIELDGKACAAVGQNSIMALYDTLFSELDLTSA-----QLLVTDNDFRDKEFR-- 131 (713)
Q Consensus 78 -~~~------------------~~~~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~~~~~~~~~~~~~~-- 131 (713)
..+ .........+.+.++|+..+..++...|++.|+++. +++.+++++++....
T Consensus 72 ~~~L~~~~~~~~~~l~~~~~~~~~~~~~~~~D~ils~GE~lSa~lla~~L~~~Gi~a~~l~~~~~i~t~~~~~~a~i~~~ 151 (341)
T PRK08373 72 AKRLGIDLEILSPYLKKLFNSRPDLPSEALRDYILSFGERLSAVLFAEALENEGIKGKVVDPWEILEAKGSFGNAFIDIK 151 (341)
T ss_pred HHHhccchhhHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeHHHheeecCCccceeechh
Confidence 000 000001224688999999999999999999999885 345666666554321
Q ss_pred --HHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEEEEeecCCccccCCC-
Q 005131 132 --SQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLLILLSDVEGLYSGPP- 203 (713)
Q Consensus 132 --~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP- 203 (713)
....+.+..+++.|.|||++|+-. +..|.. ++||++|+.+|.+|+|++++|||||||||++||
T Consensus 152 ~s~~~~~~l~~~l~~g~VpVv~Gf~g---------~~~G~~ttLGRGGSD~tA~~lA~~L~A~~v~i~TDVdGVytaDP~ 222 (341)
T PRK08373 152 KSKRNVKILYELLERGRVPVVPGFIG---------NLNGFRATLGRGGSDYSAVALGVLLNAKAVLIMSDVEGIYTADPK 222 (341)
T ss_pred hhhhhHHHHHHHHhCCcEEEEeCCcc---------CCCCeEEEcCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCC
Confidence 111277889999999999997221 112221 689999999999999999999999999999999
Q ss_pred CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCc
Q 005131 204 SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSD 261 (713)
Q Consensus 204 ~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~ 261 (713)
.+|+|++|++||++|+.++..+ +...||| +++.++.+ +||++|.|.++|
T Consensus 223 ~v~~A~~i~~isy~Ea~ela~~------Gakvlhp--~ai~~a~~-~Ipi~v~~t~~~ 271 (341)
T PRK08373 223 LVPSARLIPYLSYDEALIAAKL------GMKALHW--KAIEPVKG-KIPIIFGRTRDW 271 (341)
T ss_pred CCCCCeEcccCCHHHHHHHHHC------cChhhhH--HHHHHHHc-CCcEEEecCCCC
Confidence 8999999999999999998764 4889999 68888988 999999998766
No 194
>PRK12354 carbamate kinase; Reviewed
Probab=99.94 E-value=7.1e-26 Score=233.02 Aligned_cols=246 Identities=25% Similarity=0.310 Sum_probs=168.9
Q ss_pred ceEEEEeCccceecCCC--ccc--HHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccc
Q 005131 12 KRIVVKVGTAVVTRSDG--RLA--LGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIEL 87 (713)
Q Consensus 12 ~~iViKlGGs~l~~~~~--~~~--~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 87 (713)
+++||||||++|.+++. +.+ .+.+++.++.|+.+.+ |+++||+||+|+|+|..+++...... . ..+.+
T Consensus 1 ~~iVialGGnal~~~~~~~~~~~~~~~v~~~a~~ia~~~~-~~~vvi~HGnGpqvG~~~~~~~~~~~-----~--~~~pl 72 (307)
T PRK12354 1 MRIVVALGGNALLRRGEPLTAENQRANIRIAAEQIAKIAR-EHELVIVHGNGPQVGLLALQNAAYKD-----V--TPYPL 72 (307)
T ss_pred CeEEEEeccHHhCCCCCCcCHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCccHHhHHHHHHHHhcC-----C--CCCCc
Confidence 47999999999998764 444 4589999999999988 99999999999999966554322211 1 12222
Q ss_pred hHHHHHHcchHHHHH--HHHHHhhhcCCcc--ceeeecccccCc-------------------------------hhHHH
Q 005131 88 DGKACAAVGQNSIMA--LYDTLFSELDLTS--AQLLVTDNDFRD-------------------------------KEFRS 132 (713)
Q Consensus 88 ~~~~~~~~g~~~~~~--l~~~~l~~~gi~~--~~~~~~~~~~~~-------------------------------~~~~~ 132 (713)
..-.+.+-|..+.+. .+.+.|.+..+.. .+.++..+|... .++++
T Consensus 73 ~~~~a~sqg~iGy~l~q~l~~~l~~~~v~tivtq~~Vd~~dpAf~~ptKpiG~~y~~~~a~~~~~e~g~~~~~dg~g~rr 152 (307)
T PRK12354 73 DVLGAETEGMIGYMLEQELGNLLPERPVATLLTQVEVDANDPAFANPTKPIGPVYDEAEAERLAAEKGWTIKPDGDYFRR 152 (307)
T ss_pred chhcccccchHHHHHHHHHHHHhcCCcceEEEEEEEEcCCCCccCCCCCCcCcccCHHHHHHHHHhcCCEEeecCCceEE
Confidence 222233444444331 1233343321111 133332222110 01111
Q ss_pred --------H-H-HHHHHHHHhCCceeEEcCCCceecCCCcccCCC---Cc--ccchhHHHHHHHhhhCCCEEEEeecCCc
Q 005131 133 --------Q-L-SETVKSLLSLRVIPVFNENDAVSTRKAPYEDSS---GI--FWDNDSLAALLALELKADLLILLSDVEG 197 (713)
Q Consensus 133 --------~-~-~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~---g~--~~~sD~~A~~lA~~l~Ad~li~~TdV~G 197 (713)
. + .+.|+.+|+.|+|||.+||..|.... .+.+ +. ++|+|.+|+.||.+|+||+|+|+|||||
T Consensus 153 Vv~SP~P~~ive~~~I~~Ll~~g~ivIa~GGGGIPV~~---~~~~~~~gv~aViD~D~~Aa~LA~~l~Ad~LiiLTdVdG 229 (307)
T PRK12354 153 VVPSPRPKRIVEIRPIRWLLEKGHLVICAGGGGIPVVY---DADGKLHGVEAVIDKDLAAALLAEQLDADLLLILTDVDA 229 (307)
T ss_pred EecCCCCcceeCHHHHHHHHHCCCEEEEeCCCccCeEe---cCCCceeeeeecCCccHHHHHHHHHcCCCEEEEEeCCcc
Confidence 1 2 38999999999999988744433211 1111 11 3789999999999999999999999999
Q ss_pred cccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCC-cEEEEeCCCchhHHHHhcCCcceeE
Q 005131 198 LYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGI-PVVITSGYSDENILKVLQGERIGTL 276 (713)
Q Consensus 198 V~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv-~v~I~~g~~~~~l~~~~tge~iGT~ 276 (713)
||+++ .+|++++|++++.+|++++ .+++|+|.||++++..+++.+. +++|.+ ++.+.+++.|+ .||.
T Consensus 230 Vy~~~-~~p~~k~i~~it~~e~~~~-------~f~~GgM~pKV~AA~~~~~~gg~~viI~~---~~~l~~al~G~-~GT~ 297 (307)
T PRK12354 230 VYLDW-GKPTQRAIAQATPDELREL-------GFAAGSMGPKVEAACEFVRATGKIAGIGS---LEDIQAILAGE-AGTR 297 (307)
T ss_pred eecCC-CCCCCeECCCCCHHHHHhh-------CCCcCChHHHHHHHHHHHHhCCCEEEECC---HHHHHHHHCCC-CceE
Confidence 99985 4678999999999988875 2789999999999999887655 588864 77888999987 6999
Q ss_pred EecC
Q 005131 277 FHQD 280 (713)
Q Consensus 277 i~~~ 280 (713)
+.++
T Consensus 298 I~~~ 301 (307)
T PRK12354 298 ISPE 301 (307)
T ss_pred EecC
Confidence 9764
No 195
>TIGR00657 asp_kinases aspartate kinase. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis.
Probab=99.94 E-value=3.5e-26 Score=254.32 Aligned_cols=243 Identities=24% Similarity=0.340 Sum_probs=185.2
Q ss_pred ceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccc-----cccCcc--
Q 005131 12 KRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFA-----DLQKPQ-- 84 (713)
Q Consensus 12 ~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~-----~~~~~~-- 84 (713)
+++|+|||||++.+.+ .++++++.|....+.|+++|+||||++++++.+++........-. .+...+
T Consensus 1 ~~~V~KFGGssv~~~~------~~~~v~~~i~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~~ 74 (441)
T TIGR00657 1 ALIVQKFGGTSVGNAE------RIRRVAKIVLKEKKKGNQVVVVVSAMAGVTDALVELAEQASPGPSKEFLEKIREKHIE 74 (441)
T ss_pred CCEEEEeCcccCCCHH------HHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 3589999999999854 799999999988788999999999999999998766433221000 000000
Q ss_pred --------------------------ccchHHHHHHcchHHHHHHHHHHhhhcCCcccee------eecccccCchh-HH
Q 005131 85 --------------------------IELDGKACAAVGQNSIMALYDTLFSELDLTSAQL------LVTDNDFRDKE-FR 131 (713)
Q Consensus 85 --------------------------~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~------~~~~~~~~~~~-~~ 131 (713)
.......+.+.|+..+..++...|++.|+++..+ +++.+++.... ..
T Consensus 75 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~ils~GE~~s~~l~~~~l~~~Gi~a~~l~~~~~~l~t~~~~~~~~~~~ 154 (441)
T TIGR00657 75 ILERLIPQAIAEELKRLLDAELVLEEKPREMDRILSFGERLSAALLSAALEELGVKAVSLLGGEAGILTDSNFGRARVII 154 (441)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhhhcCcchHhheecHHHHHHHHHHHHHHHhCCCCCEEEEcCcceEEecCCCCceeecH
Confidence 0112356678898888888999999999887433 45666665444 23
Q ss_pred HHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcc
Q 005131 132 SQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKL 210 (713)
Q Consensus 132 ~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~ 210 (713)
....+.+..+++.|.|||++|+.+... .+..+..| .++||++|+.+|.+|+|++|++||||||||++|| .+|++++
T Consensus 155 ~~~~~~l~~~l~~~~vpVv~G~~g~~~--~g~~~~lg-rggsD~~A~~lA~~l~a~~l~~~tDV~Gv~~~DP~~~~~a~~ 231 (441)
T TIGR00657 155 EILTERLEPLLEEGIIPVVAGFQGATE--KGETTTLG-RGGSDYTAALLAAALKADECEIYTDVDGIYTTDPRIVPDARR 231 (441)
T ss_pred hhhHHHHHHHHhcCCEEEEeCcEeeCC--CCCEeecC-CCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCCeE
Confidence 333488999999999999997222211 11111111 1579999999999999999999999999999999 8899999
Q ss_pred eeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEecC
Q 005131 211 IDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQD 280 (713)
Q Consensus 211 i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~ 280 (713)
|++|+++|+.+++.+| ...+|| +++.++.++++|++|.|+++| +..||+|.+.
T Consensus 232 i~~is~~ea~el~~~G------~~v~~~--~a~~~~~~~~i~i~i~~~~~~---------~~~GT~I~~~ 284 (441)
T TIGR00657 232 IDEISYEEMLELASFG------AKVLHP--RTLEPAMRAKIPIVVKSTFNP---------EAPGTLIVAS 284 (441)
T ss_pred CCccCHHHHHHHHhcC------CcccCH--HHHHHHHHcCCeEEEecCCCC---------CCCceEEEeC
Confidence 9999999999988755 688999 699999999999999999988 3459999764
No 196
>cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII. AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits.
Probab=99.94 E-value=1e-25 Score=233.63 Aligned_cols=230 Identities=21% Similarity=0.235 Sum_probs=174.1
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcc--------cccccCcc
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSS--------FADLQKPQ 84 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~--------~~~~~~~~ 84 (713)
+.|+|||||++.+.+ .++++++.|+. .+.++|+|+|+.+.+++.+++........ +..++..+
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~ii~~---~~~~~vVVVSA~~~vTd~L~~~~~~~~~~~~~~~~~~l~~l~~~h 71 (292)
T cd04258 1 MVVAKFGGTSVADYA------AMLRCAAIVKS---DASVRLVVVSASAGVTNLLVALADAAESGEEIESIPQLHEIRAIH 71 (292)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHhc---cCCCEEEEEeCCCCchHHHHHHHHHHhcCCcchhhHHHHHHHHHH
Confidence 479999999999854 78888888874 26788999999999999977654321100 00000000
Q ss_pred -------------------------------------ccchHHHHHHcchHHHHHHHHHHhhhcCCccc-----eeeecc
Q 005131 85 -------------------------------------IELDGKACAAVGQNSIMALYDTLFSELDLTSA-----QLLVTD 122 (713)
Q Consensus 85 -------------------------------------~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~~~~~ 122 (713)
..-..+.+.+.|+..+..++...|++.|+++. ++++++
T Consensus 72 ~~~~~~L~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t~ 151 (292)
T cd04258 72 FAILNRLGAPEELRAKLEELLEELTQLAEGAALLGELSPASRDELLSFGERMSSLLFSEALREQGVPAEWFDVRTVLRTD 151 (292)
T ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHhhhccccccChHhHhHhhhHHHHHHHHHHHHHHHhCCCCeEEEchHHeEEec
Confidence 01123578889999999999999999999885 456777
Q ss_pred cccCchhH-----HHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEEEEe
Q 005131 123 NDFRDKEF-----RSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLLILL 192 (713)
Q Consensus 123 ~~~~~~~~-----~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~li~~ 192 (713)
.+++.... ..+....++.+ .++.|||++|+-. .+..|.. ++||++|+.+|..|+|+.+++|
T Consensus 152 ~~~~~a~~~~~~~~~~~~~~~~~~-~~~~v~Vv~Gf~g--------~~~~G~~ttLGrggsD~~a~~~a~~l~a~~~~i~ 222 (292)
T cd04258 152 SRFGRAAPDLNALAELAAKLLKPL-LAGTVVVTQGFIG--------STEKGRTTTLGRGGSDYSAALLAEALHAEELQIW 222 (292)
T ss_pred CCCccccccHHHHHHHHHHHHHHh-hcCCEEEECCccc--------cCCCCCEEecCCCchHHHHHHHHHHcCCCEEEEE
Confidence 77765443 22223444444 4678999998222 2222222 8899999999999999999999
Q ss_pred ecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCC
Q 005131 193 SDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGE 271 (713)
Q Consensus 193 TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge 271 (713)
|||||||++|| .+|++++|++|+|+|+.+++.+| ...||| +++.++++++||++|.|.++| +
T Consensus 223 tdv~Gv~~~dP~~~~~a~~i~~isy~Ea~ela~~G------akvlhp--~a~~~~~~~~ipi~i~~~~~p---------~ 285 (292)
T cd04258 223 TDVAGIYTTDPRICPAARAIKEISFAEAAEMATFG------AKVLHP--ATLLPAIRKNIPVFVGSSKDP---------E 285 (292)
T ss_pred ECCCccCCCCCCCCCCCeEeceeCHHHHHHHHHCC------CcccCH--HHHHHHHHcCCcEEEEeCCCC---------C
Confidence 99999999999 89999999999999999988755 799999 699999999999999999988 3
Q ss_pred cceeEE
Q 005131 272 RIGTLF 277 (713)
Q Consensus 272 ~iGT~i 277 (713)
..||+|
T Consensus 286 ~~GT~I 291 (292)
T cd04258 286 AGGTLI 291 (292)
T ss_pred CCCcee
Confidence 558876
No 197
>PRK09084 aspartate kinase III; Validated
Probab=99.93 E-value=1.1e-25 Score=249.15 Aligned_cols=235 Identities=21% Similarity=0.222 Sum_probs=181.2
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcc--c-------------
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSS--F------------- 77 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~--~------------- 77 (713)
|+|.||||+++.+.+ .++++++.|+. .+.++++|+|+.+.+|+.+++......+. .
T Consensus 1 m~V~KFGGtSv~~~e------~i~~v~~ii~~---~~~~~vvVVSA~~~~Td~L~~~~~~~~~~~~~~~~~~~i~~~h~~ 71 (448)
T PRK09084 1 LVVAKFGGTSVADFD------AMNRSADIVLS---NPNTRLVVLSASAGVTNLLVALAEGAEPGDERLALLDEIRQIQYA 71 (448)
T ss_pred CEEEEECccCcCCHH------HHHHHHHHHhc---CCCCEEEEEcCCCCchHHHHHHHHHHHcCccHHHHHHHHHHHHHH
Confidence 579999999999854 78999999875 57889999999999999987654322110 0
Q ss_pred --ccccC------------------------ccccchHHHHHHcchHHHHHHHHHHhhhcCCccc-----eeeecccccC
Q 005131 78 --ADLQK------------------------PQIELDGKACAAVGQNSIMALYDTLFSELDLTSA-----QLLVTDNDFR 126 (713)
Q Consensus 78 --~~~~~------------------------~~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~~~~~~~~~ 126 (713)
.++.. .......+.+.+.|+..+..++...|++.|+++. ++++|+.+++
T Consensus 72 ~~~~l~~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~d~i~s~GE~lSa~l~~~~L~~~Gi~a~~l~~~~~i~t~~~~~ 151 (448)
T PRK09084 72 ILDRLGDPNVVREEIERLLENITVLAEAASLATSPALTDELVSHGELMSTLLFVELLRERGVQAEWFDVRKVMRTDDRFG 151 (448)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHhhhhcCChhhhhhhhhHHHHHHHHHHHHHHHhCCCCcEEEchHHeEEecCCCC
Confidence 00000 0011234678899999999999999999999963 5678887776
Q ss_pred chhH-----HHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc--cchhHHHHHHHhhhCCCEEEEeecCCccc
Q 005131 127 DKEF-----RSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF--WDNDSLAALLALELKADLLILLSDVEGLY 199 (713)
Q Consensus 127 ~~~~-----~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~--~~sD~~A~~lA~~l~Ad~li~~TdV~GV~ 199 (713)
+... .....+.+..+++.+ |||++|+-..... + ....+ ++||++|+.+|..|+|+.+++||||||||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-v~Vv~Gf~g~~~~--G---~~ttLgRggSD~~a~~~a~~l~a~~~~i~tdv~Gi~ 225 (448)
T PRK09084 152 RAEPDVAALAELAQEQLLPLLAEG-VVVTQGFIGSDEK--G---RTTTLGRGGSDYSAALLAEALNASRVEIWTDVPGIY 225 (448)
T ss_pred cccccHHHHHHHHHHHHHHhhcCC-cEEecCeeecCCC--C---CEeecCCCchHHHHHHHHHHcCCCEEEEEECCCccc
Confidence 6432 223346677778888 9999983222111 1 11112 78999999999999999999999999999
Q ss_pred cCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEe
Q 005131 200 SGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFH 278 (713)
Q Consensus 200 ~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~ 278 (713)
|+|| .+|+|++|++|+|+|+.++...| ...||| +++.++.++++|++|.|+++|+ ..||+|.
T Consensus 226 t~dP~~~~~a~~i~~is~~ea~ela~~G------a~vlh~--~~~~~~~~~~i~i~i~~~~~~~---------~~GT~I~ 288 (448)
T PRK09084 226 TTDPRIVPAAKRIDEISFEEAAEMATFG------AKVLHP--ATLLPAVRSNIPVFVGSSKDPE---------AGGTWIC 288 (448)
T ss_pred cCCCCCCCCCeEcccCCHHHHHHHHhCC------CcccCH--HHHHHHHHcCCcEEEEeCCCCC---------CCceEEe
Confidence 9999 89999999999999999988765 788999 6999999999999999999883 5699986
Q ss_pred c
Q 005131 279 Q 279 (713)
Q Consensus 279 ~ 279 (713)
.
T Consensus 289 ~ 289 (448)
T PRK09084 289 N 289 (448)
T ss_pred c
Confidence 5
No 198
>PLN02551 aspartokinase
Probab=99.93 E-value=1.4e-25 Score=250.10 Aligned_cols=237 Identities=16% Similarity=0.218 Sum_probs=179.7
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCc----------cccc-
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINS----------SFAD- 79 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~----------~~~~- 79 (713)
.+++|+||||+++.+.+ .++++++.|.... ..++|+|+|+.+.+++.+++....... .+..
T Consensus 51 ~~~~V~KFGGtSv~~~e------~i~~v~~iI~~~~--~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~~~~l~~i 122 (521)
T PLN02551 51 QLTVVMKFGGSSVASAE------RMREVADLILSFP--DERPVVVLSAMGKTTNNLLLAGEKAVSCGVTNVSEIEELSAI 122 (521)
T ss_pred CceEEEEECCCccCCHH------HHHHHHHHHHhcC--CCCEEEEEcCCCCchHHHHHHHHHHhhccccchhhHHHHHHH
Confidence 45679999999999854 7999999998642 346888889999999987664221100 0000
Q ss_pred ----------ccC-----------------------ccccchHHHHHHcchHHHHHHHHHHhhhcCCccc-----ee-ee
Q 005131 80 ----------LQK-----------------------PQIELDGKACAAVGQNSIMALYDTLFSELDLTSA-----QL-LV 120 (713)
Q Consensus 80 ----------~~~-----------------------~~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~-~~ 120 (713)
+.. .......+.+.+.|+..+..++...|++.|+++. ++ ++
T Consensus 123 ~~~h~~~~~~L~~~~~~~~~~~~~l~~ll~~i~~~~~~~~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~lda~~~gi~ 202 (521)
T PLN02551 123 RELHLRTADELGVDESVVEKLLDELEQLLKGIAMMKELTPRTRDYLVSFGERMSTRIFAAYLNKIGVKARQYDAFDIGFI 202 (521)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhHHHHHHHHHHHHHHHHCCCCcEEechHHcceE
Confidence 000 0001223678999999999999999999999885 33 67
Q ss_pred cccccCchhHHHHHHHHHHHHH-----hCCceeEEcCCCceecCCCcccC-CCCcc-----cchhHHHHHHHhhhCCCEE
Q 005131 121 TDNDFRDKEFRSQLSETVKSLL-----SLRVIPVFNENDAVSTRKAPYED-SSGIF-----WDNDSLAALLALELKADLL 189 (713)
Q Consensus 121 ~~~~~~~~~~~~~~~~~i~~~l-----~~g~vpV~~g~d~v~~~~~~~~~-~~g~~-----~~sD~~A~~lA~~l~Ad~l 189 (713)
|++++++........+.+...+ +.+.|||++| +.+.+ ..|.. ++||++|+.||.+|+|+++
T Consensus 203 t~~~~~~a~i~~~~~~~l~~~l~~~~~~~~~v~Vv~G--------Fig~~~~~G~~ttLGRGGSD~sA~~la~~L~A~~v 274 (521)
T PLN02551 203 TTDDFTNADILEATYPAVAKRLHGDWIDDPAVPVVTG--------FLGKGWKTGAITTLGRGGSDLTATTIGKALGLREI 274 (521)
T ss_pred ecCCCCccchhhhhHHHHHHHHHhhhccCCeEEEEcC--------ccccCCCCCcEEecCCChHHHHHHHHHHHcCCCEE
Confidence 8888877655432223333333 4578999998 22222 22332 8899999999999999999
Q ss_pred EEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHh
Q 005131 190 ILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVL 268 (713)
Q Consensus 190 i~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~ 268 (713)
.||||||||||+|| .+|++++|++|||+||.++..+| .++||| +++.++++++||++|.|.++|
T Consensus 275 ~I~tDV~Gi~taDPr~v~~A~~l~~lsy~Ea~elA~~G------akVlhp--~ai~pa~~~~Ipi~vknt~~p------- 339 (521)
T PLN02551 275 QVWKDVDGVLTCDPRIYPNAVPVPYLTFDEAAELAYFG------AQVLHP--QSMRPAREGDIPVRVKNSYNP------- 339 (521)
T ss_pred EEEeCCCceeCCCCCCCCCceEecccCHHHHHHHHhCC------CcccCH--HHHHHHHHCCceEEEEecCCC-------
Confidence 99999999999999 89999999999999999998865 899999 699999999999999999888
Q ss_pred cCCcceeEEecC
Q 005131 269 QGERIGTLFHQD 280 (713)
Q Consensus 269 tge~iGT~i~~~ 280 (713)
+..||+|...
T Consensus 340 --~~~GT~I~~~ 349 (521)
T PLN02551 340 --TAPGTLITKT 349 (521)
T ss_pred --CCCCcEEecc
Confidence 4669999753
No 199
>TIGR02076 pyrH_arch uridylate kinase, putative. This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP.
Probab=99.93 E-value=4.3e-25 Score=223.03 Aligned_cols=218 Identities=25% Similarity=0.307 Sum_probs=158.6
Q ss_pred EEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHHH
Q 005131 14 IVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKACA 93 (713)
Q Consensus 14 iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 93 (713)
+|||||||+|+++. +.+.+++++++|+++++. ++++||||||..+ +.+.+...... .....++ ...
T Consensus 1 iViKlGGs~l~~~~---~~~~i~~i~~~i~~~~~~-~~viiV~ggG~~a-~~~~~~~~~~~-------~~~~~~~--~~g 66 (221)
T TIGR02076 1 IVISLGGSVLSPEI---DAEFIKEFANILRKLSDE-HKVGVVVGGGKTA-RRYIGVARELG-------ASETFLD--EIG 66 (221)
T ss_pred CEEEechhhcCCCC---CHHHHHHHHHHHHHHHhC-CeEEEEECCcHHH-HHHHHHHHHcC-------CCHHHHH--Hhh
Confidence 58999999999763 677899999999999876 8999999887643 44433222111 1100111 111
Q ss_pred HcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcccch
Q 005131 94 AVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIFWDN 173 (713)
Q Consensus 94 ~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~~~s 173 (713)
..++.....++..+|...+++.... + ......+++.|.+||++| +. + ..++
T Consensus 67 ~~~~~ln~~~l~~ll~~~~~~~~~~-----~----------~~~~~~~l~~g~ipv~~G-~~------~-------~~s~ 117 (221)
T TIGR02076 67 IDATRLNAMLLIAALGDDAYPKVPE-----N----------FEEALEAMSLGKIVVMGG-TH------P-------GHTT 117 (221)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCcCC-----C----------HHHHHHHHHcCCEEEEcC-CC------C-------CCCc
Confidence 1122222234555565555543211 0 122456788999999986 11 1 2577
Q ss_pred hHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccC-chHHHHHHHHHHHHcCC
Q 005131 174 DSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRG-GMTAKVKAAVNAAYAGI 251 (713)
Q Consensus 174 D~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g-~m~~Kl~aa~~a~~~gv 251 (713)
|++|+++|.+|+|++|+|+|||||||++|| .+|++++|++|+++|+.++...+ .+++| +|..|+.++..+.+.++
T Consensus 118 D~~A~~lA~~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~---~~~~g~~~~~~~~a~~~~~~~~i 194 (221)
T TIGR02076 118 DAVAALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVEIVGSS---SVKAGSNEVVDPLAAKIIERSKI 194 (221)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHHHhcCC---CccCCCCceeHHHHHHHHHHCCC
Confidence 999999999999999999999999999999 78999999999999988876532 35566 56567788898999999
Q ss_pred cEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 252 PVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 252 ~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
+++|++++.|+++.+++.|+..||.+
T Consensus 195 ~v~I~~g~~~~~l~~~l~g~~~GT~i 220 (221)
T TIGR02076 195 RTIVVNGRDPENLEKVLKGEHVGTII 220 (221)
T ss_pred cEEEECCCCccHHHHHHCCCCCCeEe
Confidence 99999999999999999999999987
No 200
>cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi
Probab=99.93 E-value=3.9e-25 Score=223.12 Aligned_cols=215 Identities=24% Similarity=0.327 Sum_probs=155.0
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHH
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKAC 92 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 92 (713)
++|||||||++++++ +.+.+++++++|+.+.. |++++||||||. +.+.+...+.... .. . ...
T Consensus 1 ~iViKlGGs~l~~~~---~~~~i~~~~~~i~~~~~-~~~iiiV~GgG~-~a~~~~~~~~~~~-----~~--~-----~~~ 63 (221)
T cd04253 1 RIVISLGGSVLAPEK---DADFIKEYANVLRKISD-GHKVAVVVGGGR-LAREYISVARKLG-----AS--E-----AFL 63 (221)
T ss_pred CEEEEeccceeCCCC---ChHHHHHHHHHHHHHhC-CCEEEEEECCCH-HHHHHHHHHHHcC-----CC--H-----HHH
Confidence 589999999997753 56789999999998865 789999999876 5555544332111 00 0 011
Q ss_pred HHcchH--HHH-HHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCc
Q 005131 93 AAVGQN--SIM-ALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGI 169 (713)
Q Consensus 93 ~~~g~~--~~~-~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~ 169 (713)
..+|.. .+. .++..++ ..++++..+ ..+.+..+|+.|.|||++| +. +
T Consensus 64 d~~g~~~~~ln~~~~~~~l-~~~~~~~~~---------------~~~~~~~~l~~g~vpv~~G-~~------~------- 113 (221)
T cd04253 64 DEIGIMATRLNARLLIAAL-GDAYPPVPT---------------SYEEALEAMFTGKIVVMGG-TE------P------- 113 (221)
T ss_pred HHhcCHHHHHHHHHHHHHH-hcCCCcCCC---------------CHHHHHHHHHcCCeEEEEC-CC------C-------
Confidence 111111 222 2233333 355432211 0134678899999999996 21 1
Q ss_pred ccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCc-hHHHHHHHHHHH
Q 005131 170 FWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGG-MTAKVKAAVNAA 247 (713)
Q Consensus 170 ~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~-m~~Kl~aa~~a~ 247 (713)
..++|++|+++|.+|+|++|+|+|||||||++|| .+|++++|++|+++|+.++..... +..|. |..++.++..+.
T Consensus 114 ~~s~D~~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~---~~~g~~~~~d~~a~~~~~ 190 (221)
T cd04253 114 GQSTDAVAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELIDIVGKSS---WKAGSNEPFDPLAAKIIE 190 (221)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHHHccCCC---cCCCCCcchHHHHHHHHH
Confidence 1467999999999999999999999999999999 889999999999999888654321 22232 444557899999
Q ss_pred HcCCcEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 248 YAGIPVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 248 ~~gv~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
++|++++|+++++|+++.++++|+..||.+
T Consensus 191 ~~gi~~~I~~g~~p~~l~~~l~g~~~GT~I 220 (221)
T cd04253 191 RSGIKTIVVDGRDPENLERALKGEFVGTII 220 (221)
T ss_pred HCCCeEEEECCCCccHHHHHHCCCCCCeEe
Confidence 999999999999999999999999999987
No 201
>PRK06291 aspartate kinase; Provisional
Probab=99.93 E-value=3.5e-25 Score=246.87 Aligned_cols=237 Identities=24% Similarity=0.357 Sum_probs=184.0
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCc--c--------------
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINS--S-------------- 76 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~--~-------------- 76 (713)
++|.|||||++.+.+ .++++++.|+...+.+.++|+|+|+.+++|+.++........ .
T Consensus 2 ~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (465)
T PRK06291 2 RLVMKFGGTSVGDGE------RIRHVAKLVKRYRSEGNEVVVVVSAMTGVTDALLEIAEQALDVRDIAKVKDFIADLRER 75 (465)
T ss_pred cEEEEeCcccCCCHH------HHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHHhccchhhHHHHHHHHHHH
Confidence 479999999999854 799999999887677889999999999999998765432110 0
Q ss_pred cc----cccC-c-----------------------------cccchHHHHHHcchHHHHHHHHHHhhhcCCcccee----
Q 005131 77 FA----DLQK-P-----------------------------QIELDGKACAAVGQNSIMALYDTLFSELDLTSAQL---- 118 (713)
Q Consensus 77 ~~----~~~~-~-----------------------------~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~---- 118 (713)
+. ++-. . ...-..+.+.+.|+..+..++...|++.|+++..+
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~~~~L~~~Gi~a~~l~~~~ 155 (465)
T PRK06291 76 HYKAIEEAIKDPDIREEVSKTIDSRIEELEKALVGVSYLGELTPRSRDYILSFGERLSAPILSGALRDLGIKSVALTGGE 155 (465)
T ss_pred HHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHhhhHHHHHHHHHHHHHhCCCCeEEEchHH
Confidence 00 0000 0 00112356889999999999999999999988532
Q ss_pred --eecccccCchhH----HHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCC
Q 005131 119 --LVTDNDFRDKEF----RSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKAD 187 (713)
Q Consensus 119 --~~~~~~~~~~~~----~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad 187 (713)
++++++++..+. ...+.+.++.+++.|.|||++|+-. .+..|.. ++||++|+.+|.+|+|+
T Consensus 156 ~~i~t~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vpVv~Gfig--------~~~~g~~~tlgrggsD~~A~~~A~~l~a~ 227 (465)
T PRK06291 156 AGIITDSNFGNARPLPKTYERVKERLEPLLKEGVIPVVTGFIG--------ETEEGIITTLGRGGSDYSAAIIGAALDAD 227 (465)
T ss_pred CcEEecCCCCceeechhhHHHHHHHHHHHhhcCcEEEEeCcEE--------cCCCCCEEEecCCChHHHHHHHHHhcCCC
Confidence 566666655443 2444567888999999999987211 1122222 69999999999999999
Q ss_pred EEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHH
Q 005131 188 LLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILK 266 (713)
Q Consensus 188 ~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~ 266 (713)
+|++||||||||++|| .+|++++|++|+++|+.+++.+| ...+|| +++.++.++|||++|.|+++|
T Consensus 228 ~~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~l~~~G------~~v~~~--~a~~~~~~~~i~i~i~~~~~~----- 294 (465)
T PRK06291 228 EIWIWTDVDGVMTTDPRIVPEARVIPKISYIEAMELSYFG------AKVLHP--RTIEPAMEKGIPVRVKNTFNP----- 294 (465)
T ss_pred EEEEEECCCCCCCCCCCCCCCCeEccccCHHHHHHHHhCC------CcccCH--HHHHHHHHcCCcEEEecCCCC-----
Confidence 9999999999999999 88999999999999999987654 688999 699999999999999999988
Q ss_pred HhcCCcceeEEecC
Q 005131 267 VLQGERIGTLFHQD 280 (713)
Q Consensus 267 ~~tge~iGT~i~~~ 280 (713)
+..||.|...
T Consensus 295 ----~~~gt~i~~~ 304 (465)
T PRK06291 295 ----EFPGTLITSD 304 (465)
T ss_pred ----CCCceEEEec
Confidence 3569999753
No 202
>cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains. Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size.
Probab=99.93 E-value=2.5e-25 Score=231.70 Aligned_cols=234 Identities=19% Similarity=0.243 Sum_probs=167.5
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChh------hhchHHHhhhhccCc----ccc----
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAV------GLGRQRLRYRRLINS----SFA---- 78 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~------~i~~~~~~~~~~~~~----~~~---- 78 (713)
++|+||||+++.+. ..++++.|..-...+.++++|+|+.+ .+++.+++....... .+.
T Consensus 2 ~~V~KFGGtSv~~~--------~~~v~~~i~~~~~~~~~~vVVvSA~~~~~~~~gvTd~L~~~~~~a~~~~~~~~~~~l~ 73 (306)
T cd04247 2 WVVQKFGGTSVGKF--------PDNIADDIVKAYLKGNKVAVVCSARSTGTKAEGTTNRLLQAADEALDAQEKAFHDIVE 73 (306)
T ss_pred CEEEEeCchhhccH--------HHHHHHHHHhhhccCCceEEEEeccccCCCccChHHHHHHHHHHHHhhccccHHHHHH
Confidence 57999999999873 25677666554456778899999986 889887665322110 000
Q ss_pred -----------cccC-c-----------------------------cccchHHHHHHcchHHHHHHHHHHhhhcCCccce
Q 005131 79 -----------DLQK-P-----------------------------QIELDGKACAAVGQNSIMALYDTLFSELDLTSAQ 117 (713)
Q Consensus 79 -----------~~~~-~-----------------------------~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~ 117 (713)
++-. . ......+.+.+.|+..+..++...|++.|+++..
T Consensus 74 ~i~~~h~~~~~~L~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~l~~~~~~~~d~i~s~GE~lSa~l~a~~L~~~Gi~a~~ 153 (306)
T cd04247 74 DIRSDHLAAARKFIKNPELQAELEEEINKECELLRKYLEAAKILSEISPRTKDLVISTGEKLSCRFMAAVLRDRGVDAEY 153 (306)
T ss_pred HHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEE
Confidence 0000 0 0011225778999999999999999999998853
Q ss_pred -----eeecccc--cCchhHHHHHHHH-HHHHHh-CCceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhh
Q 005131 118 -----LLVTDND--FRDKEFRSQLSET-VKSLLS-LRVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALE 183 (713)
Q Consensus 118 -----~~~~~~~--~~~~~~~~~~~~~-i~~~l~-~g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~ 183 (713)
++.++.+ .........+.+. ...+.+ .+.|||++| +.+.+..|.. ++||++|+.+|..
T Consensus 154 ld~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~G--------Fig~~~~G~~ttLGRgGsD~~A~~la~~ 225 (306)
T cd04247 154 VDLSHIVDLDFSIEALDQTFYDELAQVLGEKITACENRVPVVTG--------FFGNVPGGLLSQIGRGYTDLCAALCAVG 225 (306)
T ss_pred EcHHHheecCCCccccccchhHHHHHHHHHHhhccCCceEEeec--------cEecCCCCCeEEeCCCchHHHHHHHHHH
Confidence 3333322 1111111222222 222322 578999998 2222233332 8899999999999
Q ss_pred hCCCEEEEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCch
Q 005131 184 LKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDE 262 (713)
Q Consensus 184 l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~ 262 (713)
|+|+++++||||||||++|| .+|++++|++|+|+|+.++..+ +.+++|| +++.++++++||++|.|.++|
T Consensus 226 l~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ea~el~~~------GakVlHp--~ti~pa~~~~Ipi~i~nt~~P- 296 (306)
T cd04247 226 LNADELQIWKEVDGIFTADPRKVPTARLLPSITPEEAAELTYY------GSEVIHP--FTMEQVIKARIPIRIKNVENP- 296 (306)
T ss_pred cCCCEEEEeecCCeeECCCCCCCCCCeEecccCHHHHHHHHhC------cCcccCH--HHHHHHHHcCCcEEEecCCCC-
Confidence 99999999999999999999 8999999999999999998775 4899999 699999999999999999998
Q ss_pred hHHHHhcCCcceeEEec
Q 005131 263 NILKVLQGERIGTLFHQ 279 (713)
Q Consensus 263 ~l~~~~tge~iGT~i~~ 279 (713)
+..||+|.+
T Consensus 297 --------~~~GT~I~~ 305 (306)
T cd04247 297 --------RGEGTVIYP 305 (306)
T ss_pred --------CCCCcEEcC
Confidence 356998865
No 203
>TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative. This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between.
Probab=99.93 E-value=2e-25 Score=234.18 Aligned_cols=236 Identities=22% Similarity=0.257 Sum_probs=171.4
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCc------------ccccc
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINS------------SFADL 80 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~------------~~~~~ 80 (713)
++|+|||||++.+ .++++++.|+... .+.++++|+||.+++++.+++....... ....+
T Consensus 1 m~V~KFGGsSv~~--------~~~~v~~ii~~~~-~~~~~vVVVSA~~gvTd~L~~~~~~~~~~~l~~i~~~h~~~~~~L 71 (327)
T TIGR02078 1 MIVVKFGGSSVRY--------AFEEALELVKSLS-EEKRVIVVVSALKGITDCLIRYANTFDKSAALEIEEIYEEFAKEL 71 (327)
T ss_pred CEEEEECCcchHH--------HHHHHHHHHHHHh-cCCCEEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3799999999986 3778888888654 3678999999999999987664321000 00001
Q ss_pred cCc-----------------cccchHHHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHH----HHHHHHHH
Q 005131 81 QKP-----------------QIELDGKACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFR----SQLSETVK 139 (713)
Q Consensus 81 ~~~-----------------~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~----~~~~~~i~ 139 (713)
... ......+.+.++|+..+..++...++...+++.+++.+++++++.... ....+.+.
T Consensus 72 ~~~~~~~~~~l~~~~~~~~l~~~~~~d~I~s~GE~lSa~Lla~gi~a~~vd~~~~i~t~~~~~~a~~~~~~~~~~~~~l~ 151 (327)
T TIGR02078 72 GVDLNILSPYLKELFNPPDLPKEALRDYILSLGERLSAVIFAEGINGKVVDPWDIFFAKGDFGNAFIDIKKSKRNAKILY 151 (327)
T ss_pred ccchhhhHHHHHHHHhhhccCChHHHHHHHHHHHHHHHHHHHccCCcEEEcHHHHhccCCcCCceeechhhhHhhHHHHH
Confidence 000 011224678888888888877777766666666777787776654332 11226677
Q ss_pred HHHhCCceeEEcCCCceecCCCcccCCCCcccchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CCCCCcceeeeeccc
Q 005131 140 SLLSLRVIPVFNENDAVSTRKAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYSGPP-SDPQSKLIDTYVKER 218 (713)
Q Consensus 140 ~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~~~a~~i~~is~~e 218 (713)
.+++.|.|||++|+-. ...+..+.-| .++||++|+.+|.+|+|+.+++||||||||++|| .+|++++|++++++|
T Consensus 152 ~~l~~g~IpVv~Gf~~---~~~G~~ttlG-RGgSD~~Aa~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~lsy~E 227 (327)
T TIGR02078 152 EVLESGKIPVIPGFYG---NLNGYRVTLG-RGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYLSYEE 227 (327)
T ss_pred HHHhCCcEEEEeCCcc---CCCCeEEEcC-CCChHHHHHHHHHhcCCCEEEEEECCCccCCCCCCcCCCceEccccCHHH
Confidence 8899999999997211 1111111100 1689999999999999999999999999999999 899999999999999
Q ss_pred cchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEec
Q 005131 219 HQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQ 279 (713)
Q Consensus 219 ~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~ 279 (713)
+.++..+ +...+|| +++.++.++|||++|.|.++| + .||+|..
T Consensus 228 a~ela~~------Gakvlhp--~a~~~a~~~~Ipi~I~~t~~~---------~-~GT~I~~ 270 (327)
T TIGR02078 228 IKIAAKL------GMKALQW--KAADLAKEYKIPVLFGRTRDW---------R-MGTLISN 270 (327)
T ss_pred HHHHHHC------CchhhHH--HHHHHHHHCCCeEEEEeCCCc---------C-CCcEEec
Confidence 9987664 4667888 699999999999999998877 2 3777754
No 204
>PRK09034 aspartate kinase; Reviewed
Probab=99.93 E-value=3.6e-25 Score=245.59 Aligned_cols=234 Identities=19% Similarity=0.192 Sum_probs=178.9
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhh-------hchHHHhhhhccCcc------ccc
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVG-------LGRQRLRYRRLINSS------FAD 79 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~-------i~~~~~~~~~~~~~~------~~~ 79 (713)
++|.||||+++.+.+ .++++++.|+. .+.++|+|+|+.+. +|+.+++........ +..
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~ii~~---~~~~~vvVVSA~~~~~~~~~~~Td~L~~~~~~~~~~~~~~~~~~~ 71 (454)
T PRK09034 1 MKVVKFGGSSLASAE------QFKKVLNIVKS---DPERKIVVVSAPGKRFKEDTKVTDLLILYAEAVLAGEDYEDIFEA 71 (454)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHhc---cCCCEEEEEcCCcCCCCCccChHHHHHHHHHHHhcCCcHHHHHHH
Confidence 369999999999854 78888888873 46688899999764 888876654322100 000
Q ss_pred cc-------------------------------CccccchHHHHHHcchHHHHHHHHHHhhhcCCccce-----e-eecc
Q 005131 80 LQ-------------------------------KPQIELDGKACAAVGQNSIMALYDTLFSELDLTSAQ-----L-LVTD 122 (713)
Q Consensus 80 ~~-------------------------------~~~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~-----~-~~~~ 122 (713)
++ ........+.+.+.|+..+..++...|++.|+++.. + ++++
T Consensus 72 ~~~~~~~~~~~L~~~~~~~~~~~~~l~~l~~~~~~~~~~~~d~l~s~GE~~S~~l~a~~L~~~g~~a~~~~~~~~~~~t~ 151 (454)
T PRK09034 72 IIARYAEIAKELGLDADILEKIEEILEHLANLASRNPDRLLDAFKARGEDLNAKLIAAYLNYEGIPARYVDPKEAGIIVT 151 (454)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEchHHceEEec
Confidence 00 000111236788999999999999999999998852 3 5677
Q ss_pred cccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEEEEeecCCc
Q 005131 123 NDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLLILLSDVEG 197 (713)
Q Consensus 123 ~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~li~~TdV~G 197 (713)
+++++........+.+..++..+.|||++|+ .+.+..|.. ++||++|+.+|.+|+|+.+.+||||||
T Consensus 152 ~~~~~a~i~~~~~~~~~~~~~~~~v~Vv~GF--------ig~~~~g~~ttlgRggSD~tA~~la~~l~A~~~~i~tdV~G 223 (454)
T PRK09034 152 DEPGNAQVLPESYDNLKKLRDRDEKLVIPGF--------FGVTKDGQIVTFSRGGSDITGAILARGVKADLYENFTDVDG 223 (454)
T ss_pred CCcCceeEcHhhHHHHHHHHhcCCEEEecCc--------cccCCCCCEEecCCCcHHHHHHHHHHHcCCCEEEEEecCCc
Confidence 7777654433334667777778889999982 222223332 889999999999999999999999999
Q ss_pred cccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeE
Q 005131 198 LYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTL 276 (713)
Q Consensus 198 V~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~ 276 (713)
||++|| .+|+|++|++|||+||.++..+ +...||| +++.++++++||++|.|.++| +..||+
T Consensus 224 i~taDPr~v~~A~~l~~lsy~Ea~ela~~------Gakvlhp--~ai~~a~~~~Ipi~v~~~~~p---------~~~GT~ 286 (454)
T PRK09034 224 IYAANPRIVKNPKSIKEITYREMRELSYA------GFSVFHD--EALIPAYRGGIPINIKNTNNP---------EDPGTL 286 (454)
T ss_pred cCcCCCCCCCCCeECCccCHHHHHHHHhC------CcccCCH--HHHHHHHHcCCCEEEEcCCCC---------CCCccE
Confidence 999999 8999999999999999998775 4899999 699999999999999999888 355999
Q ss_pred EecC
Q 005131 277 FHQD 280 (713)
Q Consensus 277 i~~~ 280 (713)
|...
T Consensus 287 I~~~ 290 (454)
T PRK09034 287 IVPD 290 (454)
T ss_pred EEec
Confidence 9753
No 205
>PRK09411 carbamate kinase; Reviewed
Probab=99.92 E-value=2.9e-24 Score=219.00 Aligned_cols=243 Identities=22% Similarity=0.274 Sum_probs=174.8
Q ss_pred cceEEEEeCccceecCCC--c--ccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCcccc
Q 005131 11 VKRIVVKVGTAVVTRSDG--R--LALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIE 86 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~--~--~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~ 86 (713)
|+++||.|||++|..+.+ + .+.+.++..++.|+.+.+. +++||+||.|||+|..+++...... . ..+.
T Consensus 1 ~~~iVvAlGGNAl~~~g~~~~~~~q~~~v~~~a~~ia~l~~~-~~~vitHGNGPQVG~l~~~~~~~~~-----~--~~~p 72 (297)
T PRK09411 1 MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARS-YRLAIVHGNGPQVGLLALQNLAWKE-----V--EPYP 72 (297)
T ss_pred CCeEEEEcCchhhcCCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCEEEEeCCccHHHHHHHHHHhhcC-----C--CCCC
Confidence 468999999999987553 3 3335889999999999988 9999999999999998766433322 1 3344
Q ss_pred chHHHHHHcchHHHHHHHHHHhhhcCCcc------ceeeecccccC-------------------------------chh
Q 005131 87 LDGKACAAVGQNSIMALYDTLFSELDLTS------AQLLVTDNDFR-------------------------------DKE 129 (713)
Q Consensus 87 l~~~~~~~~g~~~~~~l~~~~l~~~gi~~------~~~~~~~~~~~-------------------------------~~~ 129 (713)
|+.-.+.+-|.++.+ +.+.|+..++.- .+..+..+|.. ..+
T Consensus 73 ld~~~a~sqG~iGy~--l~q~l~~~~~~~~v~t~~Tq~~Vd~~DpaF~~PtKpiG~~y~~e~a~~l~~e~g~~~~~dg~g 150 (297)
T PRK09411 73 LDVLVAESQGMIGYM--LAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKY 150 (297)
T ss_pred chhhhhhcccHHHHH--HHHHHHHcCCCCCeEEEEEEEEECCCCccccCCCCccCCccCHHHHHHHHHhcCCEEEecCCc
Confidence 444455556666655 556666655432 12222222111 011
Q ss_pred HHH---------HH-HHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCcc
Q 005131 130 FRS---------QL-SETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGL 198 (713)
Q Consensus 130 ~~~---------~~-~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV 198 (713)
+++ .+ .+.|+.+|+.|+|||.+||..+... ....+... +|+|.+|+.||.+|+||+|+|+||||||
T Consensus 151 ~rrVVpSP~P~~iVe~~~I~~Ll~~G~IVI~~gGGGIPV~---~~~~G~e~vIDkD~~Aa~LA~~L~Ad~LIiLTDVdGV 227 (297)
T PRK09411 151 LRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVT---EDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAV 227 (297)
T ss_pred eEEEccCCCCcceECHHHHHHHHHCCCEEEecCCCCCCeE---EcCCCeEEecCHHHHHHHHHHHhCCCEEEEEeCchhh
Confidence 111 11 4999999999999999874332221 11122222 9999999999999999999999999999
Q ss_pred ccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHc-CCcEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 199 YSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYA-GIPVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 199 ~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~-gv~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
|+++ .+|++++|++++.+|++.++. .+|+|.||++++..+++. |.+++|++ ++.+.+++.|+ .||.|
T Consensus 228 ~~n~-~~p~~~~I~~it~~e~~~~~~-------~~GgM~pKVeAA~~~v~~~g~~a~I~~---l~~~~~~l~G~-~GT~I 295 (297)
T PRK09411 228 YENW-GTPQQRAIRHATPDELAPFAK-------ADGAMGPKVTAVSGYVRSRGKPAWIGA---LSRIEETLAGE-AGTCI 295 (297)
T ss_pred ccCC-CCCCCcCCCCcCHHHHHHhcc-------CCCCcHHHHHHHHHHHHhCCCeEEECC---hhHHHHHHCCC-CCeEE
Confidence 9874 577899999999999877653 489999999999888885 55698876 88888999988 59987
Q ss_pred e
Q 005131 278 H 278 (713)
Q Consensus 278 ~ 278 (713)
.
T Consensus 296 ~ 296 (297)
T PRK09411 296 S 296 (297)
T ss_pred e
Confidence 4
No 206
>PRK05925 aspartate kinase; Provisional
Probab=99.92 E-value=5.6e-25 Score=241.12 Aligned_cols=235 Identities=21% Similarity=0.239 Sum_probs=176.8
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcc----cc--------
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSS----FA-------- 78 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~----~~-------- 78 (713)
|.++|.||||+++.+.+ .++++++.|.. ..++++|+|+.+.+++.+.......... +.
T Consensus 1 ~~~~V~KFGGtSv~~~e------~i~~v~~ii~~----~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~i~~~~~~ 70 (440)
T PRK05925 1 MAPLVYKFGGTSLGTAE------SIRRVCDIICK----EKPSFVVVSAVAGVTDLLEEFCRLSKGKREALTEKIREKHEE 70 (440)
T ss_pred CCcEEEEECccccCCHH------HHHHHHHHHhc----CCCEEEEECCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 56789999999999854 78888888864 2568888899999999976543210000 00
Q ss_pred ---cc----c--------------CccccchHHHHHHcchHHHHHHHHHHhhhcCCccc-----eeeecccccCchhHH-
Q 005131 79 ---DL----Q--------------KPQIELDGKACAAVGQNSIMALYDTLFSELDLTSA-----QLLVTDNDFRDKEFR- 131 (713)
Q Consensus 79 ---~~----~--------------~~~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~~~~~~~~~~~~~~- 131 (713)
.+ . ........+...+.|+..+..++...|++.|+++. +++++++++.+....
T Consensus 71 ~~~~l~~~~~~~~~~~~L~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~a~~L~~~Gi~a~~ld~~~~i~t~~~~~~a~~~~ 150 (440)
T PRK05925 71 IAKELGIEFSLSPWWERLEHFEDVEEISSEDQARILAIGEDISASLICAYCCTYVLPLEFLEARQVILTDDQYLRAVPDL 150 (440)
T ss_pred HHHHhhcchhhhHHHHHHHHHHHhCcCCchhhhhheehhHHHHHHHHHHHHHhCCCCeEEEcHHHhEeecCCccccccCH
Confidence 00 0 00011233677899999999999999999999663 567788777654441
Q ss_pred HHHH-HHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEEEEeecCCccccCCC-C
Q 005131 132 SQLS-ETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLLILLSDVEGLYSGPP-S 204 (713)
Q Consensus 132 ~~~~-~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~ 204 (713)
.... ......++++.|||++| +.+.+..|.. ++||++|+++|..|+||.+++|||||||||+|| .
T Consensus 151 ~~~~~~~~~~~~~~~~v~Vv~G--------F~g~~~~G~~ttLgrGgsD~~AallA~~l~Ad~~~i~TdVdGvytaDP~~ 222 (440)
T PRK05925 151 ALMQTAWHELALQEDAIYIMQG--------FIGANSSGKTTVLGRGGSDFSASLIAELCKAREVRIYTDVNGIYTMDPKI 222 (440)
T ss_pred HHHHHHHHHhhccCCcEEEecC--------cceeCCCCCEEEeccCcHHHHHHHHHHHcCCCEEEEEEcCCccCCCCcCC
Confidence 2222 33333456788999988 2222233333 999999999999999999999999999999999 8
Q ss_pred CCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEecC
Q 005131 205 DPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQD 280 (713)
Q Consensus 205 ~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~ 280 (713)
+|+|++|++|+++|+.++... ++..++| +++.++.++|||++|.|+++|+ ..||+|.+.
T Consensus 223 ~~~A~~i~~is~~ea~ela~~------Ga~vl~~--~~~~~a~~~~Ipi~I~~~~~p~---------~~GT~i~~~ 281 (440)
T PRK05925 223 IKDAQLIPELSFEEMQNLASF------GAKVLHP--PMLKPCVRAGIPIFVTSTFDVT---------KGGTWIYAS 281 (440)
T ss_pred CCCCeEeeEECHHHHHHHHhC------CCCcCCH--HHHHHHHHCCCcEEEecCCCCC---------CCccEEecC
Confidence 999999999999999998764 5889999 5789999999999999999995 469999763
No 207
>PLN02825 amino-acid N-acetyltransferase
Probab=99.92 E-value=2.4e-24 Score=238.08 Aligned_cols=249 Identities=18% Similarity=0.211 Sum_probs=190.5
Q ss_pred ccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchH
Q 005131 10 DVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDG 89 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 89 (713)
+-+++|||+||+++.++. +..++.+|+.++..|.++||||||+++|+..+ +..+.......++|+++.+.-.
T Consensus 16 rgktfVIk~gG~~l~~~~-------~~~l~~DialL~~lGi~~VlVHGggpqI~~~l-~~~gi~~~f~~G~RVTd~~~L~ 87 (515)
T PLN02825 16 RGSTFVVVISGEVVAGPH-------LDNILQDISLLHGLGIKFVLVPGTHVQIDKLL-AERGREPKYVGAYRITDSAALQ 87 (515)
T ss_pred CCCEEEEEECchhhcCch-------HHHHHHHHHHHHHCCCCEEEEcCCCHHHHHHH-HHcCCCceeeCCcccCCHHHHH
Confidence 357899999999998754 78999999999999999999999999999984 4455555455678888754333
Q ss_pred HHHHHcchHHHHH--HH-----HHHhhhcCCcc----ce-------eee-------cccccCchhHHHHHH-HHHHHHHh
Q 005131 90 KACAAVGQNSIMA--LY-----DTLFSELDLTS----AQ-------LLV-------TDNDFRDKEFRSQLS-ETVKSLLS 143 (713)
Q Consensus 90 ~~~~~~g~~~~~~--l~-----~~~l~~~gi~~----~~-------~~~-------~~~~~~~~~~~~~~~-~~i~~~l~ 143 (713)
......|+....- .+ ...|++.|.++ .. ++. ...|++++|.++.++ +.|+.+|+
T Consensus 88 ~~~~~~G~v~~~i~a~Ls~~~~v~~l~~~G~~a~~~~~gl~~~~Gn~v~a~~~gv~dgvD~g~vG~V~~Vd~~~i~~~L~ 167 (515)
T PLN02825 88 ASMEAAGKIRVMIEAKLSPGPSIPNLRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVSRIKERLD 167 (515)
T ss_pred HHHHHHHHHHHHHHHhhccccchhHHHhcCCCCccccCceEeccCcEEEEEECCCCcCccccceeeEEEEcHHHHHHHHh
Confidence 3445566655441 11 12346666654 11 111 123788899988887 99999999
Q ss_pred CCceeEEcCCCceecCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchh
Q 005131 144 LRVIPVFNENDAVSTRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGE 222 (713)
Q Consensus 144 ~g~vpV~~g~d~v~~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~ 222 (713)
.|.|||++| .+++.++..| +|+|.+|+.+|.+|+|++|+|+|||+ +++. ++++|++|+.+|++++
T Consensus 168 ~g~Ipvisp--------lg~s~~Ge~~NinaD~vA~avA~aL~A~KLI~ltd~~-~~~~-----~g~li~~l~~~e~~~l 233 (515)
T PLN02825 168 SNCIVLLSN--------LGYSSSGEVLNCNTYEVATACALAIGADKLICIVDGP-ILDE-----NGRLIRFMTLEEADML 233 (515)
T ss_pred CCCeEEECC--------ceECCCCCEEeeCHHHHHHHHHHHcCCCeEEEEeCcc-eecC-----CCCCcCcCCHHHHHHH
Confidence 999999998 4455566666 99999999999999999999999977 5544 4889999999999998
Q ss_pred hhcCC-------C---------------Cc-------------------------------c------------------
Q 005131 223 ITFGD-------K---------------SR-------------------------------V------------------ 231 (713)
Q Consensus 223 ~~~~~-------~---------------~~-------------------------------~------------------ 231 (713)
++.+. . .. .
T Consensus 234 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (515)
T PLN02825 234 IRKRAKQSEIAANYVKAVGGEDYSYSLGLDSVNTTPFNNNGRGFWGSGSATDSFQNGVGFDNGNGLSGEQGFAIGGEERL 313 (515)
T ss_pred HHhhhhcchhhhhhhhhccccccccccccccccccccccccccccccccccccccccccccCcccccccccccccchhhc
Confidence 86420 0 00 0
Q ss_pred -ccCchHHHHHHHHHHHHcCCc-EEEEeCCCchhHH-HHhcCCcceeEEecC
Q 005131 232 -GRGGMTAKVKAAVNAAYAGIP-VVITSGYSDENIL-KVLQGERIGTLFHQD 280 (713)
Q Consensus 232 -~~g~m~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~-~~~tge~iGT~i~~~ 280 (713)
.+.....||++|..|++.||+ +|++++..++.+. ++||.+.+||++..+
T Consensus 314 ~~~~~~~~~l~~a~~a~~~gv~r~hl~~~~~~gall~elft~dg~gt~i~~~ 365 (515)
T PLN02825 314 SRLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMGTMIASD 365 (515)
T ss_pred hhhhhHHHHHHHHHHHHHcCCCeEEeccCCCCchHHHHhhccCCceeEeccC
Confidence 112234469999999999999 9999999999985 999999999999875
No 208
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism]
Probab=99.92 E-value=4e-24 Score=211.07 Aligned_cols=250 Identities=27% Similarity=0.368 Sum_probs=189.2
Q ss_pred ceEEEEeCccceecCCC----cccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccc
Q 005131 12 KRIVVKVGTAVVTRSDG----RLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIEL 87 (713)
Q Consensus 12 ~~iViKlGGs~l~~~~~----~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 87 (713)
+++||.+||++|.++.. ..+.+.++..+++|+.+.+.|+++||.||.|+|+|..+++.....+ .. ....+.|
T Consensus 1 ~~iVvALGGNAll~~g~~~tae~Q~~~v~~ta~~i~~l~~~g~e~VitHGNGPQVG~l~lq~~aa~~--~~--~~p~~PL 76 (312)
T COG0549 1 KRIVVALGGNALLQRGEPLTAEAQYEAVKITAEQIADLIASGYEVVITHGNGPQVGLLLLQNEAADS--EK--GVPAYPL 76 (312)
T ss_pred CeEEEEecchhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHhhhhcc--cc--CCCCccH
Confidence 57999999999998754 3556889999999999999999999999999999998766533211 11 2233445
Q ss_pred hHHHHHHcchHHHH--HHHHHHhhhcCCc--c----ceeeecccc--------------------------------cCc
Q 005131 88 DGKACAAVGQNSIM--ALYDTLFSELDLT--S----AQLLVTDND--------------------------------FRD 127 (713)
Q Consensus 88 ~~~~~~~~g~~~~~--~l~~~~l~~~gi~--~----~~~~~~~~~--------------------------------~~~ 127 (713)
+...+.+-|+++.+ ..+.+.|...+++ . .+..+..+| ...
T Consensus 77 d~~~AmsQG~IGy~l~qal~n~l~~~~~~~~v~tvvTqv~VD~nDPAF~nPtKpIGpfY~~eea~~l~~~~gw~~keD~~ 156 (312)
T COG0549 77 DVLVAMSQGMIGYMLQQALRNELPRRGLEKPVVTVVTQVEVDANDPAFLNPTKPIGPFYSEEEAEELAKEYGWVFKEDAG 156 (312)
T ss_pred HHHhHhhhhHHHHHHHHHHHHHHhhcCCCCceeEEEEEEEEcCCCccccCCCCCCCCCcCHHHHHHHHhhcCcEEEecCC
Confidence 55555666666654 2355667777753 1 122222221 111
Q ss_pred hhHHH--------HH--HHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc------cchhHHHHHHHhhhCCCEEEE
Q 005131 128 KEFRS--------QL--SETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF------WDNDSLAALLALELKADLLIL 191 (713)
Q Consensus 128 ~~~~~--------~~--~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~------~~sD~~A~~lA~~l~Ad~li~ 191 (713)
.|+++ ++ .+.|+.|+++|.++|.+||. |.|.....+.+ +|.|.+++.||.+++||.|+|
T Consensus 157 rG~RRVVpSP~P~~IvE~~~Ik~L~~~g~vVI~~GGG-----GIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liI 231 (312)
T COG0549 157 RGYRRVVPSPKPVRIVEAEAIKALLESGHVVIAAGGG-----GIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLII 231 (312)
T ss_pred CCeeEecCCCCCccchhHHHHHHHHhCCCEEEEeCCC-----CcceEecCCCcceeeEEEccHHHHHHHHHHhcCCEEEE
Confidence 22222 12 39999999999999999844 44444333324 999999999999999999999
Q ss_pred eecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHc-CCcEEEEeCCCchhHHHHhcC
Q 005131 192 LSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYA-GIPVVITSGYSDENILKVLQG 270 (713)
Q Consensus 192 ~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~-gv~v~I~~g~~~~~l~~~~tg 270 (713)
+||||+||.++ ..|+.+.|++++.+|++.+++.++ |..|+|.||+++|...+++ |.++.|.+ .+.+.+++.|
T Consensus 232 LTdVd~Vy~n~-gkp~q~~L~~v~~~e~~~yl~eg~---Fa~GSM~PKVeAai~Fv~~~gk~A~Its---Le~~~~~l~g 304 (312)
T COG0549 232 LTDVDAVYVNF-GKPNQQALDRVTVDEMEKYLAEGQ---FAAGSMGPKVEAAISFVENTGKPAIITS---LENAEAALEG 304 (312)
T ss_pred EeccchheecC-CCccchhhcccCHHHHHHHHhcCC---CCCCCccHHHHHHHHHHHcCCCceEECc---HHHHHHHhcc
Confidence 99999999987 678999999999999999998874 9999999999999998885 55599998 8999999998
Q ss_pred CcceeEEe
Q 005131 271 ERIGTLFH 278 (713)
Q Consensus 271 e~iGT~i~ 278 (713)
+. ||.|.
T Consensus 305 ~~-GT~I~ 311 (312)
T COG0549 305 KA-GTVIV 311 (312)
T ss_pred CC-CcEec
Confidence 76 88875
No 209
>PRK04531 acetylglutamate kinase; Provisional
Probab=99.92 E-value=7.2e-24 Score=228.87 Aligned_cols=212 Identities=22% Similarity=0.213 Sum_probs=160.6
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHH
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGK 90 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (713)
++++|||+||+++.+ . +..++++|+.+++.|.++|||||||++++..+ ...+.......++|++..+.-..
T Consensus 36 ~~~~VIKiGG~~l~~-~-------~~~l~~dla~L~~~G~~~VlVHGggpqI~~~l-~~~gie~~~v~G~RVTd~~tl~v 106 (398)
T PRK04531 36 ERFAVIKVGGAVLRD-D-------LEALASSLSFLQEVGLTPIVVHGAGPQLDAEL-DAAGIEKETVNGLRVTSPEALAI 106 (398)
T ss_pred CcEEEEEEChHHhhc-C-------HHHHHHHHHHHHHCCCcEEEEECCCHHHHHHH-HHcCCCcEEECCEecCCHHHHHH
Confidence 478999999999974 2 57899999999999999999999999999875 44444443455667765322111
Q ss_pred HHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc
Q 005131 91 ACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF 170 (713)
Q Consensus 91 ~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~ 170 (713)
+..++++... .+.+.|+.+|+.|.|||++| + +....+..+
T Consensus 107 v~~~l~~vn~--------------------------------~lv~~I~~~L~~g~IPVlsp---l-----g~~~~G~~~ 146 (398)
T PRK04531 107 VRKVFQRSNL--------------------------------DLVEAVESSLRAGSIPVIAS---L-----GETPSGQIL 146 (398)
T ss_pred HHHHHHHHHH--------------------------------HHHHHHHHHHHCCCEEEEeC---c-----EECCCCcEE
Confidence 1111111110 11122888999999999987 1 122233334
Q ss_pred -cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeec-cccchhhhcCCCCccccCchHHHHHHHHHHHH
Q 005131 171 -WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVK-ERHQGEITFGDKSRVGRGGMTAKVKAAVNAAY 248 (713)
Q Consensus 171 -~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~-~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~ 248 (713)
+|+|.+|+.||.+|+|++|+|+|||+|||+. ++++|++|+. ++...++..+ ++++||++||+++..+++
T Consensus 147 NvnaD~vA~~LA~aL~a~KLIfltdv~GV~d~-----~g~~i~~i~~~~e~~~l~~~~----~vtgGM~~KL~~a~~al~ 217 (398)
T PRK04531 147 NINADVAANELVSALQPYKIIFLTGTGGLLDA-----DGKLISSINLSTEYDHLMQQP----WINGGMKLKLEQIKELLD 217 (398)
T ss_pred EECHHHHHHHHHHHcCCCEEEEEECCCCccCC-----CCCCcccCCHHHHHHHHHhcC----CCCccHHHHHHHHHHHHh
Confidence 8999999999999999999999999999975 4899999996 5777776544 689999999999999997
Q ss_pred cCCcEEEEeCCCchhHH-HHhcCCcceeEEecC
Q 005131 249 AGIPVVITSGYSDENIL-KVLQGERIGTLFHQD 280 (713)
Q Consensus 249 ~gv~v~I~~g~~~~~l~-~~~tge~iGT~i~~~ 280 (713)
+...++++++..|+++. ++++.+..||++...
T Consensus 218 ~~~~~~~V~i~~~~~Ll~eLft~~G~GT~I~~g 250 (398)
T PRK04531 218 RLPLESSVSITSPSDLAKELFTHKGSGTLVRRG 250 (398)
T ss_pred CCCcEEEEEecCCCHHHHHHccCCCCCeEEecC
Confidence 53348888888899985 788888899999875
No 210
>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional
Probab=99.92 E-value=2.3e-24 Score=251.81 Aligned_cols=236 Identities=15% Similarity=0.152 Sum_probs=177.5
Q ss_pred ccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccc-----------
Q 005131 10 DVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFA----------- 78 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~----------- 78 (713)
.|+++|+|||||++.+.+ .++++++.|....+. ++++|+|+.+.+++.++...........
T Consensus 9 ~M~~~V~KFGGtSv~~~e------~i~~v~~iI~~~~~~--~~vVVVSA~~~~Td~L~~~~~~~~~~~~~~~~~l~~i~~ 80 (810)
T PRK09466 9 AMGRQLHKFGGSSLADAK------CYRRVAGILAEYSQP--DDLVVVSAAGKTTNQLISWLKLSQTDRLSAHQVQQTLRR 80 (810)
T ss_pred cceeEEEEECccccCCHH------HHHHHHHHHhhhccC--CEEEEEcCCCCCHHHHHHHHHHhhcCchhHHHHHHHHHH
Confidence 467899999999999855 799999999865443 3788889999999998766443210000
Q ss_pred -------cccC------------------------ccccchHHHHHHcchHHHHHHHHHHhhhcCCccc-----eeeecc
Q 005131 79 -------DLQK------------------------PQIELDGKACAAVGQNSIMALYDTLFSELDLTSA-----QLLVTD 122 (713)
Q Consensus 79 -------~~~~------------------------~~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~~~~~ 122 (713)
++.. .......+.+.+.|+..+..++...|++.|+++. +++.++
T Consensus 81 ~h~~~~~~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~d~ils~GE~~Sa~lla~~L~~~G~~a~~ld~~~~i~~~ 160 (810)
T PRK09466 81 YQQDLIEGLLPAEQARSLLSRLISDLERLAALLDGGINDAQYAEVVGHGEVWSARLMAALLNQQGLPAAWLDARSFLRAE 160 (810)
T ss_pred HHHHHHHHhhcchhhhHHHHHHHHHHHHHHHHhhccCCchhhhheecHHHHHHHHHHHHHHHhCCCCcEEEcHHHheecC
Confidence 0000 0011123577889999999999999999999885 333443
Q ss_pred cccCchhH-HHHHHHHHHHHHhCC--ceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEEEEeec
Q 005131 123 NDFRDKEF-RSQLSETVKSLLSLR--VIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLLILLSD 194 (713)
Q Consensus 123 ~~~~~~~~-~~~~~~~i~~~l~~g--~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~li~~Td 194 (713)
... .... .....+.+..++..+ .+||++|+-. .+..|.. ++||++|+.+|.+|+|+++.||||
T Consensus 161 ~~~-~~~i~~~~~~~~l~~~~~~~~~~v~Vv~GF~g--------~~~~G~~ttLGRGGSD~tA~~la~~l~A~~v~i~tD 231 (810)
T PRK09466 161 RAA-QPQVDEGLSYPLLQQLLAQHPGKRLVVTGFIS--------RNEAGETVLLGRNGSDYSATLIGALAGVERVTIWSD 231 (810)
T ss_pred CCC-CcccchhhhHHHHHHHHhccCCeEEEeeCccc--------cCCCCCEEEcCCChHHHHHHHHHHHcCCCEEEEEeC
Confidence 332 2222 112236677777654 8999997222 2223332 889999999999999999999999
Q ss_pred CCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcc
Q 005131 195 VEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERI 273 (713)
Q Consensus 195 V~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~i 273 (713)
||||||+|| .+|++++|++|||+|+.|+..+| +++||| +++.++++++||++|.|.++| +..
T Consensus 232 V~Gi~taDPr~v~~A~~i~~isy~Ea~ela~~G------akVlHp--~ti~pa~~~~Ipi~V~ntf~p---------~~~ 294 (810)
T PRK09466 232 VAGVYSADPRKVKDACLLPLLRLDEASELARLA------APVLHA--RTLQPVSGSDIDLQLRCSYQP---------EQG 294 (810)
T ss_pred CCccccCCcccCCCceEcccCCHHHHHHHHHcC------ccccCH--HHHHHHHHcCCeEEEecCCCC---------CCC
Confidence 999999999 89999999999999999998865 899999 699999999999999999988 456
Q ss_pred eeEEec
Q 005131 274 GTLFHQ 279 (713)
Q Consensus 274 GT~i~~ 279 (713)
||+|..
T Consensus 295 GT~I~~ 300 (810)
T PRK09466 295 STRIER 300 (810)
T ss_pred ceEEec
Confidence 899865
No 211
>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional
Probab=99.89 E-value=1.6e-22 Score=238.49 Aligned_cols=235 Identities=18% Similarity=0.253 Sum_probs=177.9
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcc---cc-----------
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSS---FA----------- 78 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~---~~----------- 78 (713)
+.|.||||+++.+.+ .++++++.|+...+. .++|+|+|+.+.+|+.+++........ ..
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~iI~~~~~~-~~~vVVVSA~~~vTd~L~~~~~~~~~~~~~~~~~~~~~~~~h~ 73 (819)
T PRK09436 1 MRVLKFGGTSVANAE------RFLRVADIIESNARQ-EQVAVVLSAPAKVTNHLVAMIEKAAKGDDAYPEILDAERIFHE 73 (819)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHHhhccc-CCEEEEEcCCcCcHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 369999999999854 899999999876444 688899999999999987654321100 00
Q ss_pred ---cc----cC---c-------------------------cccchHHHHHHcchHHHHHHHHHHhhhcCCccc-----ee
Q 005131 79 ---DL----QK---P-------------------------QIELDGKACAAVGQNSIMALYDTLFSELDLTSA-----QL 118 (713)
Q Consensus 79 ---~~----~~---~-------------------------~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~ 118 (713)
++ .. . ...-.++.+.+.|+..+..++...|++.|+++. ++
T Consensus 74 ~~~~l~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~ 153 (819)
T PRK09436 74 LLDGLAAALPGFDLAQLKAKVDQEFAQLKDILHGISLLGECPDSVNAAIISRGERLSIAIMAAVLEARGHDVTVIDPREL 153 (819)
T ss_pred HHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhheeeHHHHHHHHHHHHHHHhCCCCeEEECHHHe
Confidence 00 00 0 001123567788999999999999999999885 34
Q ss_pred eecccccCchhHH-HHHHHHHHHHH-hCCceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEEEE
Q 005131 119 LVTDNDFRDKEFR-SQLSETVKSLL-SLRVIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLLIL 191 (713)
Q Consensus 119 ~~~~~~~~~~~~~-~~~~~~i~~~l-~~g~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~li~ 191 (713)
++++.++.+.... ....+.++.++ +.+.|||++|+ .+.+..|.. ++||++|+.+|..|+||.|++
T Consensus 154 i~t~~~~~~~~~~~~~~~~~i~~~~~~~~~v~Vv~Gf--------ig~~~~G~~ttlGRgGSD~~A~~~A~~l~A~~~~i 225 (819)
T PRK09436 154 LLADGHYLESTVDIAESTRRIAASFIPADHVILMPGF--------TAGNEKGELVTLGRNGSDYSAAILAACLDADCCEI 225 (819)
T ss_pred EEecCCCCCceechHhhHHHHHHHHhcCCcEEEecCc--------ccCCCCCCEEEeCCCCchHHHHHHHHHcCCCEEEE
Confidence 5677666654442 22335566654 46899999972 122222222 789999999999999999999
Q ss_pred eecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcC
Q 005131 192 LSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQG 270 (713)
Q Consensus 192 ~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg 270 (713)
|||||||||+|| .+|++++|++|+|+|+.++..+ ++..||| +++.+++++|||++|.|+++|+
T Consensus 226 ~tdVdGvyt~DP~~~~~A~~i~~isy~ea~el~~~------G~kvlhp--~a~~~a~~~~Ipi~i~n~~~p~-------- 289 (819)
T PRK09436 226 WTDVDGVYTADPRVVPDARLLKSLSYQEAMELSYF------GAKVLHP--RTIAPIAQFQIPCLIKNTFNPQ-------- 289 (819)
T ss_pred EECCCceECCCCCCCCCCeEeeEecHHHHHHHHhc------CCccchH--HHHHHHHHCCceEEEccCCCCC--------
Confidence 999999999999 8999999999999999998765 4789999 6999999999999999999883
Q ss_pred CcceeEEec
Q 005131 271 ERIGTLFHQ 279 (713)
Q Consensus 271 e~iGT~i~~ 279 (713)
..||+|..
T Consensus 290 -~~GT~I~~ 297 (819)
T PRK09436 290 -APGTLIGA 297 (819)
T ss_pred -CCceEEEe
Confidence 56899865
No 212
>PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional
Probab=99.88 E-value=2.2e-22 Score=239.90 Aligned_cols=231 Identities=18% Similarity=0.175 Sum_probs=170.2
Q ss_pred ccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCc-c-----------c
Q 005131 10 DVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINS-S-----------F 77 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~-~-----------~ 77 (713)
+|+++|+|||||++.+.+ .++++++.|+...+.+.++++|+|+.+++|+.++........ . +
T Consensus 6 ~~~~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~ 79 (861)
T PRK08961 6 TDRWVVLKFGGTSVSRRH------RWDTIAKIVRKRLAEGGRVLVVVSALSGVSNELEAIIAAAGAGDSASRVAAIRQRH 79 (861)
T ss_pred CCCcEEEEECccccCCHH------HHHHHHHHHHhhcccCCCEEEEEeCCCCchHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 367899999999999854 799999999876677889999999999999987665321000 0 0
Q ss_pred ----ccccCcc------------------------ccchHHHHHHcchHHHHHHHHHHhhhcCCccc-----eeeecccc
Q 005131 78 ----ADLQKPQ------------------------IELDGKACAAVGQNSIMALYDTLFSELDLTSA-----QLLVTDND 124 (713)
Q Consensus 78 ----~~~~~~~------------------------~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~-----~~~~~~~~ 124 (713)
..+.... ..-....+.+.|+..+..++...|++.|+++. +++.++++
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~~~~~~~ 159 (861)
T PRK08961 80 RELLAELGVDAEAVLAERLAALQRLLDGIRALTRASLRWQAEVLGQGELLSTTLGAAYLEASGLDMGWLDAREWLTALPQ 159 (861)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccCChhhhheEEEehHHHHHHHHHHHHHhCCCCcEEEcHHHhEeecCc
Confidence 0000000 00112345588999999999999999999984 34444442
Q ss_pred c--------CchhHHHHH-HHHHHHHHhCC-ceeEEcCCCceecCCCcccCCCCcc-----cchhHHHHHHHhhhCCCEE
Q 005131 125 F--------RDKEFRSQL-SETVKSLLSLR-VIPVFNENDAVSTRKAPYEDSSGIF-----WDNDSLAALLALELKADLL 189 (713)
Q Consensus 125 ~--------~~~~~~~~~-~~~i~~~l~~g-~vpV~~g~d~v~~~~~~~~~~~g~~-----~~sD~~A~~lA~~l~Ad~l 189 (713)
. ......... ...++.+++.+ .|||++|+-.+ +..|.. ++||++|+.+|.+|+|++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~--------~~~g~~ttLgrggsD~~A~~iA~~l~a~~~ 231 (861)
T PRK08961 160 PNQSEWSQYLSVSCQWQSDPALRERFAAQPAQVLITQGFIAR--------NADGGTALLGRGGSDTSAAYFAAKLGASRV 231 (861)
T ss_pred cccccccccccceecHhhHHHHHHHHhccCCeEEEeCCccee--------CCCCCEEEEeCCchHHHHHHHHHHcCCCEE
Confidence 1 111110111 24566666665 59999983222 222222 8999999999999999999
Q ss_pred EEeecCCccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCch
Q 005131 190 ILLSDVEGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDE 262 (713)
Q Consensus 190 i~~TdV~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~ 262 (713)
+++||||||||+|| .+|++++|++||++|+.+++..| ...||| +++.+++++|||++|.|+++|+
T Consensus 232 ~i~tdv~Gv~t~dP~~~~~a~~i~~ls~~e~~el~~~g------~~v~~~--~a~~~a~~~~i~i~v~~~~~~~ 297 (861)
T PRK08961 232 EIWTDVPGMFSANPKEVPDARLLTRLDYDEAQEIATTG------AKVLHP--RSIKPCRDAGIPMAILDTERPD 297 (861)
T ss_pred EEEeCCCccccCCCCCCCCceEecccCHHHHHHHHHCC------CeEECH--HHHHHHHHCCCCEEEEeCCCCC
Confidence 99999999999999 88999999999999999988754 688899 6999999999999999998883
No 213
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=99.87 E-value=1.4e-21 Score=200.46 Aligned_cols=161 Identities=17% Similarity=0.207 Sum_probs=122.4
Q ss_pred HHHHHcchHHHHHHHHHHhhhcCCccceeeecc-cccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCC
Q 005131 90 KACAAVGQNSIMALYDTLFSELDLTSAQLLVTD-NDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSG 168 (713)
Q Consensus 90 ~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g 168 (713)
+.+.++|+..+..++...|++.|+++..+-.+. ..........++.+.+..+...+.|||++|+ ... ..|
T Consensus 134 d~l~S~GE~~Sa~l~a~~L~~~Gi~A~~vD~~~~~~~~~~t~~~~i~~~~~~~~~~~~v~IvtGF--------~~~-~~G 204 (304)
T cd04248 134 ELLASLGEAHSAFNTALLLQNRGVNARFVDLSGWRDSGDMTLDERISEAFRDIDPRDELPIVTGY--------AKC-AEG 204 (304)
T ss_pred HHHhhhCHHHHHHHHHHHHHHCCCCeEEECcccccccCCCCcHHHHHHHHHhhccCCcEEEeCCc--------cCC-CCC
Confidence 366788888888899999999999876422211 0000011112333334433346789999982 111 233
Q ss_pred cc-----cchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CC--CCCcceeeeeccccchhhhcCCCCccccCchHHHH
Q 005131 169 IF-----WDNDSLAALLALELKADLLILLSDVEGLYSGPP-SD--PQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKV 240 (713)
Q Consensus 169 ~~-----~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~--~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl 240 (713)
.. ++||++|+.||.+|+|+.++|||||+ ||++|| .+ ++++.|++|||+||.||..+| ...+||
T Consensus 205 ~itTLGRGGSDyTAs~iAa~l~A~ev~I~TDV~-i~taDPriV~~~~A~~i~~lsY~EA~ELA~~G------akvLHP-- 275 (304)
T cd04248 205 LMREFDRGYSEMTFSRIAVLTGASEAIIHKEFH-LSSADPKLVGEDKARPIGRTNYDVADQLANLG------MEAIHP-- 275 (304)
T ss_pred CEEEcCCCcHHHHHHHHHHHcCCCEEEEECCCc-eecCCCCccCCCCceEeCccCHHHHHHHHHcC------hhhcCH--
Confidence 33 89999999999999999999999996 999999 77 689999999999999998755 899999
Q ss_pred HHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEE
Q 005131 241 KAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLF 277 (713)
Q Consensus 241 ~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i 277 (713)
+++.++++++||++|.|.++|+ ..||+|
T Consensus 276 ~ai~pa~~~~IPi~Vkntf~P~---------~~GTlI 303 (304)
T cd04248 276 KAAKGLRQAGIPLRVKNTFEPD---------HPGTLI 303 (304)
T ss_pred HHHHHHHHcCCeEEEecCCCCC---------CCCcee
Confidence 6999999999999999999883 558876
No 214
>PRK09181 aspartate kinase; Validated
Probab=99.86 E-value=1.3e-21 Score=216.33 Aligned_cols=160 Identities=19% Similarity=0.221 Sum_probs=124.4
Q ss_pred HHHHHcchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHh----CCceeEEcCCCceecCCCcccC
Q 005131 90 KACAAVGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLS----LRVIPVFNENDAVSTRKAPYED 165 (713)
Q Consensus 90 ~~~~~~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~----~g~vpV~~g~d~v~~~~~~~~~ 165 (713)
+.+.+.|+..+..++...|++.|+++..+-.+. +...... ...+.+...++ .+.|||++|+ +..
T Consensus 140 D~l~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~--~~~~~~~-~~~~~i~~~l~~~~~~~~v~Vv~GF--------~~~- 207 (475)
T PRK09181 140 EMLASIGEAHSAFNTALLLQNRGVNARFVDLTG--WDDDDPL-TLDERIKKAFKDIDVTKELPIVTGY--------AKC- 207 (475)
T ss_pred HHHhhHhHHHHHHHHHHHHHhCCCCeEEecccc--ccCCccc-chHHHHHHHHhhhccCCcEEEecCC--------cCC-
Confidence 567789999999999999999999886422111 1100000 01233444444 5889999983 111
Q ss_pred CCCcc-----cchhHHHHHHHhhhCCCEEEEeecCCccccCCC-CC--CCCcceeeeeccccchhhhcCCCCccccCchH
Q 005131 166 SSGIF-----WDNDSLAALLALELKADLLILLSDVEGLYSGPP-SD--PQSKLIDTYVKERHQGEITFGDKSRVGRGGMT 237 (713)
Q Consensus 166 ~~g~~-----~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP-~~--~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~ 237 (713)
..|.. ++|||+|+.||.+|+|+++.|||||+ |||+|| .+ |++++|++|||+|+.||..+| +++||
T Consensus 208 ~~G~itTLGRGGSDyTAailAa~L~A~~~~IwTDV~-I~taDPriV~~~~A~~i~~lsy~Ea~ELA~~G------AkVLH 280 (475)
T PRK09181 208 KEGLMRTFDRGYSEMTFSRIAVLTGADEAIIHKEYH-LSSADPKLVGEDKVVPIGRTNYDVADQLANLG------MEAIH 280 (475)
T ss_pred CCCCEEecCCChHHHHHHHHHHHcCCCEEEEeCCCc-cccCCCCcCCCCCCeEcCccCHHHHHHHHHcC------chhcC
Confidence 12322 89999999999999999999999997 999999 78 699999999999999998865 89999
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcceeEEec
Q 005131 238 AKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIGTLFHQ 279 (713)
Q Consensus 238 ~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~ 279 (713)
| +++.++++++||++|.|.++| +..||+|..
T Consensus 281 p--~ti~pa~~~~Ipi~V~nt~~p---------~~~GT~I~~ 311 (475)
T PRK09181 281 P--KAAKGLRQAGIPLRIKNTFEP---------EHPGTLITK 311 (475)
T ss_pred H--HHHHHHHHcCCeEEEecCCCC---------CCCCeEEec
Confidence 9 699999999999999999888 356999965
No 215
>KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.7e-19 Score=183.49 Aligned_cols=239 Identities=15% Similarity=0.182 Sum_probs=165.9
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccC-cc------------ccc
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLIN-SS------------FAD 79 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~-~~------------~~~ 79 (713)
.+|.|||||++..-+ .+ -.++.+... -...+++||-++....++.++...+... .. +..
T Consensus 80 ~~V~KFGGsSV~s~~------~~-i~v~~l~~~-~~~e~~~vV~SA~sk~Tna~~ta~~~~~~c~va~~~sie~l~iIke 151 (559)
T KOG0456|consen 80 TCVMKFGGSSVGSAE------RM-IEVAVLILY-FPDERPVVVLSAMSKTTNALLTAGEKAVCCGVANVESIEELSIIKE 151 (559)
T ss_pred EEEEecCCccccccc------hh-hhhhHHHHh-cCCCCeEEEEEccccchhhhhhhhhheecccccCcchHHHHHHHHH
Confidence 699999999998754 12 222233322 3357889999998888776554322110 00 000
Q ss_pred ccC--ccc-----------------------------cchHHHHHHcchHHHHHHHHHHhhhcCCcccee------eecc
Q 005131 80 LQK--PQI-----------------------------ELDGKACAAVGQNSIMALYDTLFSELDLTSAQL------LVTD 122 (713)
Q Consensus 80 ~~~--~~~-----------------------------~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~~~~------~~~~ 122 (713)
++. .+. .-.++++.++|++.+-.++...|+..|.++++. .++.
T Consensus 152 ~Hi~ta~e~~~d~~v~~~~le~leq~Lk~i~mm~Elt~RTrD~lvs~GE~lS~rf~aA~lnd~G~kar~~D~~~I~~~~~ 231 (559)
T KOG0456|consen 152 LHIRTAHELIVDPAVIAKLLEGLEQLLKGIAMMKELTLRTRDYLVSFGECLSTRFFAAYLNDIGHKARQYDAFEIGFITT 231 (559)
T ss_pred HHHhhHHHhccCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHhhhhhhHHHHHHHHHHHHhcCccceeechhheecccc
Confidence 000 000 011247788999999899999999999998754 2333
Q ss_pred cccCchhHHHHH-HHHH----HHHHhCCceeEEcCCCceecC-CCcccCCCCc-ccchhHHHHHHHhhhCCCEEEEeecC
Q 005131 123 NDFRDKEFRSQL-SETV----KSLLSLRVIPVFNENDAVSTR-KAPYEDSSGI-FWDNDSLAALLALELKADLLILLSDV 195 (713)
Q Consensus 123 ~~~~~~~~~~~~-~~~i----~~~l~~g~vpV~~g~d~v~~~-~~~~~~~~g~-~~~sD~~A~~lA~~l~Ad~li~~TdV 195 (713)
+++.+......- .... ........|||+.| +.+ +++..--.+. -+.+|.+|+.||.+|++|++.+|.||
T Consensus 232 d~~t~~d~~~a~~~av~k~~~~~~aken~VPVvTG----f~Gk~~~tg~lt~lGRG~sDl~At~i~~al~~~EiQVWKdV 307 (559)
T KOG0456|consen 232 DDFTNDDILEATYPAVSKLLSGDWAKENAVPVVTG----FLGKGWPTGALTTLGRGGSDLTATTIGKALGLDEIQVWKDV 307 (559)
T ss_pred ccccchhHHHHHHHHHHHhcccccccCCccceEee----ccccCccccceecccCCchhhHHHHHHHHcCchhhhhhhhc
Confidence 444332222211 1222 22245689999998 222 2332211110 18899999999999999999999999
Q ss_pred CccccCCC-CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHHhcCCcce
Q 005131 196 EGLYSGPP-SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKVLQGERIG 274 (713)
Q Consensus 196 ~GV~~~dP-~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tge~iG 274 (713)
|||+|+|| ++|.|+++|-++++||.|+..+| +.++|| .++.++.+..|||+|.|..+| ...|
T Consensus 308 DGv~T~DP~~~p~Ar~vp~lT~dEAaELaYfG------aqVlHP--~sM~~~~~~~IPvRvKN~~NP---------~~~G 370 (559)
T KOG0456|consen 308 DGVLTCDPRIYPGARLVPYLTFDEAAELAYFG------AQVLHP--FSMRPAREGRIPVRVKNSYNP---------TAPG 370 (559)
T ss_pred CceEecCCccCCCccccCccCHHHHHHHHhhh------hhhccc--cccchhhccCcceEeecCCCC---------CCCc
Confidence 99999999 99999999999999999988865 899999 799999999999999999888 5669
Q ss_pred eEEecC
Q 005131 275 TLFHQD 280 (713)
Q Consensus 275 T~i~~~ 280 (713)
|+|.++
T Consensus 371 TvI~~d 376 (559)
T KOG0456|consen 371 TVITPD 376 (559)
T ss_pred eEeccc
Confidence 999873
No 216
>cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria. Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily.
Probab=99.80 E-value=5.9e-19 Score=174.93 Aligned_cols=202 Identities=22% Similarity=0.283 Sum_probs=132.2
Q ss_pred EEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHHHH
Q 005131 15 VVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKACAA 94 (713)
Q Consensus 15 ViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 94 (713)
|||+|||++.+ +.++.+.++.+. |++++||.|||.-+.+..-.. ...+++......
T Consensus 1 vvKiGGsl~~~---------~~~~~~~l~~~~--~~~v~iV~GGG~~A~~~r~~~-------------~~~g~~~~~ad~ 56 (203)
T cd04240 1 VVKIGGSLIRE---------AVRLLRWLKTLS--GGGVVIVPGGGPFADVVRRYQ-------------ERKGLSDAAAHW 56 (203)
T ss_pred CEEEccccccc---------HHHHHHHHHhcc--CCCEEEEcCCcHHHHHHHHHH-------------HHcCCChHHHHH
Confidence 79999999865 346777776653 789999999998755542111 012233334444
Q ss_pred cchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcccchh
Q 005131 95 VGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIFWDND 174 (713)
Q Consensus 95 ~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~~~sD 174 (713)
+|...+.. ...+|.... .... . . -...+..++..|.+||+.|........ ....+..+++|
T Consensus 57 mgilat~~-na~~l~~~~--~~~~-~-----------~-~~~~~~~~~~~g~ipV~~P~~~~~~~~---~~~~~~~~ttD 117 (203)
T cd04240 57 MAILAMEQ-YGYLLADLE--PRLV-A-----------R-TLAELTDVLERGKIAILLPYRLLLDTD---PLPHSWEVTSD 117 (203)
T ss_pred HHHHHHHH-HHHHHhccC--Cccc-c-----------C-CHHHHHHHHHCCCcEEEeCchhhcccC---CCCcccccCHH
Confidence 44443331 111122111 0000 0 0 014477888999999998832221110 11222238999
Q ss_pred HHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEE
Q 005131 175 SLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVV 254 (713)
Q Consensus 175 ~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~ 254 (713)
++|+++|.+|+|++|+++|||||||++| +++|++|+.+|+.. .+.|.. ..+..+.++|++++
T Consensus 118 ~lAa~lA~~l~A~~Li~ltdVdGVy~~d-----a~~i~~i~~~e~~~-----------~~~id~--~~~~~~~~~gi~v~ 179 (203)
T cd04240 118 SIAAWLAKKLGAKRLVIVTDVDGIYEKD-----GKLVNEIAAAELLG-----------ETSVDP--AFPRLLTKYGIRCY 179 (203)
T ss_pred HHHHHHHHHcCCCEEEEEeCCccccCCC-----CcCccccCHHHhCC-----------CCeehh--hHHHHHHhCCCeEE
Confidence 9999999999999999999999999873 99999999876643 222322 12333578899999
Q ss_pred EEeCCCchhHHHHhcCC-cceeEE
Q 005131 255 ITSGYSDENILKVLQGE-RIGTLF 277 (713)
Q Consensus 255 I~~g~~~~~l~~~~tge-~iGT~i 277 (713)
|++++.|+++..++.|+ ..||.+
T Consensus 180 I~~g~~~~~l~~~l~g~~~~GT~I 203 (203)
T cd04240 180 VVNGDDPERVLAALRGREGVGTRI 203 (203)
T ss_pred EECCCCccHHHHHHCCCCCCCCCC
Confidence 99999999999999988 778864
No 217
>COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only]
Probab=99.53 E-value=1.4e-13 Score=127.36 Aligned_cols=206 Identities=18% Similarity=0.230 Sum_probs=129.3
Q ss_pred EEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHHHH
Q 005131 15 VVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKACAA 94 (713)
Q Consensus 15 ViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 94 (713)
|||.|||..... ...+.+.+..+ +.+++||.||+..++-.. +.. ...+.....-.+.++.+
T Consensus 3 vVk~~Gs~~~~~--------~~~~~~ale~~---~~~i~iVpGGg~FAd~VR-~id-------~~~~lSdsasHwmAI~~ 63 (212)
T COG2054 3 VVKKGGSGVAER--------AAAVKEALENL---QRSILIVPGGGIFADLVR-KID-------EEFGLSDSASHWMAITA 63 (212)
T ss_pred eEEecCCChHHH--------HHHHHHHHHhh---cceEEEecCchHHHHHHH-HHH-------HhcCCCccHHHHHHHHH
Confidence 788888887542 23444444433 447999999986555432 110 11222222333455666
Q ss_pred cchHHHHHHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcc-cch
Q 005131 95 VGQNSIMALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIF-WDN 173 (713)
Q Consensus 95 ~g~~~~~~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~-~~s 173 (713)
+.+.+.. +++...... . ..+++ .+.-.+.+..||+-|...+... ......+ ++|
T Consensus 64 Md~~G~~--lad~~~~~~---~-~tv~e---------------p~~~i~~~~~aVLLPyrlLr~~----DplpHSW~VTS 118 (212)
T COG2054 64 MDQYGFY--LADLASRFV---T-DTVTE---------------PEDGIKPDAKAVLLPYRLLRKT----DPLPHSWEVTS 118 (212)
T ss_pred HHHHHHH--HHhhhcccc---c-ceeec---------------hhhccCcccceEeeehHhhhcC----CCCCcceeecc
Confidence 6655543 333322221 0 11222 1122356777787653332221 1122223 899
Q ss_pred hHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcE
Q 005131 174 DSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPV 253 (713)
Q Consensus 174 D~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v 253 (713)
|.++.++|+++++.+++++|||||||+.+| +++++++|+.++.+. + -..+.+ -.-..+.+.++++
T Consensus 119 Dsis~~Ia~~~~~~~vv~aTDVdGI~~~~~---~~kLv~eI~A~dl~~----~------~t~vD~--~~P~Ll~k~~m~~ 183 (212)
T COG2054 119 DSISVWIAAKAGATEVVKATDVDGIYEEDP---KGKLVREIRASDLKT----G------ETSVDP--YLPKLLVKYKMNC 183 (212)
T ss_pred cHHHHHHHHHcCCcEEEEEecCCcccccCC---cchhhhhhhHhhccc----C------cccccc--hhhHHHHHcCCce
Confidence 999999999999999999999999999876 569999998877764 1 122233 2335577889999
Q ss_pred EEEeCCCchhHHHHhcCC-cceeEEec
Q 005131 254 VITSGYSDENILKVLQGE-RIGTLFHQ 279 (713)
Q Consensus 254 ~I~~g~~~~~l~~~~tge-~iGT~i~~ 279 (713)
+|+|+++|+++..++.|+ .+||.+.+
T Consensus 184 ~Vvng~~pervi~~lrGk~~v~T~Ivg 210 (212)
T COG2054 184 RVVNGKEPERVILALRGKEVVGTLIVG 210 (212)
T ss_pred EEECCCCHHHHHHHHhccccceEEEeC
Confidence 999999999999888885 67898875
No 218
>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=99.47 E-value=5.1e-11 Score=130.10 Aligned_cols=246 Identities=15% Similarity=0.158 Sum_probs=171.4
Q ss_pred eeeeeccceeEEEEecC-CchHHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEec--C-Cch
Q 005131 395 LEKTSCPLGVLLIVFES-RPDALVQIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVT--S-REE 470 (713)
Q Consensus 395 ~~~~~~P~GVv~~I~p~-~P~~~~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~--g-~~~ 470 (713)
.+.++.|.|+++.|.|- -|....+.++-+|.+||..|+|+|+..|.++..+.+.+.+..|..-=...+.++. | +.+
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~~~i~v~~~~~~d~~ 160 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLADSIAVVYWPGGDEE 160 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhhhcEEEEEecCCchH
Confidence 56789999999999999 7998887777899999999999999999999999999988866431123566773 4 456
Q ss_pred hHHhhhcCCCccEEEecCCHHHHHHHHHhc--CCCeEEecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEE
Q 005131 471 IPDLLKLDDVIDLVIPRGSNRLVSQIKEST--KIPVLGHADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLL 547 (713)
Q Consensus 471 ~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~--~~~v~lElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~ 547 (713)
+.+.+. ...|.++.+||.++.+.+.+.. .++.+.-..=.+-+++..+++++.+ ...+...+....|-|.|++.+|
T Consensus 161 ~~~~~~--~~~D~vv~wGgd~ti~~ir~~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~if 238 (399)
T PF05893_consen 161 LEEALS--QQADAVVAWGGDETIRAIRQPLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVIF 238 (399)
T ss_pred HHHHHH--HHCCEEEEeCCHHHHHHHHHHcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEEE
Confidence 677776 3599999999999999999853 2444433444556788888888887 6677777888899999999999
Q ss_pred EcCC---CchhHHHHHHHHH--------------------------------HhCCCEEEcCCccccccCCCCCCCcccc
Q 005131 548 IHQD---LVPTGFNELIDNL--------------------------------RSEGVTLYGGPRASSLLNIPEPNSFHHE 592 (713)
Q Consensus 548 V~~~---i~d~fi~~l~~~~--------------------------------~~~Ga~l~gg~~~~~~~~v~~~~~~~eE 592 (713)
|..+ -.++|-++|.+.+ ...+..++++....+.+-+.+.......
T Consensus 239 v~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~ 318 (399)
T PF05893_consen 239 VETGDGDSVEEFAERLAEALERAAERYPRGELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDNSWTVIVSPEPPLLPS 318 (399)
T ss_pred EECCCcccHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCEEEEECCCcccccC
Confidence 9933 3445666652211 1112222222111111112222233333
Q ss_pred ccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHh-ccCeee
Q 005131 593 YNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLR-QVDSAA 643 (713)
Q Consensus 593 ~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~-~l~~G~ 643 (713)
.++=.+.|.++++++|++..+|....=.|.+++... .+...+++ -...|.
T Consensus 319 pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv 369 (399)
T PF05893_consen 319 PLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGV 369 (399)
T ss_pred CCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCC
Confidence 445688999999999999999887432577886554 45555665 444554
No 219
>KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism]
Probab=99.01 E-value=8.6e-10 Score=117.96 Aligned_cols=245 Identities=18% Similarity=0.215 Sum_probs=151.1
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCccccc-ccCccccchH
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFAD-LQKPQIELDG 89 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 89 (713)
.+.+|+|-|+...++ .++.+++.++.++..|.++|||||.++++++. +..++... .+.+ .|.+.....+
T Consensus 95 q~fvV~~~g~~~~t~--------~~~sl~s~lafl~h~gl~pIvv~g~~~qin~~-l~~~~ie~-~y~~~~RvTda~t~q 164 (520)
T KOG2436|consen 95 QKFVVIKSGEAISTS--------LLHSLASDLAFLHHVGLRPIVVPGTQPQINRL-LAERGIEP-EYVDGYRVTDAHTLQ 164 (520)
T ss_pred ceEEEEecccccccc--------hHHHHHHHHHHHhcCCceEEEecCccHHHHHH-HHHcCCCc-ccccceecccHHHHH
Confidence 344555555555333 46889999999999999999999999999995 55555443 4444 5554422111
Q ss_pred HHHH-HcchHHHHHHHHHHhhhcCCccce----------------eeecccccCchhHHHHHH-HHHHHHHhCCceeEEc
Q 005131 90 KACA-AVGQNSIMALYDTLFSELDLTSAQ----------------LLVTDNDFRDKEFRSQLS-ETVKSLLSLRVIPVFN 151 (713)
Q Consensus 90 ~~~~-~~g~~~~~~l~~~~l~~~gi~~~~----------------~~~~~~~~~~~~~~~~~~-~~i~~~l~~g~vpV~~ 151 (713)
.+.. .+++.... +-..|++.|-.+.. .++...+|+..+....+. +.|..+++.|.+|++.
T Consensus 165 ~~~~~~~~E~n~~--lv~nL~~~g~~ar~~s~g~~v~~~f~a~~~~v~d~~~y~~~gei~~vd~d~i~~l~~~G~mp~L~ 242 (520)
T KOG2436|consen 165 AAKESVSLEANLN--LVINLSQLGTRARPSSSGVRVGNFFPADRNGVLDGEDYGLVGEIKKVDVDRIRHLLDAGSMPLLR 242 (520)
T ss_pred HhhhcchhhhhhH--HHHHHHHhhceeccccccccccceeecccccccccceeeeecccceechhhhhhhhhCCCchheh
Confidence 1111 23333222 22234444433311 123335677777777776 9999999999999997
Q ss_pred CCCceecCCCcccCCCCcc-cchhHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCc
Q 005131 152 ENDAVSTRKAPYEDSSGIF-WDNDSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSR 230 (713)
Q Consensus 152 g~d~v~~~~~~~~~~~g~~-~~sD~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~ 230 (713)
. ...+..+..+ +|+|..|..+|..|+++++++++|+ |..- ..+++.+..|+.+|...+++-...-.
T Consensus 243 s--------la~TaSGqvlnvNa~~~a~elA~~L~~~kli~l~d~-g~~l----~e~ge~~S~l~l~~e~~~l~k~~qq~ 309 (520)
T KOG2436|consen 243 S--------LAATASGQVLNVNADEVAGELALALGPDKLILLMDK-GRIL----KENGEDISSLILQEEDAGLRKPSQQK 309 (520)
T ss_pred h--------hcccCccceEEeeHHHHhhHHHhccCcceeEEeccc-cccc----ccCcccccccccchhHhhhhhhhhhc
Confidence 5 2222234444 9999999999999999999999998 5332 23577778888777766654433333
Q ss_pred cccCchHHHHHHHHHHHHcCCcEEEEeCCCchhH-HHHhcCCcceeEEecC
Q 005131 231 VGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENI-LKVLQGERIGTLFHQD 280 (713)
Q Consensus 231 ~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l-~~~~tge~iGT~i~~~ 280 (713)
.+++.+.++++....+......-+.......++. +..++++..+|.+...
T Consensus 310 ~~a~~~v~aV~~~~~~~~p~~~s~~i~~~t~~n~~~~~~te~G~~t~~~~g 360 (520)
T KOG2436|consen 310 NIAANNVKAVKDGIDSSLPRPSSYNIAITTQQNLIKELFTEKGAGTLISGG 360 (520)
T ss_pred ccccccchhhhhheeeccCcCCCCCcceeecccccceeeccCCCCccccCc
Confidence 5677777765555554221111122222223333 5677777667776653
No 220
>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]
Probab=98.78 E-value=2.2e-09 Score=94.95 Aligned_cols=78 Identities=17% Similarity=0.160 Sum_probs=70.5
Q ss_pred CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccCeeeEEEcCC-CCCCCCCCccCc
Q 005131 584 PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVDSAAVFHNAS-TRFCDGARFGLG 661 (713)
Q Consensus 584 ~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~-~~~~~~~pfGG~ 661 (713)
|+|.++.||+||||+..+.-.++||||.++|.++||-...|||.+.+.++.+.+..++|.+.+|.. +...+...|.|-
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~ 154 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGD 154 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceecccc
Confidence 999999999999999999999999999999999999999999999999999999999999999987 333344456554
No 221
>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=98.73 E-value=1.5e-07 Score=91.78 Aligned_cols=173 Identities=12% Similarity=0.067 Sum_probs=116.8
Q ss_pred ceEEEcCCCCHHHHHHHHHHccCCCCCccccCceEEEcCCCchhHHHHHH--------------------HHHHhCCCEE
Q 005131 512 CHIYVDKSADMDMAKQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELI--------------------DNLRSEGVTL 571 (713)
Q Consensus 512 ~p~iV~~dADl~~A~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~--------------------~~~~~~Ga~l 571 (713)
.-+||++|.|++.|...+..+.-+- -...+.-.|+|||++.|+|++++. +.+..-+++.
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~P-f~~~~VatVlVqEsireefi~rvr~~m~pl~~~va~Hpny~rsl~~i~~l~~~~ 84 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNP-FAPGAVATVLVQESIREEFIERVRSRMKPLSPQVANHPNYLRSLKKIKCLNAKT 84 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCc-ccCCcEEEEEEeHHHHHHHHHHHHHhCccCChhhccCcHHHHHHHHHHhcCCeE
Confidence 3489999999999977776664332 224467789999999999999884 3344457777
Q ss_pred -EcCCccccccCCCCCCC----cccccc----CceEEEEEeCCHHHHHHHHHcc--CCCceeEEEcCCHHHHHHHHhccC
Q 005131 572 -YGGPRASSLLNIPEPNS----FHHEYN----SMACTIEIVDDVHAAIGHIHQH--GSGHTDCIITNDSEAAEIFLRQVD 640 (713)
Q Consensus 572 -~gg~~~~~~~~v~~~~~----~~eE~F----gPvl~v~~~~~~~eAi~~~N~~--~~gL~a~v~t~d~~~a~~~~~~l~ 640 (713)
.++... .+...+++ +..-.| .+|+++.+|++..||+++++.. +|+ +.+||++-...+..++.+++
T Consensus 85 I~~~~~~---~~~~aSPilV~d~~h~~fg~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ekla~~Yel~~~l~ 160 (215)
T PF07368_consen 85 IVADFEN---VPPPASPILVCDFTHSYFGDGPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIWNEKLASAYELAARLP 160 (215)
T ss_pred EEecccC---CCCCCCCEEEcCCCHHHcCCCCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeCcHHHHHHHHHHhCC
Confidence 442211 11111111 122334 3799999999999999999975 555 99999999999999999999
Q ss_pred eeeEEEcCCC-CCCCCCCccCccc-eeeccccCCCcccchHhhceeEEEEEECC
Q 005131 641 SAAVFHNAST-RFCDGARFGLGAE-VGISTSRIHARGPVGVEGLLTTRWILKGS 692 (713)
Q Consensus 641 ~G~v~iN~~~-~~~~~~pfGG~k~-SG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 692 (713)
...+||||.. ...+-.++-..+. .-.=...||+ +.+...-+.|.|+...
T Consensus 161 ~~~f~iNC~~V~L~PI~~~~~~~~~~v~i~~gyHY---E~l~~~~~~k~IVFP~ 211 (215)
T PF07368_consen 161 CDTFYINCFNVDLSPIMPFFAARKNDVLIANGYHY---ETLTIGGKRKIIVFPI 211 (215)
T ss_pred CCEEEEEeccCCchhhhhhhhcCCceEEEECCeeE---EEEEECCeEEEEEEec
Confidence 9999999974 3444444332222 1111123342 5566666777777654
No 222
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=97.71 E-value=9.8e-05 Score=91.13 Aligned_cols=103 Identities=14% Similarity=0.194 Sum_probs=74.8
Q ss_pred cCCceeeeeeccceeEEEEecCCchHHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCc
Q 005131 390 ADGLFLEKTSCPLGVLLIVFESRPDALVQIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSRE 469 (713)
Q Consensus 390 ~~~~~~~~~~~P~GVv~~I~p~~P~~~~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~ 469 (713)
+.|..+.....|.|++++|+||... ....++.||++||+||+||++.++. .+ . .+|..+.+.+
T Consensus 1067 PTGEsN~L~l~~RG~vlcisp~~~~-~l~Qi~AALaaGn~vi~~~~~~~~~-------~~-~----~Lp~~~~~~~---- 1129 (1208)
T PRK11905 1067 PTGESNLLSLHPRGRVLCVADTEEA-LLRQLAAALATGNVAVVAADSGLAA-------AL-A----DLPGLVAARI---- 1129 (1208)
T ss_pred CCCcceeEEecCCceEEEECCcHHH-HHHHHHHHHHhCCEEEEeCCcccHH-------HH-H----hCcccccccc----
Confidence 3566778899999999999999522 3356677999999999999998762 11 1 2343344444
Q ss_pred hhHHhhhcCCCccEEEecCCHHHHHHHHHhc------CCCeEEecC
Q 005131 470 EIPDLLKLDDVIDLVIPRGSNRLVSQIKEST------KIPVLGHAD 509 (713)
Q Consensus 470 ~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~------~~~v~lElg 509 (713)
.+++.+..++.++.|.||||+.+.+.+.++. ..|++.|..
T Consensus 1130 ~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1130 DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 2334566778999999999999999887652 367766664
No 223
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=97.11 E-value=0.1 Score=56.81 Aligned_cols=286 Identities=14% Similarity=0.157 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC--CchH--HHHHHHHHHHhCCEEEEe--C
Q 005131 361 GKISSLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES--RPDA--LVQIAALAIRSGNGLLLK--G 434 (713)
Q Consensus 361 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~--~P~~--~~~~~~~ALaaGN~vv~K--p 434 (713)
.-++.+++.++.|.....+...... ...+|.....++.|+--|++..|- +|+. ....+.||-.||..=|+- |
T Consensus 68 ~Ai~~A~~~I~~fh~~q~~~~~~~~--~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TP 145 (412)
T PF00815_consen 68 EAIEQAAENIRAFHEAQLPKKDWEV--ETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTP 145 (412)
T ss_dssp HHHHHHHHHHHHHHHTT-----EEE--EEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEE--EecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcC
Confidence 3455667777777653332111111 113577777899999999999996 5554 347788999999765544 4
Q ss_pred CCCchHHHHHHHHHHHHhccccCCCCeEEEec-CCc-hhHHhh---hcCCCccEEEecCCHHHHH--HH-HHhcCCCeEE
Q 005131 435 GKEAKRSNAILHKIITEVIPENVGERLIGLVT-SRE-EIPDLL---KLDDVIDLVIPRGSNRLVS--QI-KESTKIPVLG 506 (713)
Q Consensus 435 s~~~~~~~~~l~~~~~~al~~glP~g~v~vv~-g~~-~~~~~l---~~~~~v~~v~fTGs~~~g~--~i-~~~~~~~v~l 506 (713)
....-...-.+.-..+.+ | +=.+.. |+. .++.+- ..=|+||+|+=-|..=+.. +. ....++-. +
T Consensus 146 p~~~G~i~p~vL~Aa~~~---G----v~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID~-~ 217 (412)
T PF00815_consen 146 PPKDGKINPAVLAAAHLA---G----VDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGIDM-I 217 (412)
T ss_dssp SS------HHHHHHHHHT---T-----SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES---
T ss_pred CCccCCCCHHHHHHHHHc---C----CCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccCC-C
Confidence 433111111111223334 4 323333 653 333321 2348999999888865432 22 22211111 1
Q ss_pred ecCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccCCCC
Q 005131 507 HADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLNIPE 585 (713)
Q Consensus 507 ElgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~v~~ 585 (713)
....---+|-+++||.+.. .+.+..+==... | .-++|..+ +++.+++.++..++=..+ +.
T Consensus 218 AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~----a-~~vLvt~s--~~la~~V~~~v~~~l~~l------------~r 278 (412)
T PF00815_consen 218 AGPSEVLVIADETANPEFVAADLLAQAEHDPD----A-QAVLVTTS--EELAEAVEAEVERQLEEL------------PR 278 (412)
T ss_dssp ----EEEEEE-TTS-HHHHHHHHHHHHTT-TT------EEEEEES---HHHHHHHHHHHHHHHTT-------------TT
T ss_pred CCCCceEEEECCCCCHHHHHHHHHHHhccCCC----C-ceEEEECC--HHHHHHHHHHHHHHHHhC------------Cc
Confidence 1111112455678999998 555554421111 1 23555555 566666655443321111 00
Q ss_pred CCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc-CeeeEEEcCCCC---------CCCC
Q 005131 586 PNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV-DSAAVFHNASTR---------FCDG 655 (713)
Q Consensus 586 ~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~---------~~~~ 655 (713)
. ..-++-+. --.++.++|++||++++|..-- =...|.++|. ..+..++ .+|.|++..++. .+.-
T Consensus 279 ~-~i~~~sl~-~g~ii~~~~l~ea~~~~N~~AP-EHLel~~~~~---~~~~~~i~~AGaiFlG~~tp~a~GDY~aGpNHv 352 (412)
T PF00815_consen 279 R-EIAEKSLE-NGAIIVVDSLEEAIELANEYAP-EHLELQVEDP---EELLEKIRNAGAIFLGEYTPEALGDYAAGPNHV 352 (412)
T ss_dssp H-HHHHHHHT-T-EEEE-SSHHHHHHHHHHH---SEEEEESTTH---HHHGGG--S-SEEEESTT--HHHHHHTSSS---
T ss_pred h-HHHHHHHH-CCeEEEECCHHHHHHHHHHhhH-HHHHHHHcCH---HHHHHHhhccChhhcCCCCCHHHhhhccCCCcc
Confidence 0 01122222 2347788999999999999753 3678999996 4566666 489999998642 2344
Q ss_pred CCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 656 ARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 656 ~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+|-+ |..| ..|.-+...|++.-++..
T Consensus 353 LPT~-----G~AR----~~sgLsv~~FlK~~s~~~ 378 (412)
T PF00815_consen 353 LPTG-----GTAR----FSSGLSVDDFLKRISVQR 378 (412)
T ss_dssp ---T-----TGGG----T---S-GGGGEEEEEEEE
T ss_pred CCCC-----cccc----ccCCCcHHHccceeeEEE
Confidence 6666 4455 567778888988777654
No 224
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=96.55 E-value=0.41 Score=51.71 Aligned_cols=282 Identities=16% Similarity=0.168 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC--CchHH--HHHHHHHHHhCCEEEEe--CC
Q 005131 362 KISSLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES--RPDAL--VQIAALAIRSGNGLLLK--GG 435 (713)
Q Consensus 362 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~--~P~~~--~~~~~~ALaaGN~vv~K--ps 435 (713)
-++.+.+.++.|.....+...... ..+|.....++.|+--|++..|. .|+.. ...+.||-.||+.=|+- |.
T Consensus 52 ai~~A~~~I~~fh~~q~~~~~~~~---~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp 128 (393)
T TIGR00069 52 ALELAAENIRAFHEAQLPRSWEVE---TEPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPP 128 (393)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEe---cCCCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 345556666666542222211111 13566777899999999999998 56543 47778999999875544 44
Q ss_pred CC-chHHHHHHHHHHHHhccccCCCCeEEEec-CCchhHHhh----hcCCCccEEEecCCHHHHHHHHHhcCCCeEEe-c
Q 005131 436 KE-AKRSNAILHKIITEVIPENVGERLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNRLVSQIKESTKIPVLGH-A 508 (713)
Q Consensus 436 ~~-~~~~~~~l~~~~~~al~~glP~g~v~vv~-g~~~~~~~l----~~~~~v~~v~fTGs~~~g~~i~~~~~~~v~lE-l 508 (713)
.. ....-..|+ ..+.+ | +=.+.. |+...-.+| .+=|+||+|+=-|..=+..+=..-.+ .|-.. +
T Consensus 129 ~~~g~i~p~iL~-AA~~~---G----v~eIy~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g-~V~ID~~ 199 (393)
T TIGR00069 129 GKDGKINPAVLA-AAKLA---G----VDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFG-DVGIDMP 199 (393)
T ss_pred CcCCCCCHHHHH-HHHHc---C----CCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC-ccCcCCC
Confidence 21 112222222 23444 4 333444 653322333 34589999998888764332222111 11111 1
Q ss_pred Cccc--eEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccCCCC
Q 005131 509 DGIC--HIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLNIPE 585 (713)
Q Consensus 509 gG~~--p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~v~~ 585 (713)
-|.+ .+|-+++||.+.. .+.+..+= + |- .| +-++|..+ .++.+++.++..++=..+ +.
T Consensus 200 AGPSEvlViAD~~Anp~~iAaDLLaQAE-H-d~--~a-~~iLvT~s--~~la~~V~~~v~~ql~~l------------~r 260 (393)
T TIGR00069 200 AGPSEVLVIADETANPEFVAADLLSQAE-H-DP--DA-QAILVTTS--EELAEAVQEEIERQLATL------------PR 260 (393)
T ss_pred CCCceEEEEeCCCCCHHHHHHHHHHHhc-c-CC--CC-cEEEEECC--HHHHHHHHHHHHHHHHhC------------Ch
Confidence 2222 2455567999998 55554431 1 11 11 33455443 334444433322111101 00
Q ss_pred CCCccc--cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc-CeeeEEEcCCCCC---------C
Q 005131 586 PNSFHH--EYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV-DSAAVFHNASTRF---------C 653 (713)
Q Consensus 586 ~~~~~e--E~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~~---------~ 653 (713)
..+.++ +-+|= ++.++|++||++++|..-- -..-|+++|. ..+..++ .+|.|++..++.. +
T Consensus 261 ~~i~~~al~~~g~---ii~v~~l~ea~~~~N~~AP-EHLel~~~~p---~~~l~~I~nAGaiFlG~~tp~a~GDY~aG~N 333 (393)
T TIGR00069 261 REIARKSLEDNGA---IILVDDLEEAIEISNDYAP-EHLELQTKNP---EELLPKIRNAGSIFLGPYTPEAAGDYAAGPN 333 (393)
T ss_pred HHHHHHHHHhCCE---EEEECCHHHHHHHHHhhCh-HhheehhCCH---HHHHhhcCccceeccCCCCchhhhhccCCCC
Confidence 011111 11343 4678999999999998643 2466888885 4455666 4899999876431 2
Q ss_pred CCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 654 DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 654 ~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
.-+|-| |..| ..|.-+.+.|.+.-++..
T Consensus 334 HvLPT~-----G~Ar----~~sgL~v~~F~K~~s~~~ 361 (393)
T TIGR00069 334 HVLPTG-----GTAR----FYSGLSVLDFLKRITVQR 361 (393)
T ss_pred cccCCC-----ccee----ecCCccHHHhccceeEEE
Confidence 335554 5566 567778888887766653
No 225
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=96.48 E-value=0.57 Score=50.78 Aligned_cols=285 Identities=14% Similarity=0.157 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC--CchHH--HHHHHHHHHhCCEEEEe--CC
Q 005131 362 KISSLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES--RPDAL--VQIAALAIRSGNGLLLK--GG 435 (713)
Q Consensus 362 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~--~P~~~--~~~~~~ALaaGN~vv~K--ps 435 (713)
.++.+.+.++.|.....+...... ..+|.....+..|+--|++..|- +|+.. ...+.||-.||+.=|+- |.
T Consensus 56 ai~~A~~nI~~fh~~q~~~~~~~~---~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 132 (390)
T cd06572 56 AIELAAENIRAFHEAQLPKDWEVE---TEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPP 132 (390)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEE---eCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCc
Confidence 455666777777653222211111 12577778899999999999997 56543 47778999999865544 44
Q ss_pred CCc-hHHHHHHHHHHHHhccccCCCCeEEEec-CCchhHHhh----hcCCCccEEEecCCHHHHHHHHHhcC-CCeEEec
Q 005131 436 KEA-KRSNAILHKIITEVIPENVGERLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNRLVSQIKESTK-IPVLGHA 508 (713)
Q Consensus 436 ~~~-~~~~~~l~~~~~~al~~glP~g~v~vv~-g~~~~~~~l----~~~~~v~~v~fTGs~~~g~~i~~~~~-~~v~lEl 508 (713)
... ......|+ ..+.+ | +=.+.. |+...-.+| .+-|.||+|+=.|..-+..+=..-.+ .-+=+-.
T Consensus 133 ~~~g~i~p~iL~-aa~~~---G----v~eiy~vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g~V~ID~~A 204 (390)
T cd06572 133 RKDGKINPAILA-AAKLA---G----VDEIYKVGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSGDVGIDMPA 204 (390)
T ss_pred CCCCCCCHHHHH-HHHHc---C----CcEEeccCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcCCcCccCCC
Confidence 321 11122222 22333 4 344444 653333333 24689999998888654333222211 1111111
Q ss_pred Cccc-eEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccCCCCC
Q 005131 509 DGIC-HIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLNIPEP 586 (713)
Q Consensus 509 gG~~-p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~v~~~ 586 (713)
|-.. -+|.+++||.+.. .+.+..+= + | -.| +-++|..+ .++.+++.++..++-..+ +..
T Consensus 205 GPSEvlIiAD~~A~p~~vAaDLLaQAE-H-~--~~a-~aiLvT~s--~~la~~V~~~v~~ql~~l------------~r~ 265 (390)
T cd06572 205 GPSEVLVIADETANPEFVAADLLSQAE-H-D--PDS-QAILVTTS--EELAEAVEEEVERQLAEL------------PRR 265 (390)
T ss_pred CCceEEEEeCCCCCHHHHHHHHHhhhc-c-C--CCC-eEEEEECC--HHHHHHHHHHHHHHHHhC------------CcH
Confidence 1111 2455556999998 45544331 1 1 112 33555543 445555544333221111 000
Q ss_pred CCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc-CeeeEEEcCCCCC---------CCCC
Q 005131 587 NSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV-DSAAVFHNASTRF---------CDGA 656 (713)
Q Consensus 587 ~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~~---------~~~~ 656 (713)
.+..+.+ .---.++.++|++||++++|..-- -..-|+++|... +..++ .+|.|++-.++.. +.-+
T Consensus 266 ~~~~~~~-~~~g~ii~~~~~~eai~~~N~~AP-EHLel~~~~~~~---~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvL 340 (390)
T cd06572 266 EIAAKSL-LDYGAIILVDDLEEAIELANEYAP-EHLELQTEDPEE---LLEKIRNAGSIFLGPYTPEALGDYAAGPNHVL 340 (390)
T ss_pred HHHHHHH-HhCCEEEEECCHHHHHHHHHhhch-hhheeHhcCHHH---HHhhCccceEEeecCCCchhhhccccCCCCcc
Confidence 0111111 112245678999999999998643 357788888654 55555 5899999876421 2346
Q ss_pred CccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 657 RFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 657 pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
|.+ |..| ..|.-+.+.|++.-++..
T Consensus 341 PT~-----G~Ar----~~sgL~v~~F~K~~s~~~ 365 (390)
T cd06572 341 PTG-----GTAR----FYSGLSVDDFLKRITVQE 365 (390)
T ss_pred CCC-----ccee----ecCCCCHHHheecceeEE
Confidence 655 5566 567778888887776653
No 226
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=96.35 E-value=0.23 Score=53.61 Aligned_cols=281 Identities=13% Similarity=0.139 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC----CchHHHHHHHHHHHhCCEEEEe--CC
Q 005131 362 KISSLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES----RPDALVQIAALAIRSGNGLLLK--GG 435 (713)
Q Consensus 362 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~----~P~~~~~~~~~ALaaGN~vv~K--ps 435 (713)
-++.+++.++.|-....+..... ...+|.....+..|+--|++..|- ||........||-.+|+.=|+- |.
T Consensus 80 ai~~A~~~I~~fH~~Q~p~~~~~---~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~~tPp 156 (425)
T COG0141 80 ALEVAAENIEAFHEAQLPKDWLV---ETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPP 156 (425)
T ss_pred HHHHHHHHHHHHHHhhCCCccce---eccCCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEEECCC
Confidence 34556666766654222211111 123577777899999999999994 5655567777999999875544 44
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCeEEEec-CCchhHHhhhc----CCCccEEEecCCHHHHHHHHHhcC-CCeEEecC
Q 005131 436 KEAKRSNAILHKIITEVIPENVGERLIGLVT-SREEIPDLLKL----DDVIDLVIPRGSNRLVSQIKESTK-IPVLGHAD 509 (713)
Q Consensus 436 ~~~~~~~~~l~~~~~~al~~glP~g~v~vv~-g~~~~~~~l~~----~~~v~~v~fTGs~~~g~~i~~~~~-~~v~lElg 509 (713)
+..-.....|+ ..+.+ | +=.+.. |+...-.+|.- =|.||+|.=-|..-+.-+=..-.+ .-+=+..|
T Consensus 157 ~~~gv~p~iL~-AA~~~---G----v~eIy~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g~V~ID~~AG 228 (425)
T COG0141 157 PKDGVNPEILA-AARLA---G----VDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSGVVGIDMIAG 228 (425)
T ss_pred CCCCCCHHHHH-HHHHh---C----cHHHHHccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhCCcccCCCCC
Confidence 43111111111 12223 3 111222 55333334432 378999998888764322222111 11112222
Q ss_pred ccce-EEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccCCCCCC
Q 005131 510 GICH-IYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLNIPEPN 587 (713)
Q Consensus 510 G~~p-~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~v~~~~ 587 (713)
=..- +|-+++||.+.. .+.+..+= + | -.| +-++|..+ ++|.+++.++..++-..+ +...
T Consensus 229 PSEvlViAD~ta~p~~vA~DLLsQAE-H-d--~~a-~aiLvT~s--~~la~~v~~~v~~~l~~l------------~~~e 289 (425)
T COG0141 229 PSEVLVIADETANPDFVAADLLSQAE-H-D--PDA-QAILVTDS--EELAEAVEAAVERQLETL------------PRAE 289 (425)
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHhh-c-C--CCc-eEEEEeCc--HHHHHHHHHHHHHHHHhc------------cHHH
Confidence 2222 444556999998 45444331 1 1 122 33555554 455565543332211111 0000
Q ss_pred Cccc--cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc-CeeeEEEcCCCCC---------CCC
Q 005131 588 SFHH--EYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV-DSAAVFHNASTRF---------CDG 655 (713)
Q Consensus 588 ~~~e--E~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~~---------~~~ 655 (713)
+..+ +-|| .|+-++|++||++++|..- +-..-|.++|.. .+..++ .+|.|++..++.. +.-
T Consensus 290 i~~~~l~~~g---~iilv~~l~ea~~~~N~~A-PEHLei~~~~p~---~~l~~I~nAGsIFlG~~sPe~~GDY~aG~NHV 362 (425)
T COG0141 290 IARKALENYG---AIILVDDLDEAVEISNEYA-PEHLELQTENPR---ELLGKIRNAGSIFLGHYSPESLGDYAAGPNHV 362 (425)
T ss_pred HHHHHHHhCC---eEEEECCHHHHHHHHHhhC-hHhhhhhhcCHH---HHHHHhcccceeeecCCCCccccccccCCCcc
Confidence 1111 1233 4667899999999999864 345778888855 456666 4899999987432 123
Q ss_pred CCccCccceeeccccCCCcccchHhhceeEEEE
Q 005131 656 ARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 688 (713)
Q Consensus 656 ~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v 688 (713)
+|-+ |.-| ..|.-++..|+..-++
T Consensus 363 LPT~-----g~AR----~~s~L~v~dF~K~~tv 386 (425)
T COG0141 363 LPTS-----GTAR----FSSGLSVYDFLKRSTV 386 (425)
T ss_pred CCCC-----ccch----hcCCccHHHhhhHHHH
Confidence 4444 5555 5567777888765544
No 227
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=96.33 E-value=0.67 Score=50.64 Aligned_cols=281 Identities=15% Similarity=0.162 Sum_probs=153.9
Q ss_pred HHHHHHHHHHHHhcccCcccc-ccccccccCCceeeeeeccceeEEEEecC--CchHH--HHHHHHHHHhCCEEEEe--C
Q 005131 362 KISSLANSVRVLANMEDPIGH-ILKKTQLADGLFLEKTSCPLGVLLIVFES--RPDAL--VQIAALAIRSGNGLLLK--G 434 (713)
Q Consensus 362 ev~~~~~~l~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~p~--~P~~~--~~~~~~ALaaGN~vv~K--p 434 (713)
-++.+.+.++.|.....+... +.. ...+|.....++.|+--|++..|- +|+.. ...+.||-.||+.=|+- |
T Consensus 77 ai~~A~~nI~~fh~~q~~~~~~~~~--~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TP 154 (426)
T PRK12447 77 DIRFAQDQVRRFAEAQRDSLQDLEV--ETLPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTP 154 (426)
T ss_pred HHHHHHHHHHHHHHHhcCCCCceEE--ecCCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeC
Confidence 455666677766542222110 110 013566777899999999999997 56543 47888999999865544 4
Q ss_pred CCCchHHHHHHHHHHHHhccccCCCCeEEEec-CCchhHHhh----hcCCCccEEEecCCHHHHHHHHHhc---CCCeEE
Q 005131 435 GKEAKRSNAILHKIITEVIPENVGERLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNRLVSQIKEST---KIPVLG 506 (713)
Q Consensus 435 s~~~~~~~~~l~~~~~~al~~glP~g~v~vv~-g~~~~~~~l----~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~l 506 (713)
..........|+ ..+.+ | +=.+.. |+...-.+| .+-|.||+|+=-|..=+..+=..-. ++-..
T Consensus 155 p~~~~i~p~iL~-Aa~~~---G----v~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~~- 225 (426)
T PRK12447 155 PFPGEPPPAIVA-AMHLA---G----ADEIYVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFGRVGIDLF- 225 (426)
T ss_pred CCCCCCCHHHHH-HHHHc---C----CCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcCCC-
Confidence 432112222233 22444 4 333333 653322233 3458999999888876433222211 12211
Q ss_pred ecCccc--eEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccCC
Q 005131 507 HADGIC--HIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLNI 583 (713)
Q Consensus 507 ElgG~~--p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~v 583 (713)
-|.+ -+|-+++||.+.. .+.+..+= + |- .+ +-++|..+ .++.+++.++..++-..+
T Consensus 226 --AGPSEvlViAD~~Anp~~vAaDLLaQAE-H-d~--~a-~~iLvT~s--~~la~~V~~~v~~ql~~l------------ 284 (426)
T PRK12447 226 --AGPTETLVIADDTADPELVATDLLGQAE-H-GP--NS-PAVLITTS--RKLAEEVLAEIERLLAIL------------ 284 (426)
T ss_pred --CCCceeEEEeCCCCCHHHHHHHHHHHhc-c-CC--CC-ceEEEECC--HHHHHHHHHHHHHHHHhC------------
Confidence 1222 2455556999998 55554431 1 11 11 23455443 345555543332211111
Q ss_pred CCCCCccc--cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc-CeeeEEEcCCCCC--------
Q 005131 584 PEPNSFHH--EYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV-DSAAVFHNASTRF-------- 652 (713)
Q Consensus 584 ~~~~~~~e--E~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~~-------- 652 (713)
+...+.++ +-+|= |+-++|++||++++|..--= ...|.++|. ..+..++ .+|.|++..++..
T Consensus 285 ~r~~i~~~sl~~~g~---ii~v~~l~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiFlG~~sp~a~GDY~aG 357 (426)
T PRK12447 285 PTADVASAAWRDYGE---VILCDDLEEMVAEADRYASE-HVQVMTEDP---DWFLENMTNYGALFLGERTNVAYGDKVIG 357 (426)
T ss_pred CHHHHHHHHHHhCCE---EEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCccceeccCCCCchhhhhcccC
Confidence 00001111 22343 46789999999999986433 466888886 4566666 4899999765321
Q ss_pred -CCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 653 -CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 653 -~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+.-+|-| |..| ..|.-+.+.|.+.-++..
T Consensus 358 pNHvLPT~-----G~Ar----~~sgLsv~~FlK~~s~~~ 387 (426)
T PRK12447 358 TNHVLPTS-----GAAR----YTGGLWVGKFLKTVTYQR 387 (426)
T ss_pred CCcccCCC-----ccee----ecCCCcHHHhccceeEEE
Confidence 2335554 5566 667788888887766553
No 228
>PLN02926 histidinol dehydrogenase
Probab=96.28 E-value=0.61 Score=51.03 Aligned_cols=285 Identities=12% Similarity=0.138 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC--CchHH--HHHHHHHHHhCCEEEE--eCC
Q 005131 362 KISSLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES--RPDAL--VQIAALAIRSGNGLLL--KGG 435 (713)
Q Consensus 362 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~--~P~~~--~~~~~~ALaaGN~vv~--Kps 435 (713)
-++.+.+.++.|.....+... .... ..+|.....+..|+.-|++..|. +|+.. ...+.||-.||+.=|+ -|.
T Consensus 83 ai~~A~~nI~~fh~~q~~~~~-~~~~-~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 160 (431)
T PLN02926 83 AFDVAYDNIYAFHLAQKSTEK-LEVE-TMPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPP 160 (431)
T ss_pred HHHHHHHHHHHHHHHhCCCCc-ceEe-cCCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECC
Confidence 455666777777653222211 0111 13566777899999999999998 56643 4788899999986554 454
Q ss_pred CC-chHHHHHHHHHHHHhccccCCCCeEEEec-CCchhHHhh----hcCCCccEEEecCCHHHHHHHHHhcCCC--eEEe
Q 005131 436 KE-AKRSNAILHKIITEVIPENVGERLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNRLVSQIKESTKIP--VLGH 507 (713)
Q Consensus 436 ~~-~~~~~~~l~~~~~~al~~glP~g~v~vv~-g~~~~~~~l----~~~~~v~~v~fTGs~~~g~~i~~~~~~~--v~lE 507 (713)
.. .......|+ ..+.+ | +=.+.. |+...-.+| .+=|+||+|+=-|..=+..+=..-.+.+ |-..
T Consensus 161 ~~~g~i~p~iL~-AA~~~---G----v~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G~~~~VgID 232 (431)
T PLN02926 161 RKDGSICPEVLY-CAKKA---G----VTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQNSEAMVSID 232 (431)
T ss_pred CcCCCCCHHHHH-HHHHc---C----CCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhCCCCccccC
Confidence 32 112222233 23444 4 333434 653322233 3457999999888876433222222221 2111
Q ss_pred -cCccce--EEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccCC
Q 005131 508 -ADGICH--IYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLNI 583 (713)
Q Consensus 508 -lgG~~p--~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~v 583 (713)
+-|.+= +|-+++||.+.+ .+.+..+= +.. .+ +-++|..+ .++.+++.++..++=..+
T Consensus 233 ~~AGPSEvlIiAD~tA~p~~vAaDLLaQAE-Hdp---~a-~aiLvT~s--~~la~~V~~~v~~ql~~l------------ 293 (431)
T PLN02926 233 MPAGPSEVLVIADKTANPVHVAADLLSQAE-HGP---DS-QVVLVAVG--DVDLDAIEEEVEKQCQSL------------ 293 (431)
T ss_pred CCCCCceeEEEeCCCCCHHHHHHHHHHHhc-cCC---CC-cEEEEECC--HHHHHHHHHHHHHHHHhC------------
Confidence 123332 344456999998 55554431 111 11 33555544 345555443332211111
Q ss_pred CCCCCccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc-CeeeEEEcCCCCC---------C
Q 005131 584 PEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV-DSAAVFHNASTRF---------C 653 (713)
Q Consensus 584 ~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~~---------~ 653 (713)
+...+. ++-+.. -.|+.++|++||++++|..-- -...|+++|.. .+..++ .+|.|++..++.. +
T Consensus 294 ~r~~i~-~~sl~~-g~iivv~~l~ea~~~~N~~AP-EHLei~~~~~~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpN 367 (431)
T PLN02926 294 PRGEIA-SKALGH-SFIVVARDMAEAISFSNLYAP-EHLIVNVEDAE---SWLDKIDNAGSVFLGRWTPESVGDYASGTN 367 (431)
T ss_pred ChHHHH-HHHHHC-CEEEEECCHHHHHHHHHhhCh-HhheehhcCHH---HHHhhcCccceeccCCCCchhhhccccCcC
Confidence 101111 122222 456789999999999998642 34668888864 455666 5899999765321 2
Q ss_pred CCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 654 DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 654 ~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
.-+|-| |..| ..|.-+.+.|++.-++..
T Consensus 368 HvLPT~-----G~AR----~~sgLsv~~FlK~~s~~~ 395 (431)
T PLN02926 368 HVLPTY-----GYAR----MYGGVSLDSFLKYMTVQS 395 (431)
T ss_pred cccCCC-----ccee----ecCCCcHHHhcceeeEEE
Confidence 335555 5566 667788888888766654
No 229
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=96.24 E-value=0.6 Score=51.07 Aligned_cols=280 Identities=16% Similarity=0.183 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC--CchHH--HHHHHHHHHhCCEEEEe--CC
Q 005131 362 KISSLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES--RPDAL--VQIAALAIRSGNGLLLK--GG 435 (713)
Q Consensus 362 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~--~P~~~--~~~~~~ALaaGN~vv~K--ps 435 (713)
-++.+.+.++.|.....+...... ..+|...-.++.|+--|++..|. .|+.. ...+.||-.||+.=|+- |.
T Consensus 84 ai~~A~~~I~~Fh~~q~~~~~~~~---~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 160 (425)
T PRK00877 84 ALEEAAENIRAFHEAQKPESWDVE---TAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPP 160 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEE---ecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 455666777777653222111110 13566777899999999999998 56543 47888999999865544 44
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCeEEEec-CCchhHHhh----hcCCCccEEEecCCHHHH--HHH-HHhcCCCeEEe
Q 005131 436 KEAKRSNAILHKIITEVIPENVGERLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNRLV--SQI-KESTKIPVLGH 507 (713)
Q Consensus 436 ~~~~~~~~~l~~~~~~al~~glP~g~v~vv~-g~~~~~~~l----~~~~~v~~v~fTGs~~~g--~~i-~~~~~~~v~lE 507 (713)
.........|+ ..+.+ | +=.+.. |+...-.+| .+-|.||+|+=-|..=+. |+. ....++-..
T Consensus 161 ~~g~i~p~vL~-AA~~~---G----v~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~~-- 230 (425)
T PRK00877 161 PDGEINPAILA-AAALA---G----VDEVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGVVGIDMI-- 230 (425)
T ss_pred CCCCCCHHHHH-HHHHc---C----CCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCCcCcCCC--
Confidence 31111222222 23444 4 333333 653322333 345899999988886543 222 111112111
Q ss_pred cCccce--EEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccCCC
Q 005131 508 ADGICH--IYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLNIP 584 (713)
Q Consensus 508 lgG~~p--~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~v~ 584 (713)
-|.+= +|-+++||.+.. .+.+..+= + |- .| +-++|..+ .++.+++.++..++-..+ +
T Consensus 231 -AGPSEvlViAD~~Anp~~vAaDLLaQAE-H-d~--~a-~aiLvT~s--~~la~~V~~~v~~ql~~l------------~ 290 (425)
T PRK00877 231 -AGPSEILVIADETADPDFVAADLLSQAE-H-DP--DA-QSILVTTS--EELAEAVAAEVERQLATL------------P 290 (425)
T ss_pred -CCCceeEEEeCCCCCHHHHHHHHHHHhc-c-CC--CC-cEEEEECC--HHHHHHHHHHHHHHHHhC------------C
Confidence 12222 444556999998 55554431 1 11 11 33555444 345555443332211111 0
Q ss_pred CCCCccc--cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc-CeeeEEEcCCCCC---------
Q 005131 585 EPNSFHH--EYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV-DSAAVFHNASTRF--------- 652 (713)
Q Consensus 585 ~~~~~~e--E~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~~--------- 652 (713)
...+.++ +-+|= |+.++|+|||++++|..-- =...|.++|.. .+..++ .+|.|++-.++..
T Consensus 291 r~~ia~~sl~~~g~---iivv~~leeai~~~N~~AP-EHLel~~~~p~---~~l~~I~nAGaiFlG~~tp~a~GDY~aGp 363 (425)
T PRK00877 291 RAEIARASLEGQGA---IILVDDLEEAIELSNAYAP-EHLEIQTEDPR---ALLDRIRNAGAIFLGPYTPESLGDYAAGP 363 (425)
T ss_pred hHHHHHHHHHhCCE---EEEECCHHHHHHHHHhhCh-HheeehhCCHH---HHHhhcCccceeccCCCCchhhhhcccCC
Confidence 0011111 22443 4678999999999998643 34678888864 455665 5899999775421
Q ss_pred CCCCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 653 CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 653 ~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
+.-+|-| |..| ..|.-+.+.|++.-++..
T Consensus 364 NHvLPT~-----G~AR----~~sgLsV~~F~K~~s~~~ 392 (425)
T PRK00877 364 NHVLPTS-----GTAR----FSSGLSVYDFLKRSSVIE 392 (425)
T ss_pred CcccCCC-----ccee----ecCCccHHHhccceeEEE
Confidence 2335544 5566 667788899988776654
No 230
>PRK13770 histidinol dehydrogenase; Provisional
Probab=96.23 E-value=0.8 Score=49.84 Aligned_cols=280 Identities=13% Similarity=0.101 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC--CchHH--HHHHHHHHHhCCEEEEe--CC
Q 005131 362 KISSLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES--RPDAL--VQIAALAIRSGNGLLLK--GG 435 (713)
Q Consensus 362 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~--~P~~~--~~~~~~ALaaGN~vv~K--ps 435 (713)
-++.+.+.++.|.....+.. + ....|.....+..|+--|++..|- .|+.. ...+.||-.||+.=|+- |.
T Consensus 76 ai~~A~~nI~~fh~~q~~~~-~----~~~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 150 (416)
T PRK13770 76 ALQQSYERIKAYQESIKQTN-Q----QLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPP 150 (416)
T ss_pred HHHHHHHHHHHHHHHhCCCC-e----EecCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCc
Confidence 45566666776655222211 1 112456667799999999999997 46543 47788999999876654 44
Q ss_pred CCchHHHHHHHHHHHHhccccCCCCeEEEec-CCchhHHhh----hcCCCccEEEecCCHHHHHHHHHhc---CCCeEEe
Q 005131 436 KEAKRSNAILHKIITEVIPENVGERLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNRLVSQIKEST---KIPVLGH 507 (713)
Q Consensus 436 ~~~~~~~~~l~~~~~~al~~glP~g~v~vv~-g~~~~~~~l----~~~~~v~~v~fTGs~~~g~~i~~~~---~~~v~lE 507 (713)
.........|+ ..+.+ | +=.+.. |+...-.+| .+-|.||+|+=-|..=+..+=..-. ++-.. .
T Consensus 151 ~~~~i~p~iL~-Aa~~~---G----v~eIy~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~~-A 221 (416)
T PRK13770 151 QPNGVSQEVLA-ACYIT---Q----VNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQI-A 221 (416)
T ss_pred CCCCCCHHHHH-HHHHc---C----CCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCCcCcCCC-C
Confidence 32111222222 22344 4 333333 653322233 3458999999888865433222211 12211 1
Q ss_pred cCccceEEEcCCCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccCCCCC
Q 005131 508 ADGICHIYVDKSADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLNIPEP 586 (713)
Q Consensus 508 lgG~~p~iV~~dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~v~~~ 586 (713)
...--.+|-+++||.+.. .+.+..+= + |- .+ +-++|..+ .++.+++.++...+=..+ +..
T Consensus 222 GPSEvlViAD~~Anp~~iAaDLLaQAE-H-d~--~a-~~iLvT~s--~~la~~V~~ev~~ql~~l------------pr~ 282 (416)
T PRK13770 222 GPTEIALIIDETADLDAIVYDVFAQAE-H-DE--LA-RTYVISED--AQVLKDLESRIAKALPNV------------DRY 282 (416)
T ss_pred CCceeEEEecCCCCHHHHHHHHHHHhc-c-CC--CC-cEEEEeCC--HHHHHHHHHHHHHHHHhC------------ChH
Confidence 111122455567999998 55554431 1 11 11 23455443 344454443332211111 000
Q ss_pred CCccc--cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhccC-eeeEEEcCCCCC---------CC
Q 005131 587 NSFHH--EYNSMACTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQVD-SAAVFHNASTRF---------CD 654 (713)
Q Consensus 587 ~~~~e--E~FgPvl~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~-~G~v~iN~~~~~---------~~ 654 (713)
.+.++ +-|| .++-++|+|||++++|..-.= ..-|.++|. ..+..+++ +|.|++..++.. +.
T Consensus 283 ~i~~~al~~~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNH 355 (416)
T PRK13770 283 DIVSKSIANQH---YLIHASNFDEACHVMNTIAPE-HASIQTVNP---QPYIEKVKYVGALFIGHYSPEVIGDYVAGPSH 355 (416)
T ss_pred HHHHHHHHhCC---EEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhCCEeceeccCCCCchhhhccccCCCC
Confidence 11111 2233 346789999999999987533 456888886 45666664 899999766431 23
Q ss_pred CCCccCccceeeccccCCCcccchHhhceeEEEEEE
Q 005131 655 GARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 655 ~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 690 (713)
-+|-| |..| ..|.-+.+.|++.-++..
T Consensus 356 vLPT~-----G~AR----~~sgLsv~~FlK~~s~~~ 382 (416)
T PRK13770 356 VLPTN-----RTAR----FTNGLSVNDFLTRNTVIH 382 (416)
T ss_pred cCCCC-----ccee----ccCCCcHHHeecceeeEE
Confidence 35554 5566 567778888988776653
No 231
>PRK13769 histidinol dehydrogenase; Provisional
Probab=96.23 E-value=2.2 Score=45.80 Aligned_cols=272 Identities=13% Similarity=0.079 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHHhcccCccccccccccccCCceeeeeeccceeEEEEecC-CchHHHHHHHHHHHhCCEEEEeCCCCchH
Q 005131 362 KISSLANSVRVLANMEDPIGHILKKTQLADGLFLEKTSCPLGVLLIVFES-RPDALVQIAALAIRSGNGLLLKGGKEAKR 440 (713)
Q Consensus 362 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-~P~~~~~~~~~ALaaGN~vv~Kps~~~~~ 440 (713)
-++.+.+.++.|.....+..... . .+|.....++.|+--|++..|. ||......+.||-.||+.=|+--+|-...
T Consensus 58 ai~~a~~~I~~fh~~q~~~~~~~--~--~~Gv~~g~~~~Pi~rvG~YVPa~~pStvLM~~iPAkvAGV~~Iv~~TPp~~i 133 (368)
T PRK13769 58 AALEAAKSLEALYSRLKPPEAVD--F--YGGVLRSVFWKPVRRAALYVPARYVSTLVMLAVPARAAGVEEIYVVTPPRGV 133 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEe--c--CCCeEEEEEEeeeeeeEEEeccchHHHHHHhhccHhhcCCCeEEEeCCCCCC
Confidence 44555666776654222221111 1 2566777899999999999998 77666677789999998766553332112
Q ss_pred HHHHHHHHHHHhccccCCCCeEEEec-CCchhHHhhhcCCCccEEEecCCHHHHHHHHHhcC-CCeEEecCccceEEEcC
Q 005131 441 SNAILHKIITEVIPENVGERLIGLVT-SREEIPDLLKLDDVIDLVIPRGSNRLVSQIKESTK-IPVLGHADGICHIYVDK 518 (713)
Q Consensus 441 ~~~~l~~~~~~al~~glP~g~v~vv~-g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~~~-~~v~lElgG~~p~iV~~ 518 (713)
....|+ ..+.+ | +=.+.. |+...-.++.---+||+|+=-|..=+..+=..-.+ .-+=+-.|=..-+|+-+
T Consensus 134 ~p~vL~-aa~~~---G----v~eIy~vGGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~V~ID~~AGPSEvlViAD 205 (368)
T PRK13769 134 TGELLA-VAKEL---G----VKGVLAIGGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQYVGIDGIEGPTELVVYAE 205 (368)
T ss_pred CHHHHH-HHHHc---C----CCeeecccCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCCcCCCCcCCCcceEEEcC
Confidence 222222 23344 4 333444 65332234443348999999988764332222111 11111223334466666
Q ss_pred CCCHHHH-HHHHHHccCCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccCCCCCCCccccccCce
Q 005131 519 SADMDMA-KQIVLDAKVDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLNIPEPNSFHHEYNSMA 597 (713)
Q Consensus 519 dADl~~A-~~~~~~~~~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~v~~~~~~~eE~FgPv 597 (713)
+||.+.. .+.+..+= .|. .+ +-++|..+ .++.+++.++..++-+ + ..|-
T Consensus 206 ~a~p~~vAaDLLaQAE--H~~--~a-~~iLvT~s--~~la~~V~~~v~~~~~---------------------~-~~~~- 255 (368)
T PRK13769 206 GVPPEVAVRGALAQLE--HGP--TS-FAYLLSTD--AELLKAAEEIYRRERT---------------------S-SMGP- 255 (368)
T ss_pred CCCHHHHHHHHHHHhh--cCC--CC-cEEEEECC--HHHHHHHHHHHHHHHH---------------------h-cCCC-
Confidence 7998887 45544331 121 12 33555544 4566665544433200 0 0121
Q ss_pred EEEEEeCCHHHHHHHHHccCCCceeEEEcCCHHHHHHHHhcc-CeeeEEEcCCCCC-------CCCCCccCccceeeccc
Q 005131 598 CTIEIVDDVHAAIGHIHQHGSGHTDCIITNDSEAAEIFLRQV-DSAAVFHNASTRF-------CDGARFGLGAEVGISTS 669 (713)
Q Consensus 598 l~v~~~~~~~eAi~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~~-------~~~~pfGG~k~SG~g~~ 669 (713)
..|+-++|++||++++|..--= ...|.+.+ .+..++ .+|.|+++.+... +.-+|-| |..|
T Consensus 256 ~~iivv~~leeai~~~N~~APE-HLel~~~~-----~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLPT~-----G~AR- 323 (368)
T PRK13769 256 LEVRKVAGVEEAVRFIDEIAPE-HLEVWGRR-----EVAYRVRNVGAVSVNMPSPYLDYVAGISHVLPTG-----GTAR- 323 (368)
T ss_pred CeEEEECCHHHHHHHHHhhChH-heEeeCcH-----HHHhhCCccCChhcCCchhhhccccCCCCcCCCC-----ccee-
Confidence 3467899999999999986422 34445522 244455 5899999654211 2335554 4555
Q ss_pred cCCCcccchHhhceeEEEEEE
Q 005131 670 RIHARGPVGVEGLLTTRWILK 690 (713)
Q Consensus 670 ~~~~~g~~~l~~~~~~k~v~~ 690 (713)
..|.-+...|++.-++..
T Consensus 324 ---~~sgLsv~~FlK~~t~~~ 341 (368)
T PRK13769 324 ---WRGIITPLTFMKPIGVAE 341 (368)
T ss_pred ---ccCCCcHHHcccceeEEE
Confidence 556778888887666653
No 232
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=80.88 E-value=3 Score=52.60 Aligned_cols=93 Identities=15% Similarity=0.135 Sum_probs=62.3
Q ss_pred CCceeeeeeccceeEEEEecCCchHHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhccccCCCCeEEEecCCch
Q 005131 391 DGLFLEKTSCPLGVLLIVFESRPDALVQIAALAIRSGNGLLLKGGKEAKRSNAILHKIITEVIPENVGERLIGLVTSREE 470 (713)
Q Consensus 391 ~~~~~~~~~~P~GVv~~I~p~~P~~~~~~~~~ALaaGN~vv~Kps~~~~~~~~~l~~~~~~al~~glP~g~v~vv~g~~~ 470 (713)
.|..+.....|.|+|+++.+--. .....++.+|++||.+|+..++.. .. ++ + +||+.+.+.+.-.
T Consensus 1177 TGE~N~l~l~pRg~vLcl~~~~~-~~~~Ql~Aala~Gn~~v~~~~~~~---~~----~~--~---~Lp~~v~~~v~~~-- 1241 (1318)
T PRK11809 1177 TGERNTYTLLPRERVLCLADTEQ-DALTQLAAVLAVGSQALWPDDALH---RA----LV--A---ALPAAVQARIQLA-- 1241 (1318)
T ss_pred CCCcceeeccCCCcEEEeCCCHH-HHHHHHHHHHHhCCEEEEeCCchh---HH----HH--H---hccHHHHhHhhhc--
Confidence 46667778899999999988522 234667779999999998755431 11 11 2 4666677766421
Q ss_pred hHHhhhcCCCccEEEecCCHHHHHHHHHh
Q 005131 471 IPDLLKLDDVIDLVIPRGSNRLVSQIKES 499 (713)
Q Consensus 471 ~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 499 (713)
.........++.|.|-|.....+.+.++
T Consensus 1242 -~~~~~~~~~~~avl~~G~~~~l~~~~~~ 1269 (1318)
T PRK11809 1242 -KDWQLADQPFDAVLFHGDSDQLRALCEQ 1269 (1318)
T ss_pred -cccccccCCccEEEEeCCHHHHHHHHHH
Confidence 1112223569999999999977777654
No 233
>KOG2697 consensus Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=68.53 E-value=1.5e+02 Score=30.91 Aligned_cols=232 Identities=13% Similarity=0.130 Sum_probs=121.9
Q ss_pred CCceeeeeeccceeEEEEecC-C---chHHHHHHHHHHHhCCEEEEeCCC--CchHHHHHHHHHHHHhccccCCCCeEEE
Q 005131 391 DGLFLEKTSCPLGVLLIVFES-R---PDALVQIAALAIRSGNGLLLKGGK--EAKRSNAILHKIITEVIPENVGERLIGL 464 (713)
Q Consensus 391 ~~~~~~~~~~P~GVv~~I~p~-~---P~~~~~~~~~ALaaGN~vv~Kps~--~~~~~~~~l~~~~~~al~~glP~g~v~v 464 (713)
.|.......+|+|-|+...|- . |.--.....||=.+||.-|+-.+| .--..+-.+.=+..++ | +-.+
T Consensus 116 ~GV~C~R~sRpI~~VGLYiPGGTAvLPSTALMLgvPAqvAgCk~vV~atPprKDG~v~pEvvY~A~k~---G----a~~I 188 (446)
T KOG2697|consen 116 KGVRCKRVSRPIGSVGLYIPGGTAVLPSTALMLGVPAQVAGCKTVVLATPPRKDGSVCPEVVYCAKKA---G----ATHI 188 (446)
T ss_pred CceeeeecCccccceeEEccCCceeccchHhhhcCcHhhcCCceEEEecCCCcCCccCcceeeehhhc---C----hhhe
Confidence 466777788999999999997 4 332224455888899976654322 1111111111122233 3 3344
Q ss_pred ec-CCchhHHhh----hcCCCccEEEecCCHHH--HHHHHHhc-CCCeEEec-Cccce--EEEcCCCCHHHHHHHHHHcc
Q 005131 465 VT-SREEIPDLL----KLDDVIDLVIPRGSNRL--VSQIKEST-KIPVLGHA-DGICH--IYVDKSADMDMAKQIVLDAK 533 (713)
Q Consensus 465 v~-g~~~~~~~l----~~~~~v~~v~fTGs~~~--g~~i~~~~-~~~v~lEl-gG~~p--~iV~~dADl~~A~~~~~~~~ 533 (713)
+- |+...-.+| ..-|+|++|+=-|..-+ ++.+.+.- ..-|...+ .|.+- +|-+++||++..+.-+.+-.
T Consensus 189 ~lAGGAQAiAAMAyGt~~~PKV~KIfGPGNQfVTAAKM~vQNd~~AlvsIDmPAGPSEVLVIADE~a~p~~vA~DLLSQA 268 (446)
T KOG2697|consen 189 LLAGGAQAIAAMAYGTDSCPKVEKIFGPGNQFVTAAKMIVQNDYEALVSIDMPAGPSEVLVIADEHASPVYVAADLLSQA 268 (446)
T ss_pred eccccHHHHHHHHhccccCcchhhhcCCchhhhhhhhhheeccccceEEeccCCCCceEEEEecCCCChHHHHHHHHhHh
Confidence 44 553322333 35689999987776442 33333321 23333333 23332 56677899988743333222
Q ss_pred CCCCCccccCceEEEcCCCchhHHHHHHHHHHhCCCEEEcCCccccccCCCCCCCccccccCceEEEEEeCCHHHHHHHH
Q 005131 534 VDYPAACNAMETLLIHQDLVPTGFNELIDNLRSEGVTLYGGPRASSLLNIPEPNSFHHEYNSMACTIEIVDDVHAAIGHI 613 (713)
Q Consensus 534 ~~~GQ~C~a~~rv~V~~~i~d~fi~~l~~~~~~~Ga~l~gg~~~~~~~~v~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~ 613 (713)
-+ | .-.+.++|.-+.-.+.++++.++.-++--.+--+ . +.+.-+- --.++-.++.+||+++-
T Consensus 269 EH-G---~DSQviLv~V~lS~~~~~~Iq~ai~~qal~LpR~----~--------i~~kai~--hS~iV~~d~~~eA~e~S 330 (446)
T KOG2697|consen 269 EH-G---PDSQVILVVVGLSVDMLNAIQEAIAKQALSLPRG----E--------IASKAIS--HSFIVFADDMIEAIEFS 330 (446)
T ss_pred hc-C---CCceEEEEEecCCHHHHHHHHHHHHHHHhcCcHH----H--------HHHHHhh--hceEEEecCHHHHHhhh
Confidence 11 2 1225577776777666665443332222222101 0 1111111 12355679999999999
Q ss_pred HccCCCceeEEEcCCHHHHHHHHhcc-CeeeEEEcCCCC
Q 005131 614 HQHGSGHTDCIITNDSEAAEIFLRQV-DSAAVFHNASTR 651 (713)
Q Consensus 614 N~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~ 651 (713)
|....- ..-+.-.| |......+ .+|.|+|-.|+.
T Consensus 331 NlYaPE-HLil~vkn---A~~y~~lidNAGSVFvGpwtP 365 (446)
T KOG2697|consen 331 NLYAPE-HLILNVKN---AEKYEGLIDNAGSVFVGPWTP 365 (446)
T ss_pred hccCch-hheeeccc---hhhhhhhhccCCceeecCCCc
Confidence 986543 23333344 44444444 489999998853
No 234
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=65.40 E-value=28 Score=32.83 Aligned_cols=57 Identities=26% Similarity=0.311 Sum_probs=36.3
Q ss_pred EEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHH
Q 005131 190 ILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENIL 265 (713)
Q Consensus 190 i~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~ 265 (713)
++++||||++|+ ++++=.=+-+|.+. | ....|+- +...++.|+++-|..|++...+.
T Consensus 10 Lli~DVDGvLTD------G~ly~~~~Gee~Ka---F-----nv~DG~G-----ik~l~~~Gi~vAIITGr~s~ive 66 (170)
T COG1778 10 LLILDVDGVLTD------GKLYYDENGEEIKA---F-----NVRDGHG-----IKLLLKSGIKVAIITGRDSPIVE 66 (170)
T ss_pred EEEEeccceeec------CeEEEcCCCceeee---e-----eccCcHH-----HHHHHHcCCeEEEEeCCCCHHHH
Confidence 567899999997 54443333333332 2 2234443 34567789999999998887665
No 235
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane. It consists of 11 subunits, ~100 chlorophyll a molecules, 2 phylloquinones, and 3 Fe4S4-clusters. The three dimensional structure of the PSI complex has been resolved at 2.5 A [], which allows the precise localisation of each cofactor. PSI together with photosystem II (PSII) catalyses the light-induced steps in oxygenic photosynthesis - a process found in cyanobacteria, eukaryotic algae (e.g. red algae, green algae) and higher plants. To date, three thylakoid proteins involved in the stable accumulation of PSI have been identified: BtpA [], Ycf3 [, ], and Ycf4 (IPR003359 from INTERPRO) []. Because translation of the psaA and psaB mRNAs encoding the two reaction centre polypeptides, of PSI and PSII respectively, is not affected in mutant strains lacking functional ycf3 and ycf4, the products of these two genes appear to act at a post-translational step of PSI biosynthesis. These gene products are therefore involved either in the stabilisation or in the assembly of the PSI complex. However, their exact roles remain unknown. The BtpA protein appears to act at the level of PSI stabilisation []. It is an extrinsic membrane protein located on the cytoplasmic side of the thylakoid membrane [, ]. Homologs of BtpA are found in the crenarchaeota and euryarchaeota, where their function remains unknown. The Ycf4 protein is firmly associated with the thylakoid membrane, presumably through a transmembrane domain []. Ycf4 co-fractionates with a protein complex larger than PSI upon sucrose density gradient centrifugation of solubilised thylakoids []. The Ycf3 protein is loosely associated with the thylakoid membrane and can be released from the membrane with sodium carbonate. This suggests that Ycf3 is not part of a stable complex and that it probably interacts transiently with its partners []. Ycf3 contains a number of tetratrico peptide repeats (TPR, IPR001440 from INTERPRO); TPR is a structural motif present in a wide range of proteins, which mediates protein-protein interactions.
Probab=61.18 E-value=20 Score=36.86 Aligned_cols=108 Identities=28% Similarity=0.388 Sum_probs=67.6
Q ss_pred hhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhh--hcCCCCccccCch------HHHHHHHHHHHHcCCcE
Q 005131 182 LELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEI--TFGDKSRVGRGGM------TAKVKAAVNAAYAGIPV 253 (713)
Q Consensus 182 ~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~--~~~~~~~~~~g~m------~~Kl~aa~~a~~~gv~v 253 (713)
++|+++ +-+++||.-=... | +..-+.+|..+.. .+....-.++|.. ..+++.++.+.. +||
T Consensus 135 ~~l~a~-v~ilaDV~~kh~~-~-------l~~~~~~~~~~~a~~~~~aDaviVtG~~TG~~~~~~~l~~vr~~~~--~PV 203 (254)
T PF03437_consen 135 KRLGAD-VKILADVHVKHSS-P-------LATRDLEEAAKDAVERGGADAVIVTGKATGEPPDPEKLKRVREAVP--VPV 203 (254)
T ss_pred HHcCCC-eEEEeeechhhcc-c-------CCCCCHHHHHHHHHHhcCCCEEEECCcccCCCCCHHHHHHHHhcCC--CCE
Confidence 578999 9999998765533 2 1121222222111 1222222333332 334445554444 899
Q ss_pred EEEeCCCchhHHHHh---cCCcceeEEecCCCCCCCCCHHHHHHHHHHHH
Q 005131 254 VITSGYSDENILKVL---QGERIGTLFHQDAHILDPFNEVGAREMAVAAR 300 (713)
Q Consensus 254 ~I~~g~~~~~l~~~~---tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~ 300 (713)
.|-+|-.++++.+.+ .|=.+||.+..+...|-+.+++.+++.++.++
T Consensus 204 lvGSGvt~~Ni~~~l~~ADG~IVGS~~K~~G~~~n~VD~~Rv~~fm~~v~ 253 (254)
T PF03437_consen 204 LVGSGVTPENIAEYLSYADGAIVGSYFKKDGKWENPVDPERVRRFMEAVK 253 (254)
T ss_pred EEecCCCHHHHHHHHHhCCEEEEeeeeeeCCEeCCcCCHHHHHHHHHHhh
Confidence 999999999997664 57788999887655666788888888887765
No 236
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=48.73 E-value=29 Score=31.59 Aligned_cols=48 Identities=21% Similarity=0.508 Sum_probs=32.6
Q ss_pred cceEEEEeCccceecCCCccc-HHHHHHHHHHHHHHHHCCCeEEEEecCh
Q 005131 11 VKRIVVKVGTAVVTRSDGRLA-LGRLGALCEQIKELNSQGYEVILVSSGA 59 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~-~~~~~~~~~~i~~~~~~g~~vviV~ggg 59 (713)
||.+++=+.|+++.+..+... ........+.|+.+.+.|++++++ +|.
T Consensus 1 ~K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~Iiia-TGR 49 (126)
T TIGR01689 1 MKRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVIS-SSR 49 (126)
T ss_pred CCEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEE-CCC
Confidence 578999999999875432111 112346677788888899998777 554
No 237
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=46.00 E-value=63 Score=31.02 Aligned_cols=64 Identities=16% Similarity=0.256 Sum_probs=37.8
Q ss_pred EEeecCCccccCCC--CCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCCCchhHHHH
Q 005131 190 ILLSDVEGLYSGPP--SDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVVITSGYSDENILKV 267 (713)
Q Consensus 190 i~~TdV~GV~~~dP--~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~ 267 (713)
.+++|+|||+|+.- .++++.-.+.++ ...+| ++..+.+.|+++.|+++.....+...
T Consensus 9 ~~v~d~dGv~tdg~~~~~~~g~~~~~~~----------------~~D~~-----~~~~L~~~Gi~laIiT~k~~~~~~~~ 67 (169)
T TIGR02726 9 LVILDVDGVMTDGRIVINDEGIESRNFD----------------IKDGM-----GVIVLQLCGIDVAIITSKKSGAVRHR 67 (169)
T ss_pred EEEEeCceeeECCeEEEcCCCcEEEEEe----------------cchHH-----HHHHHHHCCCEEEEEECCCcHHHHHH
Confidence 57899999999842 122333233222 12333 44456678999889988777766555
Q ss_pred hcCCcce
Q 005131 268 LQGERIG 274 (713)
Q Consensus 268 ~tge~iG 274 (713)
+..-.+.
T Consensus 68 l~~lgi~ 74 (169)
T TIGR02726 68 AEELKIK 74 (169)
T ss_pred HHHCCCc
Confidence 5543333
No 238
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=44.36 E-value=1.8e+02 Score=27.81 Aligned_cols=112 Identities=8% Similarity=0.110 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccc----cccCccccchHHHHHHcchH-HHHHHHHHH
Q 005131 33 GRLGALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFA----DLQKPQIELDGKACAAVGQN-SIMALYDTL 107 (713)
Q Consensus 33 ~~~~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~g~~-~~~~l~~~~ 107 (713)
+.+.+.+..|......|.+ ||+.|.|++.-+-+--.....+ .|. .++.-....+.....+++.- +.+.++...
T Consensus 25 ~~I~~aa~~i~~~l~~G~K-vl~cGNGgSaadAqHfaael~g-Rf~~eR~~lpaIaLt~dsS~lTai~NDy~yd~vFsRq 102 (176)
T COG0279 25 EAIERAAQLLVQSLLNGNK-VLACGNGGSAADAQHFAAELTG-RFEKERPSLPAIALSTDSSVLTAIANDYGYDEVFSRQ 102 (176)
T ss_pred HHHHHHHHHHHHHHHcCCE-EEEECCCcchhhHHHHHHHHhh-HHHhcCCCCCeeEeecccHHHhhhhccccHHHHHHHH
Confidence 4577788888777788888 5556887776543211111111 111 12222222333444444433 666777777
Q ss_pred hhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEE
Q 005131 108 FSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVF 150 (713)
Q Consensus 108 l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~ 150 (713)
++..|.+ +.+++.-.. .|-..++...++...+.|...|.
T Consensus 103 veA~g~~-GDvLigIST---SGNS~nVl~Ai~~Ak~~gm~vI~ 141 (176)
T COG0279 103 VEALGQP-GDVLIGIST---SGNSKNVLKAIEAAKEKGMTVIA 141 (176)
T ss_pred HHhcCCC-CCEEEEEeC---CCCCHHHHHHHHHHHHcCCEEEE
Confidence 8888765 344442222 33345666889999999988885
No 239
>PTZ00174 phosphomannomutase; Provisional
Probab=41.14 E-value=46 Score=33.95 Aligned_cols=43 Identities=12% Similarity=0.318 Sum_probs=33.3
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecC
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSG 58 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~gg 58 (713)
+|.++.=+-|++|.++. .++. ...+.|+.++++|.+++|.+|-
T Consensus 5 ~klia~DlDGTLL~~~~-~is~----~~~~ai~~l~~~Gi~~viaTGR 47 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN-PITQ----EMKDTLAKLKSKGFKIGVVGGS 47 (247)
T ss_pred CeEEEEECcCCCcCCCC-CCCH----HHHHHHHHHHHCCCEEEEEcCC
Confidence 67788899999997754 4553 3567788888999999888553
No 240
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only]
Probab=40.64 E-value=65 Score=32.56 Aligned_cols=64 Identities=30% Similarity=0.390 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCchhHH---HHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHH
Q 005131 237 TAKVKAAVNAAYAGIPVVITSGYSDENIL---KVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARES 302 (713)
Q Consensus 237 ~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~---~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a 302 (713)
...|+.+..+.. +||.+-||-+++++. .+..|=.+||.+..+...|-+.+.+.+.+.++.|++-
T Consensus 194 ~~el~~a~~~~~--~pvlvGSGv~~eN~~~~l~~adG~IvgT~lK~~G~~~n~VD~~Rv~~~v~~a~~~ 260 (263)
T COG0434 194 LEELKLAKEAVD--TPVLVGSGVNPENIEELLKIADGVIVGTSLKKGGVTWNPVDLERVRRFVEAARRL 260 (263)
T ss_pred HHHHHHHHhccC--CCEEEecCCCHHHHHHHHHHcCceEEEEEEccCCEecCccCHHHHHHHHHHHHHh
Confidence 444455555544 999999999998885 4455888899998887788888888888888888754
No 241
>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=40.27 E-value=3.4e+02 Score=26.03 Aligned_cols=102 Identities=19% Similarity=0.161 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHCCCeEEEEecChhhhchHHHhhhhccCcccccccCccccchHHHHHHcchHHHHHHHHHHhhhcCCcc
Q 005131 36 GALCEQIKELNSQGYEVILVSSGAVGLGRQRLRYRRLINSSFADLQKPQIELDGKACAAVGQNSIMALYDTLFSELDLTS 115 (713)
Q Consensus 36 ~~~~~~i~~~~~~g~~vviV~ggg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~l~~~~l~~~gi~~ 115 (713)
+.+.++|..++..|.+.|++ . +++.-+..++. .. +.+..++.|+..
T Consensus 58 RdL~~DL~~Lk~~G~~~Vvt---l--~~~~EL~~l~V----------p~-------------------L~~~~~~~Gi~~ 103 (168)
T PF05706_consen 58 RDLQADLERLKDWGAQDVVT---L--LTDHELARLGV----------PD-------------------LGEAAQARGIAW 103 (168)
T ss_dssp B-HHHHHHHHHHTT--EEEE------S-HHHHHHTT-----------TT-------------------HHHHHHHTT-EE
T ss_pred chHHHHHHHHHHCCCCEEEE---e--CcHHHHHHcCC----------cc-------------------HHHHHHHcCCEE
Confidence 46788888898999987766 2 33322222211 11 234467788766
Q ss_pred ceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcccchhHHHHHHHhhhC
Q 005131 116 AQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIFWDNDSLAALLALELK 185 (713)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~~~sD~~A~~lA~~l~ 185 (713)
..+.+.+...-+......+.+.|...|++|.-+++|. - +| ++.+=++|+.+=-.|+
T Consensus 104 ~h~PI~D~~aPd~~~~~~i~~eL~~~L~~g~~V~vHC-----~--------GG-lGRtGlvAAcLLl~L~ 159 (168)
T PF05706_consen 104 HHLPIPDGSAPDFAAAWQILEELAARLENGRKVLVHC-----R--------GG-LGRTGLVAACLLLELG 159 (168)
T ss_dssp EE----TTS---HHHHHHHHHHHHHHHHTT--EEEE------S--------SS-SSHHHHHHHHHHHHH-
T ss_pred EecCccCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEC-----C--------CC-CCHHHHHHHHHHHHHc
Confidence 6666655433332223344577888899999999997 2 12 3455666666655554
No 242
>PF13376 OmdA: Bacteriocin-protection, YdeI or OmpD-Associated
Probab=38.98 E-value=44 Score=26.22 Aligned_cols=35 Identities=11% Similarity=0.104 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 005131 289 EVGAREMAVAARESSRRLQAMSSEDRKKILLDIAD 323 (713)
Q Consensus 289 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~ 323 (713)
++|+..+++.-..|...|..+++..|..++..+..
T Consensus 7 P~dl~~aL~~~p~a~~~f~~l~~~~rr~~i~wi~~ 41 (63)
T PF13376_consen 7 PEDLEAALEANPEAKEFFESLTPSYRREYIRWINS 41 (63)
T ss_pred CHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 56899999999999999999999999999987753
No 243
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=36.60 E-value=53 Score=26.60 Aligned_cols=44 Identities=20% Similarity=0.276 Sum_probs=28.6
Q ss_pred eEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecCh-hhhchH
Q 005131 13 RIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGA-VGLGRQ 65 (713)
Q Consensus 13 ~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg-~~i~~~ 65 (713)
+.|+=-||-..+|. +.+.+.|..+.+.-..++|||||. .++...
T Consensus 4 ~rVli~GgR~~~D~---------~~i~~~Ld~~~~~~~~~~lvhGga~~GaD~i 48 (71)
T PF10686_consen 4 MRVLITGGRDWTDH---------ELIWAALDKVHARHPDMVLVHGGAPKGADRI 48 (71)
T ss_pred CEEEEEECCccccH---------HHHHHHHHHHHHhCCCEEEEECCCCCCHHHH
Confidence 34555677777663 355666655555545788999998 666654
No 244
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=36.21 E-value=57 Score=33.53 Aligned_cols=45 Identities=16% Similarity=0.318 Sum_probs=34.0
Q ss_pred ccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecCh
Q 005131 10 DVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGA 59 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg 59 (713)
++|.++.-+-|+++.+.. .++. +..+.|++++++|++++|.+|=.
T Consensus 2 ~~kli~~DlDGTLl~~~~-~i~~----~~~~ai~~l~~~G~~~~iaTGR~ 46 (270)
T PRK10513 2 AIKLIAIDMDGTLLLPDH-TISP----AVKQAIAAARAKGVNVVLTTGRP 46 (270)
T ss_pred ceEEEEEecCCcCcCCCC-ccCH----HHHHHHHHHHHCCCEEEEecCCC
Confidence 467889999999997643 4543 45677888889999988885543
No 245
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=35.31 E-value=63 Score=32.19 Aligned_cols=45 Identities=22% Similarity=0.410 Sum_probs=33.3
Q ss_pred ccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecCh
Q 005131 10 DVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGA 59 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg 59 (713)
|+|.++.=+.|+++.+.. .++ ....+.|+.+++.|.+++|++|=.
T Consensus 2 ~~kli~~DlDGTLl~~~~-~i~----~~~~~al~~l~~~G~~~~iaTGR~ 46 (230)
T PRK01158 2 KIKAIAIDIDGTITDKDR-RLS----LKAVEAIRKAEKLGIPVILATGNV 46 (230)
T ss_pred ceeEEEEecCCCcCCCCC-ccC----HHHHHHHHHHHHCCCEEEEEcCCc
Confidence 457888899999997644 344 356677888889999988885543
No 246
>PF07045 DUF1330: Protein of unknown function (DUF1330); InterPro: IPR010753 This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown.; PDB: 2FIU_B 3HHL_A 3DCA_D 3LO3_I.
Probab=34.71 E-value=47 Score=26.18 Aligned_cols=56 Identities=13% Similarity=0.061 Sum_probs=36.4
Q ss_pred chhHHHHHHHHHHhCCCEE-E-cCCccccccCCCCCCCccccccCceEEEEEeCCHHHHHHHHHccCC
Q 005131 553 VPTGFNELIDNLRSEGVTL-Y-GGPRASSLLNIPEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGS 618 (713)
Q Consensus 553 ~d~fi~~l~~~~~~~Ga~l-~-gg~~~~~~~~v~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~ 618 (713)
++++.+.+...+.+.|+++ . |+... .+.-+.-...+.|+.|+|.+.|.++.|+..|
T Consensus 4 ~~~Y~~~~~~~l~~~GG~~l~~~~~~~----------~leG~~~~~~~viieFPs~~aa~~~~~speY 61 (65)
T PF07045_consen 4 YQEYREAVPPILEKYGGRVLARGGEPE----------VLEGDWDPDRVVIIEFPSMEAAKAWYNSPEY 61 (65)
T ss_dssp HHHHHHHHHHHHHHTT-EEEEECEEEE----------EEEST-SSSEEEEEEESSHHHHHHHHCSHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCcee----------EEecCCCCCeEEEEECCCHHHHHHHHCCHhH
Confidence 4556666666777788887 3 33211 1111223478899999999999999988655
No 247
>PF06945 DUF1289: Protein of unknown function (DUF1289); InterPro: IPR010710 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N terminus. The function of this family is unknown.
Probab=34.10 E-value=49 Score=24.88 Aligned_cols=22 Identities=27% Similarity=0.475 Sum_probs=18.8
Q ss_pred HHHhcCCHHHHHHHHHHHHHHH
Q 005131 304 RRLQAMSSEDRKKILLDIADAL 325 (713)
Q Consensus 304 ~~w~~~~~~~R~~~L~~~a~~l 325 (713)
..|..++.++|.+++.++....
T Consensus 28 ~~W~~~s~~er~~i~~~l~~R~ 49 (51)
T PF06945_consen 28 RDWKSMSDDERRAILARLRARR 49 (51)
T ss_pred HHHhhCCHHHHHHHHHHHHHHh
Confidence 3699999999999999887654
No 248
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=33.11 E-value=70 Score=32.96 Aligned_cols=44 Identities=5% Similarity=0.103 Sum_probs=33.5
Q ss_pred ccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecC
Q 005131 10 DVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSG 58 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~gg 58 (713)
|+|.++.=+.|++|.+.. .++. +..+.|+.+++.|.++++.+|=
T Consensus 1 m~kli~~DlDGTLl~~~~-~i~~----~~~~ai~~l~~~G~~~~iaTGR 44 (272)
T PRK15126 1 MARLAAFDMDGTLLMPDH-HLGE----KTLSTLARLRERDITLTFATGR 44 (272)
T ss_pred CccEEEEeCCCcCcCCCC-cCCH----HHHHHHHHHHHCCCEEEEECCC
Confidence 468899999999997543 4553 4567788888999998888443
No 249
>PRK10976 putative hydrolase; Provisional
Probab=31.56 E-value=77 Score=32.48 Aligned_cols=44 Identities=11% Similarity=0.209 Sum_probs=33.7
Q ss_pred ccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecC
Q 005131 10 DVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSG 58 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~gg 58 (713)
|+|.++.=+-|+++.+.. .++. +..+.|+.+++.|++++|.+|=
T Consensus 1 mikli~~DlDGTLl~~~~-~is~----~~~~ai~~l~~~G~~~~iaTGR 44 (266)
T PRK10976 1 MYQVVASDLDGTLLSPDH-TLSP----YAKETLKLLTARGIHFVFATGR 44 (266)
T ss_pred CceEEEEeCCCCCcCCCC-cCCH----HHHHHHHHHHHCCCEEEEEcCC
Confidence 367889999999997643 4553 4567788888999999888544
No 250
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=31.16 E-value=83 Score=32.23 Aligned_cols=43 Identities=19% Similarity=0.351 Sum_probs=32.7
Q ss_pred ccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEec
Q 005131 10 DVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSS 57 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~g 57 (713)
++|.++.=+-|+++.++. .++. +..+.|+.++++|++++|.+|
T Consensus 2 ~~kli~~DlDGTLl~~~~-~i~~----~~~~ai~~~~~~G~~~~iaTG 44 (272)
T PRK10530 2 TYRVIALDLDGTLLTPKK-TILP----ESLEALARAREAGYKVIIVTG 44 (272)
T ss_pred CccEEEEeCCCceECCCC-ccCH----HHHHHHHHHHHCCCEEEEEcC
Confidence 367888999999997654 4554 356778888899999888843
No 251
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=30.91 E-value=1e+02 Score=32.50 Aligned_cols=50 Identities=18% Similarity=0.335 Sum_probs=37.7
Q ss_pred hccceEEEEeCccceecCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhh
Q 005131 9 KDVKRIVVKVGTAVVTRSDG-RLALGRLGALCEQIKELNSQGYEVILVSSGAVG 61 (713)
Q Consensus 9 ~~~~~iViKlGGs~l~~~~~-~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~ 61 (713)
..++.+|.=+.|++++++.. .++. ..+.+.|..+++.|.+++|++++...
T Consensus 124 ~~~kvIvFDLDgTLi~~~~~v~ird---PgV~EaL~~LkekGikLaIaTS~~Re 174 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEEPVRIRD---PRIYDSLTELKKRGCILVLWSYGDRD 174 (301)
T ss_pred ccceEEEEecCCCCcCCCCccccCC---HHHHHHHHHHHHCCCEEEEEECCCHH
Confidence 35778999999999998652 1221 35667788888999999999877654
No 252
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=30.63 E-value=1.3e+02 Score=23.25 Aligned_cols=36 Identities=17% Similarity=0.180 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHH
Q 005131 297 VAARESSRRLQAMSSEDRKKILLDIADALEANEELI 332 (713)
Q Consensus 297 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 332 (713)
+.++.....|..++.++|..+..+......++..++
T Consensus 30 ~i~~~~~~~W~~ls~~eK~~y~~~a~~~~~~y~~e~ 65 (66)
T cd01390 30 EVTKILGEKWKELSEEEKKKYEEKAEKDKERYEKEM 65 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 345556678999999999999988877766665553
No 253
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=29.75 E-value=2e+02 Score=29.70 Aligned_cols=67 Identities=15% Similarity=0.159 Sum_probs=47.0
Q ss_pred HHHHHHhhhcCCccceeeecccccCchhHHHHHHHHHHHHHhCCceeEEcCCCceecCCCcccCCCCcccchhHHHHHHH
Q 005131 102 ALYDTLFSELDLTSAQLLVTDNDFRDKEFRSQLSETVKSLLSLRVIPVFNENDAVSTRKAPYEDSSGIFWDNDSLAALLA 181 (713)
Q Consensus 102 ~l~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~vpV~~g~d~v~~~~~~~~~~~g~~~~sD~~A~~lA 181 (713)
+.+.+.|...|++........++ ..++.+.++.+.+.-.+.|++| |.+- +.. |.++-.+|
T Consensus 24 ~~la~~L~~~G~~v~~~~~VgD~------~~~I~~~l~~a~~r~D~vI~tG-------GLGP--T~D-----DiT~e~vA 83 (255)
T COG1058 24 AFLADELTELGVDLARITTVGDN------PDRIVEALREASERADVVITTG-------GLGP--THD-----DLTAEAVA 83 (255)
T ss_pred HHHHHHHHhcCceEEEEEecCCC------HHHHHHHHHHHHhCCCEEEECC-------CcCC--Ccc-----HhHHHHHH
Confidence 34677799999998865544433 2345578889999988888876 2221 122 89999999
Q ss_pred hhhCCCE
Q 005131 182 LELKADL 188 (713)
Q Consensus 182 ~~l~Ad~ 188 (713)
++|+-+.
T Consensus 84 ka~g~~l 90 (255)
T COG1058 84 KALGRPL 90 (255)
T ss_pred HHhCCCc
Confidence 9998764
No 254
>COG5470 Uncharacterized conserved protein [Function unknown]
Probab=28.79 E-value=1.1e+02 Score=26.19 Aligned_cols=56 Identities=11% Similarity=0.059 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHHhCCCEE--EcCCccccccCCCCCCCccccccCceEEEEEeCCHHHHHHHHHccCCC
Q 005131 554 PTGFNELIDNLRSEGVTL--YGGPRASSLLNIPEPNSFHHEYNSMACTIEIVDDVHAAIGHIHQHGSG 619 (713)
Q Consensus 554 d~fi~~l~~~~~~~Ga~l--~gg~~~~~~~~v~~~~~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~~g 619 (713)
.+.+.+........|++. .||+.. .+.-+.+---+.|+.|+|.+.|.++-|+..|-
T Consensus 19 ~~Y~~~~~~a~~~~Ggr~LvRGG~v~----------~lEG~w~ptr~vviEFps~~~ar~~y~SpeYq 76 (96)
T COG5470 19 KDYVSKAKPAIEKFGGRYLVRGGEVE----------TLEGEWRPTRNVVIEFPSLEAARDCYNSPEYQ 76 (96)
T ss_pred HHHHHHhHHHHHHhCCeeEeeCCCee----------eccCCCCcccEEEEEcCCHHHHHHHhcCHHHH
Confidence 344455455556678876 677542 11223331245688999999999998888775
No 255
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=27.34 E-value=1.2e+02 Score=32.03 Aligned_cols=48 Identities=21% Similarity=0.315 Sum_probs=36.0
Q ss_pred ccceEEEEeCccceecCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChh
Q 005131 10 DVKRIVVKVGTAVVTRSDG-RLALGRLGALCEQIKELNSQGYEVILVSSGAV 60 (713)
Q Consensus 10 ~~~~iViKlGGs~l~~~~~-~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~ 60 (713)
.++.+|.-+.|++++++.. .++. ..+.+.|..++++|.++.|+++|..
T Consensus 127 ~~~~i~~D~D~TL~~~~~~v~ird---p~V~EtL~eLkekGikLaIvTNg~R 175 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEEPVRIRD---PFVYDSLDELKERGCVLVLWSYGNR 175 (303)
T ss_pred eccEEEEecCCCccCCCCccccCC---hhHHHHHHHHHHCCCEEEEEcCCCh
Confidence 4678999999999998652 1221 3566777888899999999987743
No 256
>COG1623 Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only]
Probab=26.77 E-value=4.7e+02 Score=27.41 Aligned_cols=72 Identities=26% Similarity=0.223 Sum_probs=44.8
Q ss_pred CCCcccchhHHHHHHHhhhCCCEEEEeec-CCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHH
Q 005131 166 SSGIFWDNDSLAALLALELKADLLILLSD-VEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAV 244 (713)
Q Consensus 166 ~~g~~~~sD~~A~~lA~~l~Ad~li~~Td-V~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~ 244 (713)
+||=.+|.|+.|+.|=+..+-|--|+++| -.-|+-++ -++.|.=|+ . ....|++. |+|.
T Consensus 53 DGGF~ld~~fsa~~lyEL~KMDGAIILs~D~~kI~yAN-----vqL~PD~si-------p------T~EtGtRH--RTAE 112 (349)
T COG1623 53 DGGFSLDVDFSATRLYELAKMDGAIILSDDGSKILYAN-----VQLVPDPSI-------P------TDETGTRH--RTAE 112 (349)
T ss_pred cCcEEEeccCCHHHHHHHHhcCCcEEEcCccceeeeee-----eeecCCCCC-------C------CCCCcccc--chHH
Confidence 44433999999999998888887677766 34466553 333332111 1 12355666 6888
Q ss_pred HHHH-cCCcEEEEe
Q 005131 245 NAAY-AGIPVVITS 257 (713)
Q Consensus 245 ~a~~-~gv~v~I~~ 257 (713)
++++ .|.+|.-+|
T Consensus 113 R~AkqTG~~VIaiS 126 (349)
T COG1623 113 RVAKQTGNPVIAIS 126 (349)
T ss_pred HHHHHhCCeEEEEe
Confidence 7666 577766665
No 257
>PF09011 HMG_box_2: HMG-box domain; InterPro: IPR015101 This domain is predominantly found in Maelstrom homologue proteins. It has no known function. ; GO: 0005634 nucleus; PDB: 2EQZ_A 1V64_A 2CTO_A 1H5P_A 3TQ6_A 3FGH_A 3TMM_A 1J3X_A 2YRQ_A 1AAB_A ....
Probab=26.58 E-value=1.7e+02 Score=23.45 Aligned_cols=36 Identities=19% Similarity=0.222 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHH
Q 005131 297 VAARESSRRLQAMSSEDRKKILLDIADALEANEELI 332 (713)
Q Consensus 297 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 332 (713)
+..+.+...|..+|.++|..+-.+....=++...++
T Consensus 34 e~~k~~~~~Wk~Ls~~EK~~Y~~~A~~~k~~y~~e~ 69 (73)
T PF09011_consen 34 EVMKEISERWKSLSEEEKEPYEERAKEDKERYEREM 69 (73)
T ss_dssp HHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667788999999999999887765544444444
No 258
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=26.54 E-value=2.7e+02 Score=30.30 Aligned_cols=48 Identities=19% Similarity=0.064 Sum_probs=30.4
Q ss_pred cchhHH--HHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhh
Q 005131 171 WDNDSL--AALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEIT 224 (713)
Q Consensus 171 ~~sD~~--A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~ 224 (713)
++.|++ ++..|.++|||-+++=+-- ||..+..---..++++|++++++
T Consensus 299 G~r~~~~~~a~aAva~GAdg~~iE~H~------dp~~a~~D~~~sl~p~el~~l~~ 348 (360)
T PRK12595 299 GRRDLLLPTAKAALAIGADGVMAEVHP------DPAVALSDSAQQMDIPEFDRFLD 348 (360)
T ss_pred cchhhHHHHHHHHHHcCCCeEEEEecC------CCCCCCCchhhhCCHHHHHHHHH
Confidence 455777 7788999999977776664 55221111225566777776654
No 259
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=26.52 E-value=83 Score=32.56 Aligned_cols=46 Identities=13% Similarity=0.101 Sum_probs=33.8
Q ss_pred hccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecCh
Q 005131 9 KDVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGA 59 (713)
Q Consensus 9 ~~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg 59 (713)
+|.+.++.=+-|+++.+... + .....+.|..+++.|.+++|++|-.
T Consensus 2 ~~~kli~~DlDGTLl~~~~~-~----~~~~~~ai~~l~~~Gi~~~iaTgR~ 47 (273)
T PRK00192 2 MMKLLVFTDLDGTLLDHHTY-S----YEPAKPALKALKEKGIPVIPCTSKT 47 (273)
T ss_pred CcceEEEEcCcccCcCCCCc-C----cHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 35678899999999985431 2 2456677888889999999985543
No 260
>COG4430 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.00 E-value=1.3e+02 Score=29.27 Aligned_cols=111 Identities=20% Similarity=0.161 Sum_probs=67.6
Q ss_pred hHHHHHHHhhhCCCEEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHH-HHHHHHHHHHcCCc
Q 005131 174 DSLAALLALELKADLLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTA-KVKAAVNAAYAGIP 252 (713)
Q Consensus 174 D~~A~~lA~~l~Ad~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~-Kl~aa~~a~~~gv~ 252 (713)
|+.|-+. .+-.++.|.+|++... .|+.+.=++|+.....++.+. +.|+. -|..+..+...|..
T Consensus 64 d~~~l~f------~~~~ll~D~~~~L~~~--Tpr~q~srqirf~nv~El~e~--------~~mi~ayL~e~~~a~~aG~~ 127 (200)
T COG4430 64 DYCALLF------HKGALLLDEDGYLQQQ--TPRVQASRQIRFTNVQELSEE--------GRMIKAYLAEAIAAEKAGRW 127 (200)
T ss_pred HHHHHHH------hccccccCccchhhhc--CCCcccceeeehhhHHHHHHh--------HHHHHHHHHHHHHHHhcCCc
Confidence 7665544 3346788899999663 233223337777777776654 44544 44556666666766
Q ss_pred EEEEeCCCchhHHHHhcCCcceeEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 005131 253 VVITSGYSDENILKVLQGERIGTLFHQDAHILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADAL 325 (713)
Q Consensus 253 v~I~~g~~~~~l~~~~tge~iGT~i~~~~~~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l 325 (713)
+-.- + . -..+. ++|+..++++--++...+..+++..|.++|.++++.=
T Consensus 128 ~~~~----~----------~-~e~~I----------PeeLq~alda~palk~~f~~Ltpgrq~ayl~~~~~aK 175 (200)
T COG4430 128 VALK----K----------N-EELII----------PEELQDALDANPALKTAFEALTPGRQRAYLFRISQAK 175 (200)
T ss_pred cCCC----c----------c-cccCC----------cHHHHHHHhcCHHHHHHHHhcCCcchHHHHHHHhccc
Confidence 5111 1 1 11222 4578888776656666667788888888988887643
No 261
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=24.85 E-value=1.1e+02 Score=31.23 Aligned_cols=46 Identities=13% Similarity=0.278 Sum_probs=35.6
Q ss_pred hccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecCh
Q 005131 9 KDVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGA 59 (713)
Q Consensus 9 ~~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg 59 (713)
+|.+.+++=+.|+.+.+.. .+. .+..+.|+.++++|.+++|++|-.
T Consensus 1 ~~~kli~~DlDGTLl~~~~-~i~----~~~~~al~~~~~~g~~v~iaTGR~ 46 (264)
T COG0561 1 MMIKLLAFDLDGTLLDSNK-TIS----PETKEALARLREKGVKVVLATGRP 46 (264)
T ss_pred CCeeEEEEcCCCCccCCCC-ccC----HHHHHHHHHHHHCCCEEEEECCCC
Confidence 3567888999999998865 233 467777778889999999996654
No 262
>PLN02645 phosphoglycolate phosphatase
Probab=22.88 E-value=1.1e+02 Score=32.32 Aligned_cols=52 Identities=12% Similarity=0.283 Sum_probs=40.3
Q ss_pred hhhhhhccceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhh
Q 005131 4 SRAFVKDVKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGAVG 61 (713)
Q Consensus 4 ~~~~~~~~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg~~ 61 (713)
.++.+..++.+++=+-|.++.+.. .+....+.|+.+++.|.+++++++....
T Consensus 21 ~~~~~~~~~~~~~D~DGtl~~~~~------~~~ga~e~l~~lr~~g~~~~~~TN~~~~ 72 (311)
T PLN02645 21 ADELIDSVETFIFDCDGVIWKGDK------LIEGVPETLDMLRSMGKKLVFVTNNSTK 72 (311)
T ss_pred HHHHHHhCCEEEEeCcCCeEeCCc------cCcCHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 345556788899999999998654 3456788888888999999999877633
No 263
>PLN03017 trehalose-phosphatase
Probab=22.71 E-value=2.4e+02 Score=30.74 Aligned_cols=65 Identities=15% Similarity=0.309 Sum_probs=44.0
Q ss_pred HHHHHHhhhCCCEEEEeecCCcccc---CCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCc
Q 005131 176 LAALLALELKADLLILLSDVEGLYS---GPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIP 252 (713)
Q Consensus 176 ~A~~lA~~l~Ad~li~~TdV~GV~~---~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~ 252 (713)
....++...+-.++++++|.||=+. +|| +.. .|.++++.++..+.++++
T Consensus 99 ~~~~~~~~~~~k~~llflD~DGTL~Piv~~p---~~a-------------------------~i~~~~~~aL~~La~~~~ 150 (366)
T PLN03017 99 MFEQIMEASRGKQIVMFLDYDGTLSPIVDDP---DKA-------------------------FMSSKMRRTVKKLAKCFP 150 (366)
T ss_pred HHHHHHHHhcCCCeEEEEecCCcCcCCcCCc---ccc-------------------------cCCHHHHHHHHHHhcCCc
Confidence 3455666777788999999999775 222 111 123333444555557888
Q ss_pred EEEEeCCCchhHHHHh
Q 005131 253 VVITSGYSDENILKVL 268 (713)
Q Consensus 253 v~I~~g~~~~~l~~~~ 268 (713)
+.|++|+....+....
T Consensus 151 vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 151 TAIVTGRCIDKVYNFV 166 (366)
T ss_pred EEEEeCCCHHHHHHhh
Confidence 9999999999887664
No 264
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=22.64 E-value=1.1e+02 Score=31.57 Aligned_cols=44 Identities=16% Similarity=0.073 Sum_probs=32.9
Q ss_pred cceEEEEeCccceecCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecCh
Q 005131 11 VKRIVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQGYEVILVSSGA 59 (713)
Q Consensus 11 ~~~iViKlGGs~l~~~~~~~~~~~~~~~~~~i~~~~~~g~~vviV~ggg 59 (713)
.+.++.=+-|+++.++. .+. .+..+.|+.+++.|.+++|.+|=.
T Consensus 7 ~~lI~~DlDGTLL~~~~-~i~----~~~~~ai~~l~~~Gi~~viaTGR~ 50 (271)
T PRK03669 7 PLLIFTDLDGTLLDSHT-YDW----QPAAPWLTRLREAQVPVILCSSKT 50 (271)
T ss_pred CeEEEEeCccCCcCCCC-cCc----HHHHHHHHHHHHcCCeEEEEcCCC
Confidence 67788899999997643 222 356677888989999998885554
No 265
>COG0166 Pgi Glucose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=21.91 E-value=4.9e+02 Score=29.25 Aligned_cols=143 Identities=11% Similarity=0.079 Sum_probs=81.6
Q ss_pred cchhHHHHHHHhhhCCC-----EEEEeecCCccccCCCCCCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHH
Q 005131 171 WDNDSLAALLALELKAD-----LLILLSDVEGLYSGPPSDPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVN 245 (713)
Q Consensus 171 ~~sD~~A~~lA~~l~Ad-----~li~~TdV~GV~~~dP~~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~ 245 (713)
++||..+.++..+|... ++.|++|||+=+..+. +..+..++..-.+... +|.-...+..+..
T Consensus 88 GGS~LG~~~~~~aL~~~~~~~~~~~Fv~nid~~~~~~~-------l~~i~~~~tl~iviSK------SGtT~Et~~n~~~ 154 (446)
T COG0166 88 GGSDLGPRAVTEALRPYAPNGPRVHFVSNVDPTYLAEV-------LKKLDPETTLFIVISK------SGTTLETLTNFRL 154 (446)
T ss_pred chhHHHHHHHHHHhhhhccCCCceEEecCCCchhhhHH-------HhccCcccEEEEEEeC------CCCcHHHHHHHHH
Confidence 45788888888888643 5689999999776643 3333333222111111 1111111122222
Q ss_pred HHH-------cCCcEEEEeCCCchhHHHHhcCCcceeEEecC-----CCCCCCCC-------HHHHHHHHHHHHHHHHHH
Q 005131 246 AAY-------AGIPVVITSGYSDENILKVLQGERIGTLFHQD-----AHILDPFN-------EVGAREMAVAARESSRRL 306 (713)
Q Consensus 246 a~~-------~gv~v~I~~g~~~~~l~~~~tge~iGT~i~~~-----~~~~~~~t-------~~~v~~av~~A~~a~~~w 306 (713)
+.+ +..+..++-....+.+...+..+..-+...++ .+.|+..+ ..++++.++-|+++.+..
T Consensus 155 ~r~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~f~ipd~VGGRfS~~SaVG~l~~a~~~~~~~~lL~Ga~~~d~~~ 234 (446)
T COG0166 155 ARKWLEKKEEAAKKHFVATSTNGGALAVLAGENGLETFEIPDWVGGRYSVLSAVGLLPLALGGIDFKELLEGAAAADEHF 234 (446)
T ss_pred HHHHHHhhhhhhhcEEEEEcCCchHHHHhcCCCceeEEECCCCCCCccchhHHHHHHHHHHhcccHHHHHHHHHHHHHHh
Confidence 222 22335556556666666555544444444443 13344443 467888899999999988
Q ss_pred hcCCHHHHHHHHHHHHHHHH
Q 005131 307 QAMSSEDRKKILLDIADALE 326 (713)
Q Consensus 307 ~~~~~~~R~~~L~~~a~~l~ 326 (713)
+..+.++=..+|..++....
T Consensus 235 ~~~~l~~N~~~l~ali~~~~ 254 (446)
T COG0166 235 RTTPLEENLAVLYALIGIWY 254 (446)
T ss_pred ccCChhhcHHHHHHHHHHHH
Confidence 88888887777777766444
No 266
>PF00505 HMG_box: HMG (high mobility group) box; InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=21.53 E-value=2e+02 Score=22.41 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=26.7
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHH
Q 005131 299 ARESSRRLQAMSSEDRKKILLDIADALEANEELI 332 (713)
Q Consensus 299 A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 332 (713)
.+.+...|..+|.++|..+-.........+..++
T Consensus 32 ~~~~~~~W~~l~~~eK~~y~~~a~~~~~~y~~~~ 65 (69)
T PF00505_consen 32 SKILAQMWKNLSEEEKAPYKEEAEEEKERYEKEM 65 (69)
T ss_dssp HHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555668999999999999888777777766655
No 267
>PLN02151 trehalose-phosphatase
Probab=21.45 E-value=2.7e+02 Score=30.22 Aligned_cols=66 Identities=21% Similarity=0.354 Sum_probs=43.9
Q ss_pred HHHHHhhhCCCEEEEeecCCccccCCCC--CCCCcceeeeeccccchhhhcCCCCccccCchHHHHHHHHHHHHcCCcEE
Q 005131 177 AALLALELKADLLILLSDVEGLYSGPPS--DPQSKLIDTYVKERHQGEITFGDKSRVGRGGMTAKVKAAVNAAYAGIPVV 254 (713)
Q Consensus 177 A~~lA~~l~Ad~li~~TdV~GV~~~dP~--~~~a~~i~~is~~e~~~~~~~~~~~~~~~g~m~~Kl~aa~~a~~~gv~v~ 254 (713)
...+....++.++.++.|.||=+. |. +|+. -.|.+.++.++..+..+.++.
T Consensus 87 ~~~~~~~~~~~~~ll~lDyDGTL~--PIv~~P~~-------------------------A~~~~~~~~aL~~La~~~~va 139 (354)
T PLN02151 87 FEEILHKSEGKQIVMFLDYDGTLS--PIVDDPDR-------------------------AFMSKKMRNTVRKLAKCFPTA 139 (354)
T ss_pred HHHHHHhhcCCceEEEEecCccCC--CCCCCccc-------------------------ccCCHHHHHHHHHHhcCCCEE
Confidence 334555577888999999999775 21 1111 122344445555555677899
Q ss_pred EEeCCCchhHHHHhc
Q 005131 255 ITSGYSDENILKVLQ 269 (713)
Q Consensus 255 I~~g~~~~~l~~~~t 269 (713)
|++|+..+.+...+.
T Consensus 140 IvSGR~~~~l~~~~~ 154 (354)
T PLN02151 140 IVSGRCREKVSSFVK 154 (354)
T ss_pred EEECCCHHHHHHHcC
Confidence 999999998887764
No 268
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=21.44 E-value=2.3e+02 Score=22.58 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=24.7
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHH
Q 005131 299 ARESSRRLQAMSSEDRKKILLDIADALEANEEL 331 (713)
Q Consensus 299 A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 331 (713)
++.....|+.++.++|...........+++.++
T Consensus 33 sk~l~~~Wk~ls~~eK~~y~~~a~~~k~~y~~~ 65 (72)
T cd01388 33 SKILGDRWKALSNEEKQPYYEEAKKLKELHMKL 65 (72)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 555667899999999998887766665555543
No 269
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=21.41 E-value=1.8e+02 Score=29.81 Aligned_cols=28 Identities=11% Similarity=0.148 Sum_probs=19.3
Q ss_pred HHHHHHHHcCCcEEEEeCCCchhHHHHh
Q 005131 241 KAAVNAAYAGIPVVITSGYSDENILKVL 268 (713)
Q Consensus 241 ~aa~~a~~~gv~v~I~~g~~~~~l~~~~ 268 (713)
+++..+.+.|+.+.|++||.+..+...+
T Consensus 26 ~ai~~l~~~G~~~~iaTGR~~~~~~~~~ 53 (272)
T PRK15126 26 STLARLRERDITLTFATGRHVLEMQHIL 53 (272)
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHH
Confidence 4556666678888888888777665443
No 270
>smart00398 HMG high mobility group.
Probab=21.34 E-value=2.6e+02 Score=21.58 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=26.4
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHH
Q 005131 299 ARESSRRLQAMSSEDRKKILLDIADALEANEELI 332 (713)
Q Consensus 299 A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 332 (713)
.+.....|..++.++|..+........+++..++
T Consensus 33 ~~~~~~~W~~l~~~ek~~y~~~a~~~~~~y~~~~ 66 (70)
T smart00398 33 SKKLGERWKLLSEEEKAPYEEKAKKDKERYEEEM 66 (70)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455678999999999999988777666666554
No 271
>PF03295 Pox_TAA1: Poxvirus trans-activator protein A1 C-terminal; InterPro: IPR004975 Late transcription factor VLTF-2, acts with RNA polymerase to initiate transcription from late gene promoters [].
Probab=20.56 E-value=1.1e+02 Score=23.71 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=29.7
Q ss_pred CccccccCceEEEEEeCCHHHHHHHHHccC--CC-ceeEEEcCC
Q 005131 588 SFHHEYNSMACTIEIVDDVHAAIGHIHQHG--SG-HTDCIITND 628 (713)
Q Consensus 588 ~~~eE~FgPvl~v~~~~~~~eAi~~~N~~~--~g-L~a~v~t~d 628 (713)
..+||-=--+||+.-|++.|+.++++|..+ -| -..+.|-+|
T Consensus 8 ALREEPKisLLPLv~Y~~Pe~Vi~iIN~lR~keGvYG~c~~~e~ 51 (63)
T PF03295_consen 8 ALREEPKISLLPLVFYEDPEEVINIINELRNKEGVYGSCYYKEN 51 (63)
T ss_pred eeccCCcceEEeeeeccCHHHHHHHHHHhhhccCceeEEEEecC
Confidence 356776667899999999999999999852 23 235555554
No 272
>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT). This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions [].
Probab=20.22 E-value=1.9e+02 Score=30.14 Aligned_cols=46 Identities=15% Similarity=0.091 Sum_probs=40.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHc
Q 005131 283 ILDPFNEVGAREMAVAARESSRRLQAMSSEDRKKILLDIADALEAN 328 (713)
Q Consensus 283 ~~~~~t~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~ 328 (713)
.|...+..++++.....+.-.+.|+.-...||...+.-+.+.|++.
T Consensus 2 ~~~~~~~~d~~kV~s~L~q~~RDWS~eg~~ER~~~~~~I~~~L~~~ 47 (270)
T PF07942_consen 2 EWVHPSPSDMDKVRSTLKQFVRDWSSEGEEERDPCYSPILDELESL 47 (270)
T ss_pred CcccCchhhHHHHHHHHHHHHhhCchhhHHHHHHHHHHHHHHHHHh
Confidence 4666678899999999999999999999999999999998888765
Done!