Query 005134
Match_columns 712
No_of_seqs 373 out of 2690
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 16:24:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005134.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005134hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ihg_A RDME; flavoenzyme, anth 100.0 1.9E-79 6.6E-84 700.4 55.1 524 40-701 2-535 (535)
2 2r0c_A REBC; flavin adenine di 100.0 3E-69 1E-73 616.9 49.2 542 16-701 4-548 (549)
3 1pn0_A Phenol 2-monooxygenase; 100.0 1E-60 3.4E-65 556.4 52.8 556 41-702 6-648 (665)
4 2qa2_A CABE, polyketide oxygen 100.0 1.4E-60 4.8E-65 538.5 49.8 486 41-702 10-498 (499)
5 2qa1_A PGAE, polyketide oxygen 100.0 2.1E-60 7.3E-65 537.2 51.2 486 41-702 9-497 (500)
6 2dkh_A 3-hydroxybenzoate hydro 100.0 7E-58 2.4E-62 531.6 47.6 547 42-699 31-637 (639)
7 3fmw_A Oxygenase; mithramycin, 100.0 5.1E-54 1.7E-58 491.5 43.4 496 41-703 47-546 (570)
8 4hb9_A Similarities with proba 100.0 4.7E-41 1.6E-45 369.3 25.6 353 44-430 2-383 (412)
9 3rp8_A Flavoprotein monooxygen 100.0 1.6E-37 5.3E-42 342.0 30.9 340 40-431 20-370 (407)
10 3c96_A Flavin-containing monoo 100.0 4.8E-36 1.7E-40 330.5 31.8 345 42-428 3-369 (410)
11 1k0i_A P-hydroxybenzoate hydro 100.0 1.5E-36 5.2E-41 332.5 26.3 338 43-429 2-348 (394)
12 2x3n_A Probable FAD-dependent 100.0 6.8E-37 2.3E-41 336.0 23.3 341 41-431 4-359 (399)
13 2vou_A 2,6-dihydroxypyridine h 100.0 1.4E-36 4.9E-41 333.3 23.8 335 41-431 3-368 (397)
14 2xdo_A TETX2 protein; tetracyc 100.0 3.5E-35 1.2E-39 322.4 25.6 341 41-431 24-385 (398)
15 3oz2_A Digeranylgeranylglycero 100.0 1.7E-32 6E-37 299.0 36.1 329 41-419 2-338 (397)
16 3alj_A 2-methyl-3-hydroxypyrid 100.0 2.7E-33 9.2E-38 305.3 29.1 323 41-426 9-345 (379)
17 3e1t_A Halogenase; flavoprotei 100.0 2.2E-31 7.5E-36 301.7 30.5 348 40-431 4-369 (512)
18 3c4a_A Probable tryptophan hyd 100.0 5.4E-33 1.8E-37 303.2 14.3 319 44-433 1-333 (381)
19 3cgv_A Geranylgeranyl reductas 100.0 7.7E-31 2.6E-35 286.9 28.3 336 41-429 2-348 (397)
20 3atr_A Conserved archaeal prot 100.0 9.8E-31 3.3E-35 291.9 29.4 332 42-426 5-350 (453)
21 3i3l_A Alkylhalidase CMLS; fla 100.0 7.1E-31 2.4E-35 300.6 27.9 345 41-428 21-378 (591)
22 3nix_A Flavoprotein/dehydrogen 100.0 3.8E-30 1.3E-34 284.0 32.8 342 41-420 3-348 (421)
23 2pyx_A Tryptophan halogenase; 100.0 3.7E-30 1.3E-34 292.6 24.6 344 41-429 5-413 (526)
24 2gmh_A Electron transfer flavo 100.0 1.7E-28 5.8E-33 281.5 36.4 332 41-416 33-409 (584)
25 2aqj_A Tryptophan halogenase, 100.0 3.1E-27 1.1E-31 269.3 31.4 340 41-429 3-397 (538)
26 2bry_A NEDD9 interacting prote 100.0 1.2E-28 4E-33 277.8 17.6 307 42-418 91-449 (497)
27 2weu_A Tryptophan 5-halogenase 100.0 4.4E-27 1.5E-31 266.4 30.6 336 44-429 3-405 (511)
28 2e4g_A Tryptophan halogenase; 100.0 3.6E-27 1.2E-31 269.2 27.6 339 41-429 23-428 (550)
29 3ihm_A Styrene monooxygenase A 99.9 1.8E-24 6E-29 239.6 23.2 321 41-425 20-372 (430)
30 1yvv_A Amine oxidase, flavin-c 99.8 6.4E-17 2.2E-21 172.2 23.4 293 43-398 2-328 (336)
31 2gag_B Heterotetrameric sarcos 99.6 1.3E-14 4.6E-19 158.4 21.8 218 151-417 170-392 (405)
32 3kkj_A Amine oxidase, flavin-c 99.6 5.6E-14 1.9E-18 142.8 17.1 36 43-78 2-37 (336)
33 1ryi_A Glycine oxidase; flavop 99.5 9.7E-14 3.3E-18 150.4 16.7 209 150-414 159-377 (382)
34 1y56_B Sarcosine oxidase; dehy 99.4 6.1E-13 2.1E-17 144.1 15.3 69 151-246 145-215 (382)
35 3v76_A Flavoprotein; structura 99.3 3.9E-12 1.3E-16 139.5 13.7 143 40-237 24-187 (417)
36 2oln_A NIKD protein; flavoprot 99.3 2.2E-11 7.4E-16 132.7 19.5 67 152-245 150-217 (397)
37 2gf3_A MSOX, monomeric sarcosi 99.3 2.2E-11 7.6E-16 132.0 19.2 67 151-244 146-213 (389)
38 3nyc_A D-arginine dehydrogenas 99.3 4.3E-11 1.5E-15 129.1 20.6 69 151-246 150-219 (381)
39 3dme_A Conserved exported prot 99.3 1.7E-11 5.7E-16 131.6 17.1 72 151-246 146-220 (369)
40 2ywl_A Thioredoxin reductase r 99.3 3.8E-11 1.3E-15 115.7 17.7 118 44-246 2-119 (180)
41 2i0z_A NAD(FAD)-utilizing dehy 99.3 1.3E-11 4.4E-16 136.9 14.0 166 41-247 24-212 (447)
42 2qcu_A Aerobic glycerol-3-phos 99.3 8.1E-10 2.8E-14 124.2 28.3 73 151-244 145-219 (501)
43 3ps9_A TRNA 5-methylaminomethy 99.3 1.1E-10 3.8E-15 136.2 21.5 70 151-246 413-483 (676)
44 3dje_A Fructosyl amine: oxygen 99.3 8.2E-11 2.8E-15 129.9 18.7 62 151-238 157-222 (438)
45 3da1_A Glycerol-3-phosphate de 99.3 1.6E-09 5.6E-14 123.3 29.8 75 151-246 166-242 (561)
46 1rp0_A ARA6, thiazole biosynth 99.3 3.5E-11 1.2E-15 125.0 14.2 143 42-243 38-197 (284)
47 3nlc_A Uncharacterized protein 99.2 3.1E-11 1.1E-15 136.2 12.9 69 154-248 219-292 (549)
48 3pvc_A TRNA 5-methylaminomethy 99.2 2.6E-10 9E-15 133.2 20.7 71 151-246 408-479 (689)
49 3jsk_A Cypbp37 protein; octame 99.2 1.5E-10 5.1E-15 122.2 15.0 143 42-243 78-257 (344)
50 2gqf_A Hypothetical protein HI 99.2 1.6E-10 5.4E-15 126.1 13.8 142 41-237 2-168 (401)
51 3c4n_A Uncharacterized protein 99.2 5.7E-11 1.9E-15 129.9 9.7 70 151-247 168-248 (405)
52 3i6d_A Protoporphyrinogen oxid 99.1 4.6E-10 1.6E-14 124.7 16.4 63 42-105 4-87 (470)
53 3nrn_A Uncharacterized protein 99.1 4.5E-10 1.5E-14 123.3 16.2 35 44-78 1-35 (421)
54 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 6.3E-10 2.2E-14 118.6 15.8 35 44-78 2-39 (342)
55 2cul_A Glucose-inhibited divis 99.1 4.9E-10 1.7E-14 112.7 14.1 134 42-248 2-136 (232)
56 1qo8_A Flavocytochrome C3 fuma 99.1 4.7E-10 1.6E-14 128.1 14.5 162 41-243 119-318 (566)
57 2uzz_A N-methyl-L-tryptophan o 99.1 1.1E-09 3.6E-14 118.0 15.3 60 152-238 146-205 (372)
58 1y0p_A Fumarate reductase flav 99.1 1.1E-09 3.8E-14 125.1 15.4 160 41-241 124-321 (571)
59 4a9w_A Monooxygenase; baeyer-v 99.0 8.5E-10 2.9E-14 117.5 12.9 131 42-238 2-133 (357)
60 3itj_A Thioredoxin reductase 1 99.0 5.4E-10 1.8E-14 118.2 10.8 125 41-239 20-144 (338)
61 2zbw_A Thioredoxin reductase; 99.0 2.3E-09 8E-14 113.5 15.1 127 41-245 3-129 (335)
62 2gv8_A Monooxygenase; FMO, FAD 99.0 1.1E-09 3.9E-14 121.2 13.0 70 151-240 111-180 (447)
63 3ka7_A Oxidoreductase; structu 99.0 3.2E-09 1.1E-13 116.4 16.3 35 44-78 1-35 (425)
64 3ab1_A Ferredoxin--NADP reduct 99.0 1.6E-09 5.4E-14 116.2 12.6 125 42-244 13-138 (360)
65 1kf6_A Fumarate reductase flav 99.0 4.5E-09 1.5E-13 120.5 16.7 71 154-244 133-204 (602)
66 2vvm_A Monoamine oxidase N; FA 99.0 5.2E-08 1.8E-12 109.1 24.9 61 43-104 39-114 (495)
67 3ces_A MNMG, tRNA uridine 5-ca 99.0 5.1E-09 1.8E-13 119.1 16.2 154 42-244 27-188 (651)
68 1chu_A Protein (L-aspartate ox 99.0 4.9E-09 1.7E-13 118.7 15.4 37 41-78 6-42 (540)
69 4at0_A 3-ketosteroid-delta4-5a 98.9 2.2E-08 7.7E-13 112.7 19.7 38 41-78 39-76 (510)
70 2zxi_A TRNA uridine 5-carboxym 98.9 1.2E-08 4.2E-13 115.6 17.0 152 42-242 26-185 (637)
71 2rgh_A Alpha-glycerophosphate 98.9 1E-07 3.5E-12 108.6 24.7 73 152-245 185-259 (571)
72 2gjc_A Thiazole biosynthetic e 98.9 1E-08 3.4E-13 107.6 14.4 144 42-244 64-246 (326)
73 3s5w_A L-ornithine 5-monooxyge 98.9 7.9E-09 2.7E-13 114.8 14.2 152 42-237 29-192 (463)
74 3axb_A Putative oxidoreductase 98.9 1.1E-08 3.8E-13 113.1 15.1 70 151-246 177-264 (448)
75 3cp8_A TRNA uridine 5-carboxym 98.9 1.2E-08 4.1E-13 116.0 15.7 150 41-241 19-178 (641)
76 1vdc_A NTR, NADPH dependent th 98.9 3E-09 1E-13 112.5 9.7 121 41-239 6-126 (333)
77 1w4x_A Phenylacetone monooxyge 98.9 1.7E-08 5.8E-13 114.5 16.4 142 41-240 14-157 (542)
78 1pj5_A N,N-dimethylglycine oxi 98.9 1.1E-08 3.7E-13 122.2 14.4 70 151-246 147-217 (830)
79 2xve_A Flavin-containing monoo 98.9 1.3E-08 4.5E-13 113.1 13.8 157 44-240 3-169 (464)
80 2wdq_A Succinate dehydrogenase 98.9 3.8E-08 1.3E-12 112.5 17.6 64 155-239 143-208 (588)
81 2bs2_A Quinol-fumarate reducta 98.9 7.4E-08 2.5E-12 111.3 20.1 64 155-239 158-222 (660)
82 2q0l_A TRXR, thioredoxin reduc 98.8 1.5E-08 5.1E-13 106.0 13.1 115 44-240 2-117 (311)
83 3lzw_A Ferredoxin--NADP reduct 98.8 1.1E-08 3.8E-13 107.8 12.0 120 42-240 6-126 (332)
84 3lov_A Protoporphyrinogen oxid 98.8 5.6E-08 1.9E-12 108.2 18.3 62 43-105 4-82 (475)
85 3gwf_A Cyclohexanone monooxyge 98.8 1.1E-08 3.7E-13 115.8 12.5 141 41-239 6-149 (540)
86 3k7m_X 6-hydroxy-L-nicotine ox 98.8 4.9E-07 1.7E-11 99.2 25.1 35 44-78 2-36 (431)
87 3f8d_A Thioredoxin reductase ( 98.8 1.8E-08 6E-13 105.7 12.5 113 42-238 14-126 (323)
88 1d4d_A Flavocytochrome C fumar 98.8 6.4E-08 2.2E-12 110.5 17.7 67 154-242 254-322 (572)
89 4dgk_A Phytoene dehydrogenase; 98.8 2.3E-07 7.8E-12 103.9 21.5 35 44-78 2-36 (501)
90 1s3e_A Amine oxidase [flavin-c 98.8 4.4E-07 1.5E-11 102.3 23.8 37 42-78 3-39 (520)
91 4ap3_A Steroid monooxygenase; 98.8 2.7E-08 9.2E-13 112.8 13.8 140 41-238 19-160 (549)
92 3fbs_A Oxidoreductase; structu 98.8 3.8E-08 1.3E-12 101.9 13.8 113 44-240 3-115 (297)
93 3gyx_A Adenylylsulfate reducta 98.8 7.6E-08 2.6E-12 111.1 17.5 173 39-239 18-235 (662)
94 3cty_A Thioredoxin reductase; 98.8 3.9E-08 1.3E-12 103.4 13.1 113 42-238 15-127 (319)
95 2h88_A Succinate dehydrogenase 98.8 8.4E-08 2.9E-12 110.0 16.8 64 155-239 155-219 (621)
96 2q7v_A Thioredoxin reductase; 98.8 4.7E-08 1.6E-12 103.0 13.6 115 42-238 7-124 (325)
97 3uox_A Otemo; baeyer-villiger 98.7 4.4E-08 1.5E-12 111.0 13.3 141 41-239 7-149 (545)
98 2e5v_A L-aspartate oxidase; ar 98.7 1.2E-07 4.2E-12 105.5 16.5 31 45-75 1-31 (472)
99 1trb_A Thioredoxin reductase; 98.7 6.4E-08 2.2E-12 101.6 13.1 115 41-238 3-117 (320)
100 3d1c_A Flavin-containing putat 98.7 5.6E-08 1.9E-12 104.2 12.8 141 42-238 3-144 (369)
101 2jae_A L-amino acid oxidase; o 98.7 6E-07 2.1E-11 100.3 21.5 38 41-78 9-46 (489)
102 2a87_A TRXR, TR, thioredoxin r 98.7 1.4E-08 4.9E-13 107.6 7.5 115 41-238 12-127 (335)
103 2a8x_A Dihydrolipoyl dehydroge 98.7 7.6E-08 2.6E-12 107.0 12.8 144 43-240 3-149 (464)
104 4gut_A Lysine-specific histone 98.7 5.1E-08 1.7E-12 114.4 11.8 37 42-78 335-371 (776)
105 1c0p_A D-amino acid oxidase; a 98.7 4E-08 1.4E-12 105.4 10.0 37 41-77 4-40 (363)
106 1fl2_A Alkyl hydroperoxide red 98.7 6.1E-08 2.1E-12 101.3 10.9 113 43-238 1-116 (310)
107 4fk1_A Putative thioredoxin re 98.6 9.3E-08 3.2E-12 99.9 11.4 37 40-76 3-39 (304)
108 1ojt_A Surface protein; redox- 98.6 1.2E-07 4.2E-12 105.8 12.1 37 42-78 5-41 (482)
109 1jnr_A Adenylylsulfate reducta 98.6 4.3E-07 1.5E-11 105.0 16.5 38 41-78 20-61 (643)
110 4b63_A L-ornithine N5 monooxyg 98.6 6.5E-07 2.2E-11 100.4 16.0 65 150-235 140-212 (501)
111 3o0h_A Glutathione reductase; 98.6 5.1E-07 1.7E-11 100.9 15.1 35 41-75 24-58 (484)
112 1v59_A Dihydrolipoamide dehydr 98.6 2.1E-07 7.1E-12 103.8 11.5 37 42-78 4-40 (478)
113 1hyu_A AHPF, alkyl hydroperoxi 98.5 2.7E-07 9.4E-12 104.0 11.4 115 41-238 210-327 (521)
114 3urh_A Dihydrolipoyl dehydroge 98.5 1.6E-06 5.3E-11 97.1 17.1 37 41-77 23-59 (491)
115 2ivd_A PPO, PPOX, protoporphyr 98.5 2.6E-07 8.9E-12 102.8 10.4 63 42-105 15-92 (478)
116 1dxl_A Dihydrolipoamide dehydr 98.5 2.3E-07 7.9E-12 103.2 9.2 37 42-78 5-41 (470)
117 3nks_A Protoporphyrinogen oxid 98.4 3.3E-07 1.1E-11 101.9 9.1 35 44-78 3-39 (477)
118 3r9u_A Thioredoxin reductase; 98.4 1.4E-06 4.9E-11 90.7 11.5 113 42-237 3-118 (315)
119 3g3e_A D-amino-acid oxidase; F 98.4 4.5E-08 1.5E-12 104.4 -0.4 33 44-76 1-39 (351)
120 4a5l_A Thioredoxin reductase; 98.3 4.7E-07 1.6E-11 94.6 7.2 34 43-76 4-37 (314)
121 3dk9_A Grase, GR, glutathione 98.3 1.1E-05 3.9E-10 89.6 18.2 36 41-76 18-53 (478)
122 3ics_A Coenzyme A-disulfide re 98.3 2.3E-06 7.8E-11 98.0 11.4 38 41-78 34-73 (588)
123 3lad_A Dihydrolipoamide dehydr 98.3 1E-05 3.5E-10 90.0 16.4 36 42-77 2-37 (476)
124 2bc0_A NADH oxidase; flavoprot 98.2 2.8E-06 9.7E-11 94.9 10.3 37 42-78 34-73 (490)
125 1zmd_A Dihydrolipoyl dehydroge 98.2 2.7E-06 9.2E-11 94.7 10.0 38 41-78 4-41 (474)
126 1ebd_A E3BD, dihydrolipoamide 98.2 6.3E-06 2.1E-10 91.2 12.8 34 42-75 2-35 (455)
127 3iwa_A FAD-dependent pyridine 98.2 3E-06 1E-10 94.2 10.2 36 43-78 3-40 (472)
128 3h8l_A NADH oxidase; membrane 98.2 1.9E-06 6.6E-11 93.9 8.2 33 44-76 2-37 (409)
129 3oc4_A Oxidoreductase, pyridin 98.2 6E-06 2E-10 91.3 11.9 36 44-79 3-40 (452)
130 1q1r_A Putidaredoxin reductase 98.2 3.3E-06 1.1E-10 92.7 9.7 35 43-77 4-40 (431)
131 4gcm_A TRXR, thioredoxin reduc 98.2 1E-06 3.4E-11 92.2 4.9 37 39-75 2-38 (312)
132 2cdu_A NADPH oxidase; flavoenz 98.2 5.9E-06 2E-10 91.3 11.1 35 44-78 1-37 (452)
133 3qfa_A Thioredoxin reductase 1 98.1 1.3E-05 4.3E-10 90.3 13.5 36 41-76 30-65 (519)
134 3cgb_A Pyridine nucleotide-dis 98.1 7E-06 2.4E-10 91.5 11.3 35 44-78 37-73 (480)
135 3fpz_A Thiazole biosynthetic e 98.1 1.8E-06 6.2E-11 91.1 5.8 37 42-78 64-102 (326)
136 3fg2_P Putative rubredoxin red 98.1 6.8E-06 2.3E-10 89.4 10.6 35 44-78 2-38 (404)
137 2qae_A Lipoamide, dihydrolipoy 98.1 3.6E-06 1.2E-10 93.5 8.4 36 43-78 2-37 (468)
138 3dgh_A TRXR-1, thioredoxin red 98.1 3.4E-05 1.2E-09 86.0 16.2 35 41-75 7-41 (483)
139 1nhp_A NADH peroxidase; oxidor 98.1 1.5E-05 5E-10 87.9 12.9 35 44-78 1-37 (447)
140 2eq6_A Pyruvate dehydrogenase 98.1 2.1E-05 7.1E-10 87.2 14.1 104 44-239 170-273 (464)
141 3klj_A NAD(FAD)-dependent dehy 98.1 8.2E-06 2.8E-10 88.2 10.5 38 41-78 7-44 (385)
142 3pl8_A Pyranose 2-oxidase; sub 98.1 3.5E-05 1.2E-09 88.5 16.3 38 42-79 45-82 (623)
143 3kd9_A Coenzyme A disulfide re 98.1 6.4E-06 2.2E-10 91.0 9.6 36 43-78 3-40 (449)
144 1mo9_A ORF3; nucleotide bindin 98.1 3.3E-05 1.1E-09 87.0 15.6 37 41-77 41-77 (523)
145 3ntd_A FAD-dependent pyridine 98.1 8.5E-06 2.9E-10 92.7 10.7 35 44-78 2-38 (565)
146 3l8k_A Dihydrolipoyl dehydroge 98.1 8.1E-06 2.8E-10 90.6 10.1 36 42-77 3-38 (466)
147 2yqu_A 2-oxoglutarate dehydrog 98.1 2.1E-05 7.3E-10 86.8 13.4 100 43-239 167-266 (455)
148 4gde_A UDP-galactopyranose mut 98.1 1.9E-06 6.5E-11 96.6 4.8 38 41-78 8-46 (513)
149 2v3a_A Rubredoxin reductase; a 98.1 1.7E-05 5.9E-10 85.5 12.2 101 43-239 145-245 (384)
150 3lxd_A FAD-dependent pyridine 98.0 1.1E-05 3.7E-10 88.1 10.1 37 42-78 8-46 (415)
151 1zk7_A HGII, reductase, mercur 98.0 4.4E-05 1.5E-09 84.6 15.0 35 42-76 3-37 (467)
152 2yqu_A 2-oxoglutarate dehydrog 98.0 9.3E-06 3.2E-10 89.8 9.5 34 44-77 2-35 (455)
153 2yg5_A Putrescine oxidase; oxi 98.0 6.8E-06 2.3E-10 90.6 7.5 39 40-78 2-40 (453)
154 2eq6_A Pyruvate dehydrogenase 98.0 2.6E-05 8.9E-10 86.4 11.6 35 42-76 5-39 (464)
155 1v59_A Dihydrolipoamide dehydr 98.0 8.7E-05 3E-09 82.4 15.7 105 43-239 183-289 (478)
156 2hqm_A GR, grase, glutathione 98.0 3.2E-05 1.1E-09 86.0 12.1 35 42-76 10-44 (479)
157 2gqw_A Ferredoxin reductase; f 98.0 1.1E-05 3.7E-10 88.0 7.9 37 42-78 6-44 (408)
158 3dgz_A Thioredoxin reductase 2 97.9 4.7E-05 1.6E-09 84.9 13.2 36 41-76 4-39 (488)
159 1xdi_A RV3303C-LPDA; reductase 97.9 2.9E-05 9.8E-10 86.9 10.4 34 43-76 2-38 (499)
160 3sx6_A Sulfide-quinone reducta 97.9 9.3E-06 3.2E-10 89.3 6.2 34 44-77 5-41 (437)
161 2e1m_A L-glutamate oxidase; L- 97.9 1.1E-05 3.9E-10 86.4 6.6 37 41-77 42-79 (376)
162 1sez_A Protoporphyrinogen oxid 97.9 1.2E-05 4.2E-10 89.9 7.2 62 42-104 12-88 (504)
163 1ebd_A E3BD, dihydrolipoamide 97.9 0.0001 3.5E-09 81.3 14.2 103 43-239 170-272 (455)
164 1xhc_A NADH oxidase /nitrite r 97.9 2.9E-05 9.9E-10 83.3 9.2 35 43-78 8-42 (367)
165 2bcg_G Secretory pathway GDP d 97.9 1.2E-05 4E-10 88.9 6.1 37 42-78 10-46 (453)
166 3ef6_A Toluene 1,2-dioxygenase 97.8 1.4E-05 4.9E-10 87.0 6.4 35 44-78 3-39 (410)
167 4eqs_A Coenzyme A disulfide re 97.8 4.5E-05 1.5E-09 83.8 10.4 34 45-78 2-37 (437)
168 3h28_A Sulfide-quinone reducta 97.8 2.3E-05 7.7E-10 86.0 7.6 35 44-78 3-39 (430)
169 1ges_A Glutathione reductase; 97.8 6.9E-05 2.4E-09 82.6 11.3 100 43-239 167-267 (450)
170 3s5w_A L-ornithine 5-monooxyge 97.8 0.00021 7.2E-09 78.9 15.2 142 43-237 227-377 (463)
171 2v3a_A Rubredoxin reductase; a 97.8 3.6E-05 1.2E-09 83.0 8.3 34 43-76 4-39 (384)
172 1rsg_A FMS1 protein; FAD bindi 97.8 1.4E-05 4.8E-10 89.8 5.2 38 41-78 6-44 (516)
173 1dxl_A Dihydrolipoamide dehydr 97.7 0.00015 5E-09 80.4 12.8 104 43-238 177-280 (470)
174 1y56_A Hypothetical protein PH 97.7 3.8E-05 1.3E-09 85.8 8.1 37 41-78 106-142 (493)
175 2b9w_A Putative aminooxidase; 97.7 2.4E-05 8.1E-10 85.4 6.0 37 42-78 5-42 (424)
176 1zmd_A Dihydrolipoyl dehydroge 97.7 0.00024 8.2E-09 78.8 13.9 105 43-238 178-283 (474)
177 3hdq_A UDP-galactopyranose mut 97.7 2.9E-05 1E-09 83.9 5.5 38 41-78 27-64 (397)
178 3hyw_A Sulfide-quinone reducta 97.7 3.1E-05 1.1E-09 84.9 5.7 33 45-77 4-38 (430)
179 1v0j_A UDP-galactopyranose mut 97.7 3.1E-05 1.1E-09 84.0 5.5 37 42-78 6-43 (399)
180 4dna_A Probable glutathione re 97.7 2.4E-05 8.2E-10 86.7 4.5 33 42-74 4-36 (463)
181 1nhp_A NADH peroxidase; oxidor 97.6 0.00018 6.2E-09 79.1 11.4 36 42-77 148-183 (447)
182 2qae_A Lipoamide, dihydrolipoy 97.6 0.00038 1.3E-08 77.1 13.7 103 43-238 174-277 (468)
183 1trb_A Thioredoxin reductase; 97.6 0.00045 1.5E-08 71.8 13.3 100 44-237 146-247 (320)
184 3ic9_A Dihydrolipoamide dehydr 97.6 2.8E-05 9.7E-10 86.8 4.3 36 41-76 6-41 (492)
185 2r9z_A Glutathione amide reduc 97.6 0.00026 8.8E-09 78.4 12.0 99 44-238 167-265 (463)
186 2iid_A L-amino-acid oxidase; f 97.6 7.2E-05 2.5E-09 83.5 7.3 37 42-78 32-68 (498)
187 1ojt_A Surface protein; redox- 97.6 0.00047 1.6E-08 76.6 13.4 103 43-239 185-288 (482)
188 2a8x_A Dihydrolipoyl dehydroge 97.5 0.00063 2.2E-08 75.2 13.7 101 43-237 171-271 (464)
189 4dsg_A UDP-galactopyranose mut 97.5 6.4E-05 2.2E-09 83.7 5.6 38 41-78 7-45 (484)
190 2bi7_A UDP-galactopyranose mut 97.5 5.1E-05 1.8E-09 81.9 4.7 36 43-78 3-38 (384)
191 4b1b_A TRXR, thioredoxin reduc 97.5 0.00053 1.8E-08 77.1 12.9 36 43-78 42-77 (542)
192 2hqm_A GR, grase, glutathione 97.5 0.00064 2.2E-08 75.4 13.3 101 43-239 185-287 (479)
193 3ic9_A Dihydrolipoamide dehydr 97.5 0.0008 2.7E-08 75.0 14.0 101 43-237 174-274 (492)
194 1i8t_A UDP-galactopyranose mut 97.5 6.4E-05 2.2E-09 80.6 4.6 35 44-78 2-36 (367)
195 3k30_A Histamine dehydrogenase 97.5 8.5E-05 2.9E-09 86.5 5.9 37 41-77 389-425 (690)
196 4g6h_A Rotenone-insensitive NA 97.4 0.00019 6.4E-09 80.3 8.2 37 41-77 40-76 (502)
197 1xdi_A RV3303C-LPDA; reductase 97.4 0.00086 3E-08 74.8 13.7 100 43-239 182-281 (499)
198 3vrd_B FCCB subunit, flavocyto 97.4 0.00046 1.6E-08 74.6 10.9 33 45-77 4-38 (401)
199 3lxd_A FAD-dependent pyridine 97.4 0.00082 2.8E-08 73.1 12.5 100 43-238 152-252 (415)
200 2vdc_G Glutamate synthase [NAD 97.4 0.00012 4E-09 80.9 5.6 37 42-78 121-157 (456)
201 1onf_A GR, grase, glutathione 97.4 0.00011 3.7E-09 82.2 5.2 34 43-76 2-35 (500)
202 3g5s_A Methylenetetrahydrofola 97.4 0.00016 5.4E-09 76.9 6.1 34 44-77 2-35 (443)
203 1fec_A Trypanothione reductase 97.4 0.00094 3.2E-08 74.3 12.8 100 43-239 187-290 (490)
204 1onf_A GR, grase, glutathione 97.4 0.00053 1.8E-08 76.6 10.7 101 43-239 176-277 (500)
205 1lvl_A Dihydrolipoamide dehydr 97.4 0.00049 1.7E-08 76.0 10.4 36 43-78 171-206 (458)
206 1d5t_A Guanine nucleotide diss 97.4 0.00016 5.4E-09 79.3 6.0 37 42-78 5-41 (433)
207 1q1r_A Putidaredoxin reductase 97.3 0.00077 2.6E-08 73.8 11.4 100 43-238 149-251 (431)
208 3iwa_A FAD-dependent pyridine 97.3 0.001 3.6E-08 73.5 12.7 98 44-237 160-258 (472)
209 3p1w_A Rabgdi protein; GDI RAB 97.3 0.00014 4.9E-09 80.1 5.4 38 41-78 18-55 (475)
210 2r9z_A Glutathione amide reduc 97.3 0.00012 4.2E-09 80.9 4.9 35 42-76 3-37 (463)
211 3ef6_A Toluene 1,2-dioxygenase 97.3 0.00077 2.6E-08 73.2 11.2 100 43-238 143-242 (410)
212 3itj_A Thioredoxin reductase 1 97.3 0.0012 4.2E-08 68.9 12.3 36 43-78 173-208 (338)
213 1ges_A Glutathione reductase; 97.3 0.00012 4.3E-09 80.6 4.6 35 42-76 3-37 (450)
214 3dgz_A Thioredoxin reductase 2 97.3 0.0024 8.3E-08 70.9 14.8 101 43-236 185-286 (488)
215 1lvl_A Dihydrolipoamide dehydr 97.3 0.00017 5.9E-09 79.6 5.3 35 41-75 3-37 (458)
216 2q0l_A TRXR, thioredoxin reduc 97.3 0.0023 8E-08 66.1 13.6 35 43-77 143-177 (311)
217 2wpf_A Trypanothione reductase 97.3 0.0016 5.6E-08 72.5 13.0 100 43-239 191-294 (495)
218 3cgb_A Pyridine nucleotide-dis 97.3 0.0012 4E-08 73.4 11.7 35 43-77 186-220 (480)
219 2cdu_A NADPH oxidase; flavoenz 97.2 0.0013 4.3E-08 72.4 11.7 99 43-237 149-247 (452)
220 1fl2_A Alkyl hydroperoxide red 97.2 0.002 6.8E-08 66.6 12.5 34 44-77 145-178 (310)
221 3ab1_A Ferredoxin--NADP reduct 97.2 0.0013 4.3E-08 69.8 11.2 35 44-78 164-198 (360)
222 3ntd_A FAD-dependent pyridine 97.2 0.0018 6.1E-08 73.4 12.3 34 44-77 152-185 (565)
223 2gqw_A Ferredoxin reductase; f 97.1 0.0016 5.4E-08 70.7 11.0 35 43-77 145-179 (408)
224 1b37_A Protein (polyamine oxid 97.1 0.00032 1.1E-08 77.7 5.5 37 42-78 3-40 (472)
225 3oc4_A Oxidoreductase, pyridin 97.1 0.0027 9.1E-08 69.8 12.5 97 44-237 148-244 (452)
226 1fec_A Trypanothione reductase 97.1 0.00026 9E-09 78.9 4.3 32 43-74 3-35 (490)
227 2zbw_A Thioredoxin reductase; 97.1 0.0032 1.1E-07 65.8 12.4 35 43-77 152-186 (335)
228 1m6i_A Programmed cell death p 97.1 0.0023 7.7E-08 71.3 11.7 99 44-238 181-283 (493)
229 2x8g_A Thioredoxin glutathione 97.1 0.00033 1.1E-08 80.1 5.0 35 41-75 105-139 (598)
230 1o94_A Tmadh, trimethylamine d 97.1 0.0004 1.4E-08 81.3 5.7 36 42-77 388-423 (729)
231 1kdg_A CDH, cellobiose dehydro 97.1 0.00039 1.3E-08 78.6 5.4 37 42-78 6-42 (546)
232 1lqt_A FPRA; NADP+ derivative, 97.1 0.00026 8.8E-09 78.2 3.7 36 42-77 2-44 (456)
233 3cty_A Thioredoxin reductase; 97.0 0.0039 1.3E-07 64.7 12.6 34 44-77 156-189 (319)
234 2wpf_A Trypanothione reductase 97.0 0.00033 1.1E-08 78.1 4.5 33 42-74 6-39 (495)
235 2bc0_A NADH oxidase; flavoprot 97.0 0.0026 8.8E-08 70.8 11.7 35 43-77 194-228 (490)
236 3qfa_A Thioredoxin reductase 1 97.0 0.0075 2.6E-07 67.5 15.3 32 44-75 211-242 (519)
237 1xhc_A NADH oxidase /nitrite r 96.9 0.0025 8.4E-08 68.1 10.2 35 44-78 144-178 (367)
238 1ps9_A 2,4-dienoyl-COA reducta 96.9 0.00055 1.9E-08 79.4 5.3 37 42-78 372-408 (671)
239 2z3y_A Lysine-specific histone 96.9 0.00057 1.9E-08 79.1 5.2 37 42-78 106-142 (662)
240 4dna_A Probable glutathione re 96.9 0.0026 8.8E-08 70.2 10.4 99 43-238 170-269 (463)
241 1vdc_A NTR, NADPH dependent th 96.9 0.004 1.4E-07 65.0 11.4 36 43-78 159-194 (333)
242 4b1b_A TRXR, thioredoxin reduc 96.9 0.0052 1.8E-07 69.0 12.8 99 42-238 222-320 (542)
243 2xag_A Lysine-specific histone 96.9 0.00059 2E-08 80.7 5.2 37 42-78 277-313 (852)
244 2q7v_A Thioredoxin reductase; 96.9 0.0077 2.6E-07 62.6 13.3 34 44-77 153-186 (325)
245 1gpe_A Protein (glucose oxidas 96.9 0.0011 3.8E-08 75.4 7.1 40 39-78 20-60 (587)
246 2gag_A Heterotetrameric sarcos 96.9 0.0006 2E-08 82.3 4.9 37 42-78 127-163 (965)
247 1m6i_A Programmed cell death p 96.8 0.0006 2.1E-08 76.0 4.4 37 42-78 10-48 (493)
248 1cjc_A Protein (adrenodoxin re 96.8 0.0007 2.4E-08 74.8 4.6 36 43-78 6-43 (460)
249 3d1c_A Flavin-containing putat 96.8 0.0046 1.6E-07 65.5 10.8 34 44-77 167-200 (369)
250 1ju2_A HydroxynitrIle lyase; f 96.8 0.00065 2.2E-08 76.5 4.2 37 41-78 24-60 (536)
251 1gte_A Dihydropyrimidine dehyd 96.8 0.00089 3.1E-08 81.3 5.6 36 43-78 187-223 (1025)
252 3f8d_A Thioredoxin reductase ( 96.8 0.008 2.8E-07 62.0 12.2 36 43-78 154-189 (323)
253 3t37_A Probable dehydrogenase; 96.7 0.00081 2.8E-08 75.4 4.6 36 42-77 16-52 (526)
254 3r9u_A Thioredoxin reductase; 96.7 0.012 4.1E-07 60.5 12.7 36 43-78 147-182 (315)
255 3q9t_A Choline dehydrogenase a 96.6 0.0011 3.6E-08 75.3 4.6 37 41-77 4-41 (577)
256 1n4w_A CHOD, cholesterol oxida 96.6 0.0012 3.9E-08 73.9 4.8 38 41-78 3-40 (504)
257 3lzw_A Ferredoxin--NADP reduct 96.6 0.0069 2.3E-07 62.9 10.5 35 43-77 154-188 (332)
258 2a87_A TRXR, TR, thioredoxin r 96.6 0.0072 2.5E-07 63.2 10.6 35 43-77 155-189 (335)
259 3ics_A Coenzyme A-disulfide re 96.6 0.0061 2.1E-07 69.4 10.7 105 44-247 188-294 (588)
260 3ayj_A Pro-enzyme of L-phenyla 96.6 0.00094 3.2E-08 77.0 3.3 36 43-78 56-100 (721)
261 2x8g_A Thioredoxin glutathione 96.5 0.03 1E-06 63.7 15.4 32 44-75 287-318 (598)
262 3kd9_A Coenzyme A disulfide re 96.5 0.0061 2.1E-07 66.8 9.1 34 44-77 149-182 (449)
263 3qvp_A Glucose oxidase; oxidor 96.5 0.0017 5.7E-08 73.7 4.6 36 41-76 17-53 (583)
264 1coy_A Cholesterol oxidase; ox 96.4 0.0021 7E-08 71.9 5.3 38 41-78 9-46 (507)
265 2jbv_A Choline oxidase; alcoho 96.4 0.0022 7.4E-08 72.4 5.2 37 42-78 12-49 (546)
266 3l8k_A Dihydrolipoyl dehydroge 96.4 0.0084 2.9E-07 66.1 9.8 36 43-78 172-207 (466)
267 1hyu_A AHPF, alkyl hydroperoxi 96.4 0.018 6E-07 64.5 12.5 34 44-77 356-389 (521)
268 4eqs_A Coenzyme A disulfide re 96.2 0.013 4.4E-07 64.1 9.9 34 44-77 148-181 (437)
269 3fim_B ARYL-alcohol oxidase; A 96.1 0.0022 7.5E-08 72.5 2.9 36 43-78 2-38 (566)
270 3gwf_A Cyclohexanone monooxyge 95.8 0.0056 1.9E-07 68.9 4.8 54 43-96 178-231 (540)
271 1vg0_A RAB proteins geranylger 95.8 0.0079 2.7E-07 68.4 5.9 38 42-79 7-44 (650)
272 1cjc_A Protein (adrenodoxin re 95.7 0.082 2.8E-06 58.1 13.5 36 43-78 145-201 (460)
273 3uox_A Otemo; baeyer-villiger 95.7 0.015 5E-07 65.5 7.4 55 43-97 185-239 (545)
274 3k30_A Histamine dehydrogenase 95.5 0.034 1.2E-06 64.5 9.9 34 44-77 524-559 (690)
275 3klj_A NAD(FAD)-dependent dehy 95.4 0.013 4.4E-07 63.0 5.5 37 43-79 146-182 (385)
276 2g1u_A Hypothetical protein TM 95.4 0.011 3.7E-07 54.5 4.3 35 43-77 19-53 (155)
277 3fwz_A Inner membrane protein 95.3 0.017 5.7E-07 52.3 5.2 36 42-77 6-41 (140)
278 1id1_A Putative potassium chan 95.3 0.019 6.6E-07 52.7 5.6 35 42-76 2-36 (153)
279 1lqt_A FPRA; NADP+ derivative, 95.2 0.092 3.1E-06 57.6 11.6 36 43-78 147-203 (456)
280 1lss_A TRK system potassium up 95.1 0.017 5.8E-07 51.7 4.5 33 44-76 5-37 (140)
281 3llv_A Exopolyphosphatase-rela 94.8 0.022 7.6E-07 51.3 4.5 33 44-76 7-39 (141)
282 3fbs_A Oxidoreductase; structu 94.8 0.055 1.9E-06 54.9 7.8 33 43-76 141-173 (297)
283 2gag_A Heterotetrameric sarcos 94.7 0.072 2.5E-06 64.1 9.9 34 44-77 285-318 (965)
284 3ic5_A Putative saccharopine d 94.7 0.023 8E-07 49.0 4.0 33 44-76 6-39 (118)
285 4gcm_A TRXR, thioredoxin reduc 94.4 0.029 9.9E-07 57.9 4.6 35 44-78 146-180 (312)
286 1gte_A Dihydropyrimidine dehyd 94.3 0.19 6.4E-06 61.0 12.2 33 44-76 333-366 (1025)
287 2hmt_A YUAA protein; RCK, KTN, 94.3 0.037 1.3E-06 49.6 4.6 33 44-76 7-39 (144)
288 1o94_A Tmadh, trimethylamine d 94.2 0.11 3.9E-06 60.4 9.8 33 44-76 529-563 (729)
289 3c85_A Putative glutathione-re 94.1 0.044 1.5E-06 51.9 5.0 34 43-76 39-73 (183)
290 3sx6_A Sulfide-quinone reducta 94.1 0.24 8.1E-06 53.8 11.4 44 190-235 224-267 (437)
291 1f0y_A HCDH, L-3-hydroxyacyl-C 94.0 0.044 1.5E-06 56.5 5.0 33 44-76 16-48 (302)
292 1ps9_A 2,4-dienoyl-COA reducta 93.9 0.15 5E-06 58.9 9.8 29 43-71 494-522 (671)
293 3l4b_C TRKA K+ channel protien 93.8 0.039 1.3E-06 53.9 4.0 34 44-77 1-34 (218)
294 1pzg_A LDH, lactate dehydrogen 93.5 0.061 2.1E-06 56.3 5.1 36 41-76 7-43 (331)
295 4a5l_A Thioredoxin reductase; 93.3 0.058 2E-06 55.4 4.6 35 44-78 153-187 (314)
296 3fg2_P Putative rubredoxin red 93.0 0.082 2.8E-06 56.8 5.4 36 44-79 143-178 (404)
297 3k96_A Glycerol-3-phosphate de 92.8 0.1 3.5E-06 55.2 5.6 36 41-76 27-62 (356)
298 1zk7_A HGII, reductase, mercur 92.7 0.091 3.1E-06 57.7 5.2 37 43-79 176-212 (467)
299 3tl2_A Malate dehydrogenase; c 92.4 0.1 3.5E-06 54.1 4.9 38 39-76 4-42 (315)
300 3i83_A 2-dehydropantoate 2-red 92.3 0.1 3.5E-06 54.2 4.7 33 44-76 3-35 (320)
301 3ghy_A Ketopantoate reductase 92.2 0.13 4.3E-06 53.9 5.3 32 44-75 4-35 (335)
302 3dfz_A SIRC, precorrin-2 dehyd 91.9 0.15 5.3E-06 49.9 5.1 35 41-75 29-63 (223)
303 1y6j_A L-lactate dehydrogenase 91.7 0.15 5.1E-06 53.0 5.1 35 42-76 6-42 (318)
304 3hn2_A 2-dehydropantoate 2-red 91.6 0.14 4.7E-06 53.0 4.7 32 44-75 3-34 (312)
305 3lk7_A UDP-N-acetylmuramoylala 91.5 0.12 4.1E-06 56.5 4.3 35 42-76 8-42 (451)
306 2x5o_A UDP-N-acetylmuramoylala 91.3 0.13 4.5E-06 56.0 4.4 35 44-78 6-40 (439)
307 1ks9_A KPA reductase;, 2-dehyd 91.3 0.17 5.7E-06 51.4 5.0 33 45-77 2-34 (291)
308 3dk9_A Grase, GR, glutathione 91.3 0.17 5.7E-06 55.7 5.2 36 43-78 187-222 (478)
309 1sez_A Protoporphyrinogen oxid 91.2 4.2 0.00014 44.5 16.6 49 189-239 256-310 (504)
310 3l9w_A Glutathione-regulated p 91.1 0.16 5.5E-06 54.8 4.7 35 43-77 4-38 (413)
311 4e12_A Diketoreductase; oxidor 91.0 0.19 6.5E-06 51.2 5.0 33 44-76 5-37 (283)
312 4g65_A TRK system potassium up 91.0 0.068 2.3E-06 58.7 1.7 34 44-77 4-37 (461)
313 4dio_A NAD(P) transhydrogenase 90.9 0.18 6.2E-06 53.8 4.8 35 43-77 190-224 (405)
314 2ew2_A 2-dehydropantoate 2-red 90.9 0.18 6.2E-06 51.8 4.7 33 44-76 4-36 (316)
315 2dpo_A L-gulonate 3-dehydrogen 90.8 0.17 5.9E-06 52.5 4.5 34 44-77 7-40 (319)
316 3g17_A Similar to 2-dehydropan 90.8 0.16 5.5E-06 52.0 4.2 33 44-76 3-35 (294)
317 2raf_A Putative dinucleotide-b 90.8 0.22 7.6E-06 48.2 5.0 35 43-77 19-53 (209)
318 3gg2_A Sugar dehydrogenase, UD 90.7 0.18 6.1E-06 55.1 4.8 34 44-77 3-36 (450)
319 2uyy_A N-PAC protein; long-cha 90.7 0.24 8.1E-06 51.2 5.5 35 43-77 30-64 (316)
320 2y0c_A BCEC, UDP-glucose dehyd 90.7 0.18 6.2E-06 55.5 4.8 35 42-76 7-41 (478)
321 1lld_A L-lactate dehydrogenase 90.6 0.19 6.7E-06 52.0 4.7 33 44-76 8-42 (319)
322 2iid_A L-amino-acid oxidase; f 90.6 2.9 9.9E-05 45.8 14.6 44 190-236 254-297 (498)
323 3pqe_A L-LDH, L-lactate dehydr 90.6 0.19 6.6E-06 52.3 4.6 35 41-75 3-39 (326)
324 1bg6_A N-(1-D-carboxylethyl)-L 90.5 0.2 6.8E-06 52.7 4.8 34 43-76 4-37 (359)
325 3g0o_A 3-hydroxyisobutyrate de 90.5 0.21 7.1E-06 51.4 4.8 34 43-76 7-40 (303)
326 2hjr_A Malate dehydrogenase; m 90.4 0.23 7.8E-06 51.8 5.0 33 44-76 15-48 (328)
327 3lad_A Dihydrolipoamide dehydr 90.3 0.21 7.1E-06 54.9 4.9 37 43-79 180-216 (476)
328 3gvi_A Malate dehydrogenase; N 90.3 0.24 8E-06 51.6 5.0 36 42-77 6-42 (324)
329 2qyt_A 2-dehydropantoate 2-red 90.1 0.16 5.5E-06 52.3 3.5 31 44-74 9-45 (317)
330 3p7m_A Malate dehydrogenase; p 90.0 0.26 9E-06 51.2 5.1 34 43-76 5-39 (321)
331 3h28_A Sulfide-quinone reducta 90.0 0.86 2.9E-05 49.2 9.5 52 159-236 204-255 (430)
332 3ado_A Lambda-crystallin; L-gu 90.0 0.23 7.8E-06 51.5 4.5 34 43-76 6-39 (319)
333 3qha_A Putative oxidoreductase 90.0 0.21 7.3E-06 51.2 4.3 36 43-78 15-50 (296)
334 3urh_A Dihydrolipoyl dehydroge 89.9 0.21 7.1E-06 55.2 4.4 103 43-237 198-300 (491)
335 2ewd_A Lactate dehydrogenase,; 89.8 0.25 8.5E-06 51.2 4.7 33 44-76 5-38 (317)
336 2xve_A Flavin-containing monoo 89.8 0.22 7.6E-06 54.6 4.5 34 44-77 198-231 (464)
337 1jw9_B Molybdopterin biosynthe 89.8 0.23 7.7E-06 49.7 4.2 35 42-76 30-65 (249)
338 2v6b_A L-LDH, L-lactate dehydr 89.8 0.25 8.6E-06 50.9 4.7 32 45-76 2-35 (304)
339 1kyq_A Met8P, siroheme biosynt 89.8 0.16 5.6E-06 51.3 3.1 35 42-76 12-46 (274)
340 3d1l_A Putative NADP oxidoredu 89.7 0.31 1E-05 48.9 5.2 34 43-76 10-44 (266)
341 3p2y_A Alanine dehydrogenase/p 89.7 0.2 6.9E-06 53.0 3.9 35 43-77 184-218 (381)
342 1t2d_A LDH-P, L-lactate dehydr 89.5 0.31 1.1E-05 50.7 5.1 33 44-76 5-38 (322)
343 2gv8_A Monooxygenase; FMO, FAD 89.4 0.29 9.8E-06 53.3 5.0 36 43-78 212-248 (447)
344 3g79_A NDP-N-acetyl-D-galactos 89.3 0.27 9.1E-06 54.0 4.6 34 44-77 19-54 (478)
345 3oj0_A Glutr, glutamyl-tRNA re 89.3 0.11 3.9E-06 46.9 1.4 34 43-76 21-54 (144)
346 4ap3_A Steroid monooxygenase; 89.3 0.26 9E-06 55.3 4.7 54 43-96 191-244 (549)
347 4huj_A Uncharacterized protein 89.2 0.21 7.3E-06 48.7 3.5 34 44-77 24-58 (220)
348 3ggo_A Prephenate dehydrogenas 89.2 0.33 1.1E-05 50.2 5.1 35 42-76 32-68 (314)
349 3eag_A UDP-N-acetylmuramate:L- 89.2 0.27 9.3E-06 51.2 4.4 34 44-77 5-39 (326)
350 3pid_A UDP-glucose 6-dehydroge 89.2 0.27 9.3E-06 53.1 4.5 35 42-77 35-69 (432)
351 1mo9_A ORF3; nucleotide bindin 89.2 0.5 1.7E-05 52.6 6.9 36 44-79 215-250 (523)
352 4a7p_A UDP-glucose dehydrogena 89.2 0.31 1.1E-05 53.0 5.0 37 42-78 7-43 (446)
353 1l7d_A Nicotinamide nucleotide 89.1 0.3 1E-05 52.1 4.8 35 43-77 172-206 (384)
354 4dll_A 2-hydroxy-3-oxopropiona 89.0 0.27 9.3E-06 51.0 4.3 35 43-77 31-65 (320)
355 3doj_A AT3G25530, dehydrogenas 89.0 0.3 1E-05 50.4 4.6 34 44-77 22-55 (310)
356 1ur5_A Malate dehydrogenase; o 89.0 0.33 1.1E-05 50.1 4.9 33 44-76 3-36 (309)
357 3k6j_A Protein F01G10.3, confi 89.0 0.49 1.7E-05 51.5 6.4 34 44-77 55-88 (460)
358 3ego_A Probable 2-dehydropanto 88.9 0.31 1E-05 50.3 4.6 32 44-76 3-34 (307)
359 3mog_A Probable 3-hydroxybutyr 88.9 0.37 1.3E-05 53.0 5.5 34 43-76 5-38 (483)
360 1x13_A NAD(P) transhydrogenase 88.9 0.29 9.8E-06 52.6 4.4 35 43-77 172-206 (401)
361 3qsg_A NAD-binding phosphogluc 88.9 0.34 1.2E-05 50.0 4.9 34 43-76 24-58 (312)
362 2vns_A Metalloreductase steap3 88.9 0.4 1.4E-05 46.6 5.1 33 44-76 29-61 (215)
363 3l6d_A Putative oxidoreductase 88.8 0.5 1.7E-05 48.6 6.1 34 43-76 9-42 (306)
364 3dfu_A Uncharacterized protein 88.7 0.11 3.9E-06 51.1 1.0 33 42-74 5-37 (232)
365 3d0o_A L-LDH 1, L-lactate dehy 88.7 0.31 1.1E-05 50.5 4.4 34 42-75 5-40 (317)
366 1guz_A Malate dehydrogenase; o 88.7 0.35 1.2E-05 49.9 4.8 32 45-76 2-35 (310)
367 1pjc_A Protein (L-alanine dehy 88.5 0.32 1.1E-05 51.5 4.4 33 44-76 168-200 (361)
368 3vtf_A UDP-glucose 6-dehydroge 88.4 0.4 1.4E-05 51.9 5.1 33 44-76 22-54 (444)
369 1mv8_A GMD, GDP-mannose 6-dehy 88.3 0.29 1E-05 53.1 4.1 32 45-76 2-33 (436)
370 1vpd_A Tartronate semialdehyde 88.2 0.32 1.1E-05 49.7 4.1 33 44-76 6-38 (299)
371 3hwr_A 2-dehydropantoate 2-red 88.1 0.38 1.3E-05 49.8 4.6 34 42-76 18-51 (318)
372 3gpi_A NAD-dependent epimerase 87.9 0.52 1.8E-05 47.5 5.5 35 44-78 4-38 (286)
373 4g6h_A Rotenone-insensitive NA 87.8 0.32 1.1E-05 53.9 4.1 36 44-79 218-267 (502)
374 2aef_A Calcium-gated potassium 87.7 0.19 6.4E-06 49.5 1.9 34 43-77 9-42 (234)
375 1oju_A MDH, malate dehydrogena 87.7 0.38 1.3E-05 49.3 4.2 33 44-76 1-35 (294)
376 3pef_A 6-phosphogluconate dehy 87.6 0.4 1.4E-05 48.8 4.3 34 44-77 2-35 (287)
377 4gx0_A TRKA domain protein; me 87.5 0.49 1.7E-05 53.2 5.5 36 44-79 349-384 (565)
378 3nep_X Malate dehydrogenase; h 87.5 0.42 1.4E-05 49.4 4.5 33 44-76 1-35 (314)
379 3ldh_A Lactate dehydrogenase; 87.5 0.59 2E-05 48.5 5.6 34 43-76 21-56 (330)
380 1zej_A HBD-9, 3-hydroxyacyl-CO 87.5 0.37 1.3E-05 49.3 4.0 39 37-76 6-44 (293)
381 2rcy_A Pyrroline carboxylate r 87.3 0.5 1.7E-05 47.2 4.9 36 43-78 4-43 (262)
382 1z82_A Glycerol-3-phosphate de 87.3 0.46 1.6E-05 49.5 4.7 36 41-76 12-47 (335)
383 2pv7_A T-protein [includes: ch 87.2 0.75 2.6E-05 47.1 6.2 34 44-77 22-56 (298)
384 3dtt_A NADP oxidoreductase; st 87.1 0.48 1.7E-05 47.0 4.5 37 41-77 17-53 (245)
385 2vdc_G Glutamate synthase [NAD 86.9 0.56 1.9E-05 51.2 5.4 36 43-78 264-300 (456)
386 3vku_A L-LDH, L-lactate dehydr 86.9 0.48 1.6E-05 49.2 4.5 35 41-75 7-43 (326)
387 1evy_A Glycerol-3-phosphate de 86.8 0.34 1.1E-05 51.2 3.4 32 45-76 17-48 (366)
388 1txg_A Glycerol-3-phosphate de 86.7 0.43 1.5E-05 49.5 4.1 30 45-74 2-31 (335)
389 3ktd_A Prephenate dehydrogenas 86.7 0.69 2.3E-05 48.4 5.6 34 43-76 8-41 (341)
390 2eez_A Alanine dehydrogenase; 86.6 0.47 1.6E-05 50.3 4.4 34 43-76 166-199 (369)
391 4ezb_A Uncharacterized conserv 86.4 0.28 9.6E-06 50.9 2.4 34 44-77 25-59 (317)
392 3kcm_A Thioredoxin family prot 86.4 5.4 0.00018 35.4 11.0 144 553-710 3-153 (154)
393 1zcj_A Peroxisomal bifunctiona 86.4 0.54 1.9E-05 51.5 4.8 34 44-77 38-71 (463)
394 3o0h_A Glutathione reductase; 86.3 0.55 1.9E-05 51.7 4.9 99 43-238 191-289 (484)
395 2i6t_A Ubiquitin-conjugating e 86.1 0.54 1.9E-05 48.3 4.4 33 44-76 15-49 (303)
396 4e21_A 6-phosphogluconate dehy 86.1 0.59 2E-05 49.3 4.8 35 42-76 21-55 (358)
397 3ius_A Uncharacterized conserv 86.1 0.45 1.5E-05 47.9 3.8 33 44-76 6-38 (286)
398 3orq_A N5-carboxyaminoimidazol 86.0 0.8 2.7E-05 48.6 5.8 36 42-77 11-46 (377)
399 1a5z_A L-lactate dehydrogenase 86.0 0.51 1.8E-05 48.9 4.2 32 45-76 2-35 (319)
400 4gwg_A 6-phosphogluconate dehy 86.0 0.72 2.5E-05 50.6 5.6 35 43-77 4-38 (484)
401 2izz_A Pyrroline-5-carboxylate 86.0 0.67 2.3E-05 48.0 5.1 35 43-77 22-60 (322)
402 3pdu_A 3-hydroxyisobutyrate de 86.0 0.47 1.6E-05 48.2 3.9 34 44-77 2-35 (287)
403 2z3y_A Lysine-specific histone 86.0 8.1 0.00028 44.1 14.7 49 187-236 409-457 (662)
404 1ldn_A L-lactate dehydrogenase 85.9 0.61 2.1E-05 48.2 4.7 33 43-75 6-40 (316)
405 1x0v_A GPD-C, GPDH-C, glycerol 85.9 0.36 1.2E-05 50.7 3.0 34 44-77 9-49 (354)
406 2zyd_A 6-phosphogluconate dehy 85.8 0.66 2.3E-05 51.0 5.2 37 40-76 12-48 (480)
407 1dlj_A UDP-glucose dehydrogena 85.8 0.47 1.6E-05 51.0 3.9 31 45-76 2-32 (402)
408 3dgh_A TRXR-1, thioredoxin red 85.7 0.55 1.9E-05 51.6 4.5 100 44-236 188-288 (483)
409 3e8x_A Putative NAD-dependent 85.7 0.55 1.9E-05 45.9 4.1 36 42-77 20-56 (236)
410 2vhw_A Alanine dehydrogenase; 85.6 0.57 1.9E-05 49.8 4.4 35 42-76 167-201 (377)
411 3h8v_A Ubiquitin-like modifier 85.6 0.63 2.1E-05 47.5 4.5 36 41-76 34-70 (292)
412 3gl3_A Putative thiol:disulfid 85.6 7.7 0.00026 34.2 11.6 139 552-707 3-149 (152)
413 2f1k_A Prephenate dehydrogenas 85.5 0.67 2.3E-05 46.7 4.7 32 45-76 2-33 (279)
414 3c24_A Putative oxidoreductase 85.5 0.75 2.6E-05 46.7 5.1 33 44-76 12-45 (286)
415 1jay_A Coenzyme F420H2:NADP+ o 85.3 0.64 2.2E-05 44.7 4.3 32 45-76 2-34 (212)
416 3tri_A Pyrroline-5-carboxylate 85.1 0.86 3E-05 46.2 5.3 34 43-76 3-39 (280)
417 3ew7_A LMO0794 protein; Q8Y8U8 85.0 0.74 2.5E-05 44.1 4.6 32 45-76 2-34 (221)
418 2a9f_A Putative malic enzyme ( 84.9 0.65 2.2E-05 49.1 4.3 35 41-75 186-221 (398)
419 2o3j_A UDP-glucose 6-dehydroge 84.7 0.56 1.9E-05 51.6 3.9 34 44-77 10-45 (481)
420 2gf2_A Hibadh, 3-hydroxyisobut 84.5 0.8 2.8E-05 46.5 4.8 32 45-76 2-33 (296)
421 1hdo_A Biliverdin IX beta redu 84.5 0.79 2.7E-05 43.3 4.5 34 44-77 4-38 (206)
422 3vps_A TUNA, NAD-dependent epi 84.5 0.94 3.2E-05 46.2 5.4 35 43-77 7-42 (321)
423 3fi9_A Malate dehydrogenase; s 84.3 0.95 3.3E-05 47.3 5.3 34 43-76 8-44 (343)
424 2q3e_A UDP-glucose 6-dehydroge 84.2 0.58 2E-05 51.3 3.8 34 44-77 6-41 (467)
425 3h8l_A NADH oxidase; membrane 84.1 2.9 9.8E-05 44.5 9.2 36 359-397 300-335 (409)
426 1pjq_A CYSG, siroheme synthase 84.1 0.75 2.6E-05 50.2 4.6 34 42-75 11-44 (457)
427 1nyt_A Shikimate 5-dehydrogena 84.0 0.94 3.2E-05 45.7 5.0 34 43-76 119-152 (271)
428 3rui_A Ubiquitin-like modifier 84.0 0.89 3E-05 47.3 4.8 36 42-77 33-69 (340)
429 3ond_A Adenosylhomocysteinase; 84.0 0.84 2.9E-05 49.8 4.8 34 42-75 264-297 (488)
430 2jsy_A Probable thiol peroxida 83.9 5 0.00017 36.4 9.7 133 552-699 18-166 (167)
431 3i6i_A Putative leucoanthocyan 83.9 0.98 3.3E-05 47.0 5.3 34 43-76 10-44 (346)
432 1vl6_A Malate oxidoreductase; 83.8 0.78 2.7E-05 48.4 4.3 35 41-75 190-225 (388)
433 3h2s_A Putative NADH-flavin re 83.8 0.86 2.9E-05 43.9 4.5 32 45-76 2-34 (224)
434 1ez4_A Lactate dehydrogenase; 83.8 0.85 2.9E-05 47.2 4.6 34 42-75 4-39 (318)
435 1b8p_A Protein (malate dehydro 83.7 0.63 2.2E-05 48.4 3.7 34 42-75 4-45 (329)
436 2h78_A Hibadh, 3-hydroxyisobut 83.6 0.73 2.5E-05 47.1 4.0 33 44-76 4-36 (302)
437 2cvz_A Dehydrogenase, 3-hydrox 83.5 0.86 2.9E-05 46.1 4.5 32 44-76 2-33 (289)
438 1yj8_A Glycerol-3-phosphate de 83.5 0.81 2.8E-05 48.5 4.5 34 44-77 22-62 (375)
439 1yqg_A Pyrroline-5-carboxylate 83.5 0.81 2.8E-05 45.6 4.2 32 45-76 2-34 (263)
440 2egg_A AROE, shikimate 5-dehyd 83.5 0.84 2.9E-05 46.7 4.4 34 43-76 141-175 (297)
441 1hyh_A L-hicdh, L-2-hydroxyiso 83.4 0.78 2.7E-05 47.2 4.2 33 44-76 2-36 (309)
442 3phh_A Shikimate dehydrogenase 83.4 1 3.4E-05 45.4 4.8 35 43-77 118-152 (269)
443 4a9w_A Monooxygenase; baeyer-v 83.4 0.7 2.4E-05 47.8 3.9 33 43-76 163-195 (357)
444 2pgd_A 6-phosphogluconate dehy 83.4 1.1 3.7E-05 49.3 5.5 33 44-76 3-35 (482)
445 3uko_A Alcohol dehydrogenase c 83.3 0.99 3.4E-05 47.8 5.1 35 43-77 194-229 (378)
446 4ffl_A PYLC; amino acid, biosy 83.3 0.92 3.1E-05 47.7 4.8 34 45-78 3-36 (363)
447 4b4o_A Epimerase family protei 83.3 0.98 3.3E-05 45.8 4.8 34 44-77 1-35 (298)
448 2f9s_A Thiol-disulfide oxidore 83.2 7.5 0.00026 34.3 10.4 140 554-709 2-147 (151)
449 3ce6_A Adenosylhomocysteinase; 83.2 0.78 2.7E-05 50.4 4.2 34 43-76 274-307 (494)
450 2g5c_A Prephenate dehydrogenas 83.2 0.96 3.3E-05 45.6 4.7 32 45-76 3-36 (281)
451 2x6t_A ADP-L-glycero-D-manno-h 83.2 1.1 3.7E-05 46.8 5.3 35 43-77 46-82 (357)
452 1np3_A Ketol-acid reductoisome 83.1 1.3 4.3E-05 46.3 5.7 33 44-76 17-49 (338)
453 4aj2_A L-lactate dehydrogenase 83.1 1 3.6E-05 46.8 4.9 34 42-75 18-53 (331)
454 2p4q_A 6-phosphogluconate dehy 83.1 1.1 3.9E-05 49.3 5.5 36 42-77 9-44 (497)
455 1zud_1 Adenylyltransferase THI 83.0 0.86 2.9E-05 45.4 4.2 35 42-76 27-62 (251)
456 3gt0_A Pyrroline-5-carboxylate 83.0 1.2 4.1E-05 44.0 5.2 33 44-76 3-39 (247)
457 3c7a_A Octopine dehydrogenase; 82.9 0.62 2.1E-05 49.9 3.3 31 44-74 3-34 (404)
458 2yzh_A Probable thiol peroxida 82.9 11 0.00036 34.4 11.5 130 553-698 22-170 (171)
459 2d4a_B Malate dehydrogenase; a 82.9 1.1 3.8E-05 46.1 5.0 32 45-76 1-33 (308)
460 3cky_A 2-hydroxymethyl glutara 82.8 0.82 2.8E-05 46.6 4.0 34 43-76 4-37 (301)
461 3gvp_A Adenosylhomocysteinase 82.8 0.86 2.9E-05 48.9 4.2 34 43-76 220-253 (435)
462 3two_A Mannitol dehydrogenase; 82.8 1 3.6E-05 47.0 4.9 34 44-77 178-211 (348)
463 2we8_A Xanthine dehydrogenase; 82.7 1.2 4E-05 47.4 5.2 37 42-78 203-239 (386)
464 2iz1_A 6-phosphogluconate dehy 82.6 1.2 4.1E-05 48.8 5.5 34 43-76 5-38 (474)
465 3u5r_E Uncharacterized protein 82.6 7.4 0.00025 37.3 10.7 143 552-706 32-193 (218)
466 3don_A Shikimate dehydrogenase 82.3 1.1 3.7E-05 45.4 4.6 71 7-77 54-152 (277)
467 3sxp_A ADP-L-glycero-D-mannohe 82.2 1.4 4.9E-05 46.0 5.8 39 39-77 6-47 (362)
468 2pzm_A Putative nucleotide sug 82.1 1.1 3.8E-05 46.2 4.8 35 43-77 20-55 (330)
469 2zqz_A L-LDH, L-lactate dehydr 82.1 1.1 3.7E-05 46.6 4.6 34 42-75 8-43 (326)
470 4gqc_A Thiol peroxidase, perox 82.0 4.5 0.00015 37.0 8.5 35 553-589 6-40 (164)
471 3v8b_A Putative dehydrogenase, 81.9 1.1 3.7E-05 45.4 4.5 34 43-76 28-62 (283)
472 4b63_A L-ornithine N5 monooxyg 81.9 10 0.00034 41.7 12.7 35 44-78 247-283 (501)
473 2x0j_A Malate dehydrogenase; o 81.8 1 3.5E-05 46.0 4.2 33 44-76 1-35 (294)
474 3d4o_A Dipicolinate synthase s 81.8 1.2 4.1E-05 45.4 4.8 35 42-76 154-188 (293)
475 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.7 1.3 4.5E-05 48.6 5.3 33 44-76 2-34 (478)
476 4id9_A Short-chain dehydrogena 81.6 1.4 4.6E-05 45.7 5.3 38 41-78 17-55 (347)
477 4e4t_A Phosphoribosylaminoimid 81.6 1.5 5E-05 47.3 5.6 36 42-77 34-69 (419)
478 3o38_A Short chain dehydrogena 81.5 1.2 4.2E-05 44.3 4.7 34 43-76 22-57 (266)
479 3q2o_A Phosphoribosylaminoimid 81.4 1.4 4.9E-05 46.7 5.4 35 43-77 14-48 (389)
480 3h5n_A MCCB protein; ubiquitin 81.3 1 3.5E-05 47.3 4.1 35 42-76 117-152 (353)
481 2hk9_A Shikimate dehydrogenase 81.2 1.2 4.1E-05 45.0 4.5 34 43-76 129-162 (275)
482 1piw_A Hypothetical zinc-type 81.2 1.1 3.6E-05 47.2 4.3 34 44-77 181-214 (360)
483 2rir_A Dipicolinate synthase, 81.1 1.3 4.4E-05 45.3 4.8 35 42-76 156-190 (300)
484 3ojo_A CAP5O; rossmann fold, c 80.9 1 3.4E-05 48.7 4.0 34 44-77 12-45 (431)
485 3u62_A Shikimate dehydrogenase 80.7 1.6 5.4E-05 43.6 5.1 70 7-77 53-143 (253)
486 3or5_A Thiol:disulfide interch 80.7 18 0.00062 32.1 12.2 143 551-710 7-161 (165)
487 1mld_A Malate dehydrogenase; o 80.6 0.99 3.4E-05 46.6 3.7 33 44-76 1-36 (314)
488 2wtb_A MFP2, fatty acid multif 80.5 1.3 4.5E-05 51.2 5.1 34 44-77 313-346 (725)
489 1psq_A Probable thiol peroxida 80.4 9.2 0.00031 34.5 10.0 112 552-680 16-143 (163)
490 1gpj_A Glutamyl-tRNA reductase 80.2 1.1 3.8E-05 48.0 4.1 34 43-76 167-201 (404)
491 2d8a_A PH0655, probable L-thre 80.2 1.6 5.6E-05 45.4 5.3 33 44-76 169-202 (348)
492 2d5c_A AROE, shikimate 5-dehyd 80.0 1.7 6E-05 43.3 5.2 32 45-76 118-149 (263)
493 4egb_A DTDP-glucose 4,6-dehydr 79.8 1 3.5E-05 46.7 3.5 36 41-76 22-60 (346)
494 1uuf_A YAHK, zinc-type alcohol 79.7 1.2 4.2E-05 47.0 4.1 33 44-76 196-228 (369)
495 3k5i_A Phosphoribosyl-aminoimi 79.5 1.4 4.7E-05 47.2 4.5 35 41-76 22-56 (403)
496 1yqd_A Sinapyl alcohol dehydro 79.4 1.3 4.4E-05 46.7 4.2 33 44-76 189-221 (366)
497 2cf5_A Atccad5, CAD, cinnamyl 79.4 1.3 4.6E-05 46.4 4.3 33 44-76 182-214 (357)
498 3dhn_A NAD-dependent epimerase 79.4 1.2 4.2E-05 42.9 3.8 35 44-78 5-40 (227)
499 3b1f_A Putative prephenate deh 79.3 1.4 4.7E-05 44.6 4.3 33 44-76 7-41 (290)
500 2dq4_A L-threonine 3-dehydroge 79.1 1.9 6.4E-05 44.9 5.3 33 44-76 166-199 (343)
No 1
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=1.9e-79 Score=700.43 Aligned_cols=524 Identities=30% Similarity=0.433 Sum_probs=426.2
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeE
Q 005134 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (712)
Q Consensus 40 ~~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~ 119 (712)
++.++||+||||||+||++|+.|+++|++|+||||++.+...+++..++++++++|+++ |+.+++.+.+.+......+.
T Consensus 2 ~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~l-Gl~~~~~~~~~~~~~~~~~~ 80 (535)
T 3ihg_A 2 NDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIG-GVADEVVRADDIRGTQGDFV 80 (535)
T ss_dssp CCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHT-TCHHHHHHSCCSSCTTSCCE
T ss_pred CCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHc-CCHHHHHhhCCCccccccee
Confidence 34569999999999999999999999999999999999999999999999999999999 99999999887766554444
Q ss_pred --eeecCCCCeeeeecCCCcc---ccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeC
Q 005134 120 --YCTSVTGPILGSVDHMQPQ---DFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMG 194 (712)
Q Consensus 120 --~~~~~~G~~l~~~~~~~~~---~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g 194 (712)
++....|..+.++...... .+. ..+|.....++|..|+++|.+.+.+.|+ +|+++
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~l~~~L~~~a~~~gv-------------------~i~~~ 140 (535)
T 3ihg_A 81 IRLAESVRGEILRTVSESFDDMVAATE-PCTPAGWAMLSQDKLEPILLAQARKHGG-------------------AIRFG 140 (535)
T ss_dssp EEEESSSSSCEEEEEESCHHHHHHTTG-GGCSCCCBCCCHHHHHHHHHHHHHHTTC-------------------EEESS
T ss_pred eeEEeccCCceeeeccccccccccccc-cCCCCcccccCHHHHHHHHHHHHHhCCC-------------------EEEeC
Confidence 5666677766533211110 011 1345557789999999999999999887 99999
Q ss_pred cEEEEEEEcCC----eEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeecCcccccc
Q 005134 195 HECVSVSATDQ----CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYL 270 (712)
Q Consensus 195 ~~v~~v~~~~~----~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~~~l~~~~ 270 (712)
++|++++++++ +|++++.+. .+ +++++|||||+|||++|.||+++|+++.+.......+.+.+.. ++....
T Consensus 141 ~~v~~i~~~~~~~~~~v~v~~~~~---~~-~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~-~~~~~~ 215 (535)
T 3ihg_A 141 TRLLSFRQHDDDAGAGVTARLAGP---DG-EYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDA-DLSGIM 215 (535)
T ss_dssp CEEEEEEEECGGGCSEEEEEEEET---TE-EEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEEC-CGGGTS
T ss_pred CEEEEEEECCCCccccEEEEEEcC---CC-eEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEec-cChhhc
Confidence 99999999998 988888742 21 4689999999999999999999999998887777777777765 555443
Q ss_pred ccCCCceEEEEeecCCeEEEEEecCCCCeEEEEEecCCCC-CCCCCCCHHHHHHHHHHHhCCCCCcceEEEeecceechh
Q 005134 271 LNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQ-QNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAE 349 (712)
Q Consensus 271 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~~~~~ 349 (712)
...+..++++++++..+++++.+. .+.|.+.+.+.+.. .....++++.+.+.+++.++.....+++.....|++...
T Consensus 216 -~~~~~~~~~~~~p~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 293 (535)
T 3ihg_A 216 -EPGTTGWYYLHHPEFKGTFGPTDR-PDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKPELVDIQGWEMAAR 293 (535)
T ss_dssp -CTTCCEEEEEECSSCEEEEEECSS-TTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCCEEEEEEEEEEEEE
T ss_pred -cCCceEEEEEECCCceEEEEEecC-CCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCceeEEEeeEeeeeEE
Confidence 234456677788887777777653 35777776654433 344567889999999999997767788888889999999
Q ss_pred hhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHHHHH
Q 005134 350 VAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (712)
Q Consensus 350 va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (712)
++++|.. |||+|+|||||.|+|++|||||+||+||++|+|||+.+++|++.+.+|++|++||+|+++.+++.|..+++
T Consensus 294 ~a~~~~~--grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~ 371 (535)
T 3ihg_A 294 IAERWRE--GRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVAAELVVAEALAIYA 371 (535)
T ss_dssp EESCSEE--TTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECcccc--CCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHHHHHHHHHHHHHhhH
Confidence 9999984 99999999999999999999999999999999999999999999999999999999999999999988876
Q ss_pred HhcccccccCCCcchhhhhHHHhhcccCCCCcHHHHHHHHHhHhhhhhhhhhhhcccCCCccchHHHHHHHHHHHcCCcc
Q 005134 430 AAMEVPSALGLDPTIANSVHQLINRVAGSVLPSVLQKALLEGIFKVGRAQLSESLLNESNPLGSSRLAKLRHIFEEGKSL 509 (712)
Q Consensus 430 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (712)
.+..... .. + ...
T Consensus 372 ~~~~~~~--------~~-------------------------------------------~----------------~~~ 384 (535)
T 3ihg_A 372 QRMAPHM--------AE-------------------------------------------V----------------WDK 384 (535)
T ss_dssp HHTCGGG--------TT-------------------------------------------T----------------SCC
T ss_pred hhccccc--------Cc-------------------------------------------c----------------ccc
Confidence 5421000 00 0 001
Q ss_pred cccccccccCccccCCccccCCCCCCCCCCCCCCCccccccCCCCCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEc
Q 005134 510 QLQFPAEDLGFRYLKGALVPDSNCEVGAPEAPTGHRRDFVPSANPGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIA 589 (712)
Q Consensus 510 ~~~~~~~~lgy~Y~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~ 589 (712)
.+++.++++||+|.+++|+.+++.. |. ....|.|+++||+|+||+||.. ++.++||+||+|. +||||++
T Consensus 385 ~~~~~~~~~~~~y~~~~~~~~~~~~------~~-~~~~~~~~~~pG~r~p~~~l~~-~~~~~~~~dl~g~---~f~ll~~ 453 (535)
T 3ihg_A 385 SVGYPETLLGFRYRSSAVLATDDDP------AR-VENPLTPSGRPGFRGPHVLVSR-HGERLSTVDLFGD---GWTLLAG 453 (535)
T ss_dssp CCCHHHHHTSBCCCSTTCCCSCCCC------CS-BCCTTSCCCCTTSBCCCCEEEE-TTEEEEGGGGCSS---SEEEEEC
T ss_pred ccccceeeeCcccCCCceecCCCCC------Cc-ccccCCCCCCCCCcCCCceeec-CCceeeHHHhcCC---ceEEEec
Confidence 1234467899999999999765421 11 1236899999999999999975 5667999999986 4999998
Q ss_pred CCccchHHHHHHHHhhhhcCCceEEEEEcCCCCcchhhhhhccccCCCCcccchhhhcccCCccchhhhhcccCCceEEE
Q 005134 590 PVEESYHLARAALKVAEDFKVPTKVCVLWPAGTTNEVEFRSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMGAILV 669 (712)
Q Consensus 590 ~~~~~~~~~~aa~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~gavLV 669 (712)
+++ ..|.+++.++++++|+|++++.|+++ +.|.+ +.|.+.+|+++.|+|||
T Consensus 454 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~d~~--------~~~~~~~~~~~~~~~lv 504 (535)
T 3ihg_A 454 ELG--ADWVAAAEAVSAELGVPVRAYRVGAG-------------------LTDPE--------SAVSERYGIGKAGASLV 504 (535)
T ss_dssp TTC--HHHHHHHHHHHHHHTCCEEEEEBTTT-------------------BBCSS--------CCHHHHHTCTTTCEEEE
T ss_pred CCc--cHHHHHHHHHHHhcCCceEEEEeCCc-------------------cccCc--------chHHHHhCCCCCceEee
Confidence 754 57999999999999999999999421 44532 68999999999999999
Q ss_pred cCCceEEEeeCCCCCCChHHHHHHHHHHhhCC
Q 005134 670 RPDDHIAWRSKSGVSGNPKLEMEMAFSAVLGI 701 (712)
Q Consensus 670 RPDg~VaWr~~~~~~~~~~~~l~~~~~~~~~~ 701 (712)
|||||||||+... ++||.++|.++|++||||
T Consensus 505 RPD~~va~r~~~~-~~~~~~~l~~~~~~~l~~ 535 (535)
T 3ihg_A 505 RPDGIVAWRTDEA-AADAAQTLEGVLRRVLDR 535 (535)
T ss_dssp CTTSBEEEEESSC-CSSHHHHHHHHHHHHTTC
T ss_pred CCCceeEEecCCC-CCCHHHHHHHHHHHHhcC
Confidence 9999999999975 889999999999999986
No 2
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=3e-69 Score=616.94 Aligned_cols=542 Identities=27% Similarity=0.384 Sum_probs=378.6
Q ss_pred ccCcCcCcccccccccCCCCccCCCCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHH
Q 005134 16 IKTFPYPYGYTQCRALSDSKTIVSNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVF 95 (712)
Q Consensus 16 ~~~~~~p~~~~~~~~~s~~~~~~~~~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeil 95 (712)
+.-++.|+..+++...+ |. .+.++||+||||||+||++|+.|+++|++|+||||++.+...+++..++++++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~-M~----~~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l 78 (549)
T 2r0c_A 4 SHHHHHHSSGLVPRGSH-MN----APIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELF 78 (549)
T ss_dssp -------------------C----CCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHH
T ss_pred cccccccccCccchhhh-cC----CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHH
Confidence 33445566666554333 11 24568999999999999999999999999999999999888999999999999999
Q ss_pred HhhhcHHHHHHhcCCCccccceeEeeecCCCCeeeeecCCCcccc-ccccCCccccccChhHHHHHHHHHHHhcCceeec
Q 005134 96 RKLDGLAEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDF-EKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICT 174 (712)
Q Consensus 96 r~l~Gl~d~l~~~~~~~~~~~~~~~~~~~~G~~l~~~~~~~~~~~-~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~ 174 (712)
+++ |+.+++.+.+.+........++....|..+..++....... .....|.....++|..|+++|.+.+.+
T Consensus 79 ~~l-Gl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~------- 150 (549)
T 2r0c_A 79 RRW-GVAKQIRTAGWPGDHPLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGE------- 150 (549)
T ss_dssp HHT-TCHHHHHTSSCCTTSBCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGG-------
T ss_pred HHc-CChHHHHhhcCCcccccceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHH-------
Confidence 999 99999998887664433345555566766554433211100 001234445789999999999998765
Q ss_pred cCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccc
Q 005134 175 SEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQ 254 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~ 254 (712)
. |+++++|+++++++++|++++.+..+|+ +++++|||||+|||++|.||+++|+++.+....+
T Consensus 151 --------------~-v~~~~~v~~~~~~~~~v~v~~~~~~~G~--~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~ 213 (549)
T 2r0c_A 151 --------------R-LRTRSRLDSFEQRDDHVRATITDLRTGA--TRAVHARYLVACDGASSPTRKALGIDAPPRHRTQ 213 (549)
T ss_dssp --------------G-EECSEEEEEEEECSSCEEEEEEETTTCC--EEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCE
T ss_pred --------------h-cccCcEEEEEEEeCCEEEEEEEECCCCC--EEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccc
Confidence 2 7899999999999999988887433353 3579999999999999999999999998877777
Q ss_pred cEEEEEeecCccccccccCCCceEEEEeecC-CeEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q 005134 255 KLVSVHFLSKDLGDYLLNERPGMLFFIFNTE-AIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWEL 333 (712)
Q Consensus 255 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~ 333 (712)
.++.+.+..+++...+ ...+...+++++++ ..+++++.+. ...|.+.++. +. + . ++++.+.+.++++++..
T Consensus 214 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~p~~~-~~~~~~~~~~-~~-~--~-~~~~~~~~~l~~~~~~~- 285 (549)
T 2r0c_A 214 VFRNILFRAPELRSLL-GERAALFFFLMLSSSLRFPLRALDG-RGLYRLTVGV-DD-A--S-KSTMDSFELVRRAVAFD- 285 (549)
T ss_dssp EEEEEEEECTTHHHHH-GGGCCSEEEEEEETTEEEEEEESSS-SSEEEEEEEC-ST-T--C-CSCCCHHHHHHHHBCSC-
T ss_pred eEEEEEEECCchHHhc-CCCCceEEEEECCCCcEEEEEEECC-CcEEEEEecC-CC-C--C-CCHHHHHHHHHHHhCCC-
Confidence 6777777654443222 12344566666776 5556666642 3567766642 11 1 1 56667788999998863
Q ss_pred CcceEEEeecceechhhhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhh
Q 005134 334 SDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETER 413 (712)
Q Consensus 334 ~~~~i~~~~~w~~~~~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eR 413 (712)
..+++.....|.+..+++++|+ .|||||+|||||.|+|++|||||+||+||+||+|||+++++|++.+.+|++|++||
T Consensus 286 ~~~~~~~~~~~~~~~~~a~~~~--~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR 363 (549)
T 2r0c_A 286 TEIEVLSDSEWHLTHRVADSFS--AGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEER 363 (549)
T ss_dssp CCCEEEEEEEEEECCEECSCSE--ETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHH
T ss_pred CceeEEEEecchhHhhhHHhhc--CCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 4567777788999889999998 49999999999999999999999999999999999999999998999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhcccccccCCCcchhhhhHHHhhcccCCCCcHHHHHHHHHhHhhhhhhhhhhhcccCCCccch
Q 005134 414 KPIAEFNTALSVQNFRAAMEVPSALGLDPTIANSVHQLINRVAGSVLPSVLQKALLEGIFKVGRAQLSESLLNESNPLGS 493 (712)
Q Consensus 414 rp~a~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 493 (712)
+|+++.+++.+..+.+.+...... + .+...++.+.
T Consensus 364 ~~~a~~~~~~s~~~~~~~~~~~~~----~-----------------------------------------~~~~~~~~~~ 398 (549)
T 2r0c_A 364 RPVAITSLEEANVNLRRTMDRELP----P-----------------------------------------GLHDDGPRGE 398 (549)
T ss_dssp HHHHHHHHHC----------CCCC----T-----------------------------------------TTTCCSHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcccccc----c-----------------------------------------cccccCcchH
Confidence 999999999887665544211000 0 0011223333
Q ss_pred HHHHHHHHHHHc-CCcccccccccccCccccCCccccCCCCCCCCCCCCCCCccccccCCCCCCCCCcceeecCCCCcce
Q 005134 494 SRLAKLRHIFEE-GKSLQLQFPAEDLGFRYLKGALVPDSNCEVGAPEAPTGHRRDFVPSANPGSRLPHMNVRVLSTEIIS 572 (712)
Q Consensus 494 ~~~~~~~~~~~~-~~~~~~~~~~~~lgy~Y~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~pG~R~PH~~l~~~~~~~~S 572 (712)
..|+.+.+.+.. .....+...+.++|++|++++|+.++.. ++. ...|.|+.+||.|+||+||.+ + +|
T Consensus 399 ~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~------~~~--~~~~~~~~~~G~r~p~~~l~~--g--~~ 466 (549)
T 2r0c_A 399 RIRAAVAEKLERSGARREFDAPGIHFGHTYRSSIVCGEPET------EVA--TGGWRPSARPGARAPHAWLTP--T--TS 466 (549)
T ss_dssp HHHHHHHHHHHHTTGGGGGSCHHHHHCCCCCSTTSCCC-----------------CCCCCCTTSBCCCCBSSS--S--CB
T ss_pred HHHHHHHHHHHhhcccccccccceEeccEeCCccccCCCCC------Ccc--ccccCCCCCCCCcCCCcEeCC--C--cC
Confidence 344444444432 1111222234578999999998833211 111 135788999999999999962 3 79
Q ss_pred eeeCCCCCcceEEEEEcCCccchHHHHHHHHhhhhcCCceEEEEEcCCCCcchhhhhhccccCCCCcccchhhhcccCCc
Q 005134 573 TLDLVSGDKVEFLLIIAPVEESYHLARAALKVAEDFKVPTKVCVLWPAGTTNEVEFRSAAELAPWKNYIDVEEVKRSSDS 652 (712)
Q Consensus 573 t~Dl~~~~~~~f~Ll~~~~~~~~~~~~aa~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 652 (712)
|+||+|. +|+||++.+ . .|..++.++++..|+++.++.++ |
T Consensus 467 l~d~~~~---~~~ll~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~-----------------------~---------- 507 (549)
T 2r0c_A 467 TLDLFGR---GFVLLSFGT-T--DGVEAVTRAFADRHVPLETVTCH-----------------------A---------- 507 (549)
T ss_dssp GGGGCSS---SEEEEEESC-C--TTHHHHHHHHHHTTCCEEEEEEC-----------------------C----------
T ss_pred HHHHcCC---ceEEEEcCC-c--hhHHHHHHHHHHhCCceEEEEec-----------------------c----------
Confidence 9999985 499999864 2 48777777888899999988872 0
Q ss_pred cchhhhhcccCCceEEEcCCceEEEeeCCCCCCChHHHHHHHHHHhhCC
Q 005134 653 LSWWRICKMTDMGAILVRPDDHIAWRSKSGVSGNPKLEMEMAFSAVLGI 701 (712)
Q Consensus 653 ~~~~~~~~~~~~gavLVRPDg~VaWr~~~~~~~~~~~~l~~~~~~~~~~ 701 (712)
..|. ++++.++||||||||||||++.. ++++ ..+|.+++|+
T Consensus 508 ~~~~---~~~~~~~~LvRPDg~Vaw~~~~~-~~~~----~~~l~~~~~~ 548 (549)
T 2r0c_A 508 PEIH---ALYERAHVLVRPDGHVAWRGDHL-PAEL----GGLVDKVRGA 548 (549)
T ss_dssp HHHH---HHHCSSEEEECTTSBEEEEESSC-CSCH----HHHHHHHTTC
T ss_pred chhh---hccCCCEEEECCCCceEEecCCC-CcCH----HHHHHHHhcc
Confidence 2344 45578999999999999999854 4554 4467777765
No 3
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=1e-60 Score=556.41 Aligned_cols=556 Identities=21% Similarity=0.272 Sum_probs=361.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHh-----CCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCcccc
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTK-----LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLW 115 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar-----~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~ 115 (712)
..++|||||||||+||++|+.|++ +|++|+||||++.+...+++..|+++++|+|+++ |+.+++.+.+.+....
T Consensus 6 ~~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~l-Gl~~~l~~~~~~~~~~ 84 (665)
T 1pn0_A 6 ESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNL-GLADKILSEANDMSTI 84 (665)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTT-TCHHHHHTTCBCCCEE
T ss_pred CCCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHC-CCHHHHHHhccccceE
Confidence 346899999999999999999999 9999999999998888999999999999999999 9999998877654321
Q ss_pred ceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCc
Q 005134 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH 195 (712)
Q Consensus 116 ~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~ 195 (712)
. .+.....|.......... .....++.....++|..|+++|++.+.+.|. ..++|++++
T Consensus 85 ~--~~~~~~~g~i~~~~~~~~---~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~----------------~~v~v~~g~ 143 (665)
T 1pn0_A 85 A--LYNPDENGHIRRTDRIPD---TLPGISRYHQVVLHQGRIERRILDSIAEISD----------------TRIKVERPL 143 (665)
T ss_dssp E--EEEECTTSCEEEEEEEES---SCTTSCSSCCEECCHHHHHHHHHHHHHHHHT----------------TSSCEECSE
T ss_pred E--EEeCCCCcceEeecccCc---ccCCCCCCeeEEeeHHHHHHHHHHHHHhcCC----------------CceEEEeCC
Confidence 1 122222233211100000 0001223345679999999999999998760 013899999
Q ss_pred EEEEEEEcC--------CeEEEEEEec---------------------------------------cCCceeeEEEEecE
Q 005134 196 ECVSVSATD--------QCINVIASFL---------------------------------------KEGKCTERNIQCNI 228 (712)
Q Consensus 196 ~v~~v~~~~--------~~v~v~v~~~---------------------------------------~~g~~~~~~i~ad~ 228 (712)
+++++++++ ++|++++... .+|+ .++++|||
T Consensus 144 ~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~--~~~i~A~~ 221 (665)
T 1pn0_A 144 IPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGE--IETVHCKY 221 (665)
T ss_dssp EEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTC--EEEEEEEE
T ss_pred EEEEEEecCcccccCCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCc--eEEEEeCE
Confidence 999999875 5788887642 1232 36899999
Q ss_pred EEeccCCCchhhcccCCCcccccccccEEEEEeec-CccccccccCCCceEEEEee-cCCeEEEEEecCCCCeEEEEEec
Q 005134 229 LIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS-KDLGDYLLNERPGMLFFIFN-TEAIGVLVAHDLKEGEFILQVPF 306 (712)
Q Consensus 229 VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~ 306 (712)
||||||++|.||+++|+++.|......+..+.... .++. ... ..+++.. +.+..++++.+. +.+.+.+.+
T Consensus 222 VVGADG~~S~VR~~lg~~~~g~~~~~~~~v~d~~~~~~~p-----~~~-~~~~~~~~~~g~~~~~P~~~--~~~r~~~~~ 293 (665)
T 1pn0_A 222 VIGCDGGHSWVRRTLGFEMIGEQTDYIWGVLDAVPASNFP-----DIR-SRCAIHSAESGSIMIIPREN--NLVRFYVQL 293 (665)
T ss_dssp EEECCCTTCHHHHHHTCCCEEEEEEEEEEEEEEEEECCCT-----TTT-SEEEEECSSSCEEEEEECST--TCEEEEEEE
T ss_pred EEeccCCCCHHHHhcCCCCCCCCccEEEEEEEEEECCCCC-----Ccc-eEEEEEeCCCceEEEEEcCC--CEEEEEEEe
Confidence 99999999999999999887765433332222211 1111 111 1222222 344444555443 334333332
Q ss_pred CCCC-----CCCCCCCHHHHHHHHHHHhCCCCCcceEE-EeecceechhhhccccccCCcEEEEccCCccCCCCCCcchh
Q 005134 307 YPPQ-----QNLEDFSPEICEKLIFKLVGWELSDIDVI-DIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMN 380 (712)
Q Consensus 307 ~~~~-----~~~~~~~~e~~~~~i~~~~g~~~~~~~i~-~~~~w~~~~~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n 380 (712)
.... ......+.+.+.+.+++.++.....++.. ....|.+..+++++|.. .|||||+|||||.|+|++|||||
T Consensus 294 ~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~~~-~gRV~L~GDAAH~~~P~~GqG~N 372 (665)
T 1pn0_A 294 QARAEKGGRVDRTKFTPEVVIANAKKIFHPYTFDVQQLDWFTAYHIGQRVTEKFSK-DERVFIAGDACHTHSPKAGQGMN 372 (665)
T ss_dssp CC----------CCCCHHHHHHHHHHHHTTSCCEEEEEEEEEEEEEEEEECSCSEE-TTTEEECGGGTEECCSTTCCHHH
T ss_pred CCccccccccCcCCCCHHHHHHHHHHHhCcccCceeeEEEEEeeeccceehhhccc-CCCEEEEECccccCCCcccCCcc
Confidence 2211 12345678888888888887432333221 22344566788999972 39999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHHHHHHhcccccccCCCcchhhhhHHHhhcccCCCC
Q 005134 381 TGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAMEVPSALGLDPTIANSVHQLINRVAGSVL 460 (712)
Q Consensus 381 ~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 460 (712)
+||+||+||+|||+.+++|++.+.+|++|+.||+|+++.++..+....+.+..-+.....
T Consensus 373 ~gi~DA~nLawkLa~vl~g~a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~~~~~~~-------------------- 432 (665)
T 1pn0_A 373 TSMMDTYNLGWKLGLVLTGRAKRDILKTYEEERQPFAQALIDFDHQFSRLFSGRPAKDVA-------------------- 432 (665)
T ss_dssp HHHHHHHHHHHHHHHHHTTCBCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCBCSSTT--------------------
T ss_pred hhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccc--------------------
Confidence 999999999999999999999999999999999999999998776554433211100000
Q ss_pred cHHHHHHHHHhHhhhhhhhhhhhcccCCCccchHHHHHHHHHHHcCCcccccccccccCccccCCccccCCCCCCCCCCC
Q 005134 461 PSVLQKALLEGIFKVGRAQLSESLLNESNPLGSSRLAKLRHIFEEGKSLQLQFPAEDLGFRYLKGALVPDSNCEVGAPEA 540 (712)
Q Consensus 461 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgy~Y~~~~v~~~~~~~~~~~~~ 540 (712)
++.+.. .+.+.+.+.... .| ...++++|..++++.++..
T Consensus 433 ----------------------------~~~~~~-~~~~~~~~~~~~----~~-~~g~~~~Y~~s~l~~~~~~------- 471 (665)
T 1pn0_A 433 ----------------------------DEMGVS-MDVFKEAFVKGN----EF-ASGTAINYDENLVTDKKSS------- 471 (665)
T ss_dssp ----------------------------CTTSBC-HHHHHHHHHHHH----HH-HTTCCCCCCSBTTBCSTTC-------
T ss_pred ----------------------------cccchh-HHHHHHHHHHhh----cc-ccccCcccCCCcccCCCcc-------
Confidence 000000 011111111100 01 1248899999998754211
Q ss_pred CCCCccccccCCCCCCCCCcceeecC-CCCcceeeeCCCCCcceEEEEEcCCcc-chHHHHHHHHhhhhcC---------
Q 005134 541 PTGHRRDFVPSANPGSRLPHMNVRVL-STEIISTLDLVSGDKVEFLLIIAPVEE-SYHLARAALKVAEDFK--------- 609 (712)
Q Consensus 541 ~~~~~~~~~p~~~pG~R~PH~~l~~~-~~~~~St~Dl~~~~~~~f~Ll~~~~~~-~~~~~~aa~~~~~~~g--------- 609 (712)
...+.++.+||.|+||+||.+. ++..++|+|+++.+ +.|+||++.+.. ...|..++.++++.++
T Consensus 472 ----~~~~~~~~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~-g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 546 (665)
T 1pn0_A 472 ----KQELAKNCVVGTRFKSQPVVRHSEGLWMHFGDRLVTD-GRFRIIVFAGKATDATQMSRIKKFAAYLDSENSVISRY 546 (665)
T ss_dssp ----CGGGBTTSCTTSBCCCCEEEETTTTEEEEGGGGCCCS-SCEEEEEEEECTTSHHHHHHHHHHHHHHHSTTSHHHHH
T ss_pred ----ccccCCCCCCcCCCCCCeEEecCCCcEEEHhHhhccC-CCEEEEEecCCcccchhHHHHHHHHHHhhccccHHhhc
Confidence 1235677899999999999752 45678999999632 249988875432 1248888877777653
Q ss_pred --------CceEEEEEcCCCCc-chhhhhhcc-cc----CCCCcccchhhhcccCCccchhhhhcccC-Cce-EEEcCCc
Q 005134 610 --------VPTKVCVLWPAGTT-NEVEFRSAA-EL----APWKNYIDVEEVKRSSDSLSWWRICKMTD-MGA-ILVRPDD 673 (712)
Q Consensus 610 --------~~~~~~~~~~~~~~-~~~~~~~~~-~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~ga-vLVRPDg 673 (712)
..++++.|.+.... .+-.+ -.. .. +.|+.|.|... . ....+.|++.+|+.+ .|+ |||||||
T Consensus 547 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~d~~~-~-~~~~~~~~~~~g~~~~~g~~vlvRPD~ 623 (665)
T 1pn0_A 547 TPKGADRNSRIDVITIHSCHRDDIEMHD-FPAPALHPKWQYDFIYADCDS-W-HHPHPKSYQAWGVDETKGAVVVVRPDG 623 (665)
T ss_dssp SBTTSCTTSSEEEEEEESSCTTSCCGGG-SCTTTTSCTTCCSSEEECSCC-S-SSCCCCHHHHHTBCTTTCEEEEECTTS
T ss_pred CCcccCccceeEEEEEecCCCCccchhh-CCHHHcCcccchheEeecCcc-c-ccccccHHHHcCCCCCCceEEEECCCC
Confidence 35888888433111 00000 000 11 11233444110 0 001257999999987 566 8999999
Q ss_pred eEEEeeCCCCCCChHHHHHHHHHHhhCCC
Q 005134 674 HIAWRSKSGVSGNPKLEMEMAFSAVLGIK 702 (712)
Q Consensus 674 ~VaWr~~~~~~~~~~~~l~~~~~~~~~~~ 702 (712)
|||||+. . +..++|...|..++...
T Consensus 624 yV~~~~~-~---~~~~~l~~~~~~~~~~~ 648 (665)
T 1pn0_A 624 YTSLVTD-L---EGTAEIDRYFSGILVEP 648 (665)
T ss_dssp BEEEEEC-T---TTHHHHHHHHHTTBCCC
T ss_pred cEEEEec-c---ccHHHHHHHHHHHhcCc
Confidence 9999986 2 23578999999988653
No 4
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=1.4e-60 Score=538.52 Aligned_cols=486 Identities=22% Similarity=0.249 Sum_probs=332.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
++++||+||||||+||++|+.|+++|++|+||||++.+...+++..++++++++|+++ |+.+++.+. .+. ....+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~l-Gl~~~~~~~-~~~---~~~~~ 84 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQR-GILPAFGPV-ETS---TQGHF 84 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHT-TCGGGGCSC-CEE---SEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHC-CCHHHHHhc-ccc---cccee
Confidence 4568999999999999999999999999999999999988899999999999999999 998887654 221 11111
Q ss_pred eecCCCCeeeeecCCCccccccccCCc-cccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPV-SVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~-~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
.+.. ++. .....+. ....++|..|+++|.+.+.+.|+ +|+++++|++
T Consensus 85 ----~~~~---~~~------~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv-------------------~v~~~~~v~~ 132 (499)
T 2qa2_A 85 ----GGRP---VDF------GVLEGAHYGVKAVPQSTTESVLEEWALGRGA-------------------ELLRGHTVRA 132 (499)
T ss_dssp ----TTEE---EEG------GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTC-------------------EEEESCEEEE
T ss_pred ----ccee---ccc------ccCCCCCCceEecCHHHHHHHHHHHHHhCCC-------------------EEEcCCEEEE
Confidence 1111 111 0001111 23678999999999999998887 9999999999
Q ss_pred EEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeecCccccccccCCCceEE
Q 005134 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (712)
Q Consensus 200 v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (712)
+++++++|++++.+ +++ +++++|||||+|||++|.||+++|+++.+......++...+...+ .+...+
T Consensus 133 i~~~~~~v~v~~~~---~~g-~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~--------~~~~~~ 200 (499)
T 2qa2_A 133 LTDEGDHVVVEVEG---PDG-PRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCE--------ITPRPI 200 (499)
T ss_dssp EEECSSCEEEEEEC---SSC-EEEEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCC--------CCCEEE
T ss_pred EEEeCCEEEEEEEc---CCC-cEEEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECC--------CCcceE
Confidence 99999999888763 322 367999999999999999999999998876655555555443321 112234
Q ss_pred EEeecCCeEEEEEecCCCCeEEEEEecCCC--CCCCCCCCHHHHHHHHHHHhCCCCCcceEEEeecceechhhhcccccc
Q 005134 280 FIFNTEAIGVLVAHDLKEGEFILQVPFYPP--QQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCC 357 (712)
Q Consensus 280 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~~~~~va~~~~~~ 357 (712)
+.+.++...++++.+ ++.|.+.+..... .......+.+.+.+.+++.++......++.....|....+++++|+
T Consensus 201 ~~~~~~g~~~~~P~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-- 276 (499)
T 2qa2_A 201 GETVPLGMVMSAPLG--DGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDISHGEPVWVSAFGDPARQVSAYR-- 276 (499)
T ss_dssp EEEETTEEEEEEECS--SSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHHHSCCCTTCEEEEEEEECCCEEECSCSE--
T ss_pred EEECCCeEEEEEEcC--CCEEEEEEEecCCCCccccCCCCHHHHHHHHHHHhCCCCCccceeEEEEEeCCcEEccccc--
Confidence 556666544555543 3444444332121 1222456788888999998885433234444456777788899998
Q ss_pred CCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHHHHHHhcccccc
Q 005134 358 YNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAMEVPSA 437 (712)
Q Consensus 358 ~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~~~~~~~~~ 437 (712)
.|||||+|||||.|+|++|||||+||+||+||+|||+++++|++.+.+|++|++||+|+++.++..+......+..
T Consensus 277 ~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~---- 352 (499)
T 2qa2_A 277 RGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS---- 352 (499)
T ss_dssp ETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred CCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 4999999999999999999999999999999999999999999889999999999999999999887654443321
Q ss_pred cCCCcchhhhhHHHhhcccCCCCcHHHHHHHHHhHhhhhhhhhhhhcccCCCccchHHHHHHHHHHHcCCcccccccccc
Q 005134 438 LGLDPTIANSVHQLINRVAGSVLPSVLQKALLEGIFKVGRAQLSESLLNESNPLGSSRLAKLRHIFEEGKSLQLQFPAED 517 (712)
Q Consensus 438 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (712)
++. .. .++..++ . .+ ..|.. +..+...+ ..
T Consensus 353 ---~~~-~~----------------~~R~~~~-~-----------~~---~~~~~---~~~~~~~~------------~~ 382 (499)
T 2qa2_A 353 ---GDE-MQ----------------PLRDVLS-E-----------LI---RYDEV---SRHLAGMV------------SG 382 (499)
T ss_dssp ---CGG-GH----------------HHHHHHH-H-----------HH---TSSHH---HHHHHHHH------------HT
T ss_pred ---Cch-HH----------------HHHHHHH-H-----------hh---cCHHH---HHHHHHHH------------hC
Confidence 000 00 0111000 0 00 01111 01111111 13
Q ss_pred cCccccCCccccCCCCCCCCCCCCCCCccccccCCCCCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEcCCccchHH
Q 005134 518 LGFRYLKGALVPDSNCEVGAPEAPTGHRRDFVPSANPGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIAPVEESYHL 597 (712)
Q Consensus 518 lgy~Y~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~~~~~~~~~ 597 (712)
++++|.++. + +...||.|+||+||.. +++.+||+||++.+ .|+||++.+. ..|
T Consensus 383 ~~~~Y~~~~----~------------------~~~~~G~r~p~~~l~~-~~~~~~l~d~~~~~--~~~ll~~~~~--~~~ 435 (499)
T 2qa2_A 383 LDIRYEVDG----G------------------DHPLLGMRMPHQELVR-AHGKTSTTELLHPA--RGVLLDIADD--AEV 435 (499)
T ss_dssp TTCCCCCCS----C------------------SCTTTTSBCCCCEEEC-SSSEEETTGGGTTC--SEEEEECSCC--HHH
T ss_pred CCCccCCCC----C------------------CCCCCCCCCCCCeeec-CCCceeHHHHhcCC--eEEEEEecCc--ccc
Confidence 688997631 0 0125899999999975 44468999999765 4999998642 233
Q ss_pred HHHHHHhhhhcCCceEEEEEcCCCCcchhhhhhccccCCCCcccchhhhcccCCccchhhhhcccCCceEEEcCCceEEE
Q 005134 598 ARAALKVAEDFKVPTKVCVLWPAGTTNEVEFRSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMGAILVRPDDHIAW 677 (712)
Q Consensus 598 ~~aa~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~gavLVRPDg~VaW 677 (712)
.. ++....-.++++... + .+ ...| +++.+.++|||||||||||
T Consensus 436 ~~----~~~~~~~~~~~~~~~------------------~---~~---------~~~~---~~~~~~~~~LvRPDg~vaw 478 (499)
T 2qa2_A 436 RE----AATGWSDRVDIVTAS------------------L---HD---------APPQ---GPLSDARAVLVRPDGYVAW 478 (499)
T ss_dssp HH----HTGGGTTTEEEEECE------------------E---SS---------CCSS---STTTTCSEEEECTTSBEEE
T ss_pred hh----hhhcccccEEEecCc------------------c---cc---------cccc---cccCCCcEEEECCCCEEEE
Confidence 22 111111123322210 0 00 0123 3567789999999999999
Q ss_pred eeCCCCCCChHHHHHHHHHHhhCCC
Q 005134 678 RSKSGVSGNPKLEMEMAFSAVLGIK 702 (712)
Q Consensus 678 r~~~~~~~~~~~~l~~~~~~~~~~~ 702 (712)
|++.. . +.|.++|.+++|..
T Consensus 479 ~~~~~--~---~~l~~~l~~~~~~~ 498 (499)
T 2qa2_A 479 ISPGS--R---AGLTEALDRWFGPA 498 (499)
T ss_dssp EESSC--S---SCHHHHHHHHHCSC
T ss_pred EeCCc--h---HHHHHHHHHhhCCC
Confidence 98742 2 35899999998854
No 5
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=2.1e-60 Score=537.21 Aligned_cols=486 Identities=21% Similarity=0.260 Sum_probs=332.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
++++||+||||||+||++|+.|+++|++|+||||++.+...+++..++++++++|+++ |+.+++.+. .+. ....+
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~l-Gl~~~~~~~-~~~---~~~~~ 83 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQR-GILPRFGEV-ETS---TQGHF 83 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTT-TCGGGGCSC-CBC---CEEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHC-CCHHHHHhc-ccc---ccccc
Confidence 4669999999999999999999999999999999999888899999999999999999 998887654 221 11111
Q ss_pred eecCCCCeeeeecCCCccccccccCCc-cccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPV-SVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~-~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
.+.. ++.. .. ..+. ....++|..|+++|.+.+.+.|+ +|+++++|++
T Consensus 84 ----~~~~---~~~~---~~---~~~~~~~~~i~~~~l~~~L~~~~~~~gv-------------------~v~~~~~v~~ 131 (500)
T 2qa1_A 84 ----GGLP---IDFG---VL---EGAWQAAKTVPQSVTETHLEQWATGLGA-------------------DIRRGHEVLS 131 (500)
T ss_dssp ----TTEE---EEGG---GS---TTGGGCEEEEEHHHHHHHHHHHHHHTTC-------------------EEEETCEEEE
T ss_pred ----ccee---cccc---cC---CCCCCceeecCHHHHHHHHHHHHHHCCC-------------------EEECCcEEEE
Confidence 1111 1110 00 1111 23678999999999999998887 9999999999
Q ss_pred EEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeecCccccccccCCCceEE
Q 005134 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (712)
Q Consensus 200 v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (712)
+++++++|++++.+ +++ +++++|||||+|||++|.||+++|+++.+......++...+...+ .+...+
T Consensus 132 i~~~~~~v~v~~~~---~~g-~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 199 (500)
T 2qa1_A 132 LTDDGAGVTVEVRG---PEG-KHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE--------LQPRMI 199 (500)
T ss_dssp EEEETTEEEEEEEE---TTE-EEEEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCC--------CCCEEE
T ss_pred EEEcCCeEEEEEEc---CCC-CEEEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCC--------CCCceE
Confidence 99999999888763 322 367999999999999999999999998876655555554443221 122234
Q ss_pred EEeecCCeEEEEEecCCCCeEEEEEecCCC--CCCCCCCCHHHHHHHHHHHhCCCCCcceEEEeecceechhhhcccccc
Q 005134 280 FIFNTEAIGVLVAHDLKEGEFILQVPFYPP--QQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCC 357 (712)
Q Consensus 280 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~~~~~va~~~~~~ 357 (712)
+.+.++...++++.+ ++.|.+.+..... .......+.+.+.+.+++.++......++.....|....+++++|+.
T Consensus 200 ~~~~~~g~~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~- 276 (500)
T 2qa1_A 200 GETLPGGMVMVGPLP--GGITRIIVCERGTPPQRRETPPSWHEVADAWKRLTGDDIAHAEPVWVSAFGNATRQVTEYRR- 276 (500)
T ss_dssp EEEETTEEEEEEEET--TTEEEEEEEETTCCC-----CCCHHHHHHHHHHHHSCCCTTSEEEEEEEEECCEEECSCSEE-
T ss_pred EEECCCcEEEEEEcC--CCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHhcCCCCCccceeEEEEeccCcEEcccccc-
Confidence 556666555555554 3445444332121 11223467888889999988854332344444568777888999984
Q ss_pred CCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHHHHHHhcccccc
Q 005134 358 YNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAMEVPSA 437 (712)
Q Consensus 358 ~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~~~~~~~~~ 437 (712)
|||||+|||||.|+|++|||||+||+||+||+|||+++++|++.+.+|++|++||+|+++.++..+......+..
T Consensus 277 -grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~---- 351 (500)
T 2qa1_A 277 -GRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS---- 351 (500)
T ss_dssp -TTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS----
T ss_pred -CCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999999999999999899999999999999999999887654433311
Q ss_pred cCCCcchhhhhHHHhhcccCCCCcHHHHHHHHHhHhhhhhhhhhhhcccCCCccchHHHHHHHHHHHcCCcccccccccc
Q 005134 438 LGLDPTIANSVHQLINRVAGSVLPSVLQKALLEGIFKVGRAQLSESLLNESNPLGSSRLAKLRHIFEEGKSLQLQFPAED 517 (712)
Q Consensus 438 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (712)
++. .. .++..++ . .+ ..|.. +..+...+ ..
T Consensus 352 ---~~~-~~----------------~~R~~~~-~-----------~~---~~~~~---~~~~~~~~------------~g 381 (500)
T 2qa1_A 352 ---GPE-VQ----------------PLRDVLT-E-----------LI---QYGEV---ARHLAGMV------------SG 381 (500)
T ss_dssp ---CGG-GH----------------HHHHHHH-H-----------HH---TSHHH---HHHHHHHH------------HS
T ss_pred ---Cch-HH----------------HHHHHHH-H-----------hh---cCHHH---HHHHhhhh------------cc
Confidence 000 00 0111000 0 00 01100 01111111 13
Q ss_pred cCccccCCccccCCCCCCCCCCCCCCCccccccCCCCCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEcCCccchHH
Q 005134 518 LGFRYLKGALVPDSNCEVGAPEAPTGHRRDFVPSANPGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIAPVEESYHL 597 (712)
Q Consensus 518 lgy~Y~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~~~~~~~~~ 597 (712)
++++|.++. . +...||.|+||+||.. +++.+||+||++.+ .|+||++.+. ..|
T Consensus 382 ~~~~Y~~~~----~------------------~~~~~G~r~p~~~l~~-~~~~~~l~d~~~~~--~~~ll~~~~~--~~~ 434 (500)
T 2qa1_A 382 LEITYDVGT----G------------------SHPLLGKRMPALELTT-ATRETSSTELLHTA--RGVLLDLADN--PRL 434 (500)
T ss_dssp TTCCCCCCC----C------------------SCTTTTSBCCCCEEEC-SSCEEEHHHHTTTC--CEEEEETTCC--HHH
T ss_pred CCCccCCCC----C------------------cCCcCCCCCCCCeeec-CCCcEeHHHHhCCC--eEEEEEeCCc--ccc
Confidence 688897631 0 0125899999999975 44468999999765 4999998642 234
Q ss_pred HHHHHHhhhhcCCceEEEEEcCCCCcchhhhhhccccCCCCcccchhhhcccCCccchhhhhcccCCceEEEcCCceEEE
Q 005134 598 ARAALKVAEDFKVPTKVCVLWPAGTTNEVEFRSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMGAILVRPDDHIAW 677 (712)
Q Consensus 598 ~~aa~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~gavLVRPDg~VaW 677 (712)
... +....-.++++... + .+ ...| +++.+.++|||||||||||
T Consensus 435 ~~~----~~~~~~~~~~~~~~------------------~---~~---------~~~~---~~~~~~~~~LvRPDg~vaw 477 (500)
T 2qa1_A 435 RAR----AAAWSDRVDIVTAV------------------P---GE---------VSAT---SGLRDTTAVLIRPDGHVAW 477 (500)
T ss_dssp HHH----HGGGTTTEEEEECE------------------E---CC---------CCTT---SSCTTCCEEEECTTSBEEE
T ss_pred hhh----hhccccceEEecCc------------------c---cc---------cccc---cccCCCcEEEECCCcEEEE
Confidence 321 11111123322210 0 00 0123 4567789999999999999
Q ss_pred eeCCCCCCChHHHHHHHHHHhhCCC
Q 005134 678 RSKSGVSGNPKLEMEMAFSAVLGIK 702 (712)
Q Consensus 678 r~~~~~~~~~~~~l~~~~~~~~~~~ 702 (712)
|++.. . ..|.++|.+++|..
T Consensus 478 ~~~~~--~---~~l~~~l~~~~~~~ 497 (500)
T 2qa1_A 478 AAPGS--H---HDLPMALERWFGAP 497 (500)
T ss_dssp EESSC--S---SCHHHHHHHHHCSC
T ss_pred EeCCc--h---HHHHHHHHHHhCCC
Confidence 98742 2 35899999999975
No 6
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=7e-58 Score=531.62 Aligned_cols=547 Identities=20% Similarity=0.255 Sum_probs=341.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHh-CCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar-~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
.++||+||||||+||++|+.|++ +|++|+||||++.+...+++..++++++++|+++ |+.+++.+.+.+... ..+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~l-Gl~~~~~~~~~~~~~---~~~ 106 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAF-EFADSILKEACWIND---VTF 106 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHT-TCHHHHHHHSEEECE---EEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHc-CcHHHHHHhcccccc---eEE
Confidence 46899999999999999999999 9999999999999988999999999999999999 999999887654422 122
Q ss_pred eec-C--CCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEE
Q 005134 121 CTS-V--TGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHEC 197 (712)
Q Consensus 121 ~~~-~--~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v 197 (712)
... . .|.... ...... .....++.....++|..|+++|.+.+.+.|+ +++|+++++|
T Consensus 107 ~~~~~~~~g~~~~-~~~~~~--~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~-----------------~v~v~~~~~v 166 (639)
T 2dkh_A 107 WKPDPGQPGRIAR-HGRVQD--TEDGLSEFPHVILNQARVHDHYLERMRNSPS-----------------RLEPHYARRV 166 (639)
T ss_dssp EEECTTSTTCEEE-EEEEES--SCTTSCSSCEEECCHHHHHHHHHHHHHHSTT-----------------CCCCBCSEEE
T ss_pred ECCCCCCCcceEe-ecccCc--ccCCCCCCceEeeCHHHHHHHHHHHHHhCCC-----------------CcEEecCCEE
Confidence 211 1 232211 100000 0001123334678999999999999998863 1389999999
Q ss_pred EEEEEcCC----eEEEEEEec---cCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeec-Cccccc
Q 005134 198 VSVSATDQ----CINVIASFL---KEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS-KDLGDY 269 (712)
Q Consensus 198 ~~v~~~~~----~v~v~v~~~---~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~-~~l~~~ 269 (712)
++++++++ +|++++... .+|+ .++++|||||+|||++|.||+++|+++.|......+..+.... .++..
T Consensus 167 ~~l~~~~~~~~~~v~v~~~~~~~~~~G~--~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~- 243 (639)
T 2dkh_A 167 LDVKVDHGAADYPVTVTLERCDAAHAGQ--IETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPD- 243 (639)
T ss_dssp EEEEECTTCSSCCEEEEEEECSGGGTTC--EEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTT-
T ss_pred EEEEECCCCCcCCEEEEEEeccccCCCC--eEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCc-
Confidence 99998864 688877641 1342 3589999999999999999999999888766544433332211 11111
Q ss_pred cccCCCceEEEEeecCCeEEEEEecCCCCeEEEEEecCC--CC--CCCCCCCHHHHHHHHHHHhCCCCCcceE-EEeecc
Q 005134 270 LLNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYP--PQ--QNLEDFSPEICEKLIFKLVGWELSDIDV-IDIKPW 344 (712)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~e~~~~~i~~~~g~~~~~~~i-~~~~~w 344 (712)
.. .. +.+..+.+..++++.+.+ ..+.+.+.... .. ......+.+.+.+.+++.++.....+.. .....|
T Consensus 244 ---~~-~~-~~~~~~~g~~~~~P~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (639)
T 2dkh_A 244 ---VR-YK-VAIQSEQGNVLIIPREGG-HLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKLEVKNVPWWSVY 317 (639)
T ss_dssp ---TT-SE-EEEEETTEEEEEEECTTS-SCEEEEEECC-----------CCCHHHHHHHHHHHHTTSCEEEEEEEEEEEE
T ss_pred ---cc-ee-EEEEcCCceEEEEEcCCC-cEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccCcceeeeEEEec
Confidence 11 11 222224433344444322 13433332222 11 1223467788888888888742222221 122345
Q ss_pred eechhhhccccc----------cCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhh
Q 005134 345 VMHAEVAEKFLC----------CYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERK 414 (712)
Q Consensus 345 ~~~~~va~~~~~----------~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRr 414 (712)
.+..+++++|+. ..|||||+|||||.|+|++|||||+||+||+||+|||+++++|++.+.+|++|++||+
T Consensus 318 ~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~eR~ 397 (639)
T 2dkh_A 318 EIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSSERQ 397 (639)
T ss_dssp CCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHHHHH
T ss_pred ccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 556678888870 1499999999999999999999999999999999999999999989999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccCCCcchhhhhHHHhhcccCCCCcHHHHHHHHHhHhhhhhhhhhhhcccCCCccchH
Q 005134 415 PIAEFNTALSVQNFRAAMEVPSALGLDPTIANSVHQLINRVAGSVLPSVLQKALLEGIFKVGRAQLSESLLNESNPLGSS 494 (712)
Q Consensus 415 p~a~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 494 (712)
|+++.+++.+....+.+.. .+..... . +.
T Consensus 398 ~~a~~~~~~s~~~~~~~~~-------~~~~~~~--------------~-----------------------------~~- 426 (639)
T 2dkh_A 398 VVAQQLIDFDREWAKMFSD-------PAKEGGQ--------------G-----------------------------GV- 426 (639)
T ss_dssp HHHHHHHHHHHHSCC-----------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcC-------CCccccc--------------c-----------------------------cc-
Confidence 9999988876432211100 0000000 0 00
Q ss_pred HHHHHHHHHHcCCcccccccccccCccccCCccccCCCCCCCCCCCCCCCccccccCCCCCCCCCcceeecC-CCCccee
Q 005134 495 RLAKLRHIFEEGKSLQLQFPAEDLGFRYLKGALVPDSNCEVGAPEAPTGHRRDFVPSANPGSRLPHMNVRVL-STEIIST 573 (712)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~lgy~Y~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~pG~R~PH~~l~~~-~~~~~St 573 (712)
....+.+.+.... .| ...+|++|.+++|+.+++. ..+.+..+||.|+||+||.+. ++..++|
T Consensus 427 ~~~~~~~~~~~~~----~~-~~g~~~~Y~~s~l~~~~~~------------~~~~~~~~~G~r~p~~~~~~~~~g~~~~l 489 (639)
T 2dkh_A 427 DPKEFQKYFEQHG----RF-TAGVGTHYAPSLLTGQAKH------------QALASGFTVGMRFHSAPVVRVCDAKPVQL 489 (639)
T ss_dssp CHHHHHHHHHHHH----HH-HTTCCCCCCSSSSSCCCTT------------GGGBTTSCTTSBCCCCEEEETTTCCEEEG
T ss_pred cHHHHHHHHHHhc----cc-cccCCcccCCCCccCCCCc------------cccCCCCCCcCCCCCCeEEecCCCCEEEH
Confidence 0001111111000 01 1248999999998754311 124556789999999999752 5667899
Q ss_pred eeCCCCCcceEEEEEcCCccchHHH-HHHHHhhhhc------------------CCceEEEEEcCCCCc-chhhhhhccc
Q 005134 574 LDLVSGDKVEFLLIIAPVEESYHLA-RAALKVAEDF------------------KVPTKVCVLWPAGTT-NEVEFRSAAE 633 (712)
Q Consensus 574 ~Dl~~~~~~~f~Ll~~~~~~~~~~~-~aa~~~~~~~------------------g~~~~~~~~~~~~~~-~~~~~~~~~~ 633 (712)
+|+++.+ +.|+||++.+.....|. .++.++++.+ +-.++++.|.+.... .+-.+ -...
T Consensus 490 ~~~~~~~-g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~p~~ 567 (639)
T 2dkh_A 490 GHCGKAD-GRWRLYAFAAQNDLAQPESGLLALCRFLEGDAASPLRRFTPAGQDIDSIFDLRAVFPQAYTEVALET-LPAL 567 (639)
T ss_dssp GGGCCSS-SCEEEEEECCTTTTTCTTSHHHHHHHHHHHCTTCHHHHHSCTTSCTTSSEEEEEECSSCGGGCCGGG-SCGG
T ss_pred HHhhccC-CCEEEEEecCCCCchhhHHHHHHHHHHHhhCCccHHHhcCCCCCCcCceEEEEEEecCCCCccchhh-CcHh
Confidence 9999632 24999998643211122 2222333222 124777777433110 00000 0000
Q ss_pred c----------CCCCcccchhhhcccCCccchhhhhcccC-Cce-EEEcCCceEEEeeCCCCCCChHHHHHHHHHHhh
Q 005134 634 L----------APWKNYIDVEEVKRSSDSLSWWRICKMTD-MGA-ILVRPDDHIAWRSKSGVSGNPKLEMEMAFSAVL 699 (712)
Q Consensus 634 ~----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~ga-vLVRPDg~VaWr~~~~~~~~~~~~l~~~~~~~~ 699 (712)
. +.|..|.|.. ..+.+.|++.+|+.+ .|+ |||||||||||+... ++ .+.|...|..++
T Consensus 568 ~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~g~~~~~g~~v~vRPD~yv~~~~~~---~~-~~~l~~~~~~~~ 637 (639)
T 2dkh_A 568 LLPPKGQLGMIDYEKVFSPDL----KNAGQDIFELRGIDRQQGALVVVRPDQYVAQVLPL---GD-HAALSAYFESFM 637 (639)
T ss_dssp GSCEETTTTEECCCSEEECCC----SSTTCCHHHHTTBCTTTCEEEEECTTSBEEEEECT---TC-HHHHHHHHHTTB
T ss_pred hCCcccccccccceeEEeCCC----cccccchHHHhCCCCCceEEEEECCCCceEEeech---hh-HHHHHHHHHHHh
Confidence 0 1123344410 000146888999987 355 899999999999762 23 466788777654
No 7
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=5.1e-54 Score=491.47 Aligned_cols=496 Identities=22% Similarity=0.287 Sum_probs=323.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
.+++||+||||||+||++|+.|+++|++|+||||.+.+...+++..|+++++++|+++ |+.+++.+.+...... .
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~l-Gl~~~l~~~~~~~~~~---~- 121 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLR-GLLDRFLEGTQVAKGL---P- 121 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTT-TCHHHHTTSCCBCSBC---C-
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHc-CChHHHHhcCcccCCc---e-
Confidence 4568999999999999999999999999999999999988999999999999999999 9999998876543210 0
Q ss_pred eecCCCCeeeeecCCCccccccccCCc-cccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPV-SVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~-~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
..+.....++ +.....+. ..+.++|..|++.|.+.+.+.|+ +|+++++|++
T Consensus 122 ---~~~~~~~~~~------~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv-------------------~i~~~~~v~~ 173 (570)
T 3fmw_A 122 ---FAGIFTQGLD------FGLVDTRHPYTGLVPQSRTEALLAEHAREAGA-------------------EIPRGHEVTR 173 (570)
T ss_dssp ---BTTBCTTCCB------GGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTE-------------------ECCBSCEEEE
T ss_pred ---eCCccccccc------ccccCCCCCeeEEeCHHHHHHHHHHHHHhCCC-------------------EEEeCCEEEE
Confidence 0111000011 11001111 24578999999999999998886 9999999999
Q ss_pred EEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeecCccccccccCCCceEE
Q 005134 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (712)
Q Consensus 200 v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (712)
+++++++|++++... +| +++++|||||+|||++|.||+.+|+++.+..+....+...+...... .. ..
T Consensus 174 l~~~~~~v~v~~~~~-~G---~~~~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~------~~--~~ 241 (570)
T 3fmw_A 174 LRQDAEAVEVTVAGP-SG---PYPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE------VP--RR 241 (570)
T ss_dssp CCBCSSCEEEEEEET-TE---EEEEEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS------SC--CC
T ss_pred EEEcCCeEEEEEEeC-CC---cEEEEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC------cc--eE
Confidence 999999998887632 33 14799999999999999999999999988776665555544332111 00 11
Q ss_pred EEeecCCeEEE-EEecCCCC-eEEEEEecCCCCCCCCCCCHHHHHHHHHHHhCCCCCcceEE-Eeecceechhhhccccc
Q 005134 280 FIFNTEAIGVL-VAHDLKEG-EFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVI-DIKPWVMHAEVAEKFLC 356 (712)
Q Consensus 280 ~~~~~~~~g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~-~~~~w~~~~~va~~~~~ 356 (712)
+.+.+.+..++ ++.+.+.. ++++..+..+........+.+.+.+.+++.++......+.. ....|++..+.+++|+.
T Consensus 242 ~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 321 (570)
T 3fmw_A 242 WERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVRGTPLTLTEPVSWLSRFGDASRQAKRYRS 321 (570)
T ss_dssp CCCCCSSCEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSSSCCCCCCSCCEEEEEECCCCEECSCSEE
T ss_pred EEecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHhhcccccceeeeeeEEeeccccccccccc
Confidence 12233332222 23322212 34444432221222345677888888887777544333443 45567788888999984
Q ss_pred cCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHHHHHHhccccc
Q 005134 357 CYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAMEVPS 436 (712)
Q Consensus 357 ~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~~~~~~~~ 436 (712)
|||+|+|||||.++|++|||||+||+||.+|+|+|++++++.+.+.+|++|++||+|++..++..+....+.+..
T Consensus 322 --grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~--- 396 (570)
T 3fmw_A 322 --GRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPVAERVLLNTRAQLALMRP--- 396 (570)
T ss_dssp --TTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS---
T ss_pred --CCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 999999999999999999999999999999999999999999999999999999999999999888655443321
Q ss_pred ccCCCcchhhhhHHHhhcccCCCCcHHHHHHHHHhHhhhhhhhhhhhcccCCCccchHHHHHHHHHHHcCCccccccccc
Q 005134 437 ALGLDPTIANSVHQLINRVAGSVLPSVLQKALLEGIFKVGRAQLSESLLNESNPLGSSRLAKLRHIFEEGKSLQLQFPAE 516 (712)
Q Consensus 437 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (712)
++.....+ +...+. .+ ..| .+++.+.. ...
T Consensus 397 ----~~~~~~~l----------------R~~~~~------------l~---~~~-------~~~~~~~~--------~~~ 426 (570)
T 3fmw_A 397 ----DEQHTTPL----------------RGFVEE------------LL---GTD-------EVNRYFTG--------MIT 426 (570)
T ss_dssp ----CTTTHHHH----------------HHHHHH------------HT---TSH-------HHHHHHHH--------HHH
T ss_pred ----CchHHHHH----------------HHHHHH------------Hh---cCH-------HHHHHHHH--------HHh
Confidence 11001111 111110 00 011 11111110 011
Q ss_pred ccCccccCCccccCCCCCCCCCCCCCCCccccccCCCCCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEcCCccchH
Q 005134 517 DLGFRYLKGALVPDSNCEVGAPEAPTGHRRDFVPSANPGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIAPVEESYH 596 (712)
Q Consensus 517 ~lgy~Y~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~~~~~~~~ 596 (712)
.++.+|+.+ ...++. . ....+|.|+|+++|...++..+.++||+..++ |+||.+.+.. .
T Consensus 427 g~~~~Y~~~--~~~~~~--------~-------~~~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~--~~ll~~~~~~--~ 485 (570)
T 3fmw_A 427 GTDVRYATF--APAASA--------R-------PHPWPGRFAGGLVLSRPSGEPVPVAELLRSAR--PLLLDLAGRA--D 485 (570)
T ss_dssp STTCCCCCS--CC------------C-------CCSSTTCBCTTCEECCSTTCCEEHHHHSTTCC--CEEECSSCBH--H
T ss_pred CCCcccCCC--CCCCCC--------C-------CCccccCcCCCceeecCCCcceeHHHHhcCCe--EEEEEecCCc--c
Confidence 356778654 111000 0 12369999999999742333489999998764 9999986431 1
Q ss_pred HHHHHHHhhhhcCCceEEEEEcCCCCcchhhhhhccccCCCCcccchhhhcccCCccchhhhhcccCCceEEEcCCceEE
Q 005134 597 LARAALKVAEDFKVPTKVCVLWPAGTTNEVEFRSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMGAILVRPDDHIA 676 (712)
Q Consensus 597 ~~~aa~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~gavLVRPDg~Va 676 (712)
. ..++. +|.+..|.... ...+. .+-.+||||||||||
T Consensus 486 ~----~~~~~-----------------------------~~~~~~~~~~~-------~~~~~---~~~~~~lvrpdg~va 522 (570)
T 3fmw_A 486 L----REATR-----------------------------PWSDRVSVVAG-------EATVE---PPAQALLVRPDGYVA 522 (570)
T ss_dssp H----HHTTT-----------------------------TCSSCEEECCC-------CSCCS---SCCSEEEECTTSBEE
T ss_pred h----hhhcc-----------------------------ccCCceEEEec-------ccCCC---CCceEEEECCCceEE
Confidence 2 12222 22222222110 00000 011589999999999
Q ss_pred EeeCCCCCCChHHHHHHHHHHhhCCCC
Q 005134 677 WRSKSGVSGNPKLEMEMAFSAVLGIKP 703 (712)
Q Consensus 677 Wr~~~~~~~~~~~~l~~~~~~~~~~~~ 703 (712)
|.++. + +....|.++|.+.+|...
T Consensus 523 w~~~~--~-~~~~~~~~~~~~w~~~~~ 546 (570)
T 3fmw_A 523 WAGSP--A-ATADELRASLARWFGPPA 546 (570)
T ss_dssp EEECT--T-CCHHHHHHHHHHHHCCCC
T ss_pred EecCC--C-CChHHHHHHHHHhcCCCC
Confidence 99862 2 234679999999999754
No 8
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=4.7e-41 Score=369.29 Aligned_cols=353 Identities=22% Similarity=0.196 Sum_probs=212.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCc--eeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEee
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQ--AHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~r--a~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~ 121 (712)
++|+||||||+||++|+.|+++|++|+||||++.+...++ ++.++++++++|+++ |+.+.+................
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~l-g~~~~~~~~~~~~~~~~~~~~~ 80 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQEC-LPAENWLAFEEASRYIGGQSRF 80 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHH-SCHHHHHHHHHHCEEECCCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHc-CChHHHHHhhhhhcccCcceeE
Confidence 6899999999999999999999999999999998876644 577899999999999 9887765422111000000011
Q ss_pred ecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEE
Q 005134 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (712)
Q Consensus 122 ~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~ 201 (712)
....+..+....... .............+.|..|+++|.+.+. .+|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~R~~L~~~L~~~~~----------------------~~v~~~~~v~~~~ 136 (412)
T 4hb9_A 81 YNERMRLLAVHGGIS--PMAGKIISEQRLSISRTELKEILNKGLA----------------------NTIQWNKTFVRYE 136 (412)
T ss_dssp ECTTSCEEEC----------------CEEEEEHHHHHHHHHTTCT----------------------TTEECSCCEEEEE
T ss_pred ecCCcceecccCCcc--ccccccccccceEeeHHHHHHHHHhhcc----------------------ceEEEEEEEEeee
Confidence 111222221111000 0000011223456889999998876532 2799999999999
Q ss_pred EcCC-eEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeecC-ccccccc-cCCCceE
Q 005134 202 ATDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSK-DLGDYLL-NERPGML 278 (712)
Q Consensus 202 ~~~~-~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~~-~l~~~~~-~~~~~~~ 278 (712)
+.++ +|++++. +|+ +++|||||||||++|.||+++++...........+....... ....... .......
T Consensus 137 ~~~~~~v~v~~~---dG~----~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (412)
T 4hb9_A 137 HIENGGIKIFFA---DGS----HENVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTP 209 (412)
T ss_dssp ECTTSCEEEEET---TSC----EEEESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCC
T ss_pred EcCCCeEEEEEC---CCC----EEEeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCc
Confidence 8665 4666553 564 689999999999999999999876554322222222111110 0000000 0000001
Q ss_pred EEEeecCCeEEEE---Eec---------CCCCeEEEEE---ecCCCCCCCCCCCHHHHHHHHHHHhCCCCCcc-------
Q 005134 279 FFIFNTEAIGVLV---AHD---------LKEGEFILQV---PFYPPQQNLEDFSPEICEKLIFKLVGWELSDI------- 336 (712)
Q Consensus 279 ~~~~~~~~~g~~~---~~~---------~~~~~~~~~~---~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~~~------- 336 (712)
..++.......++ ..+ .....+...+ ..........+++.+...+.+++.+......+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~ 289 (412)
T 4hb9_A 210 NSIVPKSPDWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQS 289 (412)
T ss_dssp EEECCSSSEEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTS
T ss_pred ceEeecCCCcceeeeeecCCceeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhc
Confidence 1111111111100 000 0111222221 11111223445667777777666553211111
Q ss_pred eEEEeecceec-hhhhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCc-hhhHHHHHHhhh
Q 005134 337 DVIDIKPWVMH-AEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAP-ASILNTYETERK 414 (712)
Q Consensus 337 ~i~~~~~w~~~-~~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~-~~lL~sY~~eRr 414 (712)
+.....+|... .....+|. .|||+|+|||||.|+|++|||||+||+||++|+|+|+.++++... +.+|++|++||+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~--~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye~~R~ 367 (412)
T 4hb9_A 290 DMENISPLHLRSMPHLLPWK--SSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYEQQMR 367 (412)
T ss_dssp CTTCCEEEEEEECCCCCCCC--CCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred ccceeccchhcccccccccc--ccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHH
Confidence 00112233322 22345676 599999999999999999999999999999999999999988765 889999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 005134 415 PIAEFNTALSVQNFRA 430 (712)
Q Consensus 415 p~a~~~~~~s~~~~~~ 430 (712)
|+++.+++.|.++...
T Consensus 368 ~~~~~~~~~s~~~~~~ 383 (412)
T 4hb9_A 368 AYANEIVGISLRSAQN 383 (412)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999877653
No 9
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=1.6e-37 Score=342.03 Aligned_cols=340 Identities=16% Similarity=0.144 Sum_probs=223.7
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeE
Q 005134 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (712)
Q Consensus 40 ~~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~ 119 (712)
++.++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++ |+.+++.+.+.+... +.
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~l-g~~~~~~~~~~~~~~---~~ 95 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHL-GMGDIMETFGGPLRR---MA 95 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHT-TCHHHHHHHSCCCCE---EE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHC-CCHHHHHhhcCCCcc---eE
Confidence 35679999999999999999999999999999999998888889999999999999999 999999888766532 23
Q ss_pred eeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 120 ~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
+.....|+.+..++... +.. ..+...+.++|..|++.|++.+.+ + +|+++++|++
T Consensus 96 ~~~~~~g~~~~~~~~~~---~~~-~~~~~~~~i~r~~l~~~L~~~~~~--~-------------------~i~~~~~v~~ 150 (407)
T 3rp8_A 96 YRDFRSGENMTQFSLAP---LIE-RTGSRPCPVSRAELQREMLDYWGR--D-------------------SVQFGKRVTR 150 (407)
T ss_dssp EEETTTCCEEEEEECHH---HHH-HHSSCCEEEEHHHHHHHHHHHHCG--G-------------------GEEESCCEEE
T ss_pred EEECCCCCEeEEecchh---hhh-hcCCceEEEEHHHHHHHHHHhCCc--C-------------------EEEECCEEEE
Confidence 33332366555443211 000 012234678999999999999876 4 8999999999
Q ss_pred EEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhccc-CCCcccccccccEEEEEeecCccccccccCCCceE
Q 005134 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLV-GIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGML 278 (712)
Q Consensus 200 v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~l-gi~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 278 (712)
+++++++|++++. +|+ +++||+||+|||.+|.||+.+ +............+...+.... . .......
T Consensus 151 i~~~~~~v~v~~~---~g~----~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~ 218 (407)
T 3rp8_A 151 CEEDADGVTVWFT---DGS----SASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDE---A--LAPGDQW 218 (407)
T ss_dssp EEEETTEEEEEET---TSC----EEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCT---T--TCCTTEE
T ss_pred EEecCCcEEEEEc---CCC----EEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEeccc---c--cCCCCce
Confidence 9999999877653 453 689999999999999999998 7642211110111111111111 0 1112223
Q ss_pred EEEeecCCeEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHhCCCCCc----------ceEEEeecceech
Q 005134 279 FFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSD----------IDVIDIKPWVMHA 348 (712)
Q Consensus 279 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~~----------~~i~~~~~w~~~~ 348 (712)
..++.++...++++.. ++.+.+.+....+... ..+++...+.+.+.+...... ..+.....+...
T Consensus 219 ~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (407)
T 3rp8_A 219 TTFVGEGKQVSLMPVS--AGRFYFFFDVPLPAGL--AEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIE- 293 (407)
T ss_dssp EEEEETTEEEEEEEET--TTEEEEEEEEECCTTC--SCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECC-
T ss_pred EEEECCCcEEEEEEcC--CCeEEEEEEeCCCcCC--CCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecC-
Confidence 3334565555555554 3444443332222111 112222333444433221110 111111111111
Q ss_pred hhhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHHHH
Q 005134 349 EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNF 428 (712)
Q Consensus 349 ~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~ 428 (712)
..++|. .|||+|+|||||.++|++|||+|+||+||.+|+|+|+.. + ..+.+|++|+++|++++..+++.+....
T Consensus 294 -~~~~~~--~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~--~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~ 367 (407)
T 3rp8_A 294 -PFSRLV--RGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT--R-DIAAALREYEAQRCDRVRDLVLKARKRC 367 (407)
T ss_dssp -CCSCCE--ETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC--C-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCcee--cCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC--C-CHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 226776 499999999999999999999999999999999999842 3 5689999999999999999999887766
Q ss_pred HHh
Q 005134 429 RAA 431 (712)
Q Consensus 429 ~~~ 431 (712)
+.+
T Consensus 368 ~~~ 370 (407)
T 3rp8_A 368 DIT 370 (407)
T ss_dssp HHH
T ss_pred hhh
Confidence 544
No 10
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=4.8e-36 Score=330.52 Aligned_cols=345 Identities=21% Similarity=0.251 Sum_probs=220.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~-v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
.++||+||||||+||++|+.|+++|++ |+||||.+.+...+++..++++++++|+++ |+.+.+.+.+.+... +.+
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~l-g~~~~l~~~~~~~~~---~~~ 78 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAEL-GLGPALAATAIPTHE---LRY 78 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHT-TCHHHHHHHSEEECE---EEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHC-CChHHHHhhCCCcce---EEE
Confidence 458999999999999999999999999 999999998877888999999999999999 999999887654422 222
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHh-cCceeeccCccccccccccccceEEeCcEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
.+..|..+......... ....+...+.|..|++.|.+.+.+ .|. ++|+++++|++
T Consensus 79 -~~~~g~~~~~~~~~~~~-----~~~~~~~~i~r~~l~~~L~~~~~~~~g~------------------~~v~~~~~v~~ 134 (410)
T 3c96_A 79 -IDQSGATVWSEPRGVEA-----GNAYPQYSIHRGELQMILLAAVRERLGQ------------------QAVRTGLGVER 134 (410)
T ss_dssp -ECTTSCEEEEEECGGGG-----TCSSCEEEEEHHHHHHHHHHHHHHHHCT------------------TSEEESEEEEE
T ss_pred -EcCCCCEEeeccCCccc-----cCCCCeeeeeHHHHHHHHHHHHHhhCCC------------------cEEEECCEEEE
Confidence 22345544322110000 011223578899999999999876 353 38999999999
Q ss_pred EEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeecCccccccccCCCceEE
Q 005134 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (712)
Q Consensus 200 v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (712)
+++ +++|++++.+..+|+ +.+++||+||+|||++|.||+.++..... ..+.....+.... ....+ .....+
T Consensus 135 i~~-~~~v~v~~~~~~~g~--~~~~~ad~vV~AdG~~S~vR~~l~~~~~~-~~~~g~~~~~~~~-~~~~~----~~~~~~ 205 (410)
T 3c96_A 135 IEE-RDGRVLIGARDGHGK--PQALGADVLVGADGIHSAVRAHLHPDQRP-LSHGGITMWRGVT-EFDRF----LDGKTM 205 (410)
T ss_dssp EEE-ETTEEEEEEEETTSC--EEEEEESEEEECCCTTCHHHHHHCTTCCC-CEEEEEEEEEEEE-EESCC----TTSSEE
T ss_pred Eec-CCccEEEEecCCCCC--ceEEecCEEEECCCccchhHHHhcCCCCC-CCcCCeeEEEeec-ccccc----cCCCeE
Confidence 999 778888776322353 35799999999999999999999754321 1111111111111 01111 112223
Q ss_pred EEeec--CCeEEEEEecC-----CCCe--EEEEEecCC--CCCCCCCCCH-HHHHHHHHHHhCCCCC--cc-eE----EE
Q 005134 280 FIFNT--EAIGVLVAHDL-----KEGE--FILQVPFYP--PQQNLEDFSP-EICEKLIFKLVGWELS--DI-DV----ID 340 (712)
Q Consensus 280 ~~~~~--~~~g~~~~~~~-----~~~~--~~~~~~~~~--~~~~~~~~~~-e~~~~~i~~~~g~~~~--~~-~i----~~ 340 (712)
+++++ ....++++... +... |++..+... .......+.. ....++++.+-++... .+ ++ ..
T Consensus 206 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~ 285 (410)
T 3c96_A 206 IVANDEHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQL 285 (410)
T ss_dssp EEEECTTCCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCSE
T ss_pred EEecCCCCcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCcc
Confidence 33332 33334444321 1112 322222110 0011112211 1112233333222111 00 00 11
Q ss_pred eecceech-hhhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHH
Q 005134 341 IKPWVMHA-EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEF 419 (712)
Q Consensus 341 ~~~w~~~~-~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~ 419 (712)
...|++.. ..+++|. .|||+|+|||||.|+|++|||+|+||+||.+|+|+|+.. ...+.+|++|+++|++++..
T Consensus 286 ~~~~~~~~~~~~~~~~--~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~~~~L~~Ye~~r~~~~~~ 360 (410)
T 3c96_A 286 ILQYPMVDRDPLPHWG--RGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN---ADVAAALREYEEARRPTANK 360 (410)
T ss_dssp EEEEEEEECCCCSCCC--BTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---SSHHHHHHHHHHHHHHHHHH
T ss_pred cceeecccCCCccccc--cCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHH
Confidence 22344322 2356786 499999999999999999999999999999999999863 24678999999999999999
Q ss_pred HHHHHHHHH
Q 005134 420 NTALSVQNF 428 (712)
Q Consensus 420 ~~~~s~~~~ 428 (712)
++..+.+.+
T Consensus 361 ~~~~s~~~~ 369 (410)
T 3c96_A 361 IILANRERE 369 (410)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhHHHH
Confidence 988877443
No 11
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=1.5e-36 Score=332.49 Aligned_cols=338 Identities=19% Similarity=0.261 Sum_probs=222.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC--CCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF--STHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~--~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
++||+||||||+||++|+.|+++|++|+||||.+.+ ....++..++++++++|+++ |+.+.+.+.+.+... +.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~l-g~~~~~~~~~~~~~~---~~~ 77 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREA-GVDRRMARDGLVHEG---VEI 77 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHT-TCCHHHHHHCEEESC---EEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHc-CCcHHHHhcCCccce---EEE
Confidence 489999999999999999999999999999998753 23456667999999999999 999998876654322 111
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
.. .+.. ..++ +.....+.....++|..+.+.|.+.+.+.|+ +|+++++|+++
T Consensus 78 ~~--~~~~-~~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~-------------------~i~~~~~v~~i 129 (394)
T 1k0i_A 78 AF--AGQR-RRID------LKRLSGGKTVTVYGQTEVTRDLMEAREACGA-------------------TTVYQAAEVRL 129 (394)
T ss_dssp EE--TTEE-EEEC------HHHHHTSCCEEECCHHHHHHHHHHHHHHTTC-------------------EEESSCEEEEE
T ss_pred EE--CCce-EEec------cccccCCCceEEechHHHHHHHHHHHHhcCC-------------------eEEeceeEEEE
Confidence 11 1211 1111 1100112234567889999999999888776 99999999999
Q ss_pred EEcC-CeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeec--CccccccccCCCce
Q 005134 201 SATD-QCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS--KDLGDYLLNERPGM 277 (712)
Q Consensus 201 ~~~~-~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~--~~l~~~~~~~~~~~ 277 (712)
++++ +++++++. ++|+ +.+++||+||+|||.+|.||+.+++... ..+.......+.. .+.. ...+..
T Consensus 130 ~~~~~~~~~v~~~--~~g~--~~~~~a~~vV~AdG~~S~vr~~l~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~ 199 (394)
T 1k0i_A 130 HDLQGERPYVTFE--RDGE--RLRLDCDYIAGCDGFHGISRQSIPAERL--KVFERVYPFGWLGLLADTP----PVSHEL 199 (394)
T ss_dssp ECTTSSSCEEEEE--ETTE--EEEEECSEEEECCCTTCSTGGGSCGGGC--EEEEEEEEEEEEEEEESSC----CSCSSC
T ss_pred EEecCCceEEEEe--cCCc--EEEEEeCEEEECCCCCcHHHHhcCcccc--ccccccccceeEEEecCCC----CCccce
Confidence 9864 56777763 2453 3479999999999999999999976521 1111111111110 0110 111222
Q ss_pred EEEEeecCCeEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHhCCC----CCcceEEEeecceechhhhcc
Q 005134 278 LFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWE----LSDIDVIDIKPWVMHAEVAEK 353 (712)
Q Consensus 278 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~----~~~~~i~~~~~w~~~~~va~~ 353 (712)
++...++...++...+.....|.+..+ + ......++++...+.+.+.++.. ...........|++....+++
T Consensus 200 -~~~~~~~g~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (394)
T 1k0i_A 200 -IYANHPRGFALCSQRSATRSQYYVQVP--L-SEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVEP 275 (394)
T ss_dssp -EEECCTTCCEEEEEEETTEEEEEEEEC--T-TCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEEEEEEEEEEEEEC
T ss_pred -EEEEcCCceEEEEecCCCcEEEEEEeC--C-CCCccccCHHHHHHHHHHhhCcccccccccCcceeeEEEEhhhhhccc
Confidence 222334434443333322123333332 2 22233456665555555544321 111122222334455556777
Q ss_pred ccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHHHHH
Q 005134 354 FLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (712)
Q Consensus 354 ~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (712)
|. .|||+|+|||||.|+|++|||+|+||+||.+|+|+|+..+++. .+.+|++|+++|++++..+++.+..+..
T Consensus 276 ~~--~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~-~~~~L~~Y~~~r~~~~~~~~~~s~~~~~ 348 (394)
T 1k0i_A 276 MQ--HGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREG-RGELLERYSAICLRRIWKAERFSWWMTS 348 (394)
T ss_dssp SE--ETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHC-CGGGGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc--cCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77 4999999999999999999999999999999999999887543 4789999999999999988887765443
No 12
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=6.8e-37 Score=335.95 Aligned_cols=341 Identities=19% Similarity=0.221 Sum_probs=232.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
+.++||+||||||+||++|+.|+++|++|+||||++.+...+++..++++++++|+++ |+.+++...+.+... +.+
T Consensus 4 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~-g~~~~~~~~~~~~~~---~~~ 79 (399)
T 2x3n_A 4 DNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAA-GLLAEVTRRGGRVRH---ELE 79 (399)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHT-TCHHHHHHTTCEEEC---EEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHc-CcHHHHHHhCCCcce---eEE
Confidence 4468999999999999999999999999999999988877889999999999999999 999998876654422 111
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhc-CceeeccCccccccccccccceEEeCcEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
....|..+..++.... ..+.....++|..|.+.|.+.+.+. |+ +|+++++|++
T Consensus 80 -~~~~g~~~~~~~~~~~------~~~~~~~~~~r~~l~~~L~~~~~~~~gv-------------------~i~~~~~v~~ 133 (399)
T 2x3n_A 80 -VYHDGELLRYFNYSSV------DARGYFILMPCESLRRLVLEKIDGEATV-------------------EMLFETRIEA 133 (399)
T ss_dssp -EEETTEEEEEEETTSS------CGGGCEEECCHHHHHHHHHHHHTTCTTE-------------------EEECSCCEEE
T ss_pred -EeCCCCEEEecchHHh------cccCccccccHHHHHHHHHHHhhhcCCc-------------------EEEcCCEEEE
Confidence 1223433332221110 0122235789999999999999887 65 9999999999
Q ss_pred EEEcCCeE--EEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccc--cccccEEEEEeecCccccccccCCC
Q 005134 200 VSATDQCI--NVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGE--KDLQKLVSVHFLSKDLGDYLLNERP 275 (712)
Q Consensus 200 v~~~~~~v--~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~--~~~~~~~~~~~~~~~l~~~~~~~~~ 275 (712)
++++++++ ++++. +|+ ++++|+||+|||.+|.||+.+|++.... .....+..+.+... .. . ...
T Consensus 134 i~~~~~~v~g~v~~~---~g~----~~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~-~~-~--~~~- 201 (399)
T 2x3n_A 134 VQRDERHAIDQVRLN---DGR----VLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAP-CV-A--ERN- 201 (399)
T ss_dssp EEECTTSCEEEEEET---TSC----EEEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCH-HH-H--HCE-
T ss_pred EEEcCCceEEEEEEC---CCC----EEECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEec-CC-C--CCc-
Confidence 99998887 66553 453 6899999999999999999998876543 22220022222111 10 0 111
Q ss_pred ceEEEEeec-CCeEEEEEecCCCCeEEEEEecCCCC-CCC-CCCCHHHHHHHHHHHhCCCC--CcceEEE---eecceec
Q 005134 276 GMLFFIFNT-EAIGVLVAHDLKEGEFILQVPFYPPQ-QNL-EDFSPEICEKLIFKLVGWEL--SDIDVID---IKPWVMH 347 (712)
Q Consensus 276 ~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~e~~~~~i~~~~g~~~--~~~~i~~---~~~w~~~ 347 (712)
. ..+.+ +...++++.+. +.+.+.+.+.+.. ... ...+.+.+.+.++. ++... ..++... ...|++.
T Consensus 202 --~-~~~~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 275 (399)
T 2x3n_A 202 --R-LYVDSQGGLAYFYPIGF--DRARLVVSFPREEARELMADTRGESLRRRLQR-FVGDESAEAIAAVTGTSRFKGIPI 275 (399)
T ss_dssp --E-EEECTTSCEEEEEEETT--TEEEEEEECCHHHHHHHHHSTTSHHHHHHHHT-TCCGGGHHHHHTCCCSTTCEECCC
T ss_pred --c-EEEcCCCcEEEEEEcCC--CEEEEEEEeCccccccccccCCHHHHHHHHhh-cCCcchhhHHhcCCccceEEechh
Confidence 2 34456 55555555543 5566554221110 000 01234455555553 22221 1122111 2345555
Q ss_pred h-hhhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHc-CCCchhhHHHHHHhhhHHHHHHHHHHH
Q 005134 348 A-EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK-DIAPASILNTYETERKPIAEFNTALSV 425 (712)
Q Consensus 348 ~-~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~-g~a~~~lL~sY~~eRrp~a~~~~~~s~ 425 (712)
. ..+++|. .|||+|+|||||.++|++|||+|+||+||.+|+|+|+..++ +...+.+|++|+++|++++..+++.+.
T Consensus 276 ~~~~~~~~~--~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~ 353 (399)
T 2x3n_A 276 GYLNLDRYW--ADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGH 353 (399)
T ss_dssp CCEECSCSE--ETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccccc--cCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhccHHHHHHHHHH
Confidence 5 5677887 49999999999999999999999999999999999999876 444588999999999999999998886
Q ss_pred HHHHHh
Q 005134 426 QNFRAA 431 (712)
Q Consensus 426 ~~~~~~ 431 (712)
.+.+.+
T Consensus 354 ~~~~~~ 359 (399)
T 2x3n_A 354 ALATSL 359 (399)
T ss_dssp HHHHHT
T ss_pred Hhhhhh
Confidence 655443
No 13
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=1.4e-36 Score=333.32 Aligned_cols=335 Identities=16% Similarity=0.161 Sum_probs=214.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeE
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF-STHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~-~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~ 119 (712)
+.++||+||||||+||++|+.|+++|++|+||||.+.+ ...+++..++++++++|+++ |+.+ ...+.+.. .+.
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~-g~~~--~~~~~~~~---~~~ 76 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQ-GVEL--DSISVPSS---SME 76 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHT-TCCG--GGTCBCCC---EEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHc-CCcc--cccccccc---ceE
Confidence 45689999999999999999999999999999999875 44567888999999999999 8876 33333322 222
Q ss_pred eeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 120 ~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
+.....|..+..... + ...+.+..|.+.|.+.+. ++ +|+++++|++
T Consensus 77 ~~~~~~g~~~~~~~~-----------~--~~~~~~~~l~~~L~~~~~--~~-------------------~i~~~~~v~~ 122 (397)
T 2vou_A 77 YVDALTGERVGSVPA-----------D--WRFTSYDSIYGGLYELFG--PE-------------------RYHTSKCLVG 122 (397)
T ss_dssp EEETTTCCEEEEEEC-----------C--CCEEEHHHHHHHHHHHHC--ST-------------------TEETTCCEEE
T ss_pred EEecCCCCccccccC-----------c--ccccCHHHHHHHHHHhCC--Cc-------------------EEEcCCEEEE
Confidence 222224544432211 1 123567788888888752 33 8999999999
Q ss_pred EEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeec--CccccccccCCCce
Q 005134 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS--KDLGDYLLNERPGM 277 (712)
Q Consensus 200 v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~--~~l~~~~~~~~~~~ 277 (712)
++++++++++++. +|+ ++++|+||+|||.+|.||+.++ +.. ..+.....+.... .++...........
T Consensus 123 i~~~~~~v~v~~~---~g~----~~~ad~vV~AdG~~S~vr~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (397)
T 2vou_A 123 LSQDSETVQMRFS---DGT----KAEANWVIGADGGASVVRKRLL-GIE--PTYAGYVTWRGVLQPGEVADDVWNYFNDK 192 (397)
T ss_dssp EEECSSCEEEEET---TSC----EEEESEEEECCCTTCHHHHHHH-CCC--CEEEEEEEEEEEECTTSSCHHHHHHHTTE
T ss_pred EEecCCEEEEEEC---CCC----EEECCEEEECCCcchhHHHHhc-cCC--CCccceEEEEEEeeccccChhhhhhhcCc
Confidence 9999998877653 453 6899999999999999999998 542 2222222211111 11111000000012
Q ss_pred EEEEeecCCeEEEEEecCCCC------eEEEEEecCCCC--CC----C-----------CCCCHHHHHHHHHHHhC-CCC
Q 005134 278 LFFIFNTEAIGVLVAHDLKEG------EFILQVPFYPPQ--QN----L-----------EDFSPEICEKLIFKLVG-WEL 333 (712)
Q Consensus 278 ~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~--~~----~-----------~~~~~e~~~~~i~~~~g-~~~ 333 (712)
..+...++...++++.+...+ .|++..+..... .. . ...+++...++++.+.. +.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (397)
T 2vou_A 193 FTYGLLDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP 272 (397)
T ss_dssp EEEEEETTEEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH
T ss_pred eeEEecCCCEEEEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH
Confidence 223334444334444443222 244444422100 00 0 00134444444443321 111
Q ss_pred CcceEE----EeecceechhhhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHH
Q 005134 334 SDIDVI----DIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTY 409 (712)
Q Consensus 334 ~~~~i~----~~~~w~~~~~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY 409 (712)
-.+++ ....|++....+++|. .|||+|+|||||.|+|++|||+|+||+||.+|+++|.. +.+.+.+|++|
T Consensus 273 -~~~~~~~~~~~~~~~~~~~~~~~~~--~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~---~~~~~~~L~~Y 346 (397)
T 2vou_A 273 -FRDLVLNASSPFVTVVADATVDRMV--HGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK---NHDLRGSLQSW 346 (397)
T ss_dssp -HHHHHHHCSSCEEEEEEEBCCSCSE--ETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH---CSCHHHHHHHH
T ss_pred -HHHHHhccCCcceeeeeeecCCcee--cCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc---CCCHHHHHHHH
Confidence 00111 1113445555677887 49999999999999999999999999999999999974 33457899999
Q ss_pred HHhhhHHHHHHHHHHHHHHHHh
Q 005134 410 ETERKPIAEFNTALSVQNFRAA 431 (712)
Q Consensus 410 ~~eRrp~a~~~~~~s~~~~~~~ 431 (712)
+++|+|++..+++.|..+.+.+
T Consensus 347 e~~R~~~~~~~~~~s~~~~~~~ 368 (397)
T 2vou_A 347 ETRQLQQGHAYLNKVKKMASRL 368 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887765544
No 14
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=3.5e-35 Score=322.37 Aligned_cols=341 Identities=18% Similarity=0.220 Sum_probs=212.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC--ceeecCH-hHHHHHHhhhcHHHHHHhcCCCccccce
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP--QAHFINN-RYALVFRKLDGLAEEIERSQPPVDLWRK 117 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~--ra~~i~~-rtmeilr~l~Gl~d~l~~~~~~~~~~~~ 117 (712)
+.++||+||||||+||++|+.|+++|++|+||||.+.+...+ .+..+.+ .++++|+++ |+.+++...+.+...
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~-gl~~~~~~~~~~~~~--- 99 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKA-GLLQTYYDLALPMGV--- 99 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHT-TCHHHHHHHCBCCCE---
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhc-ChHHHHHHhhcccce---
Confidence 456899999999999999999999999999999998765433 3444554 579999999 999999877654422
Q ss_pred eEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEE
Q 005134 118 FIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHEC 197 (712)
Q Consensus 118 ~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v 197 (712)
.+ ....|..+.... .+. ........+.|..|++.|.+.+.+ ++|+++++|
T Consensus 100 -~~-~~~~g~~~~~~~--~~~-----~~~~~~~~i~r~~l~~~L~~~~~~---------------------~~i~~~~~v 149 (398)
T 2xdo_A 100 -NI-ADEKGNILSTKN--VKP-----ENRFDNPEINRNDLRAILLNSLEN---------------------DTVIWDRKL 149 (398)
T ss_dssp -EE-ECSSSEEEEECC--CGG-----GTTSSCCEECHHHHHHHHHHTSCT---------------------TSEEESCCE
T ss_pred -EE-ECCCCCchhhcc--ccc-----cCCCCCceECHHHHHHHHHhhcCC---------------------CEEEECCEE
Confidence 11 223344332210 000 001112357899999999887543 278999999
Q ss_pred EEEEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEE--EEeecCcc--ccccccC
Q 005134 198 VSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVS--VHFLSKDL--GDYLLNE 273 (712)
Q Consensus 198 ~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~--~~~~~~~l--~~~~~~~ 273 (712)
++++++++++++++. +|+ ++++|+||+|||.+|.||+.++... ..+..... ..+...+. ..+....
T Consensus 150 ~~i~~~~~~v~v~~~---~g~----~~~ad~vV~AdG~~S~vR~~l~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~ 219 (398)
T 2xdo_A 150 VMLEPGKKKWTLTFE---NKP----SETADLVILANGGMSKVRKFVTDTE---VEETGTFNIQADIHQPEINCPGFFQLC 219 (398)
T ss_dssp EEEEECSSSEEEEET---TSC----CEEESEEEECSCTTCSCCTTTCCCC---CEEEEEEEEEEEESSHHHHSHHHHHHH
T ss_pred EEEEECCCEEEEEEC---CCc----EEecCEEEECCCcchhHHhhccCCC---ceEcceEEEEEEeCchhccCchhHhhc
Confidence 999999888776653 453 5899999999999999999986421 11111111 11111010 0000000
Q ss_pred CCceEEEEeecCCeEEEEEecCCCCeEEEEEecCCCCCC-----CCCCCHHHHHHHHHHHhCCCCCcc-eEE----Eeec
Q 005134 274 RPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQN-----LEDFSPEICEKLIFKLVGWELSDI-DVI----DIKP 343 (712)
Q Consensus 274 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~e~~~~~i~~~~g~~~~~~-~i~----~~~~ 343 (712)
..+. ++.+.++...+..+.+ ++.+.+.+.+..+... ....+++...+.+.+.++.-...+ +++ ....
T Consensus 220 ~~g~-~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 296 (398)
T 2xdo_A 220 NGNR-LMASHQGNLLFANPNN--NGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVG 296 (398)
T ss_dssp TTSE-EEEEETTEEEEEEEEE--TTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEE
T ss_pred CCce-EEEecCCCeEEEEeCC--CCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCccccee
Confidence 1222 3344554333333332 3444443322222111 111244555555555443210010 000 1112
Q ss_pred ceech-hhhccccccCC--cEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCC-chhhHHHHHHhhhHHHHH
Q 005134 344 WVMHA-EVAEKFLCCYN--QIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIA-PASILNTYETERKPIAEF 419 (712)
Q Consensus 344 w~~~~-~va~~~~~~~g--RV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a-~~~lL~sY~~eRrp~a~~ 419 (712)
|.... ....+|.. .+ ||+|+|||||.|+|++|||+|+||+||.+|+|+|+.. +.. .+.+|++|+++|++++..
T Consensus 297 ~~~~~~~~~~~~~~-~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~--~~~~~~~~L~~Y~~~r~~~~~~ 373 (398)
T 2xdo_A 297 LATRIFPLEKPWKS-KRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG--KFNSIEEAVKNYEQQMFIYGKE 373 (398)
T ss_dssp EEEEECCCCSCCCS-CCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC--CSSSHHHHHHHHHHHHHHHHHH
T ss_pred eeeEeccCCCCccc-CCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc--cCchHHHHHHHHHHHHHHHHHH
Confidence 22221 12345642 25 9999999999999999999999999999999999864 222 478999999999999999
Q ss_pred HHHHHHHHHHHh
Q 005134 420 NTALSVQNFRAA 431 (712)
Q Consensus 420 ~~~~s~~~~~~~ 431 (712)
++..+..+...+
T Consensus 374 ~~~~s~~~~~~~ 385 (398)
T 2xdo_A 374 AQEESTQNEIEM 385 (398)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999888776554
No 15
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.7e-32 Score=298.99 Aligned_cols=329 Identities=13% Similarity=0.093 Sum_probs=200.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC-CCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeE
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS-THPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~-~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~ 119 (712)
|+++||+||||||+||++|+.|+++|++|+||||++.+. ...++..|+++.+ +.+ |+.........+ .....
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l---~~l-~~~~~~~~~~~~---~~~~~ 74 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGIL---NEA-DIKADRSFIANE---VKGAR 74 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHH---HHT-TCCCCTTTEEEE---ESEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHH---HHc-CCCchhhhhhcc---cceEE
Confidence 567999999999999999999999999999999988763 3445777877654 444 442111111000 11111
Q ss_pred eeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 120 ~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
. ....+......... ...+...+.+.|..|++.|.+.+.+.|+ ++++++++++
T Consensus 75 ~-~~~~~~~~~~~~~~-------~~~~~~~~~i~R~~~~~~L~~~a~~~G~-------------------~~~~~~~v~~ 127 (397)
T 3oz2_A 75 I-YGPSEKRPIILQSE-------KAGNEVGYVLERDKFDKHLAALAAKAGA-------------------DVWVKSPALG 127 (397)
T ss_dssp E-ECTTCSSCEEEECS-------SSSCCCEEEECHHHHHHHHHHHHHHHTC-------------------EEESSCCEEE
T ss_pred E-EeCCCceEeecccc-------ccCCceeEEEEHHHHHHHHHHHHHhcCc-------------------EEeeeeeeee
Confidence 1 11122211111100 0112234578999999999999999887 9999999999
Q ss_pred EEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeecCccccccccCCCceEE
Q 005134 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (712)
Q Consensus 200 v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (712)
+.++++.++..... .+++ ..+++||+||+|||++|.||+.+|+.............+.+..... ...+....
T Consensus 128 ~~~~~~~~~~v~~~-~~~~--~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 199 (397)
T 3oz2_A 128 VIKENGKVAGAKIR-HNNE--IVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINV-----DVDPDYTD 199 (397)
T ss_dssp EEEETTEEEEEEEE-ETTE--EEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESC-----CCCTTEEE
T ss_pred eeeccceeeeeeec-cccc--ceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeecc-----ccCcccce
Confidence 99998887654432 2332 4689999999999999999999998765443333333333322111 11122222
Q ss_pred EEee---cCCeEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHhCCCC--CcceEEEe-ecceechhhhcc
Q 005134 280 FIFN---TEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWEL--SDIDVIDI-KPWVMHAEVAEK 353 (712)
Q Consensus 280 ~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~--~~~~i~~~-~~w~~~~~va~~ 353 (712)
+.+. +....++.+.. ++.+.+.+...... ........+.+.+++...+ ...+.... ..+........+
T Consensus 200 ~~~~~~~~~g~~~~~~~~--~~~~~vg~~~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 273 (397)
T 3oz2_A 200 FYLGSIAPAGYIWVFPKG--EGMANVGIGSSINW----IHNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMP 273 (397)
T ss_dssp EECSTTSTTEEEEEEEEE--TTEEEEEEEEETTT----SCSHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSC
T ss_pred eeeeccCCCceEEEeecc--cceeEEEEeeccch----hhhhhhHHHHHHHHHHhCccccccceeeeeeccccccCcccc
Confidence 2222 22233334333 23443332211111 1122333344444332211 11111111 111122233345
Q ss_pred ccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHH-cCCCchhhHHHHHHhhhHHHHH
Q 005134 354 FLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVL-KDIAPASILNTYETERKPIAEF 419 (712)
Q Consensus 354 ~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl-~g~a~~~lL~sY~~eRrp~a~~ 419 (712)
+. .+||+|+|||||.++|++|||+|+||+||..||+.|+..+ .+...+.+|+.|+++++..-..
T Consensus 274 ~~--~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~~~~ 338 (397)
T 3oz2_A 274 IT--MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFER 338 (397)
T ss_dssp CE--ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHH
T ss_pred ee--eeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHH
Confidence 55 4899999999999999999999999999999999999877 4566789999999988876543
No 16
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=2.7e-33 Score=305.27 Aligned_cols=323 Identities=16% Similarity=0.192 Sum_probs=211.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
|..+||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++ |+.+++...+.+... +.+
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~-g~~~~~~~~~~~~~~---~~~ 84 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGL-GALDDVLQGSHTPPT---YET 84 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHT-TCHHHHHTTCBCCSC---EEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHc-CCHHHHHhhCCCccc---eEE
Confidence 3468999999999999999999999999999999998877889999999999999999 999999887655432 223
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
... |..+...+.. ......++|..|+..|.+.+.+.|+ +|+++++|+++
T Consensus 85 ~~~--g~~~~~~~~~----------~~~~~~~~r~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~i 133 (379)
T 3alj_A 85 WMH--NKSVSKETFN----------GLPWRIMTRSHLHDALVNRARALGV-------------------DISVNSEAVAA 133 (379)
T ss_dssp EET--TEEEEEECGG----------GCCEEEEEHHHHHHHHHHHHHHTTC-------------------EEESSCCEEEE
T ss_pred EeC--CceeeeccCC----------CCceEEECHHHHHHHHHHHHHhcCC-------------------EEEeCCEEEEE
Confidence 222 4444332110 1124678999999999999998876 99999999999
Q ss_pred EEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeecCccccc-cccCCCceEE
Q 005134 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDY-LLNERPGMLF 279 (712)
Q Consensus 201 ~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~ 279 (712)
++ ++ ++++. +|+ ++++|+||+|||.+|.+|+.+++... . .+.....+.+..+ .... .....+...+
T Consensus 134 ~~--~~-~v~~~---~g~----~~~ad~vV~AdG~~s~vr~~l~~~~~-~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 200 (379)
T 3alj_A 134 DP--VG-RLTLQ---TGE----VLEADLIVGADGVGSKVRDSIGFKQD-R-WVSKDGLIRLIVP-RMKKELGHGEWDNTI 200 (379)
T ss_dssp ET--TT-EEEET---TSC----EEECSEEEECCCTTCHHHHHHCCCEE-E-EEEEEEEEEEEEE-CCHHHHCSSCTTSEE
T ss_pred Ee--CC-EEEEC---CCC----EEEcCEEEECCCccHHHHHHhcCCCC-c-CcCCcEEEEEEec-hhhccCCcCCccccc
Confidence 88 34 55543 453 68999999999999999999986421 1 1111111111111 0000 0000011111
Q ss_pred E---EeecCCeEEEEEecCCCCeEEEEEecCCCCCCCCCCCH--HHHH-------HHHHHHhCCCCCcceEEEeecceec
Q 005134 280 F---IFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSP--EICE-------KLIFKLVGWELSDIDVIDIKPWVMH 347 (712)
Q Consensus 280 ~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--e~~~-------~~i~~~~g~~~~~~~i~~~~~w~~~ 347 (712)
. .+.++...++++.+ ++...+.+.+.......+.+.+ +.+. +++...-.. ....|.+.
T Consensus 201 ~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~~~~ 270 (379)
T 3alj_A 201 DMWNFWPRVQRILYSPCN--ENELYLGLMAPAADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKL--------KTARYDKY 270 (379)
T ss_dssp EEECCSSSCCEEEEEECS--SSEEEEEEEECTTCTTTTCSSCCHHHHHHHCGGGHHHHHHHHTC--------TTCCEEEE
T ss_pred ccceEECCCCEEEEEECC--CCcEEEEEEecCCCCCHHHHHHHHhcCCchhccHHHHHhhCCcc--------ceEEeccc
Confidence 1 23454444444443 3443333222211110111110 1111 122221100 11223332
Q ss_pred h-hhhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHH
Q 005134 348 A-EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQ 426 (712)
Q Consensus 348 ~-~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~ 426 (712)
. ..+++|. .|||+|+|||||.++|++|||+|+||+||.+|+|+|+. ....+.+|++|+++|++++..+++.+..
T Consensus 271 ~~~~~~~~~--~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~---~~~~~~~l~~Y~~~r~~~~~~~~~~s~~ 345 (379)
T 3alj_A 271 ETTKLDSWT--RGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEE---GSSVEDALVAWETRIRPITDRCQALSGD 345 (379)
T ss_dssp EEEEESCSE--ETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTS---SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCcc--cCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhcc---ccCHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 2 2356776 49999999999999999999999999999999999974 2234789999999999999999988843
No 17
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=2.2e-31 Score=301.67 Aligned_cols=348 Identities=15% Similarity=0.140 Sum_probs=219.0
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHH-HHHhhhcHHHHHHhcCCCcccccee
Q 005134 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYAL-VFRKLDGLAEEIERSQPPVDLWRKF 118 (712)
Q Consensus 40 ~~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtme-ilr~l~Gl~d~l~~~~~~~~~~~~~ 118 (712)
.+.++||+||||||+||++|+.|+++|++|+||||.+.+... .+..+.+.++. +++.+ |+.+.+...+.+......+
T Consensus 4 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~-~g~~~~~~~~~~~l~~l-gl~~~~~~~~~~~~~~~~~ 81 (512)
T 3e1t_A 4 RPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQ-IGESLLPATVHGICAML-GLTDEMKRAGFPIKRGGTF 81 (512)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCC-SCCBCCHHHHTTHHHHT-TCHHHHHTTTCCEECEEEE
T ss_pred CCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCC-CCcccCcchHHHHHHHh-CcHHHHHHcCCccccCceE
Confidence 356799999999999999999999999999999999865443 35566777664 89998 9999998877654332222
Q ss_pred EeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEE
Q 005134 119 IYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECV 198 (712)
Q Consensus 119 ~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~ 198 (712)
.+.. ...... +...... .......+++++..|.+.|.+.+.+.|+ +|+++++|+
T Consensus 82 ~~~~--~~~~~~-~~~~~~~----~~~~~~~~~v~r~~l~~~L~~~a~~~Gv-------------------~i~~~~~V~ 135 (512)
T 3e1t_A 82 RWGK--EPEPWT-FGFTRHP----DDPYGFAYQVERARFDDMLLRNSERKGV-------------------DVRERHEVI 135 (512)
T ss_dssp ECSS--CSSCEE-EESSSSS----SSTTCCEEBCCHHHHHHHHHHHHHHTTC-------------------EEESSCEEE
T ss_pred EecC--Cccccc-cccccCC----CCCcceeeEecHHHHHHHHHHHHHhCCC-------------------EEEcCCEEE
Confidence 2111 111100 1110000 0112234678999999999999998887 999999999
Q ss_pred EEEEcCCeEE-EEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeecC-ccccccccCCCc
Q 005134 199 SVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSK-DLGDYLLNERPG 276 (712)
Q Consensus 199 ~v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~~-~l~~~~~~~~~~ 276 (712)
+++.+++.++ +++.+ .+|+ +.+++||+||+|||.+|.+|+++|+...........+...+... .+. .....
T Consensus 136 ~v~~~~~~v~gv~~~~-~dG~--~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~ 208 (512)
T 3e1t_A 136 DVLFEGERAVGVRYRN-TEGV--ELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLP----APRQG 208 (512)
T ss_dssp EEEEETTEEEEEEEEC-SSSC--EEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCS----TTCTT
T ss_pred EEEEECCEEEEEEEEe-CCCC--EEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCC----CCCcC
Confidence 9999888765 55553 2343 35899999999999999999999765432222122222223211 111 11122
Q ss_pred eEEEEeecCCeEEEEEecCCCCeEEEEEecCCCC-CCCCCCCHHHHHHHHH------HHhCCCC-------CcceEEEee
Q 005134 277 MLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQ-QNLEDFSPEICEKLIF------KLVGWEL-------SDIDVIDIK 342 (712)
Q Consensus 277 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~i~------~~~g~~~-------~~~~i~~~~ 342 (712)
..+..+.+.+..++++.. ++.+.+.+.+.... .......++.+.+++. +.+.... ..+.+. .
T Consensus 209 ~~~~~~~~~G~~~~~Pl~--~~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~--~ 284 (512)
T 3e1t_A 209 NILSAAFQDGWFWYIPLS--DTLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIR--K 284 (512)
T ss_dssp SEEEEEETTEEEEEEECS--SSEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEE--E
T ss_pred ceEEEEeCCceEEEEEeC--CCeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceee--c
Confidence 233334444444444443 33333322211110 1111112333333332 2222110 001110 1
Q ss_pred cceechhhhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCC-chhhHHHHHHhhhHHHHHHH
Q 005134 343 PWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIA-PASILNTYETERKPIAEFNT 421 (712)
Q Consensus 343 ~w~~~~~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a-~~~lL~sY~~eRrp~a~~~~ 421 (712)
.|. ....+|. .+||+|+|||||.++|+.|||+|+||+||..|+++|...+++.. .+.+|+.|+++|++....+.
T Consensus 285 ~~~---~~~~~~~--~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~~~~~~ 359 (512)
T 3e1t_A 285 DYS---YCNTSFW--KNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREYGNFY 359 (512)
T ss_dssp SCC---EEESCSB--CSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc---ccccccc--cCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHH
Confidence 111 1344555 48999999999999999999999999999999999999887653 35789999999999999888
Q ss_pred HHHHHHHHHh
Q 005134 422 ALSVQNFRAA 431 (712)
Q Consensus 422 ~~s~~~~~~~ 431 (712)
+.....|...
T Consensus 360 ~~~~~~y~~~ 369 (512)
T 3e1t_A 360 QFLVAFYDMN 369 (512)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhh
Confidence 8777665543
No 18
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=5.4e-33 Score=303.19 Aligned_cols=319 Identities=13% Similarity=0.085 Sum_probs=200.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHH-HH-HHhcCCCccccceeE
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLA-EE-IERSQPPVDLWRKFI 119 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~-d~-l~~~~~~~~~~~~~~ 119 (712)
+||+||||||+||++|+.|+++ |++|+||||.+.+...+++..+++++++.+... ++. +. +.....+. ....
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~ 76 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANP-LSYLDAPERLNPQFL---EDFK 76 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCG-GGGSSCGGGGCCEEE---CCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCc-chhhhhhHHHhhccc---cceE
Confidence 4799999999999999999999 999999999998877888999998887733332 443 33 32222111 1122
Q ss_pred eeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 120 ~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
+.. .|..+.. ........+.|..|.+.|.+.+.+.|+ +++++++|++
T Consensus 77 ~~~--~g~~~~~------------~~~~~~~~~~r~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~ 123 (381)
T 3c4a_A 77 LVH--HNEPSLM------------STGVLLCGVERRGLVHALRDKCRSQGI-------------------AIRFESPLLE 123 (381)
T ss_dssp EEE--SSSEEEC------------CCCSCEEEEEHHHHHHHHHHHHHHTTC-------------------EEETTCCCCS
T ss_pred EEe--CCeeEEe------------cCCCceeeecHHHHHHHHHHHHHHCCC-------------------EEEeCCEecc
Confidence 221 2333210 001123468899999999999998877 8999999988
Q ss_pred EEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhccc----CCCcccccccccEEEEEeecCccccccccCCC
Q 005134 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLV----GIDLVGEKDLQKLVSVHFLSKDLGDYLLNERP 275 (712)
Q Consensus 200 v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~l----gi~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~ 275 (712)
+++.. ++++|+||+|||.+|. |+.+ ++...+.. .. ..+...... . ..
T Consensus 124 i~~~~------------------~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~---~~--~~~~~~~~~----~-~~ 174 (381)
T 3c4a_A 124 HGELP------------------LADYDLVVLANGVNHK-TAHFTEALVPQVDYGR---NK--YIWYGTSQL----F-DQ 174 (381)
T ss_dssp GGGCC------------------GGGCSEEEECCGGGGG-TCCSSGGGCCCCEEEE---EE--EEEEEESSC----C-SS
T ss_pred chhcc------------------cccCCEEEECCCCCch-HHhhhhhcCCCcccCC---cc--EEEEecCCC----C-Cc
Confidence 75420 1369999999999999 9987 33322110 11 111110000 0 11
Q ss_pred ceEEEEeecCCeEEEEEecCCCCeEEEEEecCCCC---CCCCCCCHHHHHHHHHHHhCCCCCcceEEEee--cceec-hh
Q 005134 276 GMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQ---QNLEDFSPEICEKLIFKLVGWELSDIDVIDIK--PWVMH-AE 349 (712)
Q Consensus 276 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~--~w~~~-~~ 349 (712)
...++.+.+.+..++...+..++.+.+.+...+.. .....++++...+.+++.++......+++... .|... ..
T Consensus 175 ~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 254 (381)
T 3c4a_A 175 MNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGGHGLVSQPGLGWRNFMTL 254 (381)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTTCCCBCCTTTCSEEEEEC
T ss_pred ceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhcccCCCchhhcCCCcceeeeccc
Confidence 11122222322222112233334444333321110 12334565555555555443111112222211 35543 34
Q ss_pred hhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHHHHH
Q 005134 350 VAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (712)
Q Consensus 350 va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (712)
.+++|. .|||+|+|||||.|+|++|||+|+||+||.+|+|+|+.. ...+.+|++|+++|++++..++..+..+.+
T Consensus 255 ~~~~~~--~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~---~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~ 329 (381)
T 3c4a_A 255 SHDRCH--DGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE---DGVPAALKRFEERALPLVQLFRGHADNSRV 329 (381)
T ss_dssp CCSCSE--ETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS---SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcc--cCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 567887 499999999999999999999999999999999999873 345789999999999999999998877766
Q ss_pred Hhcc
Q 005134 430 AAME 433 (712)
Q Consensus 430 ~~~~ 433 (712)
.+..
T Consensus 330 ~~~~ 333 (381)
T 3c4a_A 330 WFET 333 (381)
T ss_dssp HHHT
T ss_pred hhhc
Confidence 5544
No 19
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.98 E-value=7.7e-31 Score=286.86 Aligned_cols=336 Identities=12% Similarity=0.105 Sum_probs=208.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCC-CCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeE
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST-HPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~-~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~ 119 (712)
|.++||+||||||+||++|+.|+++|++|+||||.+.+.. ..++..+++ ++++.+ |+.+..... ...+....
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~---~~~~~l-g~~~~~~~~---~~~~~~~~ 74 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEA-DIKADRSFI---ANEVKGAR 74 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHT-TCCCCTTTE---EEEESEEE
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCH---HHHHHc-CCCCChHHh---hhhcceEE
Confidence 3568999999999999999999999999999999986533 445555544 556666 663321110 01111111
Q ss_pred eeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 120 ~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
+ ....+.....+.... ..+...+.+++..|.+.|.+.+.+.|+ +++++++|++
T Consensus 75 ~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~ 127 (397)
T 3cgv_A 75 I-YGPSEKRPIILQSEK-------AGNEVGYVLERDKFDKHLAALAAKAGA-------------------DVWVKSPALG 127 (397)
T ss_dssp E-ECTTCSSCEEEC------------CCCEEEECHHHHHHHHHHHHHHHTC-------------------EEESSCCEEE
T ss_pred E-EcCCCCEEEEEeccc-------cCCceeEEEeHHHHHHHHHHHHHhCCC-------------------EEEECCEEEE
Confidence 1 112222211111100 012234678999999999999998887 9999999999
Q ss_pred EEEcCCeEE-EEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCc-ccccccccEEEEEeecCccccccccCCCce
Q 005134 200 VSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDL-VGEKDLQKLVSVHFLSKDLGDYLLNERPGM 277 (712)
Q Consensus 200 v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~-~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 277 (712)
++.+++.++ |++.. .+. ..+++||+||+|||.+|.+|+.+|++. ..... .....+.+..... ...+..
T Consensus 128 i~~~~~~v~gv~~~~--~~~--~~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~ 197 (397)
T 3cgv_A 128 VIKENGKVAGAKIRH--NNE--IVDVRAKMVIAADGFESEFGRWAGLKSVILARN-DIISALQYRMINV-----DVDPDY 197 (397)
T ss_dssp EEEETTEEEEEEEEE--TTE--EEEEEEEEEEECCCTTCHHHHHHTCCTTCCCGG-GEEEEEEEEEESC-----CCCTTE
T ss_pred EEEeCCEEEEEEEEE--CCe--EEEEEcCEEEECCCcchHhHHhcCCCccCCChh-heeEEEEEEeccC-----CCCCCc
Confidence 999988877 76653 222 358999999999999999999998765 32111 1111122211110 011223
Q ss_pred EEEEe---ecCCeEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHhCCCC--CcceEEE--eecceechhh
Q 005134 278 LFFIF---NTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWEL--SDIDVID--IKPWVMHAEV 350 (712)
Q Consensus 278 ~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~--~~~~i~~--~~~w~~~~~v 350 (712)
..+.+ .+....++++.. ++.+.+...+..... .......+.+++++...+ ...++.. ...+++. ..
T Consensus 198 ~~~~~~~~~~~g~~~~~P~~--~~~~~vg~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~-~~ 270 (397)
T 3cgv_A 198 TDFYLGSIAPAGYIWVFPKG--EGMANVGIGSSINWI----HNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVS-KV 270 (397)
T ss_dssp EEEECSTTSTTEEEEEEEEE--TTEEEEEEEEETTTC----SCHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECC-CC
T ss_pred EEEEeCCcCCCceEEEEECC--CCeEEEEEEeccccc----cCCCCHHHHHHHHHHhCcCCCCCeEEeeeeeeeecC-CC
Confidence 33333 244344445544 234433332222111 122333344444433211 1122222 2233332 34
Q ss_pred hccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHH-cCCCchhhHHHHHHhhhHHHHHHHHHHHHHHH
Q 005134 351 AEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVL-KDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (712)
Q Consensus 351 a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl-~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (712)
.++|. .+||+|+|||||.++|+.|+|+|+|++||..|+++|+..+ ++...+.+|+.|+++|++.....++.+....+
T Consensus 271 ~~~~~--~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~ 348 (397)
T 3cgv_A 271 KMPIT--MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLRNWVAKE 348 (397)
T ss_dssp CSCCE--ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccee--eCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56665 4999999999999999999999999999999999999877 56667899999999999988777776655433
No 20
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.98 E-value=9.8e-31 Score=291.92 Aligned_cols=332 Identities=14% Similarity=0.076 Sum_probs=206.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC--CCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeE
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS--THPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~--~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~ 119 (712)
+++||+||||||+||++|+.|+++|++|+||||.+.+. ...++..+ ++++|+++ |+.+.+... ....+....
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~l-g~~~~~~~~--~~~~~~~~~ 78 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKL-GMPYPKGEE--LENKINGIK 78 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHT-TCCCCCGGG--EEEEEEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHh-cCCCCchHH--HHhhhcceE
Confidence 46899999999999999999999999999999997642 23345455 45777777 654321110 000001111
Q ss_pred eeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 120 ~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
+. ...+... + ..+.....++|..|.+.|.+.+.+.|+ +++++++|++
T Consensus 79 ~~-~~~~~~~----------~---~~~~~~~~i~r~~l~~~L~~~a~~~gv-------------------~i~~~~~v~~ 125 (453)
T 3atr_A 79 LY-SPDMQTV----------W---TVNGEGFELNAPLYNQRVLKEAQDRGV-------------------EIWDLTTAMK 125 (453)
T ss_dssp EE-CTTSSCE----------E---EEEEEEEEECHHHHHHHHHHHHHHTTC-------------------EEESSEEEEE
T ss_pred EE-CCCCceE----------E---eECCCcEEEcHHHHHHHHHHHHHHcCC-------------------EEEeCcEEEE
Confidence 11 1111100 0 001224578999999999999998876 9999999999
Q ss_pred EEEcCCeEE-EEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCccc--cccc---ccEEEEEeecCccccccccC
Q 005134 200 VSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVG--EKDL---QKLVSVHFLSKDLGDYLLNE 273 (712)
Q Consensus 200 v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g--~~~~---~~~~~~~~~~~~l~~~~~~~ 273 (712)
++++++.++ |++....+|+ ..+++||+||+|||.+|.+|+.++..... .... ...+...+..... ..
T Consensus 126 i~~~~~~v~gv~~~~~~~G~--~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 198 (453)
T 3atr_A 126 PIFEDGYVKGAVLFNRRTNE--ELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKED-----IE 198 (453)
T ss_dssp EEEETTEEEEEEEEETTTTE--EEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSC-----CT
T ss_pred EEEECCEEEEEEEEEcCCCc--eEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCC-----cc
Confidence 999888876 5665321342 35799999999999999999999876421 1111 1111111111110 01
Q ss_pred CCceEEEEee----cCCeEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHhCCCCCcceEEEeecce-ech
Q 005134 274 RPGMLFFIFN----TEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWV-MHA 348 (712)
Q Consensus 274 ~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~-~~~ 348 (712)
.+....++++ +++..++++... +.+.+.+.+...... .+ ..+.+.+.+++... .....++.....+. ...
T Consensus 199 ~~~~~~~~~~~~~~~~g~~~~~P~~~--~~~~vg~~~~~~~~~-~~-~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~p~~ 273 (453)
T 3atr_A 199 DHDYLRIFIDQETSPGGYWWYFPKGK--NKVNVGLGIQGGMGY-PS-IHEYYKKYLDKYAP-DVDKSKLLVKGGALVPTR 273 (453)
T ss_dssp TTTEEEEECCTTTSTTSCEEEEEEET--TEEEEEEEEESSSCC-CC-HHHHHHHHHHHHCT-TEEEEEEEEEEEEEEECS
T ss_pred CCCeEEEEECCCCCCCcEEEEEECCC--CeEEEEEEecCCCCC-CC-HHHHHHHHHHhhhh-hcCCCeEEeccceeccCC
Confidence 1223223332 344455555542 344443322111111 11 23455556655322 11122333322222 223
Q ss_pred hhhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHc-CCCchhhHHHHHHhhhHHHHHHHHHHHH
Q 005134 349 EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK-DIAPASILNTYETERKPIAEFNTALSVQ 426 (712)
Q Consensus 349 ~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~-g~a~~~lL~sY~~eRrp~a~~~~~~s~~ 426 (712)
...++|. .+||+|+|||||.++|+.|||+|+||+||.+||++|+..++ +...+.+|+.|+++|++.....+..+..
T Consensus 274 ~~~~~~~--~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~ 350 (453)
T 3atr_A 274 RPLYTMA--WNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLDI 350 (453)
T ss_dssp SCCSCSE--ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHHTHHHHHHHHH
T ss_pred CCCCcee--cCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566776 49999999999999999999999999999999999998775 5445789999999999999877766543
No 21
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.97 E-value=7.1e-31 Score=300.61 Aligned_cols=345 Identities=15% Similarity=0.181 Sum_probs=219.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
|.++||+||||||+|+++|+.|+++|++|+||||.+.+.. ..+..+++.++++|+.+ |+.+.+...+........+.+
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~-~~G~~l~p~~~~~l~~l-Gl~~~l~~~~~~~~~~~~~~~ 98 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY-RVGESLLPGTMSILNRL-GLQEKIDAQNYVKKPSATFLW 98 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC-CCCCBCCHHHHHHHHHT-TCHHHHHHHCCEEECEEEEEC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC-ceeeeECHHHHHHHHHc-CCcHHHHhcCCcccCCcEEEe
Confidence 5579999999999999999999999999999999976543 34788999999999999 999998877654322122221
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
. .+............ ... ......+++++..|...|.+.+.+.|+ +++++++|+++
T Consensus 99 ~---~~~~~~~~~~~~~~-~~~-~~~~~~~~v~r~~l~~~L~~~a~~~Gv-------------------~i~~g~~V~~v 154 (591)
T 3i3l_A 99 G---QDQAPWTFSFAAPK-VAP-WVFDHAVQVKREEFDKLLLDEARSRGI-------------------TVHEETPVTDV 154 (591)
T ss_dssp S---SSCCCEEEECCCC---CT-TCCSCEEECCHHHHHHHHHHHHHHTTC-------------------EEETTCCEEEE
T ss_pred c---CCCccceeeccccc-ccc-cccCeeEEEcHHHHHHHHHHHHHhCCC-------------------EEEeCCEEEEE
Confidence 1 11111111111000 000 011224678999999999999998887 99999999999
Q ss_pred EEc-CCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeecCccccccccCCCceEE
Q 005134 201 SAT-DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (712)
Q Consensus 201 ~~~-~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (712)
+.+ ++.+.|++.. +|+ ..+++||+||+|||.+|.+|+.+++...........+...+..... .........+
T Consensus 155 ~~~~g~~~~V~~~~--~G~--~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~---~~~~~~~~~~ 227 (591)
T 3i3l_A 155 DLSDPDRVVLTVRR--GGE--SVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDP---FEGDLKGTTY 227 (591)
T ss_dssp ECCSTTCEEEEEEE--TTE--EEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCS---CCSTTTTCEE
T ss_pred EEcCCCEEEEEEec--CCc--eEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCcc---ccCCCCCceE
Confidence 876 5566666652 442 3579999999999999999999987643221111112222322110 0111222334
Q ss_pred EEeecCCeEEEEEecCCCCeEEEEEecCCCCC-CCCCCCHHHHHHHHHHHhCCCC----------CcceEEEeecceech
Q 005134 280 FIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQ-NLEDFSPEICEKLIFKLVGWEL----------SDIDVIDIKPWVMHA 348 (712)
Q Consensus 280 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~i~~~~g~~~----------~~~~i~~~~~w~~~~ 348 (712)
..+.+.+..++++.. ++.+.+.+...+... .....+.+ ++++++....+ ...+......|..
T Consensus 228 ~~~~~~G~~w~iPl~--~~~~sv~~~~~~~~~~~l~~~~~~---~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~-- 300 (591)
T 3i3l_A 228 SITFEDGWVWMIPIK--DDLYSVGLVVDRSKSAEVREQGAD---AFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSY-- 300 (591)
T ss_dssp EEEETTEEEEEEECS--SSEEEEEEEEEGGGHHHHHHHCHH---HHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEEE--
T ss_pred EEEcCCcEEEEEECC--CCeEEEEEEcCHHHHhhhccCCHH---HHHHHHHHhCHHHHHHHhcCccccCceEeccccc--
Confidence 444455444444443 344444332111100 00001112 22222221110 0000111122322
Q ss_pred hhhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCC-chhhHHHHHHhhhHHHHHHHHHHHHH
Q 005134 349 EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIA-PASILNTYETERKPIAEFNTALSVQN 427 (712)
Q Consensus 349 ~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a-~~~lL~sY~~eRrp~a~~~~~~s~~~ 427 (712)
.+.+|. .+||+|+|||||.++|+.|||+|+|++||..|+++|...+.+.. .+.+++.|+++|++....+.+.....
T Consensus 301 -~~~~~~--~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~~~~i~~~~~~~ 377 (591)
T 3i3l_A 301 -DTEVFS--ADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREAYEQYHQFLASF 377 (591)
T ss_dssp -EESCSE--ETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -chhhcc--cCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345665 49999999999999999999999999999999999998876543 45689999999999999999888877
Q ss_pred H
Q 005134 428 F 428 (712)
Q Consensus 428 ~ 428 (712)
|
T Consensus 378 Y 378 (591)
T 3i3l_A 378 Y 378 (591)
T ss_dssp H
T ss_pred H
Confidence 7
No 22
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.97 E-value=3.8e-30 Score=284.00 Aligned_cols=342 Identities=14% Similarity=0.121 Sum_probs=215.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
+.++||+||||||+||++|+.|+++|++|+||||.+.+. ...+..++++++++++.+ |+.+.+.+.+.+......+
T Consensus 3 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~-~~~g~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~-- 78 (421)
T 3nix_A 3 REKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR-FVIGESLLPRCMEHLDEA-GFLDAVKAQGFQQKFGAKF-- 78 (421)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCGGGHHHHHHT-TCHHHHHHTTCEEECEEEE--
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-CcccCcccHhHHHHHHHc-CChHHHHHcCCcccCCcEE--
Confidence 456899999999999999999999999999999997655 356788999999999999 9999998876543221111
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
. .+.....++..... . ..+...+.++|..|.+.|.+.+.+.|+ +++++++|+++
T Consensus 79 ~---~~~~~~~~~~~~~~--~--~~~~~~~~~~r~~~~~~L~~~a~~~gv-------------------~i~~~~~v~~i 132 (421)
T 3nix_A 79 V---RGKEIADFNFSDQF--S--NGWNWTWQVPRGNFDKTLADEAARQGV-------------------DVEYEVGVTDI 132 (421)
T ss_dssp E---ETTEEEEEETTSCS--S--CSCCCEEECCHHHHHHHHHHHHHHHTC-------------------EEECSEEEEEE
T ss_pred E---eCCeeEEEeehhhc--C--CCCCceeEECHHHHHHHHHHHHHhCCC-------------------EEEcCCEEEEE
Confidence 1 11222222211110 0 112234678999999999999998887 99999999999
Q ss_pred EEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeecCccccccccCCCceEEE
Q 005134 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFF 280 (712)
Q Consensus 201 ~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 280 (712)
+.+++++.+++... +|+ +++++||+||+|||.+|.+|+.+|++..........+...+......... .. ....++
T Consensus 133 ~~~~~~~~v~v~~~-~g~--~~~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~ 207 (421)
T 3nix_A 133 KFFGTDSVTTIEDI-NGN--KREIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAA-EM-EGNRIT 207 (421)
T ss_dssp EEETTEEEEEEEET-TSC--EEEEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC------CCSEEE
T ss_pred EEeCCEEEEEEEcC-CCC--EEEEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCcc-CC-CCeEEE
Confidence 99988887777643 443 45799999999999999999999987654433333343333321111000 11 112222
Q ss_pred EeecCCeEEEEEecCCCCeEEEEEecCCCC-CCCCCCCHHHHHHHHHHHhCCC--CCcceE-EEeecceechhhhccccc
Q 005134 281 IFNTEAIGVLVAHDLKEGEFILQVPFYPPQ-QNLEDFSPEICEKLIFKLVGWE--LSDIDV-IDIKPWVMHAEVAEKFLC 356 (712)
Q Consensus 281 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~i~~~~g~~--~~~~~i-~~~~~w~~~~~va~~~~~ 356 (712)
+......+++...+..++...+.+...+.. .....-.++.+.+++....... ....+. .....|........++.
T Consensus 208 ~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~- 286 (421)
T 3nix_A 208 AVVHKPKVWIWVIPFSNGNTSVGFVGEPSYFDEYTGTPEERMRAMIANEGHIAERFKSEEFLFEPRTIEGYAISASKLY- 286 (421)
T ss_dssp EEEEETTEEEEEEECTTSEEEEEEEECHHHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEECCCBEESCSE-
T ss_pred EEeCCCCEEEEEEEECCCCEEEEEEecHHHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCccccCceeecccceeeeeec-
Confidence 221111233333333344444433221111 0111112222333332210000 000000 01122233333445565
Q ss_pred cCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHH
Q 005134 357 CYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFN 420 (712)
Q Consensus 357 ~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~ 420 (712)
.+|++|+|||||.++|+.|+|+|+|++||..|++.|+..+++. ....++.|+++++......
T Consensus 287 -~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~-~~~~~~~y~~~~~~~~~~~ 348 (421)
T 3nix_A 287 -GDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGE-EVNWEKDFVEHMMQGIDTF 348 (421)
T ss_dssp -ETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTC-CCCHHHHTHHHHHHHHHHH
T ss_pred -cCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHH
Confidence 4999999999999999999999999999999999999988764 3457889999988765433
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.97 E-value=3.7e-30 Score=292.55 Aligned_cols=344 Identities=13% Similarity=0.124 Sum_probs=210.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHh------------CCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHH--HH
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTK------------LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEE--IE 106 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar------------~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~--l~ 106 (712)
+..+||+||||||+|+++|+.|++ .|++|+||||.+.+.... +..+.++++++|+.+ |+.+. +.
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~-g~~~~p~~~~~l~~l-Gi~e~~~~~ 82 (526)
T 2pyx_A 5 KPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGV-GEGTWPSMRSTLSKI-GIDENDFIR 82 (526)
T ss_dssp SCCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCS-CEECCTHHHHHHHHH-TCCHHHHHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcce-eeechHhHHHHHHHc-CCCHHHHHH
Confidence 456899999999999999999999 999999999977654433 788999999999999 99886 66
Q ss_pred hcCCCccc------cce-------eEeeecCC-CCeeeeecCC-------Cc-------------------------ccc
Q 005134 107 RSQPPVDL------WRK-------FIYCTSVT-GPILGSVDHM-------QP-------------------------QDF 140 (712)
Q Consensus 107 ~~~~~~~~------~~~-------~~~~~~~~-G~~l~~~~~~-------~~-------------------------~~~ 140 (712)
+.+..... |.. ..+.+... |..+...+.. .. ..+
T Consensus 83 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~ 162 (526)
T 2pyx_A 83 QCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQY 162 (526)
T ss_dssp HTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTT
T ss_pred HcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhcccc
Confidence 55433211 110 01111110 1000000000 00 000
Q ss_pred ccccCCccccccChhHHHHHHHHHHHh-cCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCce
Q 005134 141 EKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKC 219 (712)
Q Consensus 141 ~~~~~p~~~~~i~q~~Le~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~ 219 (712)
. ......++++|..|.+.|.+.+.+ .|+ +++++ +|++++++++++.+.+... +|.
T Consensus 163 ~--~~~~~~~~~~r~~l~~~L~~~a~~~~Gv-------------------~i~~~-~v~~i~~~~~g~~~~v~~~-~g~- 218 (526)
T 2pyx_A 163 H--FQNNYGYHLNAAKFSQLLTEHCTQKLGV-------------------THIRD-HVSQIINNQHGDIEKLITK-QNG- 218 (526)
T ss_dssp C--CSSCCEEEECHHHHHHHHHHHHHHTSCC-------------------EEEEC-CEEEEEECTTSCEEEEEES-SSC-
T ss_pred C--CCCCeeEEEcHHHHHHHHHHHHHhcCCC-------------------EEEEe-EEEEEEecCCCcEEEEEEC-CCC-
Confidence 0 111224678999999999999998 787 89999 6999998776654455433 342
Q ss_pred eeEEEEecEEEeccCCCchh-hcccCCCcccccc---cccEEEEEeecCccccccccCCCceEEEEeecCCeEEEEEecC
Q 005134 220 TERNIQCNILIGTDGAGSTV-RKLVGIDLVGEKD---LQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDL 295 (712)
Q Consensus 220 ~~~~i~ad~VVgADG~~S~V-R~~lgi~~~g~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 295 (712)
+++||+||+|||.+|.+ |+.+|+++.+... ....+.+......... ...+.. ...+.+.+..++++..
T Consensus 219 ---~i~ad~vV~AdG~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~g~~~~~pl~- 290 (526)
T 2pyx_A 219 ---EISGQLFIDCTGAKSLLLGEHLQVPFLSQKSVLFNDRALAIQVPYSDANS---PIASCT-HSTAQPNGWIWDIGLP- 290 (526)
T ss_dssp ---EEECSEEEECSGGGCCCCCCCTCCCEEECHHHHCCCEEEEEEEECSSTTC---CCCSSE-EEEEETTEEEEEEECS-
T ss_pred ---EEEcCEEEECCCcchHHHHHHhCCCcccccccccCccEEEEEeeccCCCC---CCCCce-eEEecCCCeEEEeeCC-
Confidence 48999999999999999 6778877643321 1122222222110000 011111 1223333333334332
Q ss_pred CCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHhCCCCCcceEEEeecceechhhhccccccCCcEEEEccCCccCCCCC
Q 005134 296 KEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAG 375 (712)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~~~~~va~~~~~~~gRV~LvGDAAH~~~P~g 375 (712)
....+..+ +.+. ..+++...+.+++.+......++......|.+.....++|. .|||+|+|||||.++|+.
T Consensus 291 -~~~~~~~v-~~~~-----~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~--~grv~LiGDAAh~~~P~~ 361 (526)
T 2pyx_A 291 -TRKGVGYV-YSSS-----HTNDIDAQKTLFNYLGVDGAAADKLEPRQLAINPGYRAKCW--QNNCIAIGMAAGFIEPLE 361 (526)
T ss_dssp -SEEEEEEE-ECTT-----TCCHHHHHHHHHHHHTCCHHHHHHCCCEEEECCCEEESCSE--ETTEEECGGGTEECCCTT
T ss_pred -CceEEEEE-ecCC-----CCChHHHHHHHHHHHHhcCcccccCCceEEecccCcccccc--CCCEEEEEhhhcccCccc
Confidence 22222211 1111 12445555666665532111111011223344444456665 499999999999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHHHHH
Q 005134 376 GFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (712)
Q Consensus 376 G~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (712)
|+|+|+||+||..|+..|... +...+.+|++|+++|+++.+++.+....++.
T Consensus 362 GqGi~~ai~da~~La~~L~~~--~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 413 (526)
T 2pyx_A 362 ASALALIEWTASTLAQQLPPN--RMVMDTISARVNERYQQHWQQIIDFLKLHYV 413 (526)
T ss_dssp CHHHHHHHHHHHHHHHTCCSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhhhc--CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888776421 1224689999999999999988876655554
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.97 E-value=1.7e-28 Score=281.54 Aligned_cols=332 Identities=15% Similarity=0.099 Sum_probs=194.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhC------CCCEEEEcCCCCCCCC-CceeecCHhHHHHHHhhhcHHHHHHhcCCCcc
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKL------GIKCSVLEKNKAFSTH-PQAHFINNRYALVFRKLDGLAEEIERSQPPVD 113 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~------Gi~v~lvEr~~~~~~~-~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~ 113 (712)
.+++||+||||||+||++|+.|+++ |++|+||||.+.+..+ .++..+++++++.| + +- +.+.+.+..
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l-~~---~~~~g~~~~ 106 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--F-PD---WKEKGAPLN 106 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--C-TT---HHHHTCCCC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--H-HH---HHhcCCcee
Confidence 3568999999999999999999999 9999999999876543 45677899998876 3 21 222333332
Q ss_pred cc---ceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccce
Q 005134 114 LW---RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGRE 190 (712)
Q Consensus 114 ~~---~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 190 (712)
.. ..+.+... .+ .+ .++...... ......+.++|..|++.|.+.+++.|+ +
T Consensus 107 ~~~~~~~~~~~~~-~~-~~-~~~~~~~~~----~~~~~~~~v~r~~l~~~L~~~a~~~Gv-------------------~ 160 (584)
T 2gmh_A 107 TPVTEDRFGILTE-KY-RI-PVPILPGLP----MNNHGNYVVRLGHLVSWMGEQAEALGV-------------------E 160 (584)
T ss_dssp EECCEEEEEEECS-SC-EE-ECCCCTTST----TCCTTCEECCHHHHHHHHHHHHHHTTC-------------------E
T ss_pred eeechhheeeecc-CC-Cc-cccccCccc----cccCCCEEEeHHHHHHHHHHHHHHcCC-------------------E
Confidence 10 11222111 11 11 111000000 111224568899999999999998887 9
Q ss_pred EEeCcEEEEEEEcCCe-EE-EEEEec---cCCcee-----eEEEEecEEEeccCCCchhhccc----CCCccccc-cccc
Q 005134 191 ILMGHECVSVSATDQC-IN-VIASFL---KEGKCT-----ERNIQCNILIGTDGAGSTVRKLV----GIDLVGEK-DLQK 255 (712)
Q Consensus 191 v~~g~~v~~v~~~~~~-v~-v~v~~~---~~g~~~-----~~~i~ad~VVgADG~~S~VR~~l----gi~~~g~~-~~~~ 255 (712)
|+++++++++.+++++ |+ |++.+. .+|+.. ..+++||+||+|||++|.||+++ ++...... .+..
T Consensus 161 i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~ 240 (584)
T 2gmh_A 161 VYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI 240 (584)
T ss_dssp EETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEE
T ss_pred EEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHh
Confidence 9999999999988754 43 443210 133200 13799999999999999999887 65532211 1111
Q ss_pred EEEEEeecCccccccccCCCceEEEEee----cC--CeEEEEEecCCCCeEEEEEecCCCCCCCCCCC-HHHHHHHH---
Q 005134 256 LVSVHFLSKDLGDYLLNERPGMLFFIFN----TE--AIGVLVAHDLKEGEFILQVPFYPPQQNLEDFS-PEICEKLI--- 325 (712)
Q Consensus 256 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~i--- 325 (712)
.+...+..+ .. ...++...+.+. .. ..+++++....++.+.+.+........ ...+ .+.+.+++
T Consensus 241 g~~~~~~v~-~~----~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~-~~~~~~~~l~~~~~~p 314 (584)
T 2gmh_A 241 GLKELWVID-EK----KWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQN-PYLSPFREFQRWKHHP 314 (584)
T ss_dssp EEEEEEECC-GG----GCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCC-TTCCHHHHHHHHTTST
T ss_pred hhhhheecC-cc----cccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCccc-ccCChHHHHHHHHhCh
Confidence 111112111 11 112333222221 11 123444333103455444322111111 1112 22332221
Q ss_pred --HHHhCCCCCcceEEEe---ecceechhhhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHc-C
Q 005134 326 --FKLVGWELSDIDVIDI---KPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK-D 399 (712)
Q Consensus 326 --~~~~g~~~~~~~i~~~---~~w~~~~~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~-g 399 (712)
+..+.. .++... ..|......+++|. .+||+|+|||||.++|+.|||+|+||+||.+|||+|+.+++ +
T Consensus 315 ~i~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~--~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g 388 (584)
T 2gmh_A 315 SIKPTLEG----GKRIAYGARALNEGGFQSIPKLT--FPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSE 388 (584)
T ss_dssp TTHHHHTT----CEEEEEEEEEEECCGGGGCCCCE--ETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhCC----CeEEEecceEccCCCcccCCccc--cCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcC
Confidence 112211 122211 11223344567776 49999999999999999999999999999999999999885 4
Q ss_pred C-Cchh---hHHHHHHhhhHH
Q 005134 400 I-APAS---ILNTYETERKPI 416 (712)
Q Consensus 400 ~-a~~~---lL~sY~~eRrp~ 416 (712)
. ..+. +|++|+++|++.
T Consensus 389 ~~~~~~a~~~L~~Ye~~r~~~ 409 (584)
T 2gmh_A 389 NLQSKTIGLHVTEYEDNLKNS 409 (584)
T ss_dssp CCCCSSSSCCCTHHHHHHHTS
T ss_pred CcchhhhhhhHHHHHHHHHHh
Confidence 2 3345 499999999976
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.96 E-value=3.1e-27 Score=269.30 Aligned_cols=340 Identities=13% Similarity=0.110 Sum_probs=206.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCCCCCCCceeecCHhHHH-HHHhhhcHHHH--HHhcCCCccc
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAFSTHPQAHFINNRYAL-VFRKLDGLAEE--IERSQPPVDL 114 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar---~Gi~v~lvEr~~~~~~~~ra~~i~~rtme-ilr~l~Gl~d~--l~~~~~~~~~ 114 (712)
+..+||+||||||+|+++|+.|++ .|++|+||||...+... .+..+.+++++ +++.+ |+.+. +.........
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~-~g~~~~~~~~~~~l~~l-G~~~~~~~~~~~~~~~~ 80 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIG-VGEATIPSLQKVFFDFL-GIPEREWMPQVNGAFKA 80 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCC-SCEECCTHHHHHTHHHH-TCCHHHHGGGGTCEEEC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcC-CCcccchhHHHHHHHHh-CCCHHHHHHhcCchhhC
Confidence 345899999999999999999999 99999999997654433 37788899999 99999 88764 4443322210
Q ss_pred ------cce-------eEeeecCCCCee--eeec-------------CCC----------cccc-------ccccCCccc
Q 005134 115 ------WRK-------FIYCTSVTGPIL--GSVD-------------HMQ----------PQDF-------EKVVSPVSV 149 (712)
Q Consensus 115 ------~~~-------~~~~~~~~G~~l--~~~~-------------~~~----------~~~~-------~~~~~p~~~ 149 (712)
|.. ..+... .|... ...+ ... ..++ .........
T Consensus 81 g~~~~~w~~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 159 (538)
T 2aqj_A 81 AIKFVNWRKSPDPSRDDHFYHL-FGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHA 159 (538)
T ss_dssp EEEEESCSSSCCTTSCCEEEEE-SSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCE
T ss_pred CccccCcCcccccCCCCceECC-CCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCcc
Confidence 100 000000 11000 0000 000 0000 000001124
Q ss_pred cccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEE
Q 005134 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNIL 229 (712)
Q Consensus 150 ~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~V 229 (712)
.++++..|...|.+.+.+.|+ +++++ +|++++.++++..+.+... +|+ +++||+|
T Consensus 160 ~~i~~~~l~~~L~~~a~~~gv-------------------~~~~~-~v~~i~~~~~g~~~~v~~~-~g~----~i~ad~v 214 (538)
T 2aqj_A 160 WHFDAHLVADFLKRWAVERGV-------------------NRVVD-EVVDVRLNNRGYISNLLTK-EGR----TLEADLF 214 (538)
T ss_dssp EEECHHHHHHHHHHHHHHTTC-------------------EEEEC-CEEEEEECTTSCEEEEEET-TSC----EECCSEE
T ss_pred EEEeHHHHHHHHHHHHHHCCC-------------------EEEEe-eEeEEEEcCCCcEEEEEEC-CCc----EEEeCEE
Confidence 678999999999999998887 89999 8999998766543344432 442 6899999
Q ss_pred EeccCCCchhh-cccCCCcccccc---cccEEEEEeecCccccccccCCCceEEEEeecCCeEEEEEecCCCCeEEEEEe
Q 005134 230 IGTDGAGSTVR-KLVGIDLVGEKD---LQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVP 305 (712)
Q Consensus 230 VgADG~~S~VR-~~lgi~~~g~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 305 (712)
|+|||.+|.+| +.+|+.+.+... ....+.+...... .. ....+.. ...+.+.+..++++... ...+...
T Consensus 215 V~A~G~~s~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~-~~~~~~~g~~~~~p~~~---~~~~g~v 287 (538)
T 2aqj_A 215 IDCSGMRGLLINQALKEPFIDMSDYLLCDSAVASAVPNDD--AR-DGVEPYT-SSIAMNSGWTWKIPMLG---RFGSGYV 287 (538)
T ss_dssp EECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCH--HH-HCCCSSE-EEEECSSEEEEEEEETT---EEEEEEE
T ss_pred EECCCCchhhHHHHhCCCccccccccccceEEEEecccCC--cc-cCCCCce-eeeecCCceEEEecCCC---ceEEEEE
Confidence 99999999995 456776543321 1122222222110 00 0011111 11233333334444432 2222222
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHhCCCCCcceEEEeecceechhhhccccccCCcEEEEccCCccCCCCCCcchhhHHHH
Q 005134 306 FYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQD 385 (712)
Q Consensus 306 ~~~~~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~~~~~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~D 385 (712)
+.. ...+++...+.+++.++..+. .....|.+.....++|. .|||+|+|||||.++|+.|+|+|+||+|
T Consensus 288 ~~~-----~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~--~grvvliGDAAh~~~P~~gqG~~~a~~d 356 (538)
T 2aqj_A 288 FSS-----HFTSRDQATADFLKLWGLSDN----QPLNQIKFRVGRNKRAW--VNNCVSIGLSSCFLEPLESTGIYFIYAA 356 (538)
T ss_dssp ECT-----TTSCHHHHHHHHHHHHTCCTT----CCCEEEECCCEEESCSE--ETTEEECGGGTEECCGGGSCHHHHHHHH
T ss_pred EcC-----CCCChHHHHHHHHHHhcCCCC----CCceEEeeccccccccc--cCCEEEEcccccccCcchhccHHHHHHH
Confidence 211 122455666777777754321 11122333333455565 4999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHHHHH
Q 005134 386 AHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (712)
Q Consensus 386 A~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (712)
|..|+..|. .+...+.+|+.|+++|+++.+++.+....++.
T Consensus 357 a~~La~~L~---~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 397 (538)
T 2aqj_A 357 LYQLVKHFP---DTSFDPRLSDAFNAEIVHMFDDCRDFVQAHYF 397 (538)
T ss_dssp HHHHHHTCC---BTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999997764 34456789999999999999887776555553
No 26
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.96 E-value=1.2e-28 Score=277.78 Aligned_cols=307 Identities=21% Similarity=0.230 Sum_probs=195.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEee
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~ 121 (712)
..+||+||||||+||++|+.|+++|++|+||||.+.+.. .+...+.+++++.|+.+ |+.+.... +
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~-~~~~~~~~~~~~~l~~~-g~~~~~~~----------~--- 155 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR-HNVLHLWPFTIHDLRAL-GAKKFYGR----------F--- 155 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC-CCEEECCHHHHHHHHTT-THHHHCTT----------T---
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC-CCcccCChhHHHHHHHc-CCcccccc----------c---
Confidence 458999999999999999999999999999999987642 35677889999999998 88643100 0
Q ss_pred ecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEE
Q 005134 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (712)
Q Consensus 122 ~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~ 201 (712)
. ......++|..|++.|.+.+.+.|+ +|+++++|++++
T Consensus 156 ---~--------------------~~~~~~~~~~~l~~~L~~~~~~~gv-------------------~v~~~~~v~~i~ 193 (497)
T 2bry_A 156 ---C--------------------TGTLDHISIRQLQLLLLKVALLLGV-------------------EIHWGVKFTGLQ 193 (497)
T ss_dssp ---T--------------------CTTCCEEEHHHHHHHHHHHHHHTTC-------------------EEEESCEEEEEE
T ss_pred ---c--------------------ccccccCCHHHHHHHHHHHHHhCCC-------------------EEEeCCEEEEEE
Confidence 0 0001246788999999999988776 999999999998
Q ss_pred Ec---CCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcccccccccEEEEEeecCccccccccCCCceE
Q 005134 202 AT---DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGML 278 (712)
Q Consensus 202 ~~---~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 278 (712)
++ ++++++++....+|+ ..++++|+||+|||++|.+|+..++++.|...+.....+... ..+.........+..
T Consensus 194 ~~~~~~~~~~v~~~~~~~g~--~~~i~ad~VV~A~G~~S~~r~~~~~~~~g~~~~~~~~~l~~~-~~~~~~~~~~~~G~~ 270 (497)
T 2bry_A 194 PPPRKGSGWRAQLQPNPPAQ--LASYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITANFVNG-RTVEETQVPEISGVA 270 (497)
T ss_dssp CCCSTTCCBEEEEESCCCHH--HHTCCBSEEEECCCTTCCCTTCEEEEEECSCCEEEEEEEECC-CCHHHHTSCCBCC--
T ss_pred EecCCCCEEEEEEEECCCCC--EEEEEcCEEEECCCCCcccccccchhhcCceeEeeeeeeeee-ccccccchhhcCceE
Confidence 75 356667665221331 236899999999999999998888777776543322221111 000000000011111
Q ss_pred EEEeecC-----------CeEEEEEecCCCCeEEEEE-ecC------------CCC-C---CCCCCCHHHHH-------H
Q 005134 279 FFIFNTE-----------AIGVLVAHDLKEGEFILQV-PFY------------PPQ-Q---NLEDFSPEICE-------K 323 (712)
Q Consensus 279 ~~~~~~~-----------~~g~~~~~~~~~~~~~~~~-~~~------------~~~-~---~~~~~~~e~~~-------~ 323 (712)
+ .+++. ...-++..+. +.+.+.. +.. .+. . .....+.+.+. +
T Consensus 271 ~-~~~~~~f~~~~~~~Gi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 347 (497)
T 2bry_A 271 R-IYNQKFFQSLLKATGIDLENIVYYKD--ETHYFVMTAKKQCLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAAD 347 (497)
T ss_dssp ---CCSSHHHHHHHHHCCCEEEEEEEES--SEEEEEEEECHHHHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHHH
T ss_pred E-ecChhhhHhHHhhcCCCcccccccCC--CeEEEEeccccccccccceeeccccchHhhhhhccCCHHHHHHhhccccc
Confidence 1 11110 0011111111 1111111 100 000 0 00112222111 1
Q ss_pred HH--------H---HHhCCCCCcc-eEEEeecceechhhhccccccCCc-EEEEccCCc-cCCCCCCcchhhHHHHHHHH
Q 005134 324 LI--------F---KLVGWELSDI-DVIDIKPWVMHAEVAEKFLCCYNQ-IILAGDACH-RFPPAGGFGMNTGVQDAHNL 389 (712)
Q Consensus 324 ~i--------~---~~~g~~~~~~-~i~~~~~w~~~~~va~~~~~~~gR-V~LvGDAAH-~~~P~gG~G~n~gi~DA~~L 389 (712)
+- + ..+|.+...+ ++.....|++..+++++|+. || |+|+||||| .++| +|||+|+||+||.+|
T Consensus 348 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~a~~~~~--gRr~~l~Gda~~~~~~p-~g~G~n~g~~~a~~l 424 (497)
T 2bry_A 348 FATHGKLGKLEFAQDARGRPDVAAFDFTSMMRAESSARVQEKHGA--RLLLGLVGDCLVEPFWP-LGTGVARGFLAAFDA 424 (497)
T ss_dssp HHTTTTTCSCCBCBCTTSSBCEEEEECSEEEEESCSEEEEEETTE--EEEEEECGGGTBCCCGG-GCCHHHHHHHHHHHH
T ss_pred cchhhccccchhhhhccCCCCCceeeeEEEEecchhhHHHHhcCC--cccceEeccccccCcCc-cccchhhHHHHHHHH
Confidence 11 1 1122221222 44566789999999999984 88 999999999 5666 999999999999999
Q ss_pred HHHHHHHHcCCCchhhHHHHHHhhhHHHH
Q 005134 390 AWKIASVLKDIAPASILNTYETERKPIAE 418 (712)
Q Consensus 390 awkLa~vl~g~a~~~lL~sY~~eRrp~a~ 418 (712)
+|+|+.+++|.+...+| .||+++++
T Consensus 425 ~~~l~~~~~g~~~~~~l----~~r~~~~~ 449 (497)
T 2bry_A 425 AWMVKRWAEGAGPLEVL----AERESLYQ 449 (497)
T ss_dssp HHHHHHHHTTCCHHHHH----HHHHHHHT
T ss_pred HHHHHHHhCCCCccchh----hhHHHHhh
Confidence 99999999999888888 89999775
No 27
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.96 E-value=4.4e-27 Score=266.40 Aligned_cols=336 Identities=13% Similarity=0.112 Sum_probs=203.9
Q ss_pred cCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHH--HHhcCCCccc----
Q 005134 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEE--IERSQPPVDL---- 114 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar---~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~--l~~~~~~~~~---- 114 (712)
+||+||||||+|+++|+.|++ +|++|+||||.+.+. .+.+..+.+.++++++.+ |+.+. +.........
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~-~~~g~~~~~~~~~~l~~l-gi~~~~~~~~~~~~~~~~~~~ 80 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRR-IGVGEATFSTVRHFFDYL-GLDEREWLPRCAGGYKLGIRF 80 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHH-TCCHHHHHHHTTCEEECEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCc-eeeccccCcchHHHHHHc-CCCHHHHHHHcCCeEecccee
Confidence 799999999999999999999 999999999986543 334677889999999999 98775 5554422211
Q ss_pred --cce--eEeeecCC------CCee------------e------------eecCCC----cccc----c------c--cc
Q 005134 115 --WRK--FIYCTSVT------GPIL------------G------------SVDHMQ----PQDF----E------K--VV 144 (712)
Q Consensus 115 --~~~--~~~~~~~~------G~~l------------~------------~~~~~~----~~~~----~------~--~~ 144 (712)
|.. ..+.+... +..+ . ...... ...+ . . ..
T Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 160 (511)
T 2weu_A 81 ENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQ 160 (511)
T ss_dssp ESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGC
T ss_pred cCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccC
Confidence 100 00011000 0000 0 000000 0001 0 0 00
Q ss_pred C--CccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeE
Q 005134 145 S--PVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTER 222 (712)
Q Consensus 145 ~--p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~ 222 (712)
. ....+++++..|.+.|.+.+.+.|+ +++++ +|+++++++++..+.+... +|+
T Consensus 161 ~~~~~~~~~~~~~~l~~~L~~~a~~~gv-------------------~~~~~-~v~~i~~~~~~~~~~v~~~-~g~---- 215 (511)
T 2weu_A 161 RAQFPYAYHFDADEVARYLSEYAIARGV-------------------RHVVD-DVQHVGQDERGWISGVHTK-QHG---- 215 (511)
T ss_dssp CSCCSCEEEECHHHHHHHHHHHHHHTTC-------------------EEEEC-CEEEEEECTTSCEEEEEES-SSC----
T ss_pred cCCCCeeEEEcHHHHHHHHHHHHHHCCC-------------------EEEEC-eEeEEEEcCCCCEEEEEEC-CCC----
Confidence 0 1224678999999999999998887 99999 9999998766633344432 452
Q ss_pred EEEecEEEeccCCCchhh-cccCCCccccc--c-cccEEEEEeecCccccccccCCCceEEEEeecCCeEEEEEecCCCC
Q 005134 223 NIQCNILIGTDGAGSTVR-KLVGIDLVGEK--D-LQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEG 298 (712)
Q Consensus 223 ~i~ad~VVgADG~~S~VR-~~lgi~~~g~~--~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 298 (712)
+++||+||+|||.+|.+| +.+|+++.+.. . ....+.+.+...... ...+ .....+.+.+..++++.. +
T Consensus 216 ~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~g~~~~~P~~--~- 287 (511)
T 2weu_A 216 EISGDLFVDCTGFRGLLINQTLGGRFQSFSDVLPNNRAVALRVPRENDE----DMRP-YTTATAMSAGWMWTIPLF--K- 287 (511)
T ss_dssp EEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECSSGG----GCCS-SEEEEEETTEEEEEEECS--S-
T ss_pred EEEcCEEEECCCcchHHHHHHhCCCCccccccCcccceEEEEeccCCCC----CCCc-ceeceecCCCcEEEEECC--C-
Confidence 689999999999999995 55787654321 1 112222222211100 0111 122233444334444432 1
Q ss_pred eEEEEEecCCCCCCCCCCCHHHHHHHHHHHhCCCCC--cceEEEeecceechhhhccccccCCcEEEEccCCccCCCCCC
Q 005134 299 EFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELS--DIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGG 376 (712)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~--~~~i~~~~~w~~~~~va~~~~~~~gRV~LvGDAAH~~~P~gG 376 (712)
...+.+.+.. ...+++...+.+++.++..+. ....+ .+.....+++. .+||+|+|||||.++|+.|
T Consensus 288 ~~~~g~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~rv~liGDAAh~~~P~~g 355 (511)
T 2weu_A 288 RDGNGYVYSD-----EFISPEEAERELRSTVAPGRDDLEANHI-----QMRIGRNERTW--INNCVAVGLSAAFVEPLES 355 (511)
T ss_dssp EEEEEEEECT-----TTSCHHHHHHHHHHHHCTTCTTSCCEEE-----ECCCEEESCSE--ETTEEECGGGTEECCGGGC
T ss_pred ceEEEEEECC-----CCCCHHHHHHHHHHHhCcccccccceeE-----Eeecccccccc--CCCEEEEechhhccCcccc
Confidence 2322222221 123566667777777765421 12222 11122344554 4999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHHHHH
Q 005134 377 FGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (712)
Q Consensus 377 ~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (712)
+|+|+|++||..|++.|.. +...+.+|+.|+++|+++.+.+.+.....+.
T Consensus 356 ~G~~~a~~da~~La~~l~~---~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 405 (511)
T 2weu_A 356 TGIFFIQHAIEQLVKHFPG---ERWDPVLISAYNERMAHMVDGVKEFLVLHYK 405 (511)
T ss_dssp CHHHHHHHHHHHHHHTCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999988762 4456789999999999999888776555444
No 28
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.95 E-value=3.6e-27 Score=269.23 Aligned_cols=339 Identities=12% Similarity=0.098 Sum_probs=207.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCCCCCCCceeecCHhHHH-HHHhhhcHHHH--HHhcCCCccc
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAFSTHPQAHFINNRYAL-VFRKLDGLAEE--IERSQPPVDL 114 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar---~Gi~v~lvEr~~~~~~~~ra~~i~~rtme-ilr~l~Gl~d~--l~~~~~~~~~ 114 (712)
+..+||+||||||+|+++|+.|++ .|++|+||||.+.+.. ..+..+.+++++ +++.+ |+.+. +.........
T Consensus 23 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~-~~g~~~~p~~~~~~l~~l-Gi~~~~~~~~~~~~~~~ 100 (550)
T 2e4g_A 23 GKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTL-GVGEATIPNLQTAFFDFL-GIPEDEWMRECNASYKV 100 (550)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCC-CCCEECCTHHHHHTHHHH-TCCHHHHHHHTTCEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCcc-ceeeeechhHHHHHHHHh-CCChHHHHHhcCCeEEE
Confidence 346899999999999999999999 9999999999765443 346788899999 99999 98765 5544322211
Q ss_pred ------ccee---------------EeeecCCCCe-------eeee----c-----CCC----------cccccc-----
Q 005134 115 ------WRKF---------------IYCTSVTGPI-------LGSV----D-----HMQ----------PQDFEK----- 142 (712)
Q Consensus 115 ------~~~~---------------~~~~~~~G~~-------l~~~----~-----~~~----------~~~~~~----- 142 (712)
|... .+.... |.. +... . ... ..++..
T Consensus 101 g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (550)
T 2e4g_A 101 AIKFINWRTAGEGTSEARELDGGPDHFYHSF-GLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRL 179 (550)
T ss_dssp EEEEESSSSCCCCCSSCCEETTEESEEEEES-SCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCT
T ss_pred eeeEeecccccccccccccccCCCCeeEecC-CccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhh
Confidence 1100 000000 000 0000 0 000 000000
Q ss_pred --ccCCccccccChhHHHHHHHHHHHhc-CceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCce
Q 005134 143 --VVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKC 219 (712)
Q Consensus 143 --~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~ 219 (712)
.......+++++..|.+.|.+.+.+. |+ +++++ +|++++.++++..+.+... +|+
T Consensus 180 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv-------------------~i~~~-~V~~i~~~~~g~~~~v~~~-~G~- 237 (550)
T 2e4g_A 180 DGSKVTNYAWHFDAHLVADFLRRFATEKLGV-------------------RHVED-RVEHVQRDANGNIESVRTA-TGR- 237 (550)
T ss_dssp TSCBCSCCEEEECHHHHHHHHHHHHHHHSCC-------------------EEEEC-CEEEEEECTTSCEEEEEET-TSC-
T ss_pred cCCCCCCcceEEcHHHHHHHHHHHHHhcCCc-------------------EEEEC-eEeEEEEcCCCCEEEEEEC-CCC-
Confidence 00011235689999999999999988 87 99999 9999998766633344432 442
Q ss_pred eeEEEEecEEEeccCCCchh-hcccCCCccccccc---ccEEEEEeecCccccccccCCCceEEEEeecCCeEEEEEecC
Q 005134 220 TERNIQCNILIGTDGAGSTV-RKLVGIDLVGEKDL---QKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDL 295 (712)
Q Consensus 220 ~~~~i~ad~VVgADG~~S~V-R~~lgi~~~g~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 295 (712)
+++||+||+|||.+|.+ ++.+|+.+.+...+ ...+.+........ ....+... ....+.+..++++...
T Consensus 238 ---~i~ad~vI~A~G~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~g~~~~ipl~~ 310 (550)
T 2e4g_A 238 ---VFDADLFVDCSGFRGLLINKAMEEPFLDMSDHLLNDSAVATQVPHDDDA---NGVEPFTS-AIAMKSGWTWKIPMLG 310 (550)
T ss_dssp ---EEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHH---HCCCSSEE-EEECSSEEEEEEECSS
T ss_pred ---EEECCEEEECCCCchhhHHHHhCCCcccccccccccceEEEeecccCCc---ccCCCcee-eeecCCceEEEccCCC
Confidence 68999999999999999 66778765433211 11222222111000 00111111 1122332333333321
Q ss_pred CCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHhCCCC--CcceEEEeecceechhhhccccccCCcEEEEccCCccCCC
Q 005134 296 KEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWEL--SDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPP 373 (712)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~--~~~~i~~~~~w~~~~~va~~~~~~~gRV~LvGDAAH~~~P 373 (712)
.......+.. ...+++...+.+++.++..+ .....+ .+.....+++. .+||+|+|||||.++|
T Consensus 311 ---~~~~g~v~~~-----~~~~~~~~~~~l~~~~~~~p~l~~~~~i-----~~~~~~~~~~~--~~rvvliGDAAh~~~P 375 (550)
T 2e4g_A 311 ---RFGTGYVYSS-----RFATEDEAVREFCEMWHLDPETQPLNRI-----RFRVGRNRRAW--VGNCVSIGTSSCFVEP 375 (550)
T ss_dssp ---EEEEEEEECT-----TTSCHHHHHHHHHHHTTCCTTTSCCEEE-----ECCCEEESCSE--ETTEEECSTTTEECCG
T ss_pred ---ccceEEEEec-----CCCChHHHHHHHHHhhCcCcccCCCceE-----EecCCCccccc--cCCEEEEehhhcccCc
Confidence 1111111111 12355666777777776542 112221 22223344554 4999999999999999
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHHHHhhhHHHHHHHHHHHHHHH
Q 005134 374 AGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (712)
Q Consensus 374 ~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (712)
+.|||+|+|++||.+|++.|. ++...+.+|++|+++|+++.+.+.+....++.
T Consensus 376 ~~GqGi~~a~~da~~La~~L~---~~~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~ 428 (550)
T 2e4g_A 376 LESTGIYFVYAALYQLVKHFP---DKSLNPVLTARFNREIETMFDDTRDFIQAHFY 428 (550)
T ss_dssp GGSCHHHHHHHHHHHHHHTCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998775 34557889999999999999988887766654
No 29
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.92 E-value=1.8e-24 Score=239.55 Aligned_cols=321 Identities=13% Similarity=0.030 Sum_probs=170.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCC-C---ceeecCHhHHHHHHhhhcHHHHHHhcCCCccccc
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH-P---QAHFINNRYALVFRKLDGLAEEIERSQPPVDLWR 116 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~-~---ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~ 116 (712)
.++.||+||||||+||++|+.|+++|++|+||||++..... + ....+...+++.++.+ |+.. ......+..
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~l-g~~~-~~~~~~~~~--- 94 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVAL-DVNE-WPSEEFGYF--- 94 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHT-TCCC-SCHHHHCEE---
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhc-Chhh-hhhhccccc---
Confidence 34579999999999999999999999999999998733211 1 1233556788888777 6521 000011111
Q ss_pred eeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcE
Q 005134 117 KFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHE 196 (712)
Q Consensus 117 ~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~ 196 (712)
.+.... .....+ ++.... ......+.+..+.+.|.+.+.+.|+ ++++..
T Consensus 95 ~~~~~~-~~~~~~---------~~~~~~-~~~~~~v~~~~l~~~L~~~~~~~Gv-------------------~v~~~~- 143 (430)
T 3ihm_A 95 GHYYYV-GGPQPM---------RFYGDL-KAPSRAVDYRLYQPMLMRALEARGG-------------------KFCYDA- 143 (430)
T ss_dssp EEEEEE-CSSSCE---------EEEEEE-EEEEBEECHHHHHHHHHHHHHHTTC-------------------EEEECC-
T ss_pred ceeEEE-CCCCcc---------ccchhc-CCcceeecHHHHHHHHHHHHHHcCC-------------------EEEEEe-
Confidence 110000 011000 110000 1123567899999999999998887 554421
Q ss_pred EEEEEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcc--cccccccEE-EEEeecCccccccccC
Q 005134 197 CVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLV--GEKDLQKLV-SVHFLSKDLGDYLLNE 273 (712)
Q Consensus 197 v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~--g~~~~~~~~-~~~~~~~~l~~~~~~~ 273 (712)
+ ++. +.+ +...++|+||+|||.+|.+|.. +.... .....+..+ ...+.. +.. ..
T Consensus 144 v------------~~~---~l~--~~~~~ad~VV~AdG~~S~~~~~-~~~~~~~~~~~p~r~~~~~~~~g--~~~---~~ 200 (430)
T 3ihm_A 144 V------------SAE---DLE--GLSEQYDLLVVCTGKYALGKVF-EKQSENSPFEKPQRALCVGLFKG--IKE---AP 200 (430)
T ss_dssp C------------CGG---GHH--HHHTTSSEEEECCCCTTGGGGS-CBCGGGCCCSSCSSEEEEEEEES--BCC---CS
T ss_pred c------------chh---hhh--hhcccCCEEEECCCCcchHHhc-cCCCCCCcccCCCeeEEEEEEcc--CCC---CC
Confidence 0 000 000 0112589999999999988743 22211 111122222 222221 111 11
Q ss_pred CCceEEEEeecCCeEEEEEecCCCCeEEEE-EecCCCC--CCCCCC----CHHHH----HHHHHHHhCC---CCC-----
Q 005134 274 RPGMLFFIFNTEAIGVLVAHDLKEGEFILQ-VPFYPPQ--QNLEDF----SPEIC----EKLIFKLVGW---ELS----- 334 (712)
Q Consensus 274 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~----~~e~~----~~~i~~~~g~---~~~----- 334 (712)
.....+.++.+.+..++++.....+...+. +...+.. ...... +++.. .+.++...+. ...
T Consensus 201 ~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (430)
T 3ihm_A 201 IRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFD 280 (430)
T ss_dssp SCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCE
T ss_pred cCeeeeeecCCCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhc
Confidence 112223333222222333332122222111 1111211 111111 44433 3333332211 000
Q ss_pred ----cceEEEeecceechhhhccccccCCcEEE-EccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHcCCCchhhHHHH
Q 005134 335 ----DIDVIDIKPWVMHAEVAEKFLCCYNQIIL-AGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTY 409 (712)
Q Consensus 335 ----~~~i~~~~~w~~~~~va~~~~~~~gRV~L-vGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY 409 (712)
...+.....|+.......+|. .||++| +|||||.++|++|||+|+||+||.+|+|+|+.. + ..+.+|.+|
T Consensus 281 ~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~--~-~~~~~~~~~ 355 (430)
T 3ihm_A 281 LANSSLDILQGGVVPAFRDGHATLN--NGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH--S-VYDLRFSEH 355 (430)
T ss_dssp ESSSTTSEEEECCCCEEBCSEEECT--TSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC--S-CCSHHHHHH
T ss_pred cccCccceeecceeecccccccccC--CCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc--C-CHHHHHHHH
Confidence 112222233444444556776 488888 999999999999999999999999999999975 3 367899999
Q ss_pred HHhhh-HHHHHHHHHHH
Q 005134 410 ETERK-PIAEFNTALSV 425 (712)
Q Consensus 410 ~~eRr-p~a~~~~~~s~ 425 (712)
+.+|+ ++++.+.+++.
T Consensus 356 ~~~r~~~~~~~~~~~~~ 372 (430)
T 3ihm_A 356 LERRRQDRVLCATRWTN 372 (430)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999 66666555543
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.75 E-value=6.4e-17 Score=172.23 Aligned_cols=293 Identities=15% Similarity=0.177 Sum_probs=146.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC------------ceeecC---HhHHHHHHhhhcHHHHHHh
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP------------QAHFIN---NRYALVFRKLDGLAEEIER 107 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~------------ra~~i~---~rtmeilr~l~Gl~d~l~~ 107 (712)
++||+||||||+||++|+.|+++|++|+||||.+.+.... ....+. +...++++.+ ..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 74 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQW-------QA 74 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHH-------HH
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHH-------Hh
Confidence 3799999999999999999999999999999997542111 111222 2233333332 12
Q ss_pred cCCCccccc-eeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCcccccccccc
Q 005134 108 SQPPVDLWR-KFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLL 186 (712)
Q Consensus 108 ~~~~~~~~~-~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~ 186 (712)
.+... .|. .+.... .+ .+. . .. ..+ .....+..+.. |.+.+.+ ++
T Consensus 75 ~~~~~-~~~~~~~~~~--~~-~~~---~---~~----~~~--~~~~~~~~~~~-l~~~l~~-g~---------------- 120 (336)
T 1yvv_A 75 QGHVA-EWTPLLYNFH--AG-RLS---P---SP----DEQ--VRWVGKPGMSA-ITRAMRG-DM---------------- 120 (336)
T ss_dssp HTSEE-EECCCEEEES--SS-BCC---C---CC----TTS--CEEEESSCTHH-HHHHHHT-TC----------------
T ss_pred CCCee-eccccceecc--Cc-ccc---c---CC----CCC--ccEEcCccHHH-HHHHHHc-cC----------------
Confidence 11111 111 111110 00 000 0 00 000 00111122222 2233322 44
Q ss_pred ccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCc----ccccccccEEEEEee
Q 005134 187 QGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDL----VGEKDLQKLVSVHFL 262 (712)
Q Consensus 187 ~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~----~g~~~~~~~~~~~~~ 262 (712)
+|+++++|+++++++++++++.. +|+ ...++|+||+|||++|.+|...+++. ...-.+.....+.+.
T Consensus 121 ---~i~~~~~v~~i~~~~~~~~v~~~---~g~---~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 191 (336)
T 1yvv_A 121 ---PVSFSCRITEVFRGEEHWNLLDA---EGQ---NHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALA 191 (336)
T ss_dssp ---CEECSCCEEEEEECSSCEEEEET---TSC---EEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEE
T ss_pred ---cEEecCEEEEEEEeCCEEEEEeC---CCc---CccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEE
Confidence 89999999999999999876642 453 24469999999999999986533220 011112223322222
Q ss_pred cCccccccccCCCceEEEEeecCCeEEEEEe---cCCCC---eEEEEEecCCCCCCCCCCCHHHHHHH----HHHHhCCC
Q 005134 263 SKDLGDYLLNERPGMLFFIFNTEAIGVLVAH---DLKEG---EFILQVPFYPPQQNLEDFSPEICEKL----IFKLVGWE 332 (712)
Q Consensus 263 ~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~----i~~~~g~~ 332 (712)
.+.. . . .+...++ ...+..+++... +...+ .|+++.... ......+.+++.+.+. +++.+|..
T Consensus 192 ~~~~-~---~-~~~~~~~-~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~lg~~ 264 (336)
T 1yvv_A 192 FETP-L---Q-TPMQGCF-VQDSPLDWLARNRSKPERDDTLDTWILHATSQ-WSRQNLDASREQVIEHLHGAFAELIDCT 264 (336)
T ss_dssp ESSC-C---S-CCCCEEE-ECSSSEEEEEEGGGSTTCCCSSEEEEEEECHH-HHHHTTTSCHHHHHHHHHHHHHTTCSSC
T ss_pred ecCC-C---C-CCCCeEE-eCCCceeEEEecCcCCCCCCCCcEEEEEeCHH-HHHHHHhCCHHHHHHHHHHHHHHHhCCC
Confidence 2110 0 1 1111122 222223343322 11112 356554210 0111233455544443 34445543
Q ss_pred CCcceEEEeecceech----hhhccccccCCcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHHc
Q 005134 333 LSDIDVIDIKPWVMHA----EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK 398 (712)
Q Consensus 333 ~~~~~i~~~~~w~~~~----~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~ 398 (712)
...........|.... .....+....+||+|+|||+|. .|+|.|+.++..||..|...++
T Consensus 265 ~~~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 265 MPAPVFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp CCCCSEEEEEEEEEEEESSCCCCSCEEETTTTEEECCGGGTT------SSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCcEEEccccCccCCCCCCCCCeeecCCCCEEEEecCCCC------CCHHHHHHHHHHHHHHHHHHhh
Confidence 2222333444564321 1111121124899999999973 4899999998888888877654
No 31
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.63 E-value=1.3e-14 Score=158.35 Aligned_cols=218 Identities=9% Similarity=0.092 Sum_probs=122.4
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEE
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VV 230 (712)
.+.-..+...|.+.+++.|+ +++++++|++++.+++.+. .+.. ++| +++||+||
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~-------------------~i~~~~~v~~i~~~~~~~~-~v~~-~~g-----~~~a~~vV 223 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGV-------------------DIIQNCEVTGFIKDGEKVT-GVKT-TRG-----TIHAGKVA 223 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEESSSBEE-EEEE-TTC-----CEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCC-------------------EEEcCCeEEEEEEeCCEEE-EEEe-CCc-----eEECCEEE
Confidence 34455788889999988887 9999999999998876643 2222 233 58999999
Q ss_pred eccCCCc-hhhcccCCCcccccccccEEEEEeecCccccccccCCCceEEEEeecCCeEEEEEecCCCCeEEEEEecCCC
Q 005134 231 GTDGAGS-TVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPP 309 (712)
Q Consensus 231 gADG~~S-~VR~~lgi~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 309 (712)
.|+|++| .+++.+|+..........++.. . .+...+ ... +++.+...++.+. .++.+.+.....+.
T Consensus 224 ~a~G~~s~~l~~~~g~~~~~~~~~~~~~~~--~--~~~~~~----~~~---~~~~~~~~y~~p~--~~g~~~ig~~~~~~ 290 (405)
T 2gag_B 224 LAGAGHSSVLAEMAGFELPIQSHPLQALVS--E--LFEPVH----PTV---VMSNHIHVYVSQA--HKGELVMGAGIDSY 290 (405)
T ss_dssp ECCGGGHHHHHHHHTCCCCEEEEEEEEEEE--E--EBCSCC----CSE---EEETTTTEEEEEC--TTSEEEEEEEECSS
T ss_pred ECCchhHHHHHHHcCCCCCccccceeEEEe--c--CCcccc----Cce---EEeCCCcEEEEEc--CCCcEEEEeccCCC
Confidence 9999998 6888887765322222222111 1 111110 111 1122222222222 23455554332211
Q ss_pred CCCCCCCCHHH---HHHHHHHHhCCCCCcceEEEeecceechhhhccccccCCcEEEEccCCccCCCCCCcchh-hHHHH
Q 005134 310 QQNLEDFSPEI---CEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMN-TGVQD 385 (712)
Q Consensus 310 ~~~~~~~~~e~---~~~~i~~~~g~~~~~~~i~~~~~w~~~~~va~~~~~~~gRV~LvGDAAH~~~P~gG~G~n-~gi~D 385 (712)
.......+++. +.+.+++.++. ....++. ..|.-. ..+. .++++++|++. .-.-+...|+| .|+..
T Consensus 291 ~~~~~~~~~~~~~~l~~~~~~~~p~-l~~~~~~--~~w~g~----~~~t--~d~~p~ig~~~-~~~l~~~~G~~g~G~~~ 360 (405)
T 2gag_B 291 NGYGQRGAFHVIQEQMAAAVELFPI-FARAHVL--RTWGGI----VDTT--MDASPIISKTP-IQNLYVNCGWGTGGFKG 360 (405)
T ss_dssp CCCSSCCCTHHHHHHHHHHHHHCGG-GGGCEEC--EEEEEE----EEEE--TTSCCEEEECS-SBTEEEEECCGGGCSTT
T ss_pred CccccCCCHHHHHHHHHHHHHhCCc-cccCCcc--eEEeec----cccC--CCCCCEecccC-CCCEEEEecCCCchhhH
Confidence 11111223333 33444444432 1122332 234211 1122 37889999975 11112345555 78999
Q ss_pred HHHHHHHHHHHHcCCCchhhHHHHHHhhhHHH
Q 005134 386 AHNLAWKIASVLKDIAPASILNTYETERKPIA 417 (712)
Q Consensus 386 A~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a 417 (712)
+.+++|+|+..+.+...+..++.|+.+|.+..
T Consensus 361 a~~~g~~la~~i~g~~~~~~~~~~~~~R~~~~ 392 (405)
T 2gag_B 361 TPGAGFTLAHTIANDEPHELNKPFSLERFETG 392 (405)
T ss_dssp HHHHHHHHHHHHHHTSCCTTTTTSCSTHHHHT
T ss_pred HHHHHHHHHHHHhCCCCCccccccCcchhcCC
Confidence 99999999999887766778999999997653
No 32
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.56 E-value=5.6e-14 Score=142.76 Aligned_cols=36 Identities=31% Similarity=0.550 Sum_probs=34.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.+||+||||||+||++|+.|+++|++|+||||.+.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 489999999999999999999999999999998865
No 33
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.53 E-value=9.7e-14 Score=150.35 Aligned_cols=209 Identities=14% Similarity=0.100 Sum_probs=111.3
Q ss_pred cccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEE
Q 005134 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNIL 229 (712)
Q Consensus 150 ~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~V 229 (712)
..+....+...|.+.+.+.|+ +++++++|++++.+++++.++. .+| +++||+|
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~-------------------~i~~~~~v~~i~~~~~~~~v~~---~~g-----~~~a~~v 211 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGA-------------------EIFEHTPVLHVERDGEALFIKT---PSG-----DVWANHV 211 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTC-------------------EEETTCCCCEEECSSSSEEEEE---TTE-----EEEEEEE
T ss_pred eEEcHHHHHHHHHHHHHHCCC-------------------EEEcCCcEEEEEEECCEEEEEc---CCc-----eEEcCEE
Confidence 355667888999999988887 9999999999998888774432 222 5899999
Q ss_pred EeccCCCch-hhcccCCCcccccccccEEEEEeecCccccccccCCCceEEEEeecCCeEEEEEecCCCCeEEEEEecCC
Q 005134 230 IGTDGAGST-VRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYP 308 (712)
Q Consensus 230 VgADG~~S~-VR~~lgi~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 308 (712)
|.|+|.+|. +.+.+++...-....... +.+.... ..+ ... ++.. ..++.+. .++.+.+......
T Consensus 212 V~A~G~~s~~l~~~~~~~~~~~~~~g~~--~~~~~~~--~~~----~~~---~~~~--~~~~~p~--~~g~~~vG~~~~~ 276 (382)
T 1ryi_A 212 VVASGVWSGMFFKQLGLNNAFLPVKGEC--LSVWNDD--IPL----TKT---LYHD--HCYIVPR--KSGRLVVGATMKP 276 (382)
T ss_dssp EECCGGGTHHHHHHTTCCCCCEEEEEEE--EEEECCS--SCC----CSE---EEET--TEEEEEC--TTSEEEEECCCEE
T ss_pred EECCChhHHHHHHhcCCCCceeccceEE--EEECCCC--CCc----cce---EEcC--CEEEEEc--CCCeEEEeecccc
Confidence 999999987 777776543211111111 1222111 110 111 1222 1233332 2244444422111
Q ss_pred CCCCCCCCCHHHHH---HHHHHHhCCCCCcceEEEeecceechhhhccccccCCcEEEEccCC-----ccCCCCCCcchh
Q 005134 309 PQQNLEDFSPEICE---KLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDAC-----HRFPPAGGFGMN 380 (712)
Q Consensus 309 ~~~~~~~~~~e~~~---~~i~~~~g~~~~~~~i~~~~~w~~~~~va~~~~~~~gRV~LvGDAA-----H~~~P~gG~G~n 380 (712)
. ......+++... +.++++++. ....++. ..|.-. ..+. .++..++|++. +...+++|.|+.
T Consensus 277 ~-~~~~~~~~~~~~~l~~~~~~~~p~-l~~~~~~--~~w~g~----~~~t--~d~~p~ig~~~~~~~l~~~~G~~g~G~~ 346 (382)
T 1ryi_A 277 G-DWSETPDLGGLESVMKKAKTMLPA-IQNMKVD--RFWAGL----RPGT--KDGKPYIGRHPEDSRILFAAGHFRNGIL 346 (382)
T ss_dssp T-CCCCSCCHHHHHHHHHHHHHHCGG-GGGSEEE--EEEEEE----EEEC--SSSCCEEEEETTEEEEEEEECCSSCTTT
T ss_pred c-CCCCCCCHHHHHHHHHHHHHhCCC-cCCCcee--eEEEEe----cccC--CCCCcEeccCCCcCCEEEEEcCCcchHH
Confidence 1 111123344333 334444432 1122332 223211 1122 25667778763 335678889999
Q ss_pred hHHHHHHHHHHHHHHHHcCCCchhhH-HHHHHhhh
Q 005134 381 TGVQDAHNLAWKIASVLKDIAPASIL-NTYETERK 414 (712)
Q Consensus 381 ~gi~DA~~LawkLa~vl~g~a~~~lL-~sY~~eRr 414 (712)
++..-+..||..| .+...+..+ +.|.-+|.
T Consensus 347 ~a~~~g~~la~~i----~~~~~~~~~~~~~~~~Rf 377 (382)
T 1ryi_A 347 LAPATGALISDLI----MNKEVNQDWLHAFRIDRK 377 (382)
T ss_dssp THHHHHHHHHHHH----TTCCCCHHHHHHTCSCCC
T ss_pred HhHHHHHHHHHHH----hCCCCCchhhcCCChhhc
Confidence 8887776666555 344333334 77766664
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.45 E-value=6.1e-13 Score=144.08 Aligned_cols=69 Identities=14% Similarity=0.231 Sum_probs=55.0
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEE-EEEEeccCCceeeEEEEecEE
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNIL 229 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~V 229 (712)
.++...+...|.+.+++.|+ +++++++|++++.++++++ ++. .+| +++||+|
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv-------------------~i~~~~~v~~i~~~~~~v~gv~~---~~g-----~i~a~~V 197 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGA-------------------KLLEYTEVKGFLIENNEIKGVKT---NKG-----IIKTGIV 197 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEESSSBEEEEEE---TTE-----EEECSEE
T ss_pred eECHHHHHHHHHHHHHHCCC-------------------EEECCceEEEEEEECCEEEEEEE---CCc-----EEECCEE
Confidence 45667888889999988887 9999999999998888765 433 233 5899999
Q ss_pred EeccCCCc-hhhcccCCC
Q 005134 230 IGTDGAGS-TVRKLVGID 246 (712)
Q Consensus 230 VgADG~~S-~VR~~lgi~ 246 (712)
|.|+|.+| .+.+.+|+.
T Consensus 198 V~A~G~~s~~l~~~~g~~ 215 (382)
T 1y56_B 198 VNATNAWANLINAMAGIK 215 (382)
T ss_dssp EECCGGGHHHHHHHHTCC
T ss_pred EECcchhHHHHHHHcCCC
Confidence 99999998 567777654
No 35
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.35 E-value=3.9e-12 Score=139.45 Aligned_cols=143 Identities=18% Similarity=0.275 Sum_probs=89.6
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCC------CceeecC------------H-hHHHHHHhh--
Q 005134 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH------PQAHFIN------------N-RYALVFRKL-- 98 (712)
Q Consensus 40 ~~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~------~ra~~i~------------~-rtmeilr~l-- 98 (712)
.+.++||+||||||+||++|+.|+++|++|+||||.+.+... ++....+ + .....+.++
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH
Confidence 356799999999999999999999999999999999865211 0110000 0 011122222
Q ss_pred hcHHHHHHhcCCCccccceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCcc
Q 005134 99 DGLAEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGT 178 (712)
Q Consensus 99 ~Gl~d~l~~~~~~~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~ 178 (712)
..+.+.+...+.+.. ....|. .........+.+.|.+.+++.|+
T Consensus 104 ~~~~~~~~~~Gi~~~--------~~~~g~--------------------~~~~~~~~~l~~~L~~~l~~~Gv-------- 147 (417)
T 3v76_A 104 QDFVALVERHGIGWH--------EKTLGQ--------------------LFCDHSAKDIIRMLMAEMKEAGV-------- 147 (417)
T ss_dssp HHHHHHHHHTTCCEE--------ECSTTE--------------------EEESSCHHHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHcCCCcE--------EeeCCE--------------------EeeCCCHHHHHHHHHHHHHHCCC--------
Confidence 011111222221110 000000 01123466788889999998887
Q ss_pred ccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCc
Q 005134 179 EGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (712)
Q Consensus 179 ~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (712)
+++++++|++++.+++++.+... +| +++||+||.|+|.+|
T Consensus 148 -----------~i~~~~~V~~i~~~~~~~~V~~~---~g-----~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 148 -----------QLRLETSIGEVERTASGFRVTTS---AG-----TVDAASLVVASGGKS 187 (417)
T ss_dssp -----------EEECSCCEEEEEEETTEEEEEET---TE-----EEEESEEEECCCCSS
T ss_pred -----------EEEECCEEEEEEEeCCEEEEEEC---Cc-----EEEeeEEEECCCCcc
Confidence 99999999999998888665542 22 689999999999999
No 36
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.35 E-value=2.2e-11 Score=132.68 Aligned_cols=67 Identities=9% Similarity=0.112 Sum_probs=53.1
Q ss_pred cChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEEe
Q 005134 152 FSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIG 231 (712)
Q Consensus 152 i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVg 231 (712)
+....+...|.+.+.+.|+ +++++++|++++.++++++++. +++ +++||+||.
T Consensus 150 ~~~~~~~~~l~~~a~~~Gv-------------------~i~~~~~V~~i~~~~~~v~v~t---~~g-----~i~a~~VV~ 202 (397)
T 2oln_A 150 IDVRGTLAALFTLAQAAGA-------------------TLRAGETVTELVPDADGVSVTT---DRG-----TYRAGKVVL 202 (397)
T ss_dssp EEHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEEETTEEEEEE---SSC-----EEEEEEEEE
T ss_pred EcHHHHHHHHHHHHHHcCC-------------------EEECCCEEEEEEEcCCeEEEEE---CCC-----EEEcCEEEE
Confidence 3445678888888888887 9999999999999888866532 233 589999999
Q ss_pred ccCCC-chhhcccCC
Q 005134 232 TDGAG-STVRKLVGI 245 (712)
Q Consensus 232 ADG~~-S~VR~~lgi 245 (712)
|+|++ +.+++.+|+
T Consensus 203 A~G~~s~~l~~~~g~ 217 (397)
T 2oln_A 203 ACGPYTNDLLEPLGA 217 (397)
T ss_dssp CCGGGHHHHHGGGTC
T ss_pred cCCcChHHHhhhcCC
Confidence 99999 457777775
No 37
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.34 E-value=2.2e-11 Score=131.95 Aligned_cols=67 Identities=10% Similarity=0.091 Sum_probs=52.3
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEE
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VV 230 (712)
.+....+...|.+.+++.|+ +++++++|++++.+++++.++. ++| +++||+||
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv-------------------~i~~~~~v~~i~~~~~~~~v~~---~~g-----~~~a~~vV 198 (389)
T 2gf3_A 146 VLFSENCIRAYRELAEARGA-------------------KVLTHTRVEDFDISPDSVKIET---ANG-----SYTADKLI 198 (389)
T ss_dssp EEEHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEECSSCEEEEE---TTE-----EEEEEEEE
T ss_pred EEeHHHHHHHHHHHHHHCCC-------------------EEEcCcEEEEEEecCCeEEEEe---CCC-----EEEeCEEE
Confidence 34456788889999988887 9999999999999888765542 222 58999999
Q ss_pred eccCCCch-hhcccC
Q 005134 231 GTDGAGST-VRKLVG 244 (712)
Q Consensus 231 gADG~~S~-VR~~lg 244 (712)
.|+|.+|. +.+.++
T Consensus 199 ~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 199 VSMGAWNSKLLSKLN 213 (389)
T ss_dssp ECCGGGHHHHGGGGT
T ss_pred EecCccHHHHhhhhc
Confidence 99999975 555565
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.33 E-value=4.3e-11 Score=129.10 Aligned_cols=69 Identities=19% Similarity=0.354 Sum_probs=54.6
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEE
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VV 230 (712)
.++...+...|.+.+++.|+ +++++++|++++.+++++.|+. .+| +++||.||
T Consensus 150 ~~~~~~~~~~l~~~a~~~Gv-------------------~i~~~~~V~~i~~~~~~~~V~t---~~g-----~i~a~~VV 202 (381)
T 3nyc_A 150 DIDTDALHQGYLRGIRRNQG-------------------QVLCNHEALEIRRVDGAWEVRC---DAG-----SYRAAVLV 202 (381)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEESSCCCCEEEEETTEEEEEC---SSE-----EEEESEEE
T ss_pred eECHHHHHHHHHHHHHHCCC-------------------EEEcCCEEEEEEEeCCeEEEEe---CCC-----EEEcCEEE
Confidence 35567788889999988887 9999999999999888755443 122 68999999
Q ss_pred eccCCCc-hhhcccCCC
Q 005134 231 GTDGAGS-TVRKLVGID 246 (712)
Q Consensus 231 gADG~~S-~VR~~lgi~ 246 (712)
.|+|++| .+.+.+|+.
T Consensus 203 ~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 203 NAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp ECCGGGHHHHHHHHTCC
T ss_pred ECCChhHHHHHHHhCCC
Confidence 9999998 466667754
No 39
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.33 E-value=1.7e-11 Score=131.57 Aligned_cols=72 Identities=11% Similarity=0.167 Sum_probs=57.2
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCe-EEEEEEeccCCceeeEEEEecEE
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQC-INVIASFLKEGKCTERNIQCNIL 229 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~-v~v~v~~~~~g~~~~~~i~ad~V 229 (712)
.+....+...|.+.+++.|+ +++++++|++++.++++ +.+++. +|+ ..+++||+|
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv-------------------~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~~~a~~V 201 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGA-------------------QLVFHTPLIAGRVRPEGGFELDFG---GAE--PMTLSCRVL 201 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEECTTSSEEEEEC---TTS--CEEEEEEEE
T ss_pred EECHHHHHHHHHHHHHHCCC-------------------EEECCCEEEEEEEcCCceEEEEEC---CCc--eeEEEeCEE
Confidence 45667888899999999887 99999999999998776 655442 442 357999999
Q ss_pred EeccCCCc-hhhccc-CCC
Q 005134 230 IGTDGAGS-TVRKLV-GID 246 (712)
Q Consensus 230 VgADG~~S-~VR~~l-gi~ 246 (712)
|.|+|++| .+.+.+ |++
T Consensus 202 V~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 202 INAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EECCGGGHHHHHHTEETSC
T ss_pred EECCCcchHHHHHHhcCCC
Confidence 99999998 567777 765
No 40
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.33 E-value=3.8e-11 Score=115.66 Aligned_cols=118 Identities=22% Similarity=0.321 Sum_probs=86.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeeec
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~~ 123 (712)
++|+||||||+|+.+|..|+++|.+|+|||+.+..... .. .+ . .
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~--~~-----------~~--------------~---------~ 45 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKG--VS-----------RV--------------P---------N 45 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTT--CS-----------CC--------------C---------C
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccC--ch-----------hh--------------h---------c
Confidence 68999999999999999999999999999998732110 00 00 0 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEc
Q 005134 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (712)
Q Consensus 124 ~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~ 203 (712)
..+ + | ..+....+...|.+.+++.|+ +++++ ++++++.+
T Consensus 46 ~~~-------------~-----~---~~~~~~~~~~~l~~~~~~~gv-------------------~v~~~-~v~~i~~~ 84 (180)
T 2ywl_A 46 YPG-------------L-----L---DEPSGEELLRRLEAHARRYGA-------------------EVRPG-VVKGVRDM 84 (180)
T ss_dssp STT-------------C-----T---TCCCHHHHHHHHHHHHHHTTC-------------------EEEEC-CCCEEEEC
T ss_pred cCC-------------C-----c---CCCCHHHHHHHHHHHHHHcCC-------------------EEEeC-EEEEEEEc
Confidence 000 0 0 123456788888888888887 89999 99999988
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCC
Q 005134 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGID 246 (712)
Q Consensus 204 ~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~ 246 (712)
++++++++. +| ++++|+||.|+|.+|.+++.+|++
T Consensus 85 ~~~~~v~~~---~g-----~i~ad~vI~A~G~~~~~~~~~g~~ 119 (180)
T 2ywl_A 85 GGVFEVETE---EG-----VEKAERLLLCTHKDPTLPSLLGLT 119 (180)
T ss_dssp SSSEEEECS---SC-----EEEEEEEEECCTTCCHHHHHHTCC
T ss_pred CCEEEEEEC---CC-----EEEECEEEECCCCCCCccccCCCC
Confidence 777655432 33 589999999999999887777654
No 41
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.30 E-value=1.3e-11 Score=136.93 Aligned_cols=166 Identities=17% Similarity=0.251 Sum_probs=93.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCC------CceeecCHhHH-HHHHhhh---c-HHHHHHhcC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH------PQAHFINNRYA-LVFRKLD---G-LAEEIERSQ 109 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~------~ra~~i~~rtm-eilr~l~---G-l~d~l~~~~ 109 (712)
.+++||+|||||++||++|+.|+++|++|+||||.+.+... ++....+.... +++..+. . +...+....
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 34589999999999999999999999999999998754210 01111110000 1111110 0 000000000
Q ss_pred CCccccceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccc
Q 005134 110 PPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGR 189 (712)
Q Consensus 110 ~~~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 189 (712)
..+. ..++. ..|-.+... .... ..| .......+.+.|.+.+++.|+
T Consensus 104 -~~~~---~~~~~-~~G~~~~~~------~~g~-~~p---~~~~~~~l~~~L~~~~~~~GV------------------- 149 (447)
T 2i0z_A 104 -NEDI---ITFFE-NLGVKLKEE------DHGR-MFP---VSNKAQSVVDALLTRLKDLGV------------------- 149 (447)
T ss_dssp -HHHH---HHHHH-HTTCCEEEC------GGGE-EEE---TTCCHHHHHHHHHHHHHHTTC-------------------
T ss_pred -HHHH---HHHHH-hcCCceEEe------eCCE-EEC---CCCCHHHHHHHHHHHHHHCCC-------------------
Confidence 0000 00000 001000000 0000 000 011246778889898888887
Q ss_pred eEEeCcEEEEEEEcCCe-EEEEEEeccCCceeeEEEEecEEEeccCCCc-----------hhhcccCCCc
Q 005134 190 EILMGHECVSVSATDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGS-----------TVRKLVGIDL 247 (712)
Q Consensus 190 ~v~~g~~v~~v~~~~~~-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S-----------~VR~~lgi~~ 247 (712)
+|+++++|+++..+++. +.|++ .+|+ +++||.||.|+|..| .+++++|+..
T Consensus 150 ~i~~~~~V~~i~~~~~~v~~V~~---~~G~----~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 150 KIRTNTPVETIEYENGQTKAVIL---QTGE----VLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp EEECSCCEEEEEEETTEEEEEEE---TTCC----EEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred EEEeCcEEEEEEecCCcEEEEEE---CCCC----EEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 99999999999987776 33433 2442 589999999999999 7777777654
No 42
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.29 E-value=8.1e-10 Score=124.22 Aligned_cols=73 Identities=15% Similarity=0.052 Sum_probs=57.1
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEE
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VV 230 (712)
.++...+...|.+.+.+.|+ +++++++|++++.+++.+.|++.+..+|+ +.+++||+||
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv-------------------~i~~~~~V~~l~~~~~~~~V~~~d~~~G~--~~~i~A~~VV 203 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGG-------------------EVLTRTRATSARRENGLWIVEAEDIDTGK--KYSWQARGLV 203 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEEETTEEEEEEEETTTCC--EEEEEESCEE
T ss_pred EEcHHHHHHHHHHHHHHcCC-------------------EEEcCcEEEEEEEeCCEEEEEEEECCCCC--EEEEECCEEE
Confidence 45677899999999999887 99999999999988766666665433453 3579999999
Q ss_pred eccCCCch-hhcc-cC
Q 005134 231 GTDGAGST-VRKL-VG 244 (712)
Q Consensus 231 gADG~~S~-VR~~-lg 244 (712)
.|+|.+|. +++. ++
T Consensus 204 ~AtG~~s~~l~~~~l~ 219 (501)
T 2qcu_A 204 NATGPWVKQFFDDGMH 219 (501)
T ss_dssp ECCGGGHHHHHHHHTC
T ss_pred ECCChhHHHHHHHhcc
Confidence 99999986 5554 54
No 43
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.28 E-value=1.1e-10 Score=136.21 Aligned_cols=70 Identities=10% Similarity=0.181 Sum_probs=54.8
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEE
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VV 230 (712)
.+....+...|.+.+++.|+ +|+++++|++++.+++++.|+.. +|. +++||.||
T Consensus 413 ~v~p~~l~~aL~~~a~~~Gv-------------------~i~~~t~V~~l~~~~~~v~V~t~---~G~----~i~Ad~VV 466 (676)
T 3ps9_A 413 WLCPAELTRNVLELAQQQGL-------------------QIYYQYQLQNFSRKDDCWLLNFA---GDQ----QATHSVVV 466 (676)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEEETTEEEEEET---TSC----EEEESEEE
T ss_pred eeCHHHHHHHHHHHHHhCCC-------------------EEEeCCeeeEEEEeCCeEEEEEC---CCC----EEECCEEE
Confidence 45567888899999998887 99999999999999888655432 332 58999999
Q ss_pred eccCCCch-hhcccCCC
Q 005134 231 GTDGAGST-VRKLVGID 246 (712)
Q Consensus 231 gADG~~S~-VR~~lgi~ 246 (712)
.|+|..|. +.+.++++
T Consensus 467 lAtG~~s~~l~~~~~lp 483 (676)
T 3ps9_A 467 LANGHQISRFSQTSTLP 483 (676)
T ss_dssp ECCGGGGGCSTTTTTCS
T ss_pred ECCCcchhccccccCCc
Confidence 99999986 45445544
No 44
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.27 E-value=8.2e-11 Score=129.87 Aligned_cols=62 Identities=8% Similarity=0.162 Sum_probs=50.6
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCc---EEEEEEEcCCeEE-EEEEeccCCceeeEEEEe
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH---ECVSVSATDQCIN-VIASFLKEGKCTERNIQC 226 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~---~v~~v~~~~~~v~-v~v~~~~~g~~~~~~i~a 226 (712)
.+....+...|.+.+++.|+ +|++++ +|+++..++++++ |++. +| .+++|
T Consensus 157 ~~~~~~~~~~L~~~a~~~Gv-------------------~i~~~t~~~~V~~i~~~~~~v~gV~t~---~G----~~i~A 210 (438)
T 3dje_A 157 WAHARNALVAAAREAQRMGV-------------------KFVTGTPQGRVVTLIFENNDVKGAVTA---DG----KIWRA 210 (438)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEEESTTTTCEEEEEEETTEEEEEEET---TT----EEEEC
T ss_pred EecHHHHHHHHHHHHHhcCC-------------------EEEeCCcCceEEEEEecCCeEEEEEEC---CC----CEEEC
Confidence 44556788899999998887 999999 9999999888876 5442 45 26899
Q ss_pred cEEEeccCCCch
Q 005134 227 NILIGTDGAGST 238 (712)
Q Consensus 227 d~VVgADG~~S~ 238 (712)
|.||.|+|++|.
T Consensus 211 d~VV~AtG~~s~ 222 (438)
T 3dje_A 211 ERTFLCAGASAG 222 (438)
T ss_dssp SEEEECCGGGGG
T ss_pred CEEEECCCCChh
Confidence 999999999985
No 45
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.27 E-value=1.6e-09 Score=123.29 Aligned_cols=75 Identities=13% Similarity=0.026 Sum_probs=60.4
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEE-EEEEeccCCceeeEEEEecEE
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNIL 229 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~V 229 (712)
.++...|...|.+.+.+.|+ +++++++|+++..+++++. |++.+..+|+ ..+++|++|
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~-------------------~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~--~~~i~A~~V 224 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGA-------------------VALNYMKVESFIYDQGKVVGVVAKDRLTDT--THTIYAKKV 224 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTC-------------------EEEESEEEEEEEEETTEEEEEEEEETTTCC--EEEEEEEEE
T ss_pred eEcHHHHHHHHHHHHHHcCC-------------------EEEcCCEEEEEEEcCCeEEEEEEEEcCCCc--eEEEECCEE
Confidence 56677888899999998887 9999999999999888754 6665433443 468999999
Q ss_pred EeccCCCc-hhhcccCCC
Q 005134 230 IGTDGAGS-TVRKLVGID 246 (712)
Q Consensus 230 VgADG~~S-~VR~~lgi~ 246 (712)
|.|+|.+| .+++.+|+.
T Consensus 225 V~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 225 VNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp EECCGGGHHHHHHTTTCC
T ss_pred EECCCcchHHHHHhcCCC
Confidence 99999998 678887764
No 46
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.26 E-value=3.5e-11 Score=125.05 Aligned_cols=143 Identities=14% Similarity=0.219 Sum_probs=92.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCCCCC--Cc-----eeecCHhHHHHHHhhhcHHHHHHhcCCCcc
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAFSTH--PQ-----AHFINNRYALVFRKLDGLAEEIERSQPPVD 113 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~-Gi~v~lvEr~~~~~~~--~r-----a~~i~~rtmeilr~l~Gl~d~l~~~~~~~~ 113 (712)
.++||+||||||+||++|+.|+++ |++|+||||.+.+... .+ ...+.....++|+++ |+ +..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~-G~---------~~~ 107 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEI-GV---------AYD 107 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHH-TC---------CCE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHc-CC---------Ccc
Confidence 458999999999999999999998 9999999998765311 11 112222333444443 32 110
Q ss_pred ccceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHh-cCceeeccCccccccccccccceEE
Q 005134 114 LWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREIL 192 (712)
Q Consensus 114 ~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~v~ 192 (712)
. .+.. ........+...|.+++.+ .|+ +++
T Consensus 108 ~----------~~~~--------------------~~~~~~~~~~~~l~~~~~~~~gv-------------------~i~ 138 (284)
T 1rp0_A 108 E----------QDTY--------------------VVVKHAALFTSTIMSKLLARPNV-------------------KLF 138 (284)
T ss_dssp E----------CSSE--------------------EEESCHHHHHHHHHHHHHTSTTE-------------------EEE
T ss_pred c----------CCCE--------------------EEecCHHHHHHHHHHHHHhcCCC-------------------EEE
Confidence 0 0000 0112345677778887765 465 999
Q ss_pred eCcEEEEEEEcCCeEE-EEEEec----c--CC-ceeeEEEEecEEEeccCCCchhhccc
Q 005134 193 MGHECVSVSATDQCIN-VIASFL----K--EG-KCTERNIQCNILIGTDGAGSTVRKLV 243 (712)
Q Consensus 193 ~g~~v~~v~~~~~~v~-v~v~~~----~--~g-~~~~~~i~ad~VVgADG~~S~VR~~l 243 (712)
++++|+++..+++.+. +.+... + ++ .....+++||+||.|+|.+|.++...
T Consensus 139 ~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 139 NAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp ETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred cCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 9999999998877653 333210 1 11 01235799999999999999987653
No 47
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.23 E-value=3.1e-11 Score=136.17 Aligned_cols=69 Identities=14% Similarity=0.158 Sum_probs=52.6
Q ss_pred hhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEE-EEEEeccCCceeeEEEEecEEEec
Q 005134 154 QYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGT 232 (712)
Q Consensus 154 q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~VVgA 232 (712)
...+...|.+.+.+.|+ +|+++++|++++.+++.+. +++ .+|+ +++||+||.|
T Consensus 219 ~~~l~~~L~~~l~~~Gv-------------------~I~~~t~V~~I~~~~~~v~gV~l---~~G~----~i~Ad~VVlA 272 (549)
T 3nlc_A 219 LVTMIEKMRATIIELGG-------------------EIRFSTRVDDLHMEDGQITGVTL---SNGE----EIKSRHVVLA 272 (549)
T ss_dssp HHHHHHHHHHHHHHTTC-------------------EEESSCCEEEEEESSSBEEEEEE---TTSC----EEECSCEEEC
T ss_pred HHHHHHHHHHHHHhcCC-------------------EEEeCCEEEEEEEeCCEEEEEEE---CCCC----EEECCEEEEC
Confidence 35677778888888887 9999999999998877654 333 2453 6899999999
Q ss_pred cCCCch----hhcccCCCcc
Q 005134 233 DGAGST----VRKLVGIDLV 248 (712)
Q Consensus 233 DG~~S~----VR~~lgi~~~ 248 (712)
+|.+|. ..+.+|+.+.
T Consensus 273 ~G~~s~~~~~~l~~~Gi~~~ 292 (549)
T 3nlc_A 273 VGHSARDTFEMLHERGVYME 292 (549)
T ss_dssp CCTTCHHHHHHHHHTTCCCE
T ss_pred CCCChhhHHHHHHHcCCCcc
Confidence 999994 4455676643
No 48
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.22 E-value=2.6e-10 Score=133.24 Aligned_cols=71 Identities=10% Similarity=0.063 Sum_probs=54.0
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEE
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VV 230 (712)
.+....+...|.+.+.+.|+ +|+++++|++++.+++++.|... +|. .+++||.||
T Consensus 408 ~v~p~~l~~aL~~~a~~~Gv-------------------~i~~~t~V~~l~~~~~~v~V~t~---~G~---~~i~Ad~VV 462 (689)
T 3pvc_A 408 WLCPSDLTHALMMLAQQNGM-------------------TCHYQHELQRLKRIDSQWQLTFG---QSQ---AAKHHATVI 462 (689)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEECSSSEEEEEC----CC---CCEEESEEE
T ss_pred EECHHHHHHHHHHHHHhCCC-------------------EEEeCCeEeEEEEeCCeEEEEeC---CCc---EEEECCEEE
Confidence 34567788889999988887 99999999999998888755442 331 158999999
Q ss_pred eccCCCch-hhcccCCC
Q 005134 231 GTDGAGST-VRKLVGID 246 (712)
Q Consensus 231 gADG~~S~-VR~~lgi~ 246 (712)
.|+|..|. +.+.++++
T Consensus 463 lAtG~~s~~l~~~~~lp 479 (689)
T 3pvc_A 463 LATGHRLPEWEQTHHLP 479 (689)
T ss_dssp ECCGGGTTCSTTTTTSC
T ss_pred ECCCcchhccccccCCc
Confidence 99999986 44444443
No 49
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.19 E-value=1.5e-10 Score=122.19 Aligned_cols=143 Identities=17% Similarity=0.271 Sum_probs=92.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCC-------CCceeecCHhHHHHHHhhhcHHHHHHhcCCCc
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFST-------HPQAHFINNRYALVFRKLDGLAEEIERSQPPV 112 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~~~-------~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~ 112 (712)
.++||+||||||+||++|+.|+++ |++|+||||.+.+.. ......+.+...+.|+++ |+ +.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~-Gv---------~~ 147 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEV-GV---------PY 147 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHH-TC---------CC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHc-CC---------cc
Confidence 468999999999999999999998 999999999876531 112233344555566555 43 11
Q ss_pred cccceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhc-CceeeccCccccccccccccceE
Q 005134 113 DLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREI 191 (712)
Q Consensus 113 ~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~v 191 (712)
.. .|. +. .......+...|.+.+.+. ++ ++
T Consensus 148 ~~----------~G~-~~-------------------~~~~~~d~~~~L~~~a~~~~gV-------------------~i 178 (344)
T 3jsk_A 148 ED----------EGD-YV-------------------VVKHAALFTSTVLSKVLQRPNV-------------------KL 178 (344)
T ss_dssp EE----------CSS-EE-------------------EESCHHHHHHHHHHHHHTCTTE-------------------EE
T ss_pred cc----------cCC-eE-------------------EEecHHHHHHHHHHHHHhCCCC-------------------EE
Confidence 00 010 00 0112345668888888774 54 99
Q ss_pred EeCcEEEEEEEcCC-------------------eEE-EEEEec---cCCc----eeeEEEEecEEEeccCCCchhhccc
Q 005134 192 LMGHECVSVSATDQ-------------------CIN-VIASFL---KEGK----CTERNIQCNILIGTDGAGSTVRKLV 243 (712)
Q Consensus 192 ~~g~~v~~v~~~~~-------------------~v~-v~v~~~---~~g~----~~~~~i~ad~VVgADG~~S~VR~~l 243 (712)
+++++++++..+++ .|. |.+... ..+. ....+|+|++||.|+|..|+|++.+
T Consensus 179 ~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 179 FNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp EETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred EeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 99999999987653 221 111110 1121 0235899999999999999977655
No 50
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.16 E-value=1.6e-10 Score=126.11 Aligned_cols=142 Identities=18% Similarity=0.229 Sum_probs=86.4
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCC------CCceee----cC--------Hh-HHHHHHhh--h
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST------HPQAHF----IN--------NR-YALVFRKL--D 99 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~------~~ra~~----i~--------~r-tmeilr~l--~ 99 (712)
|.++||+||||||+|+++|+.|+++|.+|+||||.+.+.. .++... .. +. ....+..+ .
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 3569999999999999999999999999999999875411 000000 00 00 00111111 0
Q ss_pred cHHHHHHhcCCCccccceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccc
Q 005134 100 GLAEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTE 179 (712)
Q Consensus 100 Gl~d~l~~~~~~~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~ 179 (712)
.+.+.+...+.+... ...|. .-|. . ....+...|.+.+++.|+
T Consensus 82 ~~~~~~~~~Gi~~~~--------~~~g~----------------~~p~---~-~~~~l~~~L~~~~~~~Gv--------- 124 (401)
T 2gqf_A 82 DFISLVAEQGITYHE--------KELGQ----------------LFCD---E-GAEQIVEMLKSECDKYGA--------- 124 (401)
T ss_dssp HHHHHHHHTTCCEEE--------CSTTE----------------EEET---T-CTHHHHHHHHHHHHHHTC---------
T ss_pred HHHHHHHhCCCceEE--------CcCCE----------------EccC---C-CHHHHHHHHHHHHHHCCC---------
Confidence 111111222211100 00000 0010 1 456777888888888887
Q ss_pred cccccccccceEEeCcEEEEEEEc----CCeEEEEEEeccCCceeeEEEEecEEEeccCCCc
Q 005134 180 GLHNHLLQGREILMGHECVSVSAT----DQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (712)
Q Consensus 180 ~~~~~~~~~~~v~~g~~v~~v~~~----~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (712)
+++++++++++..+ ++++.++. +++ +++||+||.|+|.+|
T Consensus 125 ----------~i~~~~~v~~i~~~~~g~~~~~~v~~---~~g-----~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 125 ----------KILLRSEVSQVERIQNDEKVRFVLQV---NST-----QWQCKNLIVATGGLS 168 (401)
T ss_dssp ----------EEECSCCEEEEEECCSCSSCCEEEEE---TTE-----EEEESEEEECCCCSS
T ss_pred ----------EEEeCCEEEEEEcccCcCCCeEEEEE---CCC-----EEECCEEEECCCCcc
Confidence 99999999999876 55555433 122 589999999999999
No 51
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.15 E-value=5.7e-11 Score=129.95 Aligned_cols=70 Identities=16% Similarity=0.223 Sum_probs=50.4
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEE---------EEEEcCCeEEEEEEeccCCceee
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECV---------SVSATDQCINVIASFLKEGKCTE 221 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~---------~v~~~~~~v~v~v~~~~~g~~~~ 221 (712)
.+....+...|.+.+.+.|+ +++++++|+ +++.+++.+.+.. ++|
T Consensus 168 ~v~~~~l~~~L~~~~~~~Gv-------------------~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~---~~g---- 221 (405)
T 3c4n_A 168 TYRPGSLALLAAQQAIGQGA-------------------GLLLNTRAELVPGGVRLHRLTVTNTHQIVVH---ETR---- 221 (405)
T ss_dssp EECHHHHHHHHHHHHHTTTC-------------------EEECSCEEEEETTEEEEECBCC-------CB---CCE----
T ss_pred EEcHHHHHHHHHHHHHHCCC-------------------EEEcCCEEEeccccccccceEeeCCeEEEEE---CCc----
Confidence 45667789999999988887 899999999 8887776653321 122
Q ss_pred EEEEecEEEeccCCCc-hhhc-ccCCCc
Q 005134 222 RNIQCNILIGTDGAGS-TVRK-LVGIDL 247 (712)
Q Consensus 222 ~~i~ad~VVgADG~~S-~VR~-~lgi~~ 247 (712)
+++||+||.|+|++| .+++ .+|+..
T Consensus 222 -~i~a~~VV~A~G~~s~~l~~~~~g~~~ 248 (405)
T 3c4n_A 222 -QIRAGVIIVAAGAAGPALVEQGLGLHT 248 (405)
T ss_dssp -EEEEEEEEECCGGGHHHHHHHHHCCCC
T ss_pred -EEECCEEEECCCccHHHHHHHhcCCCC
Confidence 689999999999999 6887 787653
No 52
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.14 E-value=4.6e-10 Score=124.71 Aligned_cols=63 Identities=17% Similarity=0.241 Sum_probs=47.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCC------CCEEEEcCCCCCCCCC---------------ceeecCHhHHHHHHhhhc
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLG------IKCSVLEKNKAFSTHP---------------QAHFINNRYALVFRKLDG 100 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~G------i~v~lvEr~~~~~~~~---------------ra~~i~~rtmeilr~l~G 100 (712)
+.+||+|||||++||++|+.|+++| ++|+|+|+++.+--.. ......+..+++++++ |
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~l-g 82 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDL-G 82 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHHT-T
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHHc-C
Confidence 3579999999999999999999999 9999999986542110 0122356788889888 8
Q ss_pred HHHHH
Q 005134 101 LAEEI 105 (712)
Q Consensus 101 l~d~l 105 (712)
+.+.+
T Consensus 83 l~~~~ 87 (470)
T 3i6d_A 83 LEHLL 87 (470)
T ss_dssp CCTTE
T ss_pred Cccee
Confidence 76544
No 53
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.14 E-value=4.5e-10 Score=123.27 Aligned_cols=35 Identities=34% Similarity=0.514 Sum_probs=32.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
+||+|||||++||++|+.|+++|.+|+|+||++.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 48999999999999999999999999999998764
No 54
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.12 E-value=6.3e-10 Score=118.56 Aligned_cols=35 Identities=34% Similarity=0.415 Sum_probs=32.6
Q ss_pred cCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar---~Gi~v~lvEr~~~~ 78 (712)
.||+|||||++||++|+.|++ +|++|+||||.+.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 589999999999999999999 99999999998653
No 55
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.12 E-value=4.9e-10 Score=112.72 Aligned_cols=134 Identities=18% Similarity=0.165 Sum_probs=88.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEee
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~ 121 (712)
+++||+||||||+|+.+|+.|+++|++|+|||+..... + ..+++. +.++ .
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~--G--~~~~~~-------~~~~---------~---------- 51 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAV--M--MPFLPP-------KPPF---------P---------- 51 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT--T--CCSSCC-------CSCC---------C----------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcC--C--cccCcc-------cccc---------c----------
Confidence 45899999999999999999999999999999984210 0 001110 0000 0
Q ss_pred ecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhc-CceeeccCccccccccccccceEEeCcEEEEE
Q 005134 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 122 ~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
.+..+..++ + . ..| ++..+...|.+.+++. |+ +++ +++++++
T Consensus 52 ---~~~~~~~~~-----d--~-~g~------~~~~~~~~l~~~~~~~~gv-------------------~i~-~~~v~~i 94 (232)
T 2cul_A 52 ---PGSLLERAY-----D--P-KDE------RVWAFHARAKYLLEGLRPL-------------------HLF-QATATGL 94 (232)
T ss_dssp ---TTCHHHHHC-----C--T-TCC------CHHHHHHHHHHHHHTCTTE-------------------EEE-ECCEEEE
T ss_pred ---hhhHHhhhc-----c--C-CCC------CHHHHHHHHHHHHHcCCCc-------------------EEE-EeEEEEE
Confidence 000000000 0 0 011 5778889999998886 65 777 5799999
Q ss_pred EEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCCCcc
Q 005134 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLV 248 (712)
Q Consensus 201 ~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~ 248 (712)
..+++.+.. +.. .+|+ +++||+||.|+|.+|..+..+|....
T Consensus 95 ~~~~~~v~~-v~~-~~g~----~i~a~~VV~A~G~~s~~~~~~G~~~~ 136 (232)
T 2cul_A 95 LLEGNRVVG-VRT-WEGP----PARGEKVVLAVGSFLGARLFLGGVVE 136 (232)
T ss_dssp EEETTEEEE-EEE-TTSC----CEECSEEEECCTTCSSCEEEETTEEE
T ss_pred EEeCCEEEE-EEE-CCCC----EEECCEEEECCCCChhhceecCCccC
Confidence 888777532 222 2442 68999999999999999988776543
No 56
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.10 E-value=4.7e-10 Score=128.07 Aligned_cols=162 Identities=16% Similarity=0.164 Sum_probs=96.8
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC--ceeecCHhHHHHHHhhhcH-----------------
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP--QAHFINNRYALVFRKLDGL----------------- 101 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~--ra~~i~~rtmeilr~l~Gl----------------- 101 (712)
..++||||||||++||++|+.|+++|.+|+||||.+.+.... .+..++....+..+.+ |+
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~-g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAH-GVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHT-TCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHh-CCCCCHHHHHHHHHHhcCC
Confidence 456899999999999999999999999999999998653211 1111111111111111 11
Q ss_pred -----------------HHHHHhcCCCccccceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHH
Q 005134 102 -----------------AEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQ 164 (712)
Q Consensus 102 -----------------~d~l~~~~~~~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~ 164 (712)
.+.+.+.+.+... .....|.. +.....|. ...+....+...|.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~------~~~~~g~~-----------~~r~~~~~-~~~~~~~~l~~~L~~~ 259 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDD------LKRSGGAR-----------VDRTHRPH-GGKSSGPEIIDTLRKA 259 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE------EECCTTCS-----------SCCEEECS-SSSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCcccc------ccccCCCC-----------CCceeecC-CCCCCHHHHHHHHHHH
Confidence 1111111211100 00000000 00000010 0113456788899999
Q ss_pred HHhcCceeeccCccccccccccccceEEeCcEEEEEEEcC-CeEE-EEEEeccCCceeeEEEEecEEEeccCCCchhhcc
Q 005134 165 LEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATD-QCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKL 242 (712)
Q Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~-~~v~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~ 242 (712)
+.+.|+ +|+++++|+++..++ +.|+ |++.. .+|+ ..+++||.||.|+|..|.+|+.
T Consensus 260 ~~~~gv-------------------~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~--~~~i~A~~VVlAtGg~s~~~~~ 317 (566)
T 1qo8_A 260 AKEQGI-------------------DTRLNSRVVKLVVNDDHSVVGAVVHG-KHTG--YYMIGAKSVVLATGGYGMNKEM 317 (566)
T ss_dssp HHHTTC-------------------CEECSEEEEEEEECTTSBEEEEEEEE-TTTE--EEEEEEEEEEECCCCCTTCHHH
T ss_pred HHhcCC-------------------EEEeCCEEEEEEECCCCcEEEEEEEe-CCCc--EEEEEcCEEEEecCCcccCHHH
Confidence 988887 999999999999887 6554 44442 2342 4579999999999999987654
Q ss_pred c
Q 005134 243 V 243 (712)
Q Consensus 243 l 243 (712)
+
T Consensus 318 ~ 318 (566)
T 1qo8_A 318 I 318 (566)
T ss_dssp H
T ss_pred H
Confidence 4
No 57
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.07 E-value=1.1e-09 Score=117.97 Aligned_cols=60 Identities=12% Similarity=0.127 Sum_probs=47.8
Q ss_pred cChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEEe
Q 005134 152 FSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIG 231 (712)
Q Consensus 152 i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVg 231 (712)
+....+...|.+.+.+.|+ +++++++|++++.+++++.++. .+| +++||.||.
T Consensus 146 ~~~~~l~~~l~~~~~~~G~-------------------~i~~~~~V~~i~~~~~~~~v~~---~~g-----~~~a~~vV~ 198 (372)
T 2uzz_A 146 LRSELAIKTWIQLAKEAGC-------------------AQLFNCPVTAIRHDDDGVTIET---ADG-----EYQAKKAIV 198 (372)
T ss_dssp EEHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEECSSSEEEEE---SSC-----EEEEEEEEE
T ss_pred EcHHHHHHHHHHHHHHCCC-------------------EEEcCCEEEEEEEcCCEEEEEE---CCC-----eEEcCEEEE
Confidence 3445778888888888887 9999999999998887765543 233 489999999
Q ss_pred ccCCCch
Q 005134 232 TDGAGST 238 (712)
Q Consensus 232 ADG~~S~ 238 (712)
|+|++|.
T Consensus 199 a~G~~s~ 205 (372)
T 2uzz_A 199 CAGTWVK 205 (372)
T ss_dssp CCGGGGG
T ss_pred cCCccHH
Confidence 9999874
No 58
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.06 E-value=1.1e-09 Score=125.12 Aligned_cols=160 Identities=15% Similarity=0.175 Sum_probs=93.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCc--eeecCHhHHHHHHhhhcH-----------------
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQ--AHFINNRYALVFRKLDGL----------------- 101 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~r--a~~i~~rtmeilr~l~Gl----------------- 101 (712)
..++||||||||++||++|+.|+++|.+|+||||.+....... +..++.......+++ |+
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~-g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAK-KITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHT-TCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHh-CCCCCHHHHHHHHHHhcCC
Confidence 3468999999999999999999999999999999986532110 111111001111222 21
Q ss_pred -----------------HHHHHhcCCCccccceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHH
Q 005134 102 -----------------AEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQ 164 (712)
Q Consensus 102 -----------------~d~l~~~~~~~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~ 164 (712)
.+.+.+.+.+... .....|.. +.....+.. .......+...|.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~------~~~~~g~~-----------~~r~~~~~~-g~~~g~~l~~~L~~~ 264 (571)
T 1y0p_A 203 INDPALVKVLSSHSKDSVDWMTAMGADLTD------VGMMGGAS-----------VNRAHRPTG-GAGVGAHVVQVLYDN 264 (571)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE------EECCTTCS-----------SCCEEESTT-TCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCCCcc------CcccCCcC-----------CCeeEecCC-CCCCHHHHHHHHHHH
Confidence 0111111111100 00000100 000000000 012346788889999
Q ss_pred HHhcCceeeccCccccccccccccceEEeCcEEEEEEEcC-CeEE-EEEEeccCCceeeEEEEecEEEeccCCCchhhc
Q 005134 165 LEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATD-QCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRK 241 (712)
Q Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~-~~v~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~ 241 (712)
+++.|+ +|+++++|+++..++ +.|+ |++.. .+|+ ..+|+||.||.|+|..|..++
T Consensus 265 ~~~~gv-------------------~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~--~~~i~a~~VVlAtGg~~~n~~ 321 (571)
T 1y0p_A 265 AVKRNI-------------------DLRMNTRGIEVLKDDKGTVKGILVKG-MYKG--YYWVKADAVILATGGFAKNNE 321 (571)
T ss_dssp HHHTTC-------------------EEESSEEEEEEEECTTSCEEEEEEEE-TTTE--EEEEECSEEEECCCCCTTCHH
T ss_pred HHhcCC-------------------EEEeCCEeeEeEEcCCCeEEEEEEEe-CCCc--EEEEECCeEEEeCCCcccCHH
Confidence 988887 999999999999876 5554 44442 1342 457999999999999987554
No 59
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.05 E-value=8.5e-10 Score=117.46 Aligned_cols=131 Identities=15% Similarity=0.208 Sum_probs=86.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEee
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~ 121 (712)
.++||+||||||+||++|+.|+++|++|+|||+.+.+. +...+ .++++ ....+.
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~g----g~~~~--------~~~~~-----~~~~~~--------- 55 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPG----GAWQH--------AWHSL-----HLFSPA--------- 55 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSS----GGGGG--------SCTTC-----BCSSCG---------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC----CcccC--------CCCCc-----EecCch---------
Confidence 45899999999999999999999999999999987542 11000 00000 000000
Q ss_pred ecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEE
Q 005134 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (712)
Q Consensus 122 ~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~ 201 (712)
....+. .+. .........++..+...|.+.+++.++ +++++++|++++
T Consensus 56 ------~~~~~~-----~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~~v~~i~ 103 (357)
T 4a9w_A 56 ------GWSSIP-----GWP--MPASQGPYPARAEVLAYLAQYEQKYAL-------------------PVLRPIRVQRVS 103 (357)
T ss_dssp ------GGSCCS-----SSC--CCCCSSSSCBHHHHHHHHHHHHHHTTC-------------------CEECSCCEEEEE
T ss_pred ------hhhhCC-----CCC--CCCCccCCCCHHHHHHHHHHHHHHcCC-------------------EEEcCCEEEEEE
Confidence 000000 000 001112234577888889988888887 899999999999
Q ss_pred EcCCeEE-EEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 202 ATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 202 ~~~~~v~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
.+++.++ ++. +++ ++++|+||.|+|.+|.
T Consensus 104 ~~~~~~~~v~~---~~g-----~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 104 HFGERLRVVAR---DGR-----QWLARAVISATGTWGE 133 (357)
T ss_dssp EETTEEEEEET---TSC-----EEEEEEEEECCCSGGG
T ss_pred ECCCcEEEEEe---CCC-----EEEeCEEEECCCCCCC
Confidence 9888765 442 233 6899999999999874
No 60
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.04 E-value=5.4e-10 Score=118.24 Aligned_cols=125 Identities=18% Similarity=0.216 Sum_probs=85.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
.+.+||+||||||+||++|+.|+++|++|+|||+.+.....+.+.... . .
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~---------~----------~----------- 69 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT---------T----------T----------- 69 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG---------S----------S-----------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc---------c----------h-----------
Confidence 456899999999999999999999999999999977332222211000 0 0
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
.+..+ |.....+....+...|.+.+.+.++ ++++++ ++++
T Consensus 70 -------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~gv-------------------~i~~~~-v~~i 109 (338)
T 3itj_A 70 -------EIENF-------------PGFPDGLTGSELMDRMREQSTKFGT-------------------EIITET-VSKV 109 (338)
T ss_dssp -------EECCS-------------TTCTTCEEHHHHHHHHHHHHHHTTC-------------------EEECSC-EEEE
T ss_pred -------hhccc-------------CCCcccCCHHHHHHHHHHHHHHcCC-------------------EEEEeE-EEEE
Confidence 00000 0001124456778888888888876 899998 9999
Q ss_pred EEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 201 ~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
+.+++.++++.....++ .++.+|+||.|.|.++..
T Consensus 110 ~~~~~~~~v~~~~~~~~----~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 110 DLSSKPFKLWTEFNEDA----EPVTTDAIILATGASAKR 144 (338)
T ss_dssp ECSSSSEEEEETTCSSS----CCEEEEEEEECCCEEECC
T ss_pred EEcCCEEEEEEEecCCC----cEEEeCEEEECcCCCcCC
Confidence 98888877655321223 368999999999997643
No 61
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.02 E-value=2.3e-09 Score=113.47 Aligned_cols=127 Identities=21% Similarity=0.295 Sum_probs=86.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
+.++||+||||||+|+++|+.|+++|++|+|||+.+... |.... . .+.. .
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------------------g~~~~---~-~~~~----~-- 52 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG--------------------GQLTA---L-YPEK----Y-- 52 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC--------------------HHHHH---T-CTTS----E--
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC--------------------Ceeec---c-CCCc----e--
Confidence 456899999999999999999999999999999986531 11100 0 1110 0
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
+... +. ...+....+...|.+.+.+.+. +++++++|+++
T Consensus 53 --------~~~~-------------~~-~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~~v~~i 91 (335)
T 2zbw_A 53 --------IYDV-------------AG-FPKVYAKDLVKGLVEQVAPFNP-------------------VYSLGERAETL 91 (335)
T ss_dssp --------ECCS-------------TT-CSSEEHHHHHHHHHHHHGGGCC-------------------EEEESCCEEEE
T ss_pred --------eecc-------------CC-CCCCCHHHHHHHHHHHHHHcCC-------------------EEEeCCEEEEE
Confidence 0000 00 0013345666777777777665 88999999999
Q ss_pred EEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccCC
Q 005134 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGI 245 (712)
Q Consensus 201 ~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi 245 (712)
+.+++.+++++. +|. ++++|+||.|+|.+|...+.+++
T Consensus 92 ~~~~~~~~v~~~---~g~----~~~~~~lv~AtG~~~~~p~~~~i 129 (335)
T 2zbw_A 92 EREGDLFKVTTS---QGN----AYTAKAVIIAAGVGAFEPRRIGA 129 (335)
T ss_dssp EEETTEEEEEET---TSC----EEEEEEEEECCTTSEEEECCCCC
T ss_pred EECCCEEEEEEC---CCC----EEEeCEEEECCCCCCCCCCCCCC
Confidence 988776555432 342 68999999999999866655543
No 62
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.02 E-value=1.1e-09 Score=121.18 Aligned_cols=70 Identities=10% Similarity=-0.056 Sum_probs=53.4
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEE
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VV 230 (712)
..++..+.+.|.+.+.+.+. .++++++|++++.++++++|++....+|+. .+++++|+||
T Consensus 111 ~~~~~~l~~~l~~~~~~~~~-------------------~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~-~~~~~~d~VV 170 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLLP-------------------FIKLATDVLDIEKKDGSWVVTYKGTKAGSP-ISKDIFDAVS 170 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGGG-------------------GEECSEEEEEEEEETTEEEEEEEESSTTCC-EEEEEESEEE
T ss_pred CCCHHHHHHHHHHHHHHhhC-------------------eEEeCCEEEEEEeCCCeEEEEEeecCCCCe-eEEEEeCEEE
Confidence 35677888888888877654 789999999999988888888764222420 2468999999
Q ss_pred eccCCCchhh
Q 005134 231 GTDGAGSTVR 240 (712)
Q Consensus 231 gADG~~S~VR 240 (712)
.|+|.+|.-+
T Consensus 171 vAtG~~s~p~ 180 (447)
T 2gv8_A 171 ICNGHYEVPY 180 (447)
T ss_dssp ECCCSSSSBC
T ss_pred ECCCCCCCCC
Confidence 9999987533
No 63
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.02 E-value=3.2e-09 Score=116.40 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=33.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
+||+|||||++||++|+.|+++|.+|+|||+++.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 48999999999999999999999999999998765
No 64
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.00 E-value=1.6e-09 Score=116.19 Aligned_cols=125 Identities=16% Similarity=0.286 Sum_probs=86.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEee
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~ 121 (712)
..+||+||||||+||++|+.|+++|++|+|||+.+.+. |....+ .+.. .
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------------------g~~~~~----~~~~----~--- 61 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG--------------------GQLAAL----YPEK----H--- 61 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--------------------HHHHHT----CTTS----E---
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC--------------------Cccccc----CCCc----c---
Confidence 45899999999999999999999999999999986531 111000 1110 0
Q ss_pred ecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEE
Q 005134 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (712)
Q Consensus 122 ~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~ 201 (712)
+... |. ...+.+..+...|.+.+.+.++ +++++++|++++
T Consensus 62 -------~~~~-------------~~-~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~~v~~i~ 101 (360)
T 3ab1_A 62 -------IYDV-------------AG-FPEVPAIDLVESLWAQAERYNP-------------------DVVLNETVTKYT 101 (360)
T ss_dssp -------ECCS-------------TT-CSSEEHHHHHHHHHHHHHTTCC-------------------EEECSCCEEEEE
T ss_pred -------cccC-------------CC-CCCCCHHHHHHHHHHHHHHhCC-------------------EEEcCCEEEEEE
Confidence 0000 00 0123456677778888877776 889999999999
Q ss_pred EcCC-eEEEEEEeccCCceeeEEEEecEEEeccCCCchhhcccC
Q 005134 202 ATDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVG 244 (712)
Q Consensus 202 ~~~~-~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lg 244 (712)
.+++ .+++++. +|. ++++|+||.|+|.+|..++.++
T Consensus 102 ~~~~~~~~v~~~---~g~----~~~~~~li~AtG~~~~~~~~~~ 138 (360)
T 3ab1_A 102 KLDDGTFETRTN---TGN----VYRSRAVLIAAGLGAFEPRKLP 138 (360)
T ss_dssp ECTTSCEEEEET---TSC----EEEEEEEEECCTTCSCCBCCCG
T ss_pred ECCCceEEEEEC---CCc----EEEeeEEEEccCCCcCCCCCCC
Confidence 8765 5555542 442 6899999999999987666554
No 65
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.99 E-value=4.5e-09 Score=120.54 Aligned_cols=71 Identities=14% Similarity=0.204 Sum_probs=53.1
Q ss_pred hhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEE-EEEEeccCCceeeEEEEecEEEec
Q 005134 154 QYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGT 232 (712)
Q Consensus 154 q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~VVgA 232 (712)
...+...|.+.+.+.|. ++|+++++++++..+++.|. +.+....+|+ ..+++|+.||.|
T Consensus 133 g~~l~~~L~~~~~~~gn------------------v~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~--~~~i~A~~VVlA 192 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQ------------------IQRFDEHFVLDILVDDGHVRGLVAMNMMEGT--LVQIRANAVVMA 192 (602)
T ss_dssp HHHHHHHHHHHHTTCTT------------------EEEEETEEEEEEEEETTEEEEEEEEETTTTE--EEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHhCCC------------------cEEEeCCEEEEEEEeCCEEEEEEEEEcCCCc--EEEEEcCeEEEC
Confidence 35788888888887771 39999999999998777543 3333323453 457999999999
Q ss_pred cCCCchhhcccC
Q 005134 233 DGAGSTVRKLVG 244 (712)
Q Consensus 233 DG~~S~VR~~lg 244 (712)
+|..|.++....
T Consensus 193 tGg~s~~~~~~~ 204 (602)
T 1kf6_A 193 TGGAGRVYRYNT 204 (602)
T ss_dssp CCCCGGGSSSBS
T ss_pred CCCCcccccCcC
Confidence 999999986653
No 66
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.98 E-value=5.2e-08 Score=109.13 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=46.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC------------ceee---cCHhHHHHHHhhhcHHHH
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP------------QAHF---INNRYALVFRKLDGLAEE 104 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~------------ra~~---i~~rtmeilr~l~Gl~d~ 104 (712)
++||+|||||++||++|..|+++|++|+|+|+++.+--+- .++. ..++.+++++++ |+.++
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~l-gl~~~ 114 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRY-KMHNA 114 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHT-TCTTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHc-CCcce
Confidence 4799999999999999999999999999999997542111 1122 246777888877 77543
No 67
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.98 E-value=5.1e-09 Score=119.11 Aligned_cols=154 Identities=16% Similarity=0.207 Sum_probs=92.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC-CCCCCc---eeecCH-hHHHHHHhhhcHHHHHHh-cCCCcccc
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA-FSTHPQ---AHFINN-RYALVFRKLDGLAEEIER-SQPPVDLW 115 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~-~~~~~r---a~~i~~-rtmeilr~l~Gl~d~l~~-~~~~~~~~ 115 (712)
.++||+|||||++|+++|+.|++.|.+|+|||+... ....++ ..++.. ...+.++.++|+...+.. .+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~g------ 100 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAG------ 100 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHE------
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcc------
Confidence 458999999999999999999999999999999842 222222 112221 122233333222111111 00
Q ss_pred ceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHh-cCceeeccCccccccccccccceEEeC
Q 005134 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMG 194 (712)
Q Consensus 116 ~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~v~~g 194 (712)
..+.......|.. .......+++..+...|.+.+++ .|+ ++ ++
T Consensus 101 i~f~~l~~~kgpa----------------v~~~r~~~Dr~~~~~~L~e~Le~~~GV-------------------~I-~~ 144 (651)
T 3ces_A 101 IQFRILNASKGPA----------------VRATRAQADRVLYRQAVRTALENQPNL-------------------MI-FQ 144 (651)
T ss_dssp EEEEEESTTSCGG----------------GCEEEEEECHHHHHHHHHHHHHTCTTE-------------------EE-EE
T ss_pred cchhhhhcccCcc----------------cccchhhCCHHHHHHHHHHHHHhCCCC-------------------EE-EE
Confidence 0011100000000 00011346777888889998887 465 77 67
Q ss_pred cEEEEEEEcCCeEE-EEEEeccCCceeeEEEEecEEEeccCCCchhhcccC
Q 005134 195 HECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVG 244 (712)
Q Consensus 195 ~~v~~v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lg 244 (712)
++|+.+..+++.|. |.+ .+| .+++||.||.|+|.+|..+...|
T Consensus 145 ~~V~~L~~e~g~V~GV~t---~dG----~~I~Ad~VVLATGt~s~~~~i~G 188 (651)
T 3ces_A 145 QAVEDLIVENDRVVGAVT---QMG----LKFRAKAVVLTVGTFLDGKIHIG 188 (651)
T ss_dssp CCEEEEEESSSBEEEEEE---TTS----EEEEEEEEEECCSTTTCCEEECC
T ss_pred EEEEEEEecCCEEEEEEE---CCC----CEEECCEEEEcCCCCccCccccC
Confidence 79999988777653 332 244 36899999999999987765543
No 68
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.96 E-value=4.9e-09 Score=118.71 Aligned_cols=37 Identities=35% Similarity=0.503 Sum_probs=34.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..++||||||||++||++|+.|++ |.+|+||||.+..
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~ 42 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVT 42 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTT
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCC
Confidence 567999999999999999999999 9999999998754
No 69
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.94 E-value=2.2e-08 Score=112.67 Aligned_cols=38 Identities=26% Similarity=0.432 Sum_probs=35.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
+.++||||||||++||++|+.|+++|.+|+||||.+..
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 46799999999999999999999999999999999865
No 70
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.93 E-value=1.2e-08 Score=115.63 Aligned_cols=152 Identities=15% Similarity=0.165 Sum_probs=91.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC-CCCCCCc---eeecCH-hHHHHHHhhhcHHHHHHh-cCCCcccc
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK-AFSTHPQ---AHFINN-RYALVFRKLDGLAEEIER-SQPPVDLW 115 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~-~~~~~~r---a~~i~~-rtmeilr~l~Gl~d~l~~-~~~~~~~~ 115 (712)
.++||+|||||++|+++|+.|++.|++|+|||+.. .....++ ..++.. ...+.++.++|+...+.. .+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi----- 100 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGI----- 100 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEE-----
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhccc-----
Confidence 45999999999999999999999999999999984 2222121 112221 222333333222222111 110
Q ss_pred ceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhc-CceeeccCccccccccccccceEEeC
Q 005134 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMG 194 (712)
Q Consensus 116 ~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~v~~g 194 (712)
.+.......|... ......+++..+...|.+.+++. |+ ++ ++
T Consensus 101 -~f~~l~~~kGpav----------------~~~r~~~Dr~~~~~~L~~~Le~~~GV-------------------eI-~~ 143 (637)
T 2zxi_A 101 -QFKMLNTRKGKAV----------------QSPRAQADKKRYREYMKKVCENQENL-------------------YI-KQ 143 (637)
T ss_dssp -EEEEESTTSCGGG----------------CEEEEEECHHHHHHHHHHHHHTCTTE-------------------EE-EE
T ss_pred -ceeecccccCccc----------------cchhhhCCHHHHHHHHHHHHHhCCCC-------------------EE-EE
Confidence 0111000000000 00112456778888999988874 55 77 57
Q ss_pred cEEEEEEEcCCeEE-EEEEeccCCceeeEEEEecEEEeccCCCchhhcc
Q 005134 195 HECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKL 242 (712)
Q Consensus 195 ~~v~~v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~ 242 (712)
++|+++..+++.|. |.+ .+|. +++|+.||.|+|..|..+..
T Consensus 144 ~~Vt~L~~e~g~V~GV~t---~dG~----~i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 144 EEVVDIIVKNNQVVGVRT---NLGV----EYKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp SCEEEEEESSSBEEEEEE---TTSC----EEECSEEEECCTTCBTCEEE
T ss_pred eEEEEEEecCCEEEEEEE---CCCc----EEEeCEEEEccCCCccCcee
Confidence 89999988777654 332 2452 68999999999999876654
No 71
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.93 E-value=1e-07 Score=108.65 Aligned_cols=73 Identities=19% Similarity=0.083 Sum_probs=54.3
Q ss_pred cChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEE-EEEEeccCCceeeEEEEecEEE
Q 005134 152 FSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILI 230 (712)
Q Consensus 152 i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~VV 230 (712)
+.-..+...|.+.+.+.|+ +|+++++|+++..+++.|. |++.+..+|+ ..+|+||.||
T Consensus 185 v~~~~l~~~l~~~a~~~Ga-------------------~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~--~~~i~A~~VV 243 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGA-------------------YLVSKMKAVGFLYEGDQIVGVKARDLLTDE--VIEIKAKLVI 243 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTC-------------------EEESSEEEEEEEEETTEEEEEEEEETTTCC--EEEEEBSCEE
T ss_pred EchHHHHHHHHHHHHHcCC-------------------eEEeccEEEEEEEeCCEEEEEEEEEcCCCC--EEEEEcCEEE
Confidence 4455677778888888887 9999999999998877643 5554332343 3479999999
Q ss_pred eccCCCc-hhhcccCC
Q 005134 231 GTDGAGS-TVRKLVGI 245 (712)
Q Consensus 231 gADG~~S-~VR~~lgi 245 (712)
.|.|++| .+++.+++
T Consensus 244 ~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 244 NTSGPWVDKVRNLNFT 259 (571)
T ss_dssp ECCGGGHHHHHTTCCS
T ss_pred ECCChhHHHHHHhhcc
Confidence 9999998 46666554
No 72
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.91 E-value=1e-08 Score=107.62 Aligned_cols=144 Identities=19% Similarity=0.261 Sum_probs=87.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCCC-------CceeecCHhHHHHHHhhhcHHHHHHhcCCCc
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTH-------PQAHFINNRYALVFRKLDGLAEEIERSQPPV 112 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~~~~-------~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~ 112 (712)
.++||+||||||+||++|+.|+++ |.+|+||||.+.+... .+...+.+...+.|..+ | .+.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~-G---------v~~ 133 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQEL-E---------IPY 133 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHT-T---------CCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhh-C---------ccc
Confidence 457999999999999999999999 9999999998765211 11122222233333333 2 111
Q ss_pred cccceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhc-CceeeccCccccccccccccceE
Q 005134 113 DLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREI 191 (712)
Q Consensus 113 ~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~v 191 (712)
.. .|.. ........+...|++++.+. |+ ++
T Consensus 134 ~~----------~g~~--------------------~~~~~~~~~~~~L~~~a~~~~GV-------------------~i 164 (326)
T 2gjc_A 134 ED----------EGDY--------------------VVVKHAALFISTVLSKVLQLPNV-------------------KL 164 (326)
T ss_dssp EE----------CSSE--------------------EEESCHHHHHHHHHHHHHTSTTE-------------------EE
T ss_pred cc----------CCCe--------------------EEEcchHHHHHHHHHHHHHhcCc-------------------EE
Confidence 00 0100 00112346677888888775 54 99
Q ss_pred EeCcEEEEEEEcC----C--eEE-EEEEec---cCC----ceeeEEEEe---------------cEEEeccCCCchhhcc
Q 005134 192 LMGHECVSVSATD----Q--CIN-VIASFL---KEG----KCTERNIQC---------------NILIGTDGAGSTVRKL 242 (712)
Q Consensus 192 ~~g~~v~~v~~~~----~--~v~-v~v~~~---~~g----~~~~~~i~a---------------d~VVgADG~~S~VR~~ 242 (712)
+.+++++++..++ + .|+ |.+... .+| .....+|+| ++||.|+|..|++.+.
T Consensus 165 ~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~ 244 (326)
T 2gjc_A 165 FNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAF 244 (326)
T ss_dssp ETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSH
T ss_pred EecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHH
Confidence 9999999998773 2 332 222110 111 001357999 9999999999998876
Q ss_pred cC
Q 005134 243 VG 244 (712)
Q Consensus 243 lg 244 (712)
+.
T Consensus 245 ~~ 246 (326)
T 2gjc_A 245 CA 246 (326)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 73
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.90 E-value=7.9e-09 Score=114.81 Aligned_cols=152 Identities=17% Similarity=0.237 Sum_probs=85.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCC-----CCEEEEcCCCCCCCCCceeecCHhHH--HHHHhhhcHHHHHHhcCCCccc
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLG-----IKCSVLEKNKAFSTHPQAHFINNRYA--LVFRKLDGLAEEIERSQPPVDL 114 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~G-----i~v~lvEr~~~~~~~~ra~~i~~rtm--eilr~l~Gl~d~l~~~~~~~~~ 114 (712)
..+||+||||||+||++|+.|+++| ++|+||||.+....++.. .+....+ ..++.+ .....|...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~-~~~~~~~~~~~~~~l-------~~~~~p~~~ 100 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNT-LVSQSELQISFLKDL-------VSLRNPTSP 100 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGG-CCSSCBCSSCTTSSS-------STTTCTTCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCC-CCCCCcCCcchhhcc-------ccccCCCCC
Confidence 4579999999999999999999999 999999999865422210 0000000 000000 000000000
Q ss_pred cceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeC
Q 005134 115 WRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMG 194 (712)
Q Consensus 115 ~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g 194 (712)
+....|... .+.. ..+ ........++..+...|...+.+.+. +++++
T Consensus 101 ~~~~~~l~~-~~~~---------~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~-------------------~i~~~ 147 (463)
T 3s5w_A 101 YSFVNYLHK-HDRL---------VDF----INLGTFYPCRMEFNDYLRWVASHFQE-------------------QSRYG 147 (463)
T ss_dssp TSHHHHHHH-TTCH---------HHH----HHHCCSCCBHHHHHHHHHHHHTTCTT-------------------TEEES
T ss_pred CChhHhhhh-cCce---------eec----ccccCCCCCHHHHHHHHHHHHHHcCC-------------------eEEeC
Confidence 000000000 0000 000 00111234677888888888777765 89999
Q ss_pred cEEEEEEEc---CCe--EEEEEEeccCCceeeEEEEecEEEeccCCCc
Q 005134 195 HECVSVSAT---DQC--INVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (712)
Q Consensus 195 ~~v~~v~~~---~~~--v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (712)
++|++++.+ +.. +++++.. |+++++++++|+||.|.|...
T Consensus 148 ~~V~~i~~~~~~~~~~~~~V~~~~---g~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 148 EEVLRIEPMLSAGQVEALRVISRN---ADGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEE---TTSCEEEEEESEEEECCCCEE
T ss_pred CEEEEEEEecCCCceEEEEEEEec---CCCceEEEEeCEEEECCCCCC
Confidence 999999876 332 3455442 222345899999999999844
No 74
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.90 E-value=1.1e-08 Score=113.13 Aligned_cols=70 Identities=19% Similarity=0.275 Sum_probs=53.0
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE---------------cCCeEEEEEEecc
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA---------------TDQCINVIASFLK 215 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~---------------~~~~v~v~v~~~~ 215 (712)
.+....+...|.+.+.+.|+ +++++++|++++. +++++. .+.. +
T Consensus 177 ~~~~~~l~~~L~~~~~~~Gv-------------------~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~-~V~t-~ 235 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGAGV-------------------EFIFGRRVVGVELKPRVELGIEGEPLPWQEARAS-AAVL-S 235 (448)
T ss_dssp ECCHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEE-EEEE-T
T ss_pred EEcHHHHHHHHHHHHHhCCC-------------------EEEcCCeEEEEEecccccccccccccccCCCceE-EEEe-C
Confidence 35566888889999988887 9999999999987 555542 2222 2
Q ss_pred CCceeeEEE--EecEEEeccCCCch-hhcccCCC
Q 005134 216 EGKCTERNI--QCNILIGTDGAGST-VRKLVGID 246 (712)
Q Consensus 216 ~g~~~~~~i--~ad~VVgADG~~S~-VR~~lgi~ 246 (712)
+| ++ +||.||.|.|++|. +.+.+|+.
T Consensus 236 ~g-----~i~~~Ad~VV~AtG~~s~~l~~~~g~~ 264 (448)
T 3axb_A 236 DG-----TRVEVGEKLVVAAGVWSNRLLNPLGID 264 (448)
T ss_dssp TS-----CEEEEEEEEEECCGGGHHHHHGGGTCC
T ss_pred CC-----EEeecCCEEEECCCcCHHHHHHHcCCC
Confidence 34 47 99999999999987 77777654
No 75
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.90 E-value=1.2e-08 Score=116.02 Aligned_cols=150 Identities=17% Similarity=0.264 Sum_probs=90.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC-CCCC---CceeecCHhHHHHHHhh---hcHHHHHH-hcCCCc
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA-FSTH---PQAHFINNRYALVFRKL---DGLAEEIE-RSQPPV 112 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~-~~~~---~ra~~i~~rtmeilr~l---~Gl~d~l~-~~~~~~ 112 (712)
+.++||+|||||++|+++|+.|+++|.+|+|||+... .... +...++ ....+++.+ +|+..... ..+.
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGi--a~~~lv~el~al~g~~~~~~d~~gi-- 94 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGV--AKGQITREIDALGGEMGKAIDATGI-- 94 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECH--HHHHHHHHHHHHTCSHHHHHHHHEE--
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhh--hHHHHHHHHHhcccHHHHHHHhcCC--
Confidence 4469999999999999999999999999999999852 2222 211222 122333333 22221111 1110
Q ss_pred cccceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhc-CceeeccCccccccccccccceE
Q 005134 113 DLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREI 191 (712)
Q Consensus 113 ~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~v 191 (712)
.+.......|.. . ......+++..+...|.+.+++. |+ ++
T Consensus 95 ----~f~~l~~~kgpa---------------v-~~~r~~~Dr~~l~~~L~~~l~~~~GV-------------------~I 135 (641)
T 3cp8_A 95 ----QFRMLNRSKGPA---------------M-HSPRAQADKTQYSLYMRRIVEHEPNI-------------------DL 135 (641)
T ss_dssp ----EEEEECSSSCTT---------------T-CEEEEEECHHHHHHHHHHHHHTCTTE-------------------EE
T ss_pred ----chhhcccccCcc---------------c-cchhhhcCHHHHHHHHHHHHHhCCCC-------------------EE
Confidence 011100000000 0 00113567788889998888875 54 77
Q ss_pred EeCcEEEEEEEcCCeEE-EEEEeccCCceeeEEEEecEEEeccCCCchhhc
Q 005134 192 LMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRK 241 (712)
Q Consensus 192 ~~g~~v~~v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~ 241 (712)
++.+|+.+..+++.|. |.+ .+|. +++||.||.|+|.++..+-
T Consensus 136 -~~~~V~~L~~d~g~V~GV~t---~~G~----~i~Ad~VVLATG~~s~~~i 178 (641)
T 3cp8_A 136 -LQDTVIGVSANSGKFSSVTV---RSGR----AIQAKAAILACGTFLNGLI 178 (641)
T ss_dssp -EECCEEEEEEETTEEEEEEE---TTSC----EEEEEEEEECCTTCBTCEE
T ss_pred -EeeEEEEEEecCCEEEEEEE---CCCc----EEEeCEEEECcCCCCCccc
Confidence 4558999988877765 433 2452 6899999999999876543
No 76
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.89 E-value=3e-09 Score=112.54 Aligned_cols=121 Identities=18% Similarity=0.206 Sum_probs=80.4
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
+.++||+||||||+|+++|+.|+++|++|+|||+.........+. + ... .
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~------------~-------~~~-------~---- 55 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ------------L-------TTT-------T---- 55 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG------------G-------GGC-------S----
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce------------e-------eec-------c----
Confidence 456899999999999999999999999999999821110000000 0 000 0
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
.+... |.....+.+..+...|.+.+.+.++ ++++++ ++++
T Consensus 56 -------~~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~gv-------------------~~~~~~-v~~i 95 (333)
T 1vdc_A 56 -------DVENF-------------PGFPEGILGVELTDKFRKQSERFGT-------------------TIFTET-VTKV 95 (333)
T ss_dssp -------EECCS-------------TTCTTCEEHHHHHHHHHHHHHHTTC-------------------EEECCC-CCEE
T ss_pred -------ccccC-------------CCCccCCCHHHHHHHHHHHHHHCCC-------------------EEEEeE-EEEE
Confidence 00000 0001123456777778888887776 888887 8888
Q ss_pred EEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 201 ~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
+.+++.+++++ ++ .++++|+||.|+|.++..
T Consensus 96 ~~~~~~~~v~~----~~----~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 96 DFSSKPFKLFT----DS----KAILADAVILAIGAVAKR 126 (333)
T ss_dssp ECSSSSEEEEC----SS----EEEEEEEEEECCCEEECC
T ss_pred EEcCCEEEEEE----CC----cEEEcCEEEECCCCCcCC
Confidence 88777766553 33 368999999999998743
No 77
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.89 E-value=1.7e-08 Score=114.53 Aligned_cols=142 Identities=19% Similarity=0.185 Sum_probs=86.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
+.++||+|||||++||++|+.|+++|++|+||||.+... + +.. ....+|+. ...+.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G----G------~w~-~~~~pg~~-----~d~~~-------- 69 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVG----G------VWY-WNRYPGAR-----CDIES-------- 69 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC----T------HHH-HCCCTTCB-----CSSCT--------
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC----C------ccc-ccCCCcee-----ecccc--------
Confidence 456899999999999999999999999999999987642 0 000 00011110 00000
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
.+..... .+..... .+......++..+.+.|.+.+++.+. ...++++++|+++
T Consensus 70 -------~~~~~~f-~~~~~~~--~~~~~~~~~~~~i~~yl~~~~~~~~l-----------------~~~i~~~~~V~~~ 122 (542)
T 1w4x_A 70 -------IEYCYSF-SEEVLQE--WNWTERYASQPEILRYINFVADKFDL-----------------RSGITFHTTVTAA 122 (542)
T ss_dssp -------TTSSCCS-CHHHHHH--CCCCBSSCBHHHHHHHHHHHHHHTTG-----------------GGGEECSCCEEEE
T ss_pred -------ccccccc-Chhhhhc--cCcccccCCHHHHHHHHHHHHHHcCC-----------------CceEEcCcEEEEE
Confidence 0000000 0000000 00011235677888888887777653 1379999999999
Q ss_pred EEcCC--eEEEEEEeccCCceeeEEEEecEEEeccCCCchhh
Q 005134 201 SATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (712)
Q Consensus 201 ~~~~~--~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR 240 (712)
+.+++ .++|++. +|+ +++||+||.|+|..|.-+
T Consensus 123 ~~~~~~~~w~V~~~---~G~----~~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 123 AFDEATNTWTVDTN---HGD----RIRARYLIMASGQLSVPQ 157 (542)
T ss_dssp EEETTTTEEEEEET---TCC----EEEEEEEEECCCSCCCCC
T ss_pred EEcCCCCeEEEEEC---CCC----EEEeCEEEECcCCCCCCC
Confidence 88764 4555442 453 689999999999988543
No 78
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.87 E-value=1.1e-08 Score=122.18 Aligned_cols=70 Identities=14% Similarity=0.202 Sum_probs=53.3
Q ss_pred ccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEE
Q 005134 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (712)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VV 230 (712)
.+....+...|.+.+.+.|+ +|+++++|++++.+++++.. +.. ++| +++||+||
T Consensus 147 ~v~p~~l~~~L~~~a~~~Gv-------------------~i~~~t~V~~i~~~~~~v~~-V~t-~~G-----~i~Ad~VV 200 (830)
T 1pj5_A 147 LASAARAVQLLIKRTESAGV-------------------TYRGSTTVTGIEQSGGRVTG-VQT-ADG-----VIPADIVV 200 (830)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEEETTEEEE-EEE-TTE-----EEECSEEE
T ss_pred eEcHHHHHHHHHHHHHHcCC-------------------EEECCceEEEEEEeCCEEEE-EEE-CCc-----EEECCEEE
Confidence 44666888999999998887 99999999999988777532 221 233 58999999
Q ss_pred eccCCCchh-hcccCCC
Q 005134 231 GTDGAGSTV-RKLVGID 246 (712)
Q Consensus 231 gADG~~S~V-R~~lgi~ 246 (712)
.|+|++|.. .+.+|+.
T Consensus 201 ~AaG~~s~~l~~~~g~~ 217 (830)
T 1pj5_A 201 SCAGFWGAKIGAMIGMA 217 (830)
T ss_dssp ECCGGGHHHHHHTTTCC
T ss_pred ECCccchHHHHHHhCCC
Confidence 999999853 4455654
No 79
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.86 E-value=1.3e-08 Score=113.14 Aligned_cols=157 Identities=15% Similarity=0.189 Sum_probs=89.2
Q ss_pred cCEEEECCCHHHHHHHHHHHh---CCCC---EEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCcc--cc
Q 005134 44 VPVLIVGAGPVGLVLSILLTK---LGIK---CSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVD--LW 115 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar---~Gi~---v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~--~~ 115 (712)
+||+||||||+||++|..|++ .|++ |+||||.+.+. +...... .. |+. ..+.+.. .+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G----G~w~~~~------~~-g~~----~~g~~~~~~~y 67 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG----GQWNYTW------RT-GLD----ENGEPVHSSMY 67 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC----GGGSCCS------CC-SBC----TTSSBCCCCCC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC----CEeecCC------CC-Ccc----ccCCCCcCccc
Confidence 689999999999999999999 9999 99999986541 1000000 00 100 0000100 00
Q ss_pred ceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCc
Q 005134 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH 195 (712)
Q Consensus 116 ~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~ 195 (712)
... ..+ .......+... .+...........+++..+...|.+.+++.++. ..+++++
T Consensus 68 ~~l--~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~-----------------~~i~~~~ 124 (464)
T 2xve_A 68 RYL--WSN-GPKECLEFADY---TFDEHFGKPIASYPPREVLWDYIKGRVEKAGVR-----------------KYIRFNT 124 (464)
T ss_dssp TTC--BCS-SCGGGTCBTTB---CHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCG-----------------GGEECSE
T ss_pred cch--hhc-CChhhcccCCC---CCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCc-----------------ceEEeCC
Confidence 000 000 00000000000 000000000123456788888898888887760 1289999
Q ss_pred EEEEEEEcCC--eEEEEEEeccCCceeeEEEEecEEEeccCCCchhh
Q 005134 196 ECVSVSATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (712)
Q Consensus 196 ~v~~v~~~~~--~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR 240 (712)
+|++++.+++ .++|++....+|+ ..++.+|+||.|+|.+|.-+
T Consensus 125 ~V~~v~~~~~~~~~~V~~~~~~~g~--~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 125 AVRHVEFNEDSQTFTVTVQDHTTDT--IYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTTE--EEEEEESEEEECCCSSSSBC
T ss_pred EEEEEEEcCCCCcEEEEEEEcCCCc--eEEEEcCEEEECCCCCCCCc
Confidence 9999998766 6677766422342 35789999999999876544
No 80
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.85 E-value=3.8e-08 Score=112.55 Aligned_cols=64 Identities=14% Similarity=0.132 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEc-CCeEE-EEEEeccCCceeeEEEEecEEEec
Q 005134 155 YKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT-DQCIN-VIASFLKEGKCTERNIQCNILIGT 232 (712)
Q Consensus 155 ~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~-~~~v~-v~v~~~~~g~~~~~~i~ad~VVgA 232 (712)
..+...|.+.+.+.|+ +|+++++++++..+ ++.|. |.+.+..+|+ ..+++|+.||.|
T Consensus 143 ~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~--~~~i~A~~VVlA 201 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHT-------------------TIFSEWYALDLVKNQDGAVVGCTALCIETGE--VVYFKARATVLA 201 (588)
T ss_dssp HHHHHHHHHHHHHTTC-------------------EEEETEEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCC-------------------EEEeCcEEEEEEECCCCEEEEEEEEEcCCCe--EEEEEcCEEEEC
Confidence 5677888888888776 99999999999886 44443 4444323443 457999999999
Q ss_pred cCCCchh
Q 005134 233 DGAGSTV 239 (712)
Q Consensus 233 DG~~S~V 239 (712)
+|..|.+
T Consensus 202 tGg~~~~ 208 (588)
T 2wdq_A 202 TGGAGRI 208 (588)
T ss_dssp CCCCGGG
T ss_pred CCCCccc
Confidence 9998864
No 81
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.85 E-value=7.4e-08 Score=111.26 Aligned_cols=64 Identities=13% Similarity=0.033 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEE-EEEEeccCCceeeEEEEecEEEecc
Q 005134 155 YKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTD 233 (712)
Q Consensus 155 ~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~VVgAD 233 (712)
..+...|.+.+.+.|+ +|+++++++++..+++.+. +.+....+|+ ...++|+.||.|.
T Consensus 158 ~~l~~~L~~~a~~~gv-------------------~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~--~~~i~A~~VVlAT 216 (660)
T 2bs2_A 158 HTMLFAVANECLKLGV-------------------SIQDRKEAIALIHQDGKCYGAVVRDLVTGD--IIAYVAKGTLIAT 216 (660)
T ss_dssp HHHHHHHHHHHHHHTC-------------------EEECSEEEEEEEEETTEEEEEEEEETTTCC--EEEEECSEEEECC
T ss_pred HHHHHHHHHHHHhCCC-------------------EEEECcEEEEEEecCCEEEEEEEEECCCCc--EEEEEcCEEEEcc
Confidence 3577888888888776 9999999999987766443 3333323453 4579999999999
Q ss_pred CCCchh
Q 005134 234 GAGSTV 239 (712)
Q Consensus 234 G~~S~V 239 (712)
|..+.+
T Consensus 217 GG~~~~ 222 (660)
T 2bs2_A 217 GGYGRI 222 (660)
T ss_dssp CCCGGG
T ss_pred Ccchhh
Confidence 999865
No 82
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.85 E-value=1.5e-08 Score=106.04 Aligned_cols=115 Identities=21% Similarity=0.334 Sum_probs=80.2
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
+||+||||||+|+++|+.|+++|+ +|+|||+.. ..+...+ .. ..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-----~gg~~~~-------------------~~-~~---------- 46 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-----PGGQITG-------------------SS-EI---------- 46 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-----TTCGGGG-------------------CS-CB----------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-----CCccccc-------------------cc-cc----------
Confidence 689999999999999999999999 999999852 1111000 00 00
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
... |.....+++..+...|.+.+.+.++ ++++ +++++++.
T Consensus 47 -------~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~v-------------------~~~~-~~v~~i~~ 86 (311)
T 2q0l_A 47 -------ENY-------------PGVKEVVSGLDFMQPWQEQCFRFGL-------------------KHEM-TAVQRVSK 86 (311)
T ss_dssp -------CCS-------------TTCCSCBCHHHHHHHHHHHHHTTSC-------------------EEEC-SCEEEEEE
T ss_pred -------ccC-------------CCCcccCCHHHHHHHHHHHHHHcCC-------------------EEEE-EEEEEEEE
Confidence 000 0001134567788888888887776 7777 78999988
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhh
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR 240 (712)
+++.+++++. +|. ++++|+||.|+|.++.+.
T Consensus 87 ~~~~~~v~~~---~g~----~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 87 KDSHFVILAE---DGK----TFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp ETTEEEEEET---TSC----EEEEEEEEECCCEEECCC
T ss_pred cCCEEEEEEc---CCC----EEECCEEEECCCCCCCCC
Confidence 8877665542 342 689999999999877544
No 83
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.84 E-value=1.1e-08 Score=107.78 Aligned_cols=120 Identities=20% Similarity=0.276 Sum_probs=83.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEee
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~ 121 (712)
..+||+||||||+||++|+.|+++|++|+|||+.+... |..... .|..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------------------G~~~~~----~~~~-------- 53 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG--------------------GQLSAL----YPEK-------- 53 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--------------------HHHHHH----CTTS--------
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC--------------------ceehhc----CCCc--------
Confidence 45899999999999999999999999999999987531 221100 0100
Q ss_pred ecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEE
Q 005134 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (712)
Q Consensus 122 ~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~ 201 (712)
.+... . . ...++...+...|.+.+.+.++ +++++++|++++
T Consensus 54 ------~~~~~--~---~---------~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~v~~i~ 94 (332)
T 3lzw_A 54 ------YIYDV--A---G---------FPKIRAQELINNLKEQMAKFDQ-------------------TICLEQAVESVE 94 (332)
T ss_dssp ------EECCS--T---T---------CSSEEHHHHHHHHHHHHTTSCC-------------------EEECSCCEEEEE
T ss_pred ------eEecc--C---C---------CCCCCHHHHHHHHHHHHHHhCC-------------------cEEccCEEEEEE
Confidence 00000 0 0 0123456777888888877766 899999999999
Q ss_pred EcCC-eEEEEEEeccCCceeeEEEEecEEEeccCCCchhh
Q 005134 202 ATDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (712)
Q Consensus 202 ~~~~-~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR 240 (712)
.+++ .+.+++. +| ++.+|+||.|.|.+|...
T Consensus 95 ~~~~~~~~v~~~---~g-----~~~~d~vVlAtG~~~~~p 126 (332)
T 3lzw_A 95 KQADGVFKLVTN---EE-----THYSKTVIITAGNGAFKP 126 (332)
T ss_dssp ECTTSCEEEEES---SE-----EEEEEEEEECCTTSCCEE
T ss_pred ECCCCcEEEEEC---CC-----EEEeCEEEECCCCCcCCC
Confidence 8876 5555542 33 389999999999976433
No 84
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.84 E-value=5.6e-08 Score=108.23 Aligned_cols=62 Identities=18% Similarity=0.268 Sum_probs=47.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCCCCCC-------C--------ceeecCHhHHHHHHhhhcHHHHH
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKAFSTH-------P--------QAHFINNRYALVFRKLDGLAEEI 105 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~G--i~v~lvEr~~~~~~~-------~--------ra~~i~~rtmeilr~l~Gl~d~l 105 (712)
++||+|||||++||++|+.|+++| ++|+|+|+++...-+ + ......+..+++++++ |+.+++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~l-g~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAI-GLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHT-TCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHc-CCcceE
Confidence 579999999999999999999999 999999997653211 0 0122356788999998 886554
No 85
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.84 E-value=1.1e-08 Score=115.84 Aligned_cols=141 Identities=18% Similarity=0.231 Sum_probs=87.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHH-hCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeE
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLT-KLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~La-r~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~ 119 (712)
+.++||+|||||++|+++|+.|+ +.|++|+||||++... + +.. ....+|+ ..+....
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~G----G------tw~-~~~ypg~---------~~d~~s~-- 63 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPG----G------TWY-WNRYPGA---------LSDTESH-- 63 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSC----T------HHH-HCCCTTC---------EEEEEGG--
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCC----C------ccc-ccCCCCc---------eecCCcc--
Confidence 45689999999999999999999 9999999999987542 0 000 0001111 0000000
Q ss_pred eeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 120 ~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
...... .. .... ..+......++..+...|.+.+++.++ ...++++++|++
T Consensus 64 ---------~~~~~~-~~-~~~~-~~~~~~~~~~~~ei~~~l~~~~~~~g~-----------------~~~i~~~~~V~~ 114 (540)
T 3gwf_A 64 ---------LYRFSF-DR-DLLQ-ESTWKTTYITQPEILEYLEDVVDRFDL-----------------RRHFKFGTEVTS 114 (540)
T ss_dssp ---------GSSCCS-CH-HHHH-HCCCSBSEEEHHHHHHHHHHHHHHTTC-----------------GGGEEESCCEEE
T ss_pred ---------eeeecc-cc-cccc-CCCCcccCCCHHHHHHHHHHHHHHcCC-----------------cceeEeccEEEE
Confidence 000000 00 0000 001111245678888888888888765 127899999999
Q ss_pred EEEcCC--eEEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 200 VSATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 200 v~~~~~--~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
++.+++ .++|++. +|+ +++||+||.|+|..|.-
T Consensus 115 i~~~~~~~~~~V~~~---~G~----~i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 115 ALYLDDENLWEVTTD---HGE----VYRAKYVVNAVGLLSAI 149 (540)
T ss_dssp EEEETTTTEEEEEET---TSC----EEEEEEEEECCCSCCSB
T ss_pred EEEeCCCCEEEEEEc---CCC----EEEeCEEEECCcccccC
Confidence 998876 5555442 453 68999999999998743
No 86
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.83 E-value=4.9e-07 Score=99.16 Aligned_cols=35 Identities=31% Similarity=0.400 Sum_probs=32.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
+||+|||||++||++|+.|+++|.+|+|||+++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 69999999999999999999999999999997643
No 87
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.82 E-value=1.8e-08 Score=105.68 Aligned_cols=113 Identities=15% Similarity=0.198 Sum_probs=78.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEee
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~ 121 (712)
+++||+||||||+||++|+.|+++|++|+||||. + + |... . .+.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~---g-----------------g~~~---~--~~~--------- 57 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P---G-----------------GQLT---E--AGI--------- 57 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T---T-----------------GGGG---G--CCE---------
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C---C-----------------Ceec---c--ccc---------
Confidence 3589999999999999999999999999999987 1 0 1000 0 000
Q ss_pred ecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEE
Q 005134 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (712)
Q Consensus 122 ~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~ 201 (712)
...+ |. ...+....+...|.+.+.+.++ ++++ +++++++
T Consensus 58 -------~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~~v-------------------~~~~-~~v~~i~ 96 (323)
T 3f8d_A 58 -------VDDY-------------LG-LIEIQASDMIKVFNKHIEKYEV-------------------PVLL-DIVEKIE 96 (323)
T ss_dssp -------ECCS-------------TT-STTEEHHHHHHHHHHHHHTTTC-------------------CEEE-SCEEEEE
T ss_pred -------cccc-------------CC-CCCCCHHHHHHHHHHHHHHcCC-------------------EEEE-EEEEEEE
Confidence 0000 00 0013456677778888888776 7788 8999999
Q ss_pred EcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 202 ~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
.+++.++++.. +|. ++.+|+||.|.|....
T Consensus 97 ~~~~~~~v~~~---~g~----~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 97 NRGDEFVVKTK---RKG----EFKADSVILGIGVKRR 126 (323)
T ss_dssp EC--CEEEEES---SSC----EEEEEEEEECCCCEEC
T ss_pred ecCCEEEEEEC---CCC----EEEcCEEEECcCCCCc
Confidence 88777666553 332 6899999999998843
No 88
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.81 E-value=6.4e-08 Score=110.45 Aligned_cols=67 Identities=10% Similarity=0.069 Sum_probs=50.5
Q ss_pred hhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcC-CeEE-EEEEeccCCceeeEEEEecEEEe
Q 005134 154 QYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATD-QCIN-VIASFLKEGKCTERNIQCNILIG 231 (712)
Q Consensus 154 q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~-~~v~-v~v~~~~~g~~~~~~i~ad~VVg 231 (712)
...+...|.+.+.+.|+ +|+++++++++..++ +.|+ |.+.. .+|+ ..+|+||.||.
T Consensus 254 g~~l~~~L~~~~~~~gv-------------------~i~~~t~v~~l~~~~~g~v~GV~~~~-~~G~--~~~i~A~~VVl 311 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGT-------------------DIRLNSRVVRILEDASGKVTGVLVKG-EYTG--YYVIKADAVVI 311 (572)
T ss_dssp HHHHHHHHHHHHHHTTC-------------------EEESSEEEEEEEEC--CCEEEEEEEE-TTTE--EEEEECSEEEE
T ss_pred HHHHHHHHHHHHHHcCC-------------------eEEecCEEEEEEECCCCeEEEEEEEe-CCCc--EEEEEcCEEEE
Confidence 55788889999988887 999999999998776 5543 44442 2342 45799999999
Q ss_pred ccCCCchhhcc
Q 005134 232 TDGAGSTVRKL 242 (712)
Q Consensus 232 ADG~~S~VR~~ 242 (712)
|+|..|..++.
T Consensus 312 AtGg~~~~~~~ 322 (572)
T 1d4d_A 312 AAGGFAKNNER 322 (572)
T ss_dssp CCCCCTTCHHH
T ss_pred eCCCCccCHHH
Confidence 99999976543
No 89
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.80 E-value=2.3e-07 Score=103.95 Aligned_cols=35 Identities=37% Similarity=0.522 Sum_probs=31.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.+|+|||||++||++|+.|+++|++|+|+|+++.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCC
Confidence 47999999999999999999999999999999765
No 90
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.79 E-value=4.4e-07 Score=102.29 Aligned_cols=37 Identities=30% Similarity=0.475 Sum_probs=34.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.++||+|||||++||++|..|+++|++|+|+|+++.+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3579999999999999999999999999999998754
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.79 E-value=2.7e-08 Score=112.84 Aligned_cols=140 Identities=16% Similarity=0.222 Sum_probs=86.4
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
+.++||+|||||++|+++|+.|++.|++|+||||++... + +.. ....+|+. ...+...+.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G----G------tw~-~~~ypg~~-----~dv~s~~y~---- 78 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVG----G------VWY-WNRYPGAR-----CDVESIDYS---- 78 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC----T------HHH-HCCCTTCB-----CSSCTTTSS----
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCC----C------ccc-cCCCCCce-----eCCCchhcc----
Confidence 456899999999999999999999999999999987542 0 000 00011210 000100000
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
... .. +... .........++..+...|.+.+++.++ ...++++++|+++
T Consensus 79 -----------~~f-~~-~~~~-~~~~~~~~~~~~ei~~yl~~~~~~~g~-----------------~~~i~~~~~V~~i 127 (549)
T 4ap3_A 79 -----------YSF-SP-ELEQ-EWNWSEKYATQPEILAYLEHVADRFDL-----------------RRDIRFDTRVTSA 127 (549)
T ss_dssp -----------CCS-CH-HHHH-HCCCSSSSCBHHHHHHHHHHHHHHTTC-----------------GGGEECSCCEEEE
T ss_pred -----------ccc-cc-cccc-CCCCccCCCCHHHHHHHHHHHHHHcCC-----------------CccEEECCEEEEE
Confidence 000 00 0000 000111245678888888888888775 1278999999999
Q ss_pred EEcCC--eEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 201 SATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 201 ~~~~~--~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
+.+++ .++|++. +|+ +++||+||.|+|..|.
T Consensus 128 ~~~~~~~~w~V~~~---~G~----~i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 128 VLDEEGLRWTVRTD---RGD----EVSARFLVVAAGPLSN 160 (549)
T ss_dssp EEETTTTEEEEEET---TCC----EEEEEEEEECCCSEEE
T ss_pred EEcCCCCEEEEEEC---CCC----EEEeCEEEECcCCCCC
Confidence 88776 4444442 453 6899999999998764
No 92
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.79 E-value=3.8e-08 Score=101.86 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=77.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeeec
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~~ 123 (712)
+||+||||||+||++|+.|+++|++|+|||+.+.... + +.. .
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~-----------------~------------~~~--~------- 44 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNR-----------------F------------ASH--S------- 44 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGG-----------------G------------CSC--C-------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccc-----------------c------------chh--h-------
Confidence 7999999999999999999999999999999651100 0 000 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEc
Q 005134 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (712)
Q Consensus 124 ~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~ 203 (712)
. .+ +. ...++...+...|.+.+.+.+. ++++ ..++++++.+
T Consensus 45 -~-------------~~-----~~-~~~~~~~~~~~~~~~~~~~~~~------------------v~~~-~~~v~~i~~~ 85 (297)
T 3fbs_A 45 -H-------------GF-----LG-QDGKAPGEIIAEARRQIERYPT------------------IHWV-EGRVTDAKGS 85 (297)
T ss_dssp -C-------------SS-----TT-CTTCCHHHHHHHHHHHHTTCTT------------------EEEE-ESCEEEEEEE
T ss_pred -c-------------CC-----cC-CCCCCHHHHHHHHHHHHHhcCC------------------eEEE-EeEEEEEEEc
Confidence 0 00 00 0123445677777777776532 2554 4589999988
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhh
Q 005134 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (712)
Q Consensus 204 ~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR 240 (712)
++++++++. +|+ ++++|+||.|.|.++...
T Consensus 86 ~~~~~v~~~---~g~----~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 86 FGEFIVEID---GGR----RETAGRLILAMGVTDELP 115 (297)
T ss_dssp TTEEEEEET---TSC----EEEEEEEEECCCCEEECC
T ss_pred CCeEEEEEC---CCC----EEEcCEEEECCCCCCCCC
Confidence 888766653 442 689999999999976543
No 93
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.79 E-value=7.6e-08 Score=111.11 Aligned_cols=173 Identities=15% Similarity=0.077 Sum_probs=94.5
Q ss_pred CCCcccCEEEECCCHHHHHHHHHHHhC------CCCEEEEcCCCCCCCCCc--e-eecC----HhHHH------------
Q 005134 39 SNEAVVPVLIVGAGPVGLVLSILLTKL------GIKCSVLEKNKAFSTHPQ--A-HFIN----NRYAL------------ 93 (712)
Q Consensus 39 ~~~~~~~VlIVGaGpaGL~~A~~Lar~------Gi~v~lvEr~~~~~~~~r--a-~~i~----~rtme------------ 93 (712)
+...++||||||||++||++|+.|+++ |.+|+||||......+.. + .+++ ..+.+
T Consensus 18 ~~~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~g 97 (662)
T 3gyx_A 18 IVEHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMG 97 (662)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTT
T ss_pred cceEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcCC
Confidence 345679999999999999999999998 999999999865422211 1 1221 11111
Q ss_pred --------HHHh-hhcHHHHHHhcCCCccccceeEeeecCCCCeee-----eecCCCccccccccCCccccccChhHHHH
Q 005134 94 --------VFRK-LDGLAEEIERSQPPVDLWRKFIYCTSVTGPILG-----SVDHMQPQDFEKVVSPVSVAHFSQYKLNK 159 (712)
Q Consensus 94 --------ilr~-l~Gl~d~l~~~~~~~~~~~~~~~~~~~~G~~l~-----~~~~~~~~~~~~~~~p~~~~~i~q~~Le~ 159 (712)
.+-+ .+...+.+.+.+.+.... ...|.... .+...................+....+.+
T Consensus 98 l~d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~-------~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~ 170 (662)
T 3gyx_A 98 LVREDLIYDLGRHVDDSVHLFEEWGLPVWIK-------DEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKV 170 (662)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTCCBCEE-------CSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHcCCCceec-------CCCCccccchhhhccccccccCccccccceecccCCHHHHHH
Confidence 1110 011122333444332110 01111110 00000000000000000011233456788
Q ss_pred HHHHHHHhc--CceeeccCccccccccccccceEEeCcEEEEEEEcCC---eEE-EEEEeccCCceeeEEEEecEEEecc
Q 005134 160 LLLKQLEKL--NFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQ---CIN-VIASFLKEGKCTERNIQCNILIGTD 233 (712)
Q Consensus 160 ~L~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~---~v~-v~v~~~~~g~~~~~~i~ad~VVgAD 233 (712)
.|.+.+.+. |+ +|+.++.++++..+++ .|. |.+....+|+ ..+|+|+.||.|.
T Consensus 171 ~L~~~a~~~~~gV-------------------~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~--~~~i~Ak~VVLAT 229 (662)
T 3gyx_A 171 IVAEAAKNALGQD-------------------RIIERIFIVKLLLDKNTPNRIAGAVGFNLRANE--VHIFKANAMVVAC 229 (662)
T ss_dssp HHHHHHHHHHCTT-------------------TEECSEEECCCEECSSSTTBEEEEEEEESSSSC--EEEEECSEEEECC
T ss_pred HHHHHHHhcCCCc-------------------EEEEceEEEEEEEeCCccceEEEEEEEEcCCCc--EEEEEeCEEEECC
Confidence 888888876 66 8999999999887766 443 2233323443 4679999999999
Q ss_pred CCCchh
Q 005134 234 GAGSTV 239 (712)
Q Consensus 234 G~~S~V 239 (712)
|..+.+
T Consensus 230 GG~g~~ 235 (662)
T 3gyx_A 230 GGAVNV 235 (662)
T ss_dssp CCBCSS
T ss_pred Cccccc
Confidence 998854
No 94
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.77 E-value=3.9e-08 Score=103.37 Aligned_cols=113 Identities=19% Similarity=0.193 Sum_probs=77.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEee
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~ 121 (712)
.++||+||||||+|+++|+.|+++|++|+||||.. + .+. + .. . ...
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~----gg~------------~-~~------~-~~~--------- 60 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-A----GGL------------T-AE------A-PLV--------- 60 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-T----TGG------------G-GG------C-SCB---------
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-C----Ccc------------c-cc------c-chh---------
Confidence 45899999999999999999999999999999942 1 110 0 00 0 000
Q ss_pred ecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEE
Q 005134 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (712)
Q Consensus 122 ~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~ 201 (712)
... |.. ..+....+...|.+.+.+.++ ++++ .++++++
T Consensus 61 --------~~~-------------~~~-~~~~~~~~~~~~~~~~~~~~v-------------------~~~~-~~v~~i~ 98 (319)
T 3cty_A 61 --------ENY-------------LGF-KSIVGSELAKLFADHAANYAK-------------------IREG-VEVRSIK 98 (319)
T ss_dssp --------CCB-------------TTB-SSBCHHHHHHHHHHHHHTTSE-------------------EEET-CCEEEEE
T ss_pred --------hhc-------------CCC-cccCHHHHHHHHHHHHHHcCC-------------------EEEE-eeEEEEE
Confidence 000 000 123445667777777777776 7777 6899998
Q ss_pred EcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 202 ~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
.+++.+++.. ++. ++.+|+||.|+|.++.
T Consensus 99 ~~~~~~~v~~----~~~----~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 99 KTQGGFDIET----NDD----TYHAKYVIITTGTTHK 127 (319)
T ss_dssp EETTEEEEEE----SSS----EEEEEEEEECCCEEEC
T ss_pred EeCCEEEEEE----CCC----EEEeCEEEECCCCCcc
Confidence 8777765543 232 5899999999998764
No 95
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.77 E-value=8.4e-08 Score=110.01 Aligned_cols=64 Identities=11% Similarity=0.088 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEE-EEEEeccCCceeeEEEEecEEEecc
Q 005134 155 YKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTD 233 (712)
Q Consensus 155 ~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~-v~v~~~~~g~~~~~~i~ad~VVgAD 233 (712)
..+...|.+.+.+.|+ +|+++++++++..+++.|. |.+.+..+|+ ..+++|+.||.|.
T Consensus 155 ~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~--~~~i~A~~VVlAT 213 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDT-------------------SYFVEYFALDLLMENGECRGVIALCIEDGT--IHRFRAKNTVIAT 213 (621)
T ss_dssp HHHHHHHHHHHTTSCC-------------------EEEETEEEEEEEEETTEEEEEEEEETTTCC--EEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhCCC-------------------EEEEceEEEEEEEECCEEEEEEEEEcCCCc--EEEEEcCeEEECC
Confidence 4677888888887776 9999999999988766543 3343323453 4579999999999
Q ss_pred CCCchh
Q 005134 234 GAGSTV 239 (712)
Q Consensus 234 G~~S~V 239 (712)
|..|.+
T Consensus 214 GG~~~~ 219 (621)
T 2h88_A 214 GGYGRT 219 (621)
T ss_dssp CCCGGG
T ss_pred Cccccc
Confidence 999875
No 96
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.76 E-value=4.7e-08 Score=103.03 Aligned_cols=115 Identities=21% Similarity=0.261 Sum_probs=78.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEee
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~ 121 (712)
.++||+||||||+||++|+.|+++|++|+|||+.. + .+... . .. ..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~----gg~~~----------~---------~~-~~--------- 52 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-P----GGQIA----------W---------SE-EV--------- 52 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-T----TGGGG----------G---------CS-CB---------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-C----Ccccc----------c---------cc-cc---------
Confidence 46899999999999999999999999999999972 1 11000 0 00 00
Q ss_pred ecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEE
Q 005134 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (712)
Q Consensus 122 ~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~ 201 (712)
... |.....+++..+...|.+.+.+.|+ ++++ .++++++
T Consensus 53 --------~~~-------------~~~~~~~~~~~~~~~l~~~~~~~gv-------------------~~~~-~~v~~i~ 91 (325)
T 2q7v_A 53 --------ENF-------------PGFPEPIAGMELAQRMHQQAEKFGA-------------------KVEM-DEVQGVQ 91 (325)
T ss_dssp --------CCS-------------TTCSSCBCHHHHHHHHHHHHHHTTC-------------------EEEE-CCEEEEE
T ss_pred --------ccC-------------CCCCCCCCHHHHHHHHHHHHHHcCC-------------------EEEe-eeEEEEE
Confidence 000 0000124556777888888888876 7777 5888888
Q ss_pred Ec--CCe-EEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 202 AT--DQC-INVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 202 ~~--~~~-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
.+ ++. ++++.. +|. ++++|+||.|+|.++.
T Consensus 92 ~~~~~~~~~~v~~~---~g~----~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 92 HDATSHPYPFTVRG---YNG----EYRAKAVILATGADPR 124 (325)
T ss_dssp ECTTSSSCCEEEEE---SSC----EEEEEEEEECCCEEEC
T ss_pred eccCCCceEEEEEC---CCC----EEEeCEEEECcCCCcC
Confidence 76 443 555543 342 6899999999998764
No 97
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.74 E-value=4.4e-08 Score=110.98 Aligned_cols=141 Identities=13% Similarity=0.164 Sum_probs=85.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
+.++||+|||||++|+++|+.|++.|++|+||||++.... +.. ....+|+. ...+...
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GG----------tw~-~~~yPg~~-----~d~~~~~------ 64 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGG----------TWY-WNRYPGCR-----LDTESYA------ 64 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT----------HHH-HCCCTTCB-----CSSCHHH------
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC----------ccc-cCCCCcee-----ecCchhh------
Confidence 4468999999999999999999999999999999875420 000 00011100 0000000
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
..... .+..+. .........++..+...|.+.+++.+. ...++++++|+++
T Consensus 65 ---------y~~~f-~~~~~~--~~~~~~~~~~~~ei~~yl~~~~~~~~l-----------------~~~i~~~~~V~~~ 115 (545)
T 3uox_A 65 ---------YGYFA-LKGIIP--EWEWSENFASQPEMLRYVNRAADAMDV-----------------RKHYRFNTRVTAA 115 (545)
T ss_dssp ---------HCHHH-HTTSST--TCCCSBSSCBHHHHHHHHHHHHHHHTC-----------------GGGEECSCCEEEE
T ss_pred ---------ccccc-Cccccc--CCCccccCCCHHHHHHHHHHHHHHcCC-----------------cCcEEECCEEEEE
Confidence 00000 000000 000011234677888888888887765 1278999999999
Q ss_pred EEcCC--eEEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 201 SATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 201 ~~~~~--~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
+.+++ .++|++. +| .+++||+||.|+|..|.-
T Consensus 116 ~~~~~~~~w~V~~~---~G----~~~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 116 RYVENDRLWEVTLD---NE----EVVTCRFLISATGPLSAS 149 (545)
T ss_dssp EEEGGGTEEEEEET---TT----EEEEEEEEEECCCSCBC-
T ss_pred EEeCCCCEEEEEEC---CC----CEEEeCEEEECcCCCCCC
Confidence 87765 3444432 45 268999999999987643
No 98
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.73 E-value=1.2e-07 Score=105.45 Aligned_cols=31 Identities=29% Similarity=0.572 Sum_probs=30.4
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
||||||||++||++|+.|+++|.+|+||||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 7999999999999999999999999999998
No 99
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.72 E-value=6.4e-08 Score=101.55 Aligned_cols=115 Identities=17% Similarity=0.309 Sum_probs=78.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
|+++||+||||||+|+++|+.|+++|++|+|||+.. +.+. + - .....
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~------------~-~-------~~~~~-------- 49 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-----KGGQ------------L-T-------TTTEV-------- 49 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-----TTGG------------G-G-------GCSBC--------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-----CCce------------E-e-------cchhh--------
Confidence 456899999999999999999999999999999641 1111 0 0 00000
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
... |.....+....+...|.+.+.+.++ ++++++ ++.+
T Consensus 50 ---------~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~-v~~i 87 (320)
T 1trb_A 50 ---------ENW-------------PGDPNDLTGPLLMERMHEHATKFET-------------------EIIFDH-INKV 87 (320)
T ss_dssp ---------CCS-------------TTCCSSCBHHHHHHHHHHHHHHTTC-------------------EEECCC-EEEE
T ss_pred ---------hhC-------------CCCCCCCCHHHHHHHHHHHHHHCCC-------------------EEEEee-eeEE
Confidence 000 0000123445666777777777776 888886 8888
Q ss_pred EEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 201 ~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
+.+++.+++ +. ++. ++.+|+||.|+|.++.
T Consensus 88 ~~~~~~~~v-~~---~~~----~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 88 DLQNRPFRL-NG---DNG----EYTCDALIIATGASAR 117 (320)
T ss_dssp ECSSSSEEE-EE---SSC----EEEEEEEEECCCEEEC
T ss_pred EecCCEEEE-Ee---CCC----EEEcCEEEECCCCCcC
Confidence 887777766 32 342 6899999999998764
No 100
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.72 E-value=5.6e-08 Score=104.19 Aligned_cols=141 Identities=18% Similarity=0.274 Sum_probs=82.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
.++||+||||||+|+++|..|+++|+ +|+|||+.+ +. + .+...+.. ...-.+. +
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~G----g---------~~~~~~~~----~~~~~~~-------~ 57 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VG----H---------SFKHWPKS----TRTITPS-------F 57 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TT----H---------HHHTSCTT----CBCSSCC-------C
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CC----C---------ccccCccc----ccccCcc-------h
Confidence 35899999999999999999999999 999999986 21 1 00000000 0000000 0
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
.....|-. .+.......... . ......+.+..+...|.+.+++.|+ +++++++|+++
T Consensus 58 ~~~~~g~~--~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~~~~gv-------------------~i~~~~~v~~i 114 (369)
T 3d1c_A 58 TSNGFGMP--DMNAISMDTSPA-F-TFNEEHISGETYAEYLQVVANHYEL-------------------NIFENTVVTNI 114 (369)
T ss_dssp CCGGGTCC--CTTCSSTTCCHH-H-HHCCSSCBHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEE
T ss_pred hcccCCch--hhhhcccccccc-c-cccccCCCHHHHHHHHHHHHHHcCC-------------------eEEeCCEEEEE
Confidence 00000000 000000000000 0 0001134556677778777777776 89999999999
Q ss_pred EEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 201 ~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
+.++++++++.. ++ ++.+|+||.|.|.++.
T Consensus 115 ~~~~~~~~v~~~---~g-----~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 115 SADDAYYTIATT---TE-----TYHADYIFVATGDYNF 144 (369)
T ss_dssp EECSSSEEEEES---SC-----CEEEEEEEECCCSTTS
T ss_pred EECCCeEEEEeC---CC-----EEEeCEEEECCCCCCc
Confidence 988777666542 33 4789999999998863
No 101
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.72 E-value=6e-07 Score=100.26 Aligned_cols=38 Identities=34% Similarity=0.541 Sum_probs=34.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..++||+|||||++||++|+.|+++|++|+|+|+++.+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 45689999999999999999999999999999998754
No 102
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.71 E-value=1.4e-08 Score=107.57 Aligned_cols=115 Identities=18% Similarity=0.249 Sum_probs=76.4
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
+..+||+||||||+|+++|+.|+++|++|+|||+.. +.+. + . .....
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~------------~-------~-~~~~~-------- 58 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-----FGGA------------L-------M-TTTDV-------- 58 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-----CSCG------------G-------G-SCSCB--------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-----CCCc------------e-------e-ccchh--------
Confidence 345899999999999999999999999999999651 1110 0 0 00000
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
... |.....+....+...|.+.+.+.++ ++++++ ++++
T Consensus 59 ---------~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~v-------------------~~~~~~-v~~i 96 (335)
T 2a87_A 59 ---------ENY-------------PGFRNGITGPELMDEMREQALRFGA-------------------DLRMED-VESV 96 (335)
T ss_dssp ---------CCS-------------TTCTTCBCHHHHHHHHHHHHHHTTC-------------------EEECCC-EEEE
T ss_pred ---------hhc-------------CCCCCCCCHHHHHHHHHHHHHHcCC-------------------EEEEee-EEEE
Confidence 000 0000123456677777777777776 888887 8888
Q ss_pred EEcCCeEEE-EEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 201 SATDQCINV-IASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 201 ~~~~~~v~v-~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
+. ++.+++ .+ .+|. ++.+|+||.|+|.++.
T Consensus 97 ~~-~~~~~v~~~---~~g~----~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 97 SL-HGPLKSVVT---ADGQ----THRARAVILAMGAAAR 127 (335)
T ss_dssp EC-SSSSEEEEE---TTSC----EEEEEEEEECCCEEEC
T ss_pred Ee-CCcEEEEEe---CCCC----EEEeCEEEECCCCCcc
Confidence 77 455555 33 2342 6899999999998764
No 103
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.68 E-value=7.6e-08 Score=106.98 Aligned_cols=144 Identities=16% Similarity=0.189 Sum_probs=82.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCH---hHHHHHHhhhcHHHHHHhcCCCccccceeE
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINN---RYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~---rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~ 119 (712)
++||+||||||+|+++|+.|+++|++|+||||.. . .+..++. .+..++... ++.+.+........ +.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~----gG~~~~~g~~psk~ll~~~-~~~~~~~~~~~~~g----~~ 72 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-W----GGVCLNVGCIPSKALLRNA-ELVHIFTKDAKAFG----IS 72 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-T----THHHHHHSHHHHHHHHHHH-HHHHHHHHHTTTTT----EE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-C----CCcccccCchhhHHHHHHH-HHHHHHHHHHHhcC----CC
Confidence 5899999999999999999999999999999972 1 1221211 234445544 55555541111110 00
Q ss_pred eeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 120 ~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
.+.. . ++.... .... . -...+...|.+.+.+.++ ++++++.+.
T Consensus 73 -----~~~~---~------~~~~~~-~~~~-~-~~~~l~~~l~~~~~~~gv-------------------~~~~g~~~~- 115 (464)
T 2a8x_A 73 -----GEVT---F------DYGIAY-DRSR-K-VAEGRVAGVHFLMKKNKI-------------------TEIHGYGTF- 115 (464)
T ss_dssp -----ECCE---E------CHHHHH-HHHH-H-HHHHHHHHHHHHHHHTTC-------------------EEECEEEEE-
T ss_pred -----CCCc---c------CHHHHH-HHHH-H-HHHHHHHHHHHHHHhCCC-------------------EEEEeEEEE-
Confidence 0000 0 000000 0000 0 013345556666666665 888887654
Q ss_pred EEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchhh
Q 005134 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (712)
Q Consensus 200 v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR 240 (712)
.+.+.+++... +|+ ..++++|+||.|+|.++.+.
T Consensus 116 --id~~~v~V~~~---~G~--~~~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 116 --ADANTLLVDLN---DGG--TESVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp --SSSSEEEEEET---TSC--CEEEEEEEEEECCCEEECCC
T ss_pred --ecCCeEEEEeC---CCc--eEEEEcCEEEECCCCCCCCC
Confidence 35556555432 342 24789999999999988544
No 104
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.68 E-value=5.1e-08 Score=114.44 Aligned_cols=37 Identities=41% Similarity=0.658 Sum_probs=34.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..+||+|||||++||++|..|++.|++|+|+|+.+.+
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRI 371 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccce
Confidence 4589999999999999999999999999999997654
No 105
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.68 E-value=4e-08 Score=105.40 Aligned_cols=37 Identities=22% Similarity=0.528 Sum_probs=33.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..++||+|||||++|+++|+.|+++|++|+||||...
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 3468999999999999999999999999999999753
No 106
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.67 E-value=6.1e-08 Score=101.29 Aligned_cols=113 Identities=17% Similarity=0.310 Sum_probs=76.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
++||+||||||+||++|+.|+++|++|+|||+... +... ... ++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~g------G~~~--------~~~-~~--------------------- 44 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFG------GQIL--------DTV-DI--------------------- 44 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTT------GGGG--------GCC-EE---------------------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC------ceec--------ccc-cc---------------------
Confidence 37999999999999999999999999999986421 1000 000 00
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+ . . .....+..+...|.+.+.+.++ +++++++++.++.
T Consensus 45 -------~~~--~--------~----~~~~~~~~~~~~~~~~~~~~~v-------------------~~~~~~~v~~i~~ 84 (310)
T 1fl2_A 45 -------ENY--I--------S----VPKTEGQKLAGALKVHVDEYDV-------------------DVIDSQSASKLIP 84 (310)
T ss_dssp -------CCB--T--------T----BSSEEHHHHHHHHHHHHHTSCE-------------------EEECSCCEEEEEC
T ss_pred -------ccc--c--------C----cCCCCHHHHHHHHHHHHHHcCC-------------------eEEccCEEEEEEe
Confidence 000 0 0 0012345666777777777776 8999999999976
Q ss_pred cCC---eEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 203 TDQ---CINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 203 ~~~---~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
+.+ .+++++. +|+ ++++|+||.|+|.++.
T Consensus 85 ~~~~~~~~~v~~~---~g~----~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 85 AAVEGGLHQIETA---SGA----VLKARSIIVATGAKWR 116 (310)
T ss_dssp CSSTTCCEEEEET---TSC----EEEEEEEEECCCEEEC
T ss_pred cccCCceEEEEEC---CCC----EEEeCEEEECcCCCcC
Confidence 532 4555442 442 6899999999998764
No 107
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.65 E-value=9.3e-08 Score=99.88 Aligned_cols=37 Identities=24% Similarity=0.495 Sum_probs=32.5
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 40 ~~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.|+++||+||||||+||++|+.|+|+|.+|+|||+..
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3678999999999999999999999999999999863
No 108
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.62 E-value=1.2e-07 Score=105.84 Aligned_cols=37 Identities=27% Similarity=0.528 Sum_probs=33.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.++||+||||||+|+++|+.|++.|++|+||||.+..
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4689999999999999999999999999999997643
No 109
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.61 E-value=4.3e-07 Score=105.00 Aligned_cols=38 Identities=26% Similarity=0.309 Sum_probs=34.4
Q ss_pred CcccCEEEECCCHHHHHHHHHHH---h-CCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLT---K-LGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~La---r-~Gi~v~lvEr~~~~ 78 (712)
..++||||||||++||++|+.|+ + +|.+|+||||....
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 45689999999999999999999 6 89999999998743
No 110
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.56 E-value=6.5e-07 Score=100.39 Aligned_cols=65 Identities=11% Similarity=0.094 Sum_probs=51.2
Q ss_pred cccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCC--------eEEEEEEeccCCceee
Q 005134 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQ--------CINVIASFLKEGKCTE 221 (712)
Q Consensus 150 ~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~--------~v~v~v~~~~~g~~~~ 221 (712)
...+|.++...|...+++++. .|+|+++|++++..++ ..+|++.+..+|+ .
T Consensus 140 ~~p~r~E~~~Yl~~~A~~~~~-------------------~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~--~ 198 (501)
T 4b63_A 140 FLPARLEFEDYMRWCAQQFSD-------------------VVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGE--I 198 (501)
T ss_dssp SCCBHHHHHHHHHHHHHTTGG-------------------GEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCC--E
T ss_pred CCCCHHHHHHHHHHHHHHcCC-------------------ceEcceEEEeeccccccccccccceEEEEEecCCCce--E
Confidence 346788999999999887654 7999999999987542 4677777554453 5
Q ss_pred EEEEecEEEeccCC
Q 005134 222 RNIQCNILIGTDGA 235 (712)
Q Consensus 222 ~~i~ad~VVgADG~ 235 (712)
.+++|+.||.|-|.
T Consensus 199 ~~~~ar~vVlatG~ 212 (501)
T 4b63_A 199 SARRTRKVVIAIGG 212 (501)
T ss_dssp EEEEEEEEEECCCC
T ss_pred EEEEeCEEEECcCC
Confidence 68999999999994
No 111
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.56 E-value=5.1e-07 Score=100.86 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=32.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
+.++||+||||||+||++|+.|+++|++|+||||.
T Consensus 24 ~~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 24 SFDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 34689999999999999999999999999999994
No 112
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.55 E-value=2.1e-07 Score=103.83 Aligned_cols=37 Identities=32% Similarity=0.583 Sum_probs=33.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.++||+||||||+|+++|+.|+++|++|+||||.+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 4589999999999999999999999999999997543
No 113
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.52 E-value=2.7e-07 Score=104.00 Aligned_cols=115 Identities=16% Similarity=0.302 Sum_probs=78.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
+..+||+||||||+|+++|+.|+++|++|+|||++.. +... ... ++ +
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~G------G~~~--------~~~-~~---------~--------- 256 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFG------GQVL--------DTV-DI---------E--------- 256 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTT------GGGT--------TCS-CB---------C---------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCC------Cccc--------ccc-cc---------c---------
Confidence 3468999999999999999999999999999986421 1000 000 00 0
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
.+. . ........+...|.+.+.+.|+ +++++++++++
T Consensus 257 ------------------~~~--~----~~~~~~~~l~~~l~~~~~~~gv-------------------~v~~~~~v~~i 293 (521)
T 1hyu_A 257 ------------------NYI--S----VPKTEGQKLAGALKAHVSDYDV-------------------DVIDSQSASKL 293 (521)
T ss_dssp ------------------CBT--T----BSSBCHHHHHHHHHHHHHTSCE-------------------EEECSCCEEEE
T ss_pred ------------------ccC--C----CCCCCHHHHHHHHHHHHHHcCC-------------------EEEcCCEEEEE
Confidence 000 0 0012455677778888888776 89999999999
Q ss_pred EEcC---CeEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 201 SATD---QCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 201 ~~~~---~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
..+. +.+++++. +|. ++++|+||.|+|+++.
T Consensus 294 ~~~~~~~~~~~V~~~---~g~----~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 294 VPAATEGGLHQIETA---SGA----VLKARSIIIATGAKWR 327 (521)
T ss_dssp ECCSSTTSCEEEEET---TSC----EEEEEEEEECCCEEEC
T ss_pred EeccCCCceEEEEEC---CCC----EEEcCEEEECCCCCcC
Confidence 7542 25555542 453 6899999999998753
No 114
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.51 E-value=1.6e-06 Score=97.06 Aligned_cols=37 Identities=32% Similarity=0.611 Sum_probs=32.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
|+++||+||||||+|+++|+.|+++|.+|+||||.+.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 59 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRST 59 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 4569999999999999999999999999999998754
No 115
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.50 E-value=2.6e-07 Score=102.83 Aligned_cols=63 Identities=21% Similarity=0.234 Sum_probs=47.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCce------------ee---cCHhHHHHHHhhhcHHHHH
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQA------------HF---INNRYALVFRKLDGLAEEI 105 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra------------~~---i~~rtmeilr~l~Gl~d~l 105 (712)
..+||+|||||++||++|..|+++|++|+|+|+++.+.-+.+. .. -.+..+++++++ |+.+.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~-gl~~~~ 92 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAAL-NLEGRI 92 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHT-TCGGGE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHc-CCccee
Confidence 3579999999999999999999999999999999865221111 11 146788999998 876544
No 116
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.47 E-value=2.3e-07 Score=103.17 Aligned_cols=37 Identities=38% Similarity=0.603 Sum_probs=34.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.++||+||||||+|+++|+.|+++|++|+||||.+.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 4589999999999999999999999999999998654
No 117
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.43 E-value=3.3e-07 Score=101.92 Aligned_cols=35 Identities=26% Similarity=0.427 Sum_probs=32.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~~~ 78 (712)
.||+|||||++||++|+.|+++|. +|+|+|+++.+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 689999999999999999999999 99999998654
No 118
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.37 E-value=1.4e-06 Score=90.67 Aligned_cols=113 Identities=19% Similarity=0.253 Sum_probs=75.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEE-EcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEe
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSV-LEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~l-vEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~ 120 (712)
..+||+||||||+||++|+.|+++|++|+| +||. .+ . |.. .... ..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~----g----------------G~~---~~~~-~~-------- 49 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MP----G----------------GQI---TSSS-EI-------- 49 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-ST----T----------------GGG---GGCS-CB--------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CC----C----------------cee---eeec-ee--------
Confidence 348999999999999999999999999999 9993 22 1 110 0000 00
Q ss_pred eecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEE
Q 005134 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (712)
Q Consensus 121 ~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v 200 (712)
. ..|.....++...+...|.+.+.+.++ +++++ +++++
T Consensus 50 ---------~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~v-------------------~~~~~-~v~~i 87 (315)
T 3r9u_A 50 ---------E-------------NYPGVAQVMDGISFMAPWSEQCMRFGL-------------------KHEMV-GVEQI 87 (315)
T ss_dssp ---------C-------------CSTTCCSCBCHHHHHHHHHHHHTTTCC-------------------EEECC-CEEEE
T ss_pred ---------c-------------cCCCCCCCCCHHHHHHHHHHHHHHcCc-------------------EEEEE-EEEEE
Confidence 0 000001134456777778888887776 78888 88888
Q ss_pred EEcC--CeEEEEEEeccCCceeeEEEEecEEEeccCCCc
Q 005134 201 SATD--QCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (712)
Q Consensus 201 ~~~~--~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (712)
.++ +.+++.+. ++ . ++.+|+||.|.|...
T Consensus 88 -~~~~~~~~~v~~~---~~---~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 88 -LKNSDGSFTIKLE---GG---K-TELAKAVIVCTGSAP 118 (315)
T ss_dssp -EECTTSCEEEEET---TS---C-EEEEEEEEECCCEEE
T ss_pred -ecCCCCcEEEEEe---cC---C-EEEeCEEEEeeCCCC
Confidence 666 66654343 22 1 689999999999743
No 119
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.35 E-value=4.5e-08 Score=104.43 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=31.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC------CCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLG------IKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~G------i~v~lvEr~~ 76 (712)
+||+|||||++||++|+.|+++| .+|+||||..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999999998 9999999986
No 120
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.35 E-value=4.7e-07 Score=94.59 Aligned_cols=34 Identities=26% Similarity=0.419 Sum_probs=32.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.+||+||||||+||++|+.|+++|++|+|||+..
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 3899999999999999999999999999999875
No 121
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.32 E-value=1.1e-05 Score=89.63 Aligned_cols=36 Identities=31% Similarity=0.470 Sum_probs=33.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+.++||+||||||+|+++|+.|+++|.+|+||||..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 456999999999999999999999999999999764
No 122
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.28 E-value=2.3e-06 Score=98.00 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=34.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~ 78 (712)
+...+|+||||||+||++|..|+++ |.+|+||||.+..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 3457999999999999999999999 8999999999865
No 123
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.28 E-value=1e-05 Score=89.97 Aligned_cols=36 Identities=39% Similarity=0.672 Sum_probs=33.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.++||+||||||+|+++|+.|+++|.+|+||||.+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 359999999999999999999999999999999863
No 124
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.22 E-value=2.8e-06 Score=94.93 Aligned_cols=37 Identities=16% Similarity=0.138 Sum_probs=33.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCC---CCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLG---IKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~G---i~v~lvEr~~~~ 78 (712)
+++||+||||||+|+++|..|+++| .+|+|||+.+..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 3589999999999999999999998 999999998754
No 125
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.22 E-value=2.7e-06 Score=94.69 Aligned_cols=38 Identities=34% Similarity=0.573 Sum_probs=34.4
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
+.++||+||||||+|+++|..|+++|++|+|||+.+.+
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 34689999999999999999999999999999998643
No 126
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.21 E-value=6.3e-06 Score=91.16 Aligned_cols=34 Identities=41% Similarity=0.641 Sum_probs=32.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
.++||+||||||+|+++|+.|++.|.+|+|||+.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3589999999999999999999999999999997
No 127
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.21 E-value=3e-06 Score=94.20 Aligned_cols=36 Identities=14% Similarity=0.330 Sum_probs=31.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~ 78 (712)
+.+|+||||||+||++|..|+++ |.+|+||||.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 46999999999999999999999 9999999999765
No 128
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.20 E-value=1.9e-06 Score=93.86 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=31.4
Q ss_pred cCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar---~Gi~v~lvEr~~ 76 (712)
.+|+|||||++||++|..|++ .|++|+|||+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 479999999999999999999 899999999987
No 129
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.19 E-value=6e-06 Score=91.28 Aligned_cols=36 Identities=22% Similarity=0.383 Sum_probs=33.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFS 79 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~~ 79 (712)
+||+||||||+||++|..|+++ |.+|+|||+.+...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 6999999999999999999999 99999999998654
No 130
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.19 E-value=3.3e-06 Score=92.73 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=32.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~~ 77 (712)
++||+||||||+|+++|..|+++|. +|+|||+.+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 4899999999999999999999998 7999998764
No 131
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.17 E-value=1e-06 Score=92.20 Aligned_cols=37 Identities=24% Similarity=0.549 Sum_probs=33.2
Q ss_pred CCCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 39 ~~~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
|+..+|||+||||||+||++|+.|+++|++|+||||.
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~ 38 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG 38 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 4456799999999999999999999999999999985
No 132
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.16 E-value=5.9e-06 Score=91.28 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=32.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~ 78 (712)
+||+||||||+|+++|..|+++ |.+|+|||+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 4899999999999999999999 9999999998754
No 133
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.14 E-value=1.3e-05 Score=90.31 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=33.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+.++||+||||||+|+++|+.|+++|.+|+||||.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 356999999999999999999999999999999975
No 134
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.14 E-value=7e-06 Score=91.46 Aligned_cols=35 Identities=17% Similarity=0.419 Sum_probs=32.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~ 78 (712)
+||+||||||+|+++|..|++. |.+|+|||+.+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 6999999999999999999997 9999999998754
No 135
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.13 E-value=1.8e-06 Score=91.08 Aligned_cols=37 Identities=38% Similarity=0.552 Sum_probs=33.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHh--CCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTK--LGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar--~Gi~v~lvEr~~~~ 78 (712)
.++||+||||||+||++|+.|++ .|++|+||||.+.+
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 35799999999999999999975 59999999998764
No 136
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.13 E-value=6.8e-06 Score=89.40 Aligned_cols=35 Identities=26% Similarity=0.483 Sum_probs=32.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~~~ 78 (712)
.+|+|||||++||++|..|+++|. +|+|||+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCC
Confidence 589999999999999999999999 89999998743
No 137
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.12 E-value=3.6e-06 Score=93.46 Aligned_cols=36 Identities=39% Similarity=0.636 Sum_probs=33.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
++||+||||||+|+++|+.|++.|++|+|||+.+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 489999999999999999999999999999998643
No 138
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.12 E-value=3.4e-05 Score=85.96 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=32.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
+.++||+||||||+|+++|+.|+++|.+|+||||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 34699999999999999999999999999999963
No 139
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.11 E-value=1.5e-05 Score=87.95 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=32.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~ 78 (712)
+||+||||||+|+++|..|+++ |.+|+|||+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 4799999999999999999998 9999999998754
No 140
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.11 E-value=2.1e-05 Score=87.25 Aligned_cols=104 Identities=18% Similarity=0.274 Sum_probs=77.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeeec
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~~ 123 (712)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------~------------------------- 208 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ----------------G------------------------- 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------S-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc----------------c-------------------------
Confidence 58999999999999999999999999999997653210 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEc
Q 005134 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (712)
Q Consensus 124 ~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~ 203 (712)
...+...|.+.+++.|+ ++++++++++++.+
T Consensus 209 ------------------------------~~~~~~~l~~~l~~~gV-------------------~i~~~~~v~~i~~~ 239 (464)
T 2eq6_A 209 ------------------------------DPETAALLRRALEKEGI-------------------RVRTKTKAVGYEKK 239 (464)
T ss_dssp ------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEEE
T ss_pred ------------------------------CHHHHHHHHHHHHhcCC-------------------EEEcCCEEEEEEEe
Confidence 01223445566667776 99999999999988
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 204 ~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
++++.+++....+|+ +.++.+|+||.|.|.++..
T Consensus 240 ~~~~~v~~~~~~~g~--~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 240 KDGLHVRLEPAEGGE--GEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp TTEEEEEEEETTCCS--CEEEEESEEEECSCEEESC
T ss_pred CCEEEEEEeecCCCc--eeEEEcCEEEECCCcccCC
Confidence 877766664211142 3478999999999977643
No 141
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.10 E-value=8.2e-06 Score=88.21 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=34.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..+++|+|||||++|+++|..|.+.+.+++|||+.+..
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 45689999999999999999998889999999998864
No 142
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.10 E-value=3.5e-05 Score=88.46 Aligned_cols=38 Identities=29% Similarity=0.430 Sum_probs=34.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~ 79 (712)
.++||+|||||++|+++|+.|+++|++|+||||.+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 46899999999999999999999999999999987654
No 143
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.09 E-value=6.4e-06 Score=90.95 Aligned_cols=36 Identities=22% Similarity=0.405 Sum_probs=33.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~ 78 (712)
.++|+||||||+||++|..|+++ |.+|+|||+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47999999999999999999998 8899999998754
No 144
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.09 E-value=3.3e-05 Score=86.96 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=34.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
+.++||+|||||++|+++|+.|++.|.+|+|||+.+.
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF 77 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3458999999999999999999999999999999874
No 145
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.08 E-value=8.5e-06 Score=92.65 Aligned_cols=35 Identities=17% Similarity=0.241 Sum_probs=32.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~ 78 (712)
.+|+||||||+||++|..|+++ |.+|+|||+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 4799999999999999999998 8999999999765
No 146
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.08 E-value=8.1e-06 Score=90.57 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=33.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.++||+||||||+|+++|+.|+++|++|+||||++.
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~ 38 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGE 38 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 368999999999999999999999999999998764
No 147
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.07 E-value=2.1e-05 Score=86.84 Aligned_cols=100 Identities=18% Similarity=0.301 Sum_probs=75.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.+. +
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~----------------~------------------------ 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT----------------M------------------------ 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT----------------S------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc----------------c------------------------
Confidence 357999999999999999999999999999998653110 0
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
...+.+.|.+.+++.|+ ++++++++++++.
T Consensus 207 -------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~V~~i~~ 236 (455)
T 2yqu_A 207 -------------------------------DLEVSRAAERVFKKQGL-------------------TIRTGVRVTAVVP 236 (455)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEECCEEEEEEE
Confidence 01122334555566676 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
+++++.+++. +|+ ++.+|+||.|.|.++..
T Consensus 237 ~~~~v~v~~~---~g~----~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 237 EAKGARVELE---GGE----VLEADRVLVAVGRRPYT 266 (455)
T ss_dssp ETTEEEEEET---TSC----EEEESEEEECSCEEECC
T ss_pred eCCEEEEEEC---CCe----EEEcCEEEECcCCCcCC
Confidence 8877665542 342 68999999999988754
No 148
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.07 E-value=1.9e-06 Score=96.60 Aligned_cols=38 Identities=32% Similarity=0.556 Sum_probs=34.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~-Gi~v~lvEr~~~~ 78 (712)
.+++||+|||||++||++|..|+++ |++|+|+|+++.+
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETP 46 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSC
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCC
Confidence 4569999999999999999999985 9999999999764
No 149
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.06 E-value=1.7e-05 Score=85.50 Aligned_cols=101 Identities=21% Similarity=0.297 Sum_probs=76.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+.+|..|++.|.+|+|+|+.+.+... .
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------~------------------------ 184 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------------L------------------------ 184 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------------T------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc----------------c------------------------
Confidence 367999999999999999999999999999987643210 0
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
....+.+.|.+.+++.|+ ++++++++++++.
T Consensus 185 ------------------------------~~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 215 (384)
T 2v3a_A 185 ------------------------------LHPAAAKAVQAGLEGLGV-------------------RFHLGPVLASLKK 215 (384)
T ss_dssp ------------------------------SCHHHHHHHHHHHHTTTC-------------------EEEESCCEEEEEE
T ss_pred ------------------------------cCHHHHHHHHHHHHHcCC-------------------EEEeCCEEEEEEe
Confidence 001233455666667776 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
+++++.+++. +|+ ++.+|+||.|.|.++..
T Consensus 216 ~~~~~~v~~~---~g~----~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 216 AGEGLEAHLS---DGE----VIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp ETTEEEEEET---TSC----EEEESEEEECSCEEECC
T ss_pred cCCEEEEEEC---CCC----EEECCEEEECcCCCcCH
Confidence 8777666543 453 68999999999987743
No 150
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.04 E-value=1.1e-05 Score=88.12 Aligned_cols=37 Identities=30% Similarity=0.417 Sum_probs=33.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCC--EEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIK--CSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~--v~lvEr~~~~ 78 (712)
.+++|+|||||++|+++|..|+++|.+ |+|||+.+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEI 46 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCC
Confidence 458999999999999999999999987 9999998753
No 151
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.04 E-value=4.4e-05 Score=84.64 Aligned_cols=35 Identities=17% Similarity=0.434 Sum_probs=32.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.++||+||||||+|+++|+.|+++|.+|+|||+..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 45899999999999999999999999999999983
No 152
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.03 E-value=9.3e-06 Score=89.79 Aligned_cols=34 Identities=47% Similarity=0.764 Sum_probs=32.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
+||+||||||+|+++|+.|+++|++|+|||+.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA 35 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 7999999999999999999999999999999864
No 153
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.00 E-value=6.8e-06 Score=90.64 Aligned_cols=39 Identities=36% Similarity=0.516 Sum_probs=35.6
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 40 ~~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
++.++||+|||||++||++|+.|+++|++|+|+|++..+
T Consensus 2 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 2 PTLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp CEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 355789999999999999999999999999999998755
No 154
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.97 E-value=2.6e-05 Score=86.44 Aligned_cols=35 Identities=26% Similarity=0.525 Sum_probs=33.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.++||+||||||+|+++|..|+++|.+|+|||+.+
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 36899999999999999999999999999999976
No 155
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.96 E-value=8.7e-05 Score=82.44 Aligned_cols=105 Identities=19% Similarity=0.358 Sum_probs=77.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~---------------------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-----MD---------------------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-----SC----------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-----cC----------------------------------
Confidence 358999999999999999999999999999998743210 00
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+...|.+.+++.|+ ++++++++++++.
T Consensus 224 --------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 252 (478)
T 1v59_A 224 --------------------------------GEVAKATQKFLKKQGL-------------------DFKLSTKVISAKR 252 (478)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 1223345555666776 9999999999987
Q ss_pred --cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 203 --TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 203 --~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
+++.+.+++....+|+ ..++.+|.||.|.|.....
T Consensus 253 ~~~~~~~~v~~~~~~~g~--~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 253 NDDKNVVEIVVEDTKTNK--QENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp ETTTTEEEEEEEETTTTE--EEEEEESEEEECSCEEECC
T ss_pred ecCCCeEEEEEEEcCCCC--ceEEECCEEEECCCCCcCC
Confidence 5666666665322332 2478999999999987654
No 156
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.96 E-value=3.2e-05 Score=86.03 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=32.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.++||+||||||+|+++|+.|++.|.+|+||||..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46899999999999999999999999999999974
No 157
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.95 E-value=1.1e-05 Score=87.98 Aligned_cols=37 Identities=22% Similarity=0.338 Sum_probs=33.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~~~ 78 (712)
.++||+||||||+|+++|..|+++|. +|+|||+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 45899999999999999999999998 49999998643
No 158
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.95 E-value=4.7e-05 Score=84.91 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=33.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..++||+||||||+|+++|+.|+++|.+|+||||.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 356999999999999999999999999999999854
No 159
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.90 E-value=2.9e-05 Score=86.94 Aligned_cols=34 Identities=21% Similarity=0.488 Sum_probs=32.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC---CCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKL---GIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~---Gi~v~lvEr~~ 76 (712)
++||+||||||+|+++|..|+++ |++|+||||.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999986
No 160
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.89 E-value=9.3e-06 Score=89.30 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=32.0
Q ss_pred cCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar---~Gi~v~lvEr~~~ 77 (712)
.+|+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 589999999999999999999 8999999999874
No 161
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.89 E-value=1.1e-05 Score=86.40 Aligned_cols=37 Identities=43% Similarity=0.584 Sum_probs=33.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC-CC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN-KA 77 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~-~~ 77 (712)
...++|+|||||++||++|+.|+++|++|+|+|++ ..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANR 79 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccc
Confidence 34689999999999999999999999999999998 53
No 162
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.89 E-value=1.2e-05 Score=89.86 Aligned_cols=62 Identities=24% Similarity=0.375 Sum_probs=48.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC------------ceeec---CHhHHHHHHhhhcHHHH
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP------------QAHFI---NNRYALVFRKLDGLAEE 104 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~------------ra~~i---~~rtmeilr~l~Gl~d~ 104 (712)
..+||+|||||++||++|+.|+++|++|+|+|+++.+.-.- .++.+ .+..+++++++ |+.+.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~l-gl~~~ 88 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSL-GLREK 88 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHT-TCGGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHc-CCccc
Confidence 35899999999999999999999999999999998652211 11222 46788999998 88654
No 163
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.87 E-value=0.0001 Score=81.32 Aligned_cols=103 Identities=17% Similarity=0.342 Sum_probs=77.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------~------------------------ 209 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG----------------F------------------------ 209 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------------S------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc----------------c------------------------
Confidence 368999999999999999999999999999988653100 0
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
...+.+.|.+.+++.|+ ++++++++++++.
T Consensus 210 -------------------------------~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 239 (455)
T 1ebd_A 210 -------------------------------EKQMAAIIKKRLKKKGV-------------------EVVTNALAKGAEE 239 (455)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEEESEEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 01123345555666776 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
+++++.+++.. +|+ ..++.+|.||.|.|.+...
T Consensus 240 ~~~~~~v~~~~--~g~--~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 240 REDGVTVTYEA--NGE--TKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp ETTEEEEEEEE--TTE--EEEEEESEEEECSCEEESC
T ss_pred eCCeEEEEEEe--CCc--eeEEEcCEEEECcCCCccc
Confidence 87777666642 332 2478999999999987643
No 164
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.86 E-value=2.9e-05 Score=83.28 Aligned_cols=35 Identities=31% Similarity=0.440 Sum_probs=32.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
-.||+||||||+|+++|..|+++| +|+|||+.+..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 469999999999999999999999 99999998754
No 165
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.85 E-value=1.2e-05 Score=88.92 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=34.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.++||+|||||++||++|..|+++|.+|+|+||++.+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHY 46 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4589999999999999999999999999999999865
No 166
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.84 E-value=1.4e-05 Score=87.04 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=32.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCC--EEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIK--CSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~--v~lvEr~~~~ 78 (712)
.+|+|||||++|+++|..|+++|.+ |+|||+.+..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCC
Confidence 4899999999999999999999988 9999998754
No 167
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.84 E-value=4.5e-05 Score=83.81 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=30.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKAF 78 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~G--i~v~lvEr~~~~ 78 (712)
+|+||||||+|+++|..|+++| .+|+|||+.+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 6999999999999999999998 579999998653
No 168
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.82 E-value=2.3e-05 Score=86.00 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=32.4
Q ss_pred cCEEEECCCHHHHHHHHHHHh--CCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTK--LGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar--~Gi~v~lvEr~~~~ 78 (712)
.+|+|||||++|+++|..|++ .|++|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 689999999999999999999 89999999998643
No 169
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.80 E-value=6.9e-05 Score=82.62 Aligned_cols=100 Identities=18% Similarity=0.203 Sum_probs=73.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. .+ .
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------~~-~---------------------- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP----------------SF-D---------------------- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------TS-C----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh----------------hh-h----------------------
Confidence 35799999999999999999999999999998764210 00 0
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+.+.|.+.+++.|+ ++++++++++++.
T Consensus 208 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 236 (450)
T 1ges_A 208 --------------------------------PMISETLVEVMNAEGP-------------------QLHTNAIPKAVVK 236 (450)
T ss_dssp --------------------------------HHHHHHHHHHHHHHSC-------------------EEECSCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 0122344555666676 9999999999988
Q ss_pred cCCe-EEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 203 ~~~~-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
++++ +.+++. +|+ ++.+|.||.|.|.++.+
T Consensus 237 ~~~~~~~v~~~---~g~----~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 237 NTDGSLTLELE---DGR----SETVDCLIWAIGREPAN 267 (450)
T ss_dssp CTTSCEEEEET---TSC----EEEESEEEECSCEEESC
T ss_pred eCCcEEEEEEC---CCc----EEEcCEEEECCCCCcCC
Confidence 7654 555442 453 68999999999977643
No 170
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.80 E-value=0.00021 Score=78.85 Aligned_cols=142 Identities=13% Similarity=0.106 Sum_probs=86.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCCCCc----eeecCHhHHHHHHhhhcHH--HHHHhcCCCccc
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTHPQ----AHFINNRYALVFRKLDGLA--EEIERSQPPVDL 114 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~~~~~r----a~~i~~rtmeilr~l~Gl~--d~l~~~~~~~~~ 114 (712)
..+|+|||||.+|+-+|..|++. |.+|++++|.+...+... ....++...+.|..+ .-. ..+.+.....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l-~~~~~~~~~~~~~~~-- 303 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSR-EHAERERLLREYHNT-- 303 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHS-CHHHHHHHHHHTGGG--
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcC-CHHHHHHHHHHhhcc--
Confidence 45899999999999999999999 999999999986533211 123345555555544 111 1111110000
Q ss_pred cceeEeeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHh-cCceeeccCccccccccccccceEEe
Q 005134 115 WRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILM 193 (712)
Q Consensus 115 ~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~v~~ 193 (712)
. .... ...+.....+.+..+.+.. .+ +++++
T Consensus 304 ------------------------~----~~~~-~~~~~~~~~~~l~~~~~~~~~~-------------------v~i~~ 335 (463)
T 3s5w_A 304 ------------------------N----YSVV-DTDLIERIYGVFYRQKVSGIPR-------------------HAFRC 335 (463)
T ss_dssp ------------------------T----SSCB-CHHHHHHHHHHHHHHHHHCCCC-------------------SEEET
T ss_pred ------------------------C----CCcC-CHHHHHHHHHHHHHHHhcCCCC-------------------eEEEe
Confidence 0 0000 0000111122222233322 23 49999
Q ss_pred CcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCc
Q 005134 194 GHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (712)
Q Consensus 194 g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (712)
+++|++++.+++++.+++....+|+ +.++.+|+||-|-|...
T Consensus 336 ~~~v~~v~~~~~~~~v~~~~~~~g~--~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 336 MTTVERATATAQGIELALRDAGSGE--LSVETYDAVILATGYER 377 (463)
T ss_dssp TEEEEEEEEETTEEEEEEEETTTCC--EEEEEESEEEECCCEEC
T ss_pred CCEEEEEEecCCEEEEEEEEcCCCC--eEEEECCEEEEeeCCCC
Confidence 9999999999899888887654554 45799999999999664
No 171
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.78 E-value=3.6e-05 Score=82.98 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=31.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~G--i~v~lvEr~~ 76 (712)
++||+||||||+|+++|..|+++| ++|+|+|++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 489999999999999999999999 6799999875
No 172
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.77 E-value=1.4e-05 Score=89.84 Aligned_cols=38 Identities=37% Similarity=0.507 Sum_probs=35.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~G-i~v~lvEr~~~~ 78 (712)
+.++||+|||||++||++|..|+++| ++|+|+|++..+
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 55689999999999999999999999 999999998754
No 173
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.75 E-value=0.00015 Score=80.38 Aligned_cols=104 Identities=16% Similarity=0.335 Sum_probs=77.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. + .
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~----------------~-~---------------------- 217 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT----------------M-D---------------------- 217 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT----------------S-C----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc----------------c-c----------------------
Confidence 357999999999999999999999999999998643110 0 0
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+.+.|.+.+++.|+ ++++++++++++.
T Consensus 218 --------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 246 (470)
T 1dxl_A 218 --------------------------------AEIRKQFQRSLEKQGM-------------------KFKLKTKVVGVDT 246 (470)
T ss_dssp --------------------------------HHHHHHHHHHHHHSSC-------------------CEECSEEEEEEEC
T ss_pred --------------------------------HHHHHHHHHHHHHcCC-------------------EEEeCCEEEEEEE
Confidence 0122345555666776 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
+++++.+++....+|+ ..++.+|.||.|.|....
T Consensus 247 ~~~~~~v~~~~~~~g~--~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 247 SGDGVKLTVEPSAGGE--QTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp SSSSEEEEEEESSSCC--CEEEEESEEECCCCEEEC
T ss_pred cCCeEEEEEEecCCCc--ceEEECCEEEECCCCCcC
Confidence 7777777665322332 247899999999998764
No 174
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.75 E-value=3.8e-05 Score=85.76 Aligned_cols=37 Identities=27% Similarity=0.539 Sum_probs=33.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..++||+||||||+||++|+.|+++ .+|+|||+.+.+
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~ 142 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWL 142 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSS
T ss_pred cccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCC
Confidence 3457999999999999999999999 999999998754
No 175
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.73 E-value=2.4e-05 Score=85.42 Aligned_cols=37 Identities=30% Similarity=0.571 Sum_probs=34.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~G-i~v~lvEr~~~~ 78 (712)
.++||+|||||++||++|+.|+++| ++|+|+|+++.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 4589999999999999999999999 999999998754
No 176
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.71 E-value=0.00024 Score=78.79 Aligned_cols=105 Identities=19% Similarity=0.333 Sum_probs=76.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. .+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------~~------------------------ 218 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV---------------GI------------------------ 218 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS---------------SC------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc---------------cc------------------------
Confidence 357999999999999999999999999999998653210 00
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
...+...|.+.+++.|+ ++++++++++++.
T Consensus 219 -------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 248 (474)
T 1zmd_A 219 -------------------------------DMEISKNFQRILQKQGF-------------------KFKLNTKVTGATK 248 (474)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEeCceEEEEEE
Confidence 01122345556667776 9999999999998
Q ss_pred cCCe-EEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 203 ~~~~-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
++++ +.+++....+++ ..++.+|.||.|.|....
T Consensus 249 ~~~~~~~v~~~~~~~~~--~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 249 KSDGKIDVSIEAASGGK--AEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp CTTSCEEEEEEETTSCC--CEEEEESEEEECSCEEEC
T ss_pred cCCceEEEEEEecCCCC--ceEEEcCEEEECcCCCcC
Confidence 7766 766654321222 247899999999997653
No 177
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.68 E-value=2.9e-05 Score=83.85 Aligned_cols=38 Identities=29% Similarity=0.390 Sum_probs=34.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..++||+|||||++||++|..|+++|++|+|+|+++..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 45689999999999999999999999999999998653
No 178
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.67 E-value=3.1e-05 Score=84.88 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=30.3
Q ss_pred CEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKA 77 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~G--i~v~lvEr~~~ 77 (712)
+|+|||||++|+++|..|++.+ ++|+|||+++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 6999999999999999999876 89999998864
No 179
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.66 E-value=3.1e-05 Score=84.05 Aligned_cols=37 Identities=24% Similarity=0.392 Sum_probs=34.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~-Gi~v~lvEr~~~~ 78 (712)
.++||+|||||++||++|..|+++ |++|+|+|+++.+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 358999999999999999999999 9999999998754
No 180
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.65 E-value=2.4e-05 Score=86.67 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=31.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr 74 (712)
.++||+||||||+||++|+.|+++|++|+||||
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk 36 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE 36 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC
Confidence 468999999999999999999999999999999
No 181
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.64 E-value=0.00018 Score=79.14 Aligned_cols=36 Identities=25% Similarity=0.436 Sum_probs=33.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 346899999999999999999999999999999864
No 182
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.62 E-value=0.00038 Score=77.05 Aligned_cols=103 Identities=17% Similarity=0.360 Sum_probs=75.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d---------------------------------- 214 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-----LD---------------------------------- 214 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SC----------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-----CC----------------------------------
Confidence 358999999999999999999999999999988653110 00
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHH-HhcCceeeccCccccccccccccceEEeCcEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQL-EKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~ 201 (712)
..+...|.+.+ ++.|+ ++++++++++++
T Consensus 215 --------------------------------~~~~~~l~~~l~~~~gv-------------------~i~~~~~v~~i~ 243 (468)
T 2qae_A 215 --------------------------------EDVTNALVGALAKNEKM-------------------KFMTSTKVVGGT 243 (468)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTCC-------------------EEECSCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHhhcCCc-------------------EEEeCCEEEEEE
Confidence 11223455556 66676 999999999999
Q ss_pred EcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 202 ~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
.+++++.+++.. .+|+ ..++.+|.||.|-|.++.
T Consensus 244 ~~~~~~~v~~~~-~~g~--~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 244 NNGDSVSLEVEG-KNGK--RETVTCEALLVSVGRRPF 277 (468)
T ss_dssp ECSSSEEEEEEC-C-----EEEEEESEEEECSCEEEC
T ss_pred EcCCeEEEEEEc-CCCc--eEEEECCEEEECCCcccC
Confidence 877777666642 1332 347899999999997764
No 183
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.60 E-value=0.00045 Score=71.83 Aligned_cols=100 Identities=14% Similarity=0.209 Sum_probs=72.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeeec
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~~ 123 (712)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.... .
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~----------------------------------- 183 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA-------E----------------------------------- 183 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------C-----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------C-----------------------------------
Confidence 5799999999999999999999999999998764310 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEc
Q 005134 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (712)
Q Consensus 124 ~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~ 203 (712)
..+.+.|.+.+++.|+ ++++++++++++.+
T Consensus 184 -------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~~ 213 (320)
T 1trb_A 184 -------------------------------KILIKRLMDKVENGNI-------------------ILHTNRTLEEVTGD 213 (320)
T ss_dssp -------------------------------HHHHHHHHHHHHTSSE-------------------EEECSCEEEEEEEC
T ss_pred -------------------------------HHHHHHHHHhcccCCe-------------------EEEcCceeEEEEcC
Confidence 0112234445556665 99999999999887
Q ss_pred CCeEE-EEEEeccC-CceeeEEEEecEEEeccCCCc
Q 005134 204 DQCIN-VIASFLKE-GKCTERNIQCNILIGTDGAGS 237 (712)
Q Consensus 204 ~~~v~-v~v~~~~~-g~~~~~~i~ad~VVgADG~~S 237 (712)
++.++ +++.+..+ |+ ..++.+|.||.|-|...
T Consensus 214 ~~~v~~v~~~~~~~~g~--~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 214 QMGVTGVRLRDTQNSDN--IESLDVAGLFVAIGHSP 247 (320)
T ss_dssp SSSEEEEEEECCTTCCC--CEEEECSEEEECSCEEE
T ss_pred CCceEEEEEEeccCCCc--eEEEEcCEEEEEeCCCC
Confidence 75543 55542212 32 35789999999999664
No 184
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.60 E-value=2.8e-05 Score=86.82 Aligned_cols=36 Identities=25% Similarity=0.234 Sum_probs=33.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..++||+||||||+|+++|+.|+++|.+|+||||.+
T Consensus 6 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 6 VINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 346999999999999999999999999999999964
No 185
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.60 E-value=0.00026 Score=78.35 Aligned_cols=99 Identities=19% Similarity=0.275 Sum_probs=73.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeeec
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~~ 123 (712)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+-. .+ +
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~----------------~~-~----------------------- 206 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF----------------QF-D----------------------- 206 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------TS-C-----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc----------------cc-C-----------------------
Confidence 5799999999999999999999999999998764310 00 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEc
Q 005134 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (712)
Q Consensus 124 ~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~ 203 (712)
..+...|.+.+++.|+ ++++++++++++.+
T Consensus 207 -------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~~ 236 (463)
T 2r9z_A 207 -------------------------------PLLSATLAENMHAQGI-------------------ETHLEFAVAALERD 236 (463)
T ss_dssp -------------------------------HHHHHHHHHHHHHTTC-------------------EEESSCCEEEEEEE
T ss_pred -------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEEe
Confidence 0111234455566676 99999999999987
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 204 ~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
++++.+++. +|+ + ++.+|.||.|.|.++.
T Consensus 237 ~~~~~v~~~---~G~--~-~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 237 AQGTTLVAQ---DGT--R-LEGFDSVIWAVGRAPN 265 (463)
T ss_dssp TTEEEEEET---TCC--E-EEEESEEEECSCEEES
T ss_pred CCeEEEEEe---CCc--E-EEEcCEEEECCCCCcC
Confidence 777655542 453 2 6899999999997653
No 186
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.59 E-value=7.2e-05 Score=83.48 Aligned_cols=37 Identities=35% Similarity=0.448 Sum_probs=34.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
...||+|||||++||++|..|+++|++|+|+|+++.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~ 68 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERP 68 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 4579999999999999999999999999999998754
No 187
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.56 E-value=0.00047 Score=76.59 Aligned_cols=103 Identities=19% Similarity=0.231 Sum_probs=75.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+-+. + .
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~----------------~---~-------------------- 225 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG----------------A---D-------------------- 225 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT----------------S---C--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc----------------c---C--------------------
Confidence 458999999999999999999999999999987643110 0 0
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+...|.+.+++.|+ ++++++++++++.
T Consensus 226 --------------------------------~~~~~~l~~~l~~~gV-------------------~i~~~~~v~~i~~ 254 (482)
T 1ojt_A 226 --------------------------------RDLVKVWQKQNEYRFD-------------------NIMVNTKTVAVEP 254 (482)
T ss_dssp --------------------------------HHHHHHHHHHHGGGEE-------------------EEECSCEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHhcCC-------------------EEEECCEEEEEEE
Confidence 0122344555666666 9999999999998
Q ss_pred cCCeEEEEEEeccC-CceeeEEEEecEEEeccCCCchh
Q 005134 203 TDQCINVIASFLKE-GKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 203 ~~~~v~v~v~~~~~-g~~~~~~i~ad~VVgADG~~S~V 239 (712)
+++++.+++.+..+ |+ ++.+|.||.|-|.+...
T Consensus 255 ~~~~~~v~~~~~~~~g~----~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 255 KEDGVYVTFEGANAPKE----PQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp ETTEEEEEEESSSCCSS----CEEESCEEECCCEEECG
T ss_pred cCCeEEEEEeccCCCce----EEEcCEEEECcCCCcCC
Confidence 87777776652111 32 57899999999987654
No 188
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.52 E-value=0.00063 Score=75.15 Aligned_cols=101 Identities=20% Similarity=0.362 Sum_probs=75.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~~---------------------------------- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-----ED---------------------------------- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SC----------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-----cC----------------------------------
Confidence 357999999999999999999999999999998643110 00
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+...|.+.+++.|+ ++++++++++++.
T Consensus 212 --------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 240 (464)
T 2a8x_A 212 --------------------------------ADVSKEIEKQFKKLGV-------------------TILTATKVESIAD 240 (464)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTC-------------------EEECSCEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHcCC-------------------EEEeCcEEEEEEE
Confidence 0122334555566676 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCc
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (712)
+++++.+++. ++|+ ..++.+|.||.|-|...
T Consensus 241 ~~~~~~v~~~--~~g~--~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 241 GGSQVTVTVT--KDGV--AQELKAEKVLQAIGFAP 271 (464)
T ss_dssp CSSCEEEEEE--SSSC--EEEEEESEEEECSCEEE
T ss_pred cCCeEEEEEE--cCCc--eEEEEcCEEEECCCCCc
Confidence 7777766654 2342 34789999999999764
No 189
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.52 E-value=6.4e-05 Score=83.72 Aligned_cols=38 Identities=34% Similarity=0.496 Sum_probs=34.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~G-i~v~lvEr~~~~ 78 (712)
+..+||+|||||++||++|+.|+++| .+|+|+|+++.+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 34689999999999999999999999 799999998754
No 190
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.52 E-value=5.1e-05 Score=81.87 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=33.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
+++|+|||||++||++|..|+++|++|+|+|+++.+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 479999999999999999999999999999998654
No 191
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.50 E-value=0.00053 Score=77.14 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=33.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
+|||+||||||+|+++|+.++++|.+|.|||+....
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~ 77 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPS 77 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccc
Confidence 589999999999999999999999999999987643
No 192
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.49 E-value=0.00064 Score=75.45 Aligned_cols=101 Identities=18% Similarity=0.228 Sum_probs=73.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... +.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d---------------------------------- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-----FD---------------------------------- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----SC----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-----cC----------------------------------
Confidence 357999999999999999999999999999988643110 00
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+...|.+.+++.|+ ++++++++++++.
T Consensus 226 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 254 (479)
T 2hqm_A 226 --------------------------------ECIQNTITDHYVKEGI-------------------NVHKLSKIVKVEK 254 (479)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHhCCe-------------------EEEeCCEEEEEEE
Confidence 0122234455566676 9999999999988
Q ss_pred cCCe--EEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 203 TDQC--INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 203 ~~~~--v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
++++ +.+++. +|+ .++.+|.||.|-|.+...
T Consensus 255 ~~~~~~~~v~~~---~G~---~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 255 NVETDKLKIHMN---DSK---SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp CC-CCCEEEEET---TSC---EEEEESEEEECSCEEECC
T ss_pred cCCCcEEEEEEC---CCc---EEEEcCEEEECCCCCCcc
Confidence 6655 555442 452 368999999999987654
No 193
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.48 E-value=0.0008 Score=74.97 Aligned_cols=101 Identities=18% Similarity=0.313 Sum_probs=74.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... +.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d~--------------------------------- 215 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-----QDE--------------------------------- 215 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-----CCH---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----CCH---------------------------------
Confidence 467999999999999999999999999999998753210 000
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
.+.+.+.+.+++. + ++++++++++++.
T Consensus 216 ---------------------------------~~~~~l~~~l~~~-V-------------------~i~~~~~v~~i~~ 242 (492)
T 3ic9_A 216 ---------------------------------EMKRYAEKTFNEE-F-------------------YFDAKARVISTIE 242 (492)
T ss_dssp ---------------------------------HHHHHHHHHHHTT-S-------------------EEETTCEEEEEEE
T ss_pred ---------------------------------HHHHHHHHHHhhC-c-------------------EEEECCEEEEEEE
Confidence 1122333444443 4 8999999999999
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCc
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (712)
+++++++++.. .+|+ +.++.+|.||.|-|...
T Consensus 243 ~~~~v~v~~~~-~~G~--~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 243 KEDAVEVIYFD-KSGQ--KTTESFQYVLAATGRKA 274 (492)
T ss_dssp CSSSEEEEEEC-TTCC--EEEEEESEEEECSCCEE
T ss_pred cCCEEEEEEEe-CCCc--eEEEECCEEEEeeCCcc
Confidence 88888776652 2342 35799999999999764
No 194
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.47 E-value=6.4e-05 Score=80.58 Aligned_cols=35 Identities=37% Similarity=0.450 Sum_probs=32.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
+||+|||||++||++|..|+++|++|+|+|+++.+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 68999999999999999999999999999998643
No 195
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.46 E-value=8.5e-05 Score=86.54 Aligned_cols=37 Identities=35% Similarity=0.479 Sum_probs=34.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..+.||+||||||+||++|..|+++|++|+||||.+.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~ 425 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRD 425 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 4568999999999999999999999999999999874
No 196
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.45 E-value=0.00019 Score=80.30 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=33.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..+.+|||||||++|+++|..|++.+++|+|||+++.
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 3456899999999999999999999999999999874
No 197
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.45 E-value=0.00086 Score=74.82 Aligned_cols=100 Identities=16% Similarity=0.225 Sum_probs=75.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.+. +.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d---------------------------------- 222 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-----ED---------------------------------- 222 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-----SS----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-----cC----------------------------------
Confidence 368999999999999999999999999999988643110 00
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+.+.|.+.+++.|+ ++++++++++++.
T Consensus 223 --------------------------------~~~~~~l~~~l~~~GV-------------------~i~~~~~V~~i~~ 251 (499)
T 1xdi_A 223 --------------------------------ADAALVLEESFAERGV-------------------RLFKNARAASVTR 251 (499)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEETTCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 0123345555667776 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
++++++++. .+|+ ++.+|.||.|-|.++..
T Consensus 252 ~~~~v~v~~---~~g~----~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 252 TGAGVLVTM---TDGR----TVEGSHALMTIGSVPNT 281 (499)
T ss_dssp CSSSEEEEE---TTSC----EEEESEEEECCCEEECC
T ss_pred eCCEEEEEE---CCCc----EEEcCEEEECCCCCcCC
Confidence 777765543 2342 68999999999988654
No 198
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.43 E-value=0.00046 Score=74.59 Aligned_cols=33 Identities=24% Similarity=0.449 Sum_probs=29.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKA 77 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~G--i~v~lvEr~~~ 77 (712)
+|+||||||+|+++|..|+++| ++|+|||+++.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 6999999999999999999876 68999998764
No 199
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.41 E-value=0.00082 Score=73.06 Aligned_cols=100 Identities=18% Similarity=0.279 Sum_probs=74.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+... .+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~---------------~~------------------------ 192 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR---------------VA------------------------ 192 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT---------------TS------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh---------------hc------------------------
Confidence 457999999999999999999999999999988754110 00
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
...+.+.|.+.+++.|+ ++++++++++++.
T Consensus 193 -------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 222 (415)
T 3lxd_A 193 -------------------------------GEALSEFYQAEHRAHGV-------------------DLRTGAAMDCIEG 222 (415)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEEETCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHhCCC-------------------EEEECCEEEEEEe
Confidence 01233445566667776 9999999999998
Q ss_pred cCCeEE-EEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 203 TDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 203 ~~~~v~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
+++.++ +++ .+|+ ++.||+||.|-|....
T Consensus 223 ~~~~v~~v~l---~dG~----~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 223 DGTKVTGVRM---QDGS----VIPADIVIVGIGIVPC 252 (415)
T ss_dssp SSSBEEEEEE---SSSC----EEECSEEEECSCCEES
T ss_pred cCCcEEEEEe---CCCC----EEEcCEEEECCCCccC
Confidence 776653 333 2453 6899999999997653
No 200
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.39 E-value=0.00012 Score=80.85 Aligned_cols=37 Identities=27% Similarity=0.437 Sum_probs=33.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
...+|+||||||+||++|..|++.|++|+|||+.+.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 3579999999999999999999999999999998653
No 201
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.38 E-value=0.00011 Score=82.23 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=32.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
++||+||||||+|+++|..|+++|.+|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999974
No 202
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.38 E-value=0.00016 Score=76.87 Aligned_cols=34 Identities=29% Similarity=0.398 Sum_probs=32.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
+||+|||||++|+.+|+.|+++|++|+|||+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 6899999999999999999999999999999874
No 203
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.37 E-value=0.00094 Score=74.35 Aligned_cols=100 Identities=14% Similarity=0.183 Sum_probs=74.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC---CCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeE
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKL---GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~---Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~ 119 (712)
.-+|+|||||++|+-+|..|++. |.+|+|+|+.+.+-+. + .
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~----------------~---d----------------- 230 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG----------------F---D----------------- 230 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT----------------S---C-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc----------------c---C-----------------
Confidence 35899999999999999999999 9999999988643110 0 0
Q ss_pred eeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 120 ~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
..+...|.+.+++.|+ ++++++++++
T Consensus 231 -----------------------------------~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~ 256 (490)
T 1fec_A 231 -----------------------------------SELRKQLTEQLRANGI-------------------NVRTHENPAK 256 (490)
T ss_dssp -----------------------------------HHHHHHHHHHHHHTTE-------------------EEEETCCEEE
T ss_pred -----------------------------------HHHHHHHHHHHHhCCC-------------------EEEeCCEEEE
Confidence 0122345556667776 9999999999
Q ss_pred EEEcCCe-EEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 200 VSATDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 200 v~~~~~~-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
++.++++ +.+++. +|+ ++.+|.||.|-|.+...
T Consensus 257 i~~~~~~~~~v~~~---~G~----~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 257 VTKNADGTRHVVFE---SGA----EADYDVVMLAIGRVPRS 290 (490)
T ss_dssp EEECTTSCEEEEET---TSC----EEEESEEEECSCEEESC
T ss_pred EEEcCCCEEEEEEC---CCc----EEEcCEEEEccCCCcCc
Confidence 9887654 555442 453 68999999999987643
No 204
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.37 E-value=0.00053 Score=76.61 Aligned_cols=101 Identities=17% Similarity=0.278 Sum_probs=73.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+-+. +.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d---------------------------------- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-----FD---------------------------------- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-----SC----------------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-----cc----------------------------------
Confidence 357999999999999999999999999999987653110 00
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+...|.+.+++.|+ ++++++++++++.
T Consensus 217 --------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 245 (500)
T 1onf_A 217 --------------------------------ESVINVLENDMKKNNI-------------------NIVTFADVVEIKK 245 (500)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEE
T ss_pred --------------------------------hhhHHHHHHHHHhCCC-------------------EEEECCEEEEEEE
Confidence 0122334555666676 9999999999987
Q ss_pred cCCe-EEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 203 ~~~~-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
++++ +.+++. +|+ + ++.+|.||.|-|.....
T Consensus 246 ~~~~~~~v~~~---~g~--~-~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 246 VSDKNLSIHLS---DGR--I-YEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp SSTTCEEEEET---TSC--E-EEEESEEEECCCBCCTT
T ss_pred cCCceEEEEEC---CCc--E-EEECCEEEECCCCCcCC
Confidence 6544 545442 453 1 38999999999987644
No 205
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.37 E-value=0.00049 Score=75.96 Aligned_cols=36 Identities=36% Similarity=0.576 Sum_probs=32.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 357999999999999999999999999999998643
No 206
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.35 E-value=0.00016 Score=79.33 Aligned_cols=37 Identities=22% Similarity=0.377 Sum_probs=34.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.++||+|||||++||++|..|++.|.+|+|+|+++.+
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 41 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYY 41 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCc
Confidence 4589999999999999999999999999999998754
No 207
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.35 E-value=0.00077 Score=73.77 Aligned_cols=100 Identities=13% Similarity=0.252 Sum_probs=72.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... .+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~---------------~~------------------------ 189 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER---------------VT------------------------ 189 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT---------------TS------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc---------------hh------------------------
Confidence 357999999999999999999999999999987642110 00
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
-..+...|.+.+++.|+ ++++++++++++.
T Consensus 190 -------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 219 (431)
T 1q1r_A 190 -------------------------------APPVSAFYEHLHREAGV-------------------DIRTGTQVCGFEM 219 (431)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------hHHHHHHHHHHHHhCCe-------------------EEEeCCEEEEEEe
Confidence 01223345556666776 9999999999987
Q ss_pred --cCCeE-EEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 203 --TDQCI-NVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 203 --~~~~v-~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
+++.+ .+++ .+|+ ++.+|.||.|-|....
T Consensus 220 ~~~~~~v~~v~~---~~G~----~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 220 STDQQKVTAVLC---EDGT----RLPADLVIAGIGLIPN 251 (431)
T ss_dssp CTTTCCEEEEEE---TTSC----EEECSEEEECCCEEEC
T ss_pred ccCCCcEEEEEe---CCCC----EEEcCEEEECCCCCcC
Confidence 44554 3333 2453 6899999999997653
No 208
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.34 E-value=0.001 Score=73.54 Aligned_cols=98 Identities=20% Similarity=0.388 Sum_probs=75.1
Q ss_pred cCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~-Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
-+|+|||||++|+-+|..|++. |.+|+++|+.+...... +
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~---------------~------------------------ 200 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF---------------T------------------------ 200 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT---------------S------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc---------------c------------------------
Confidence 5799999999999999999999 99999999875331100 0
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
...+...|.+.+++.|+ ++++++++++++.
T Consensus 201 -------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 230 (472)
T 3iwa_A 201 -------------------------------SKSLSQMLRHDLEKNDV-------------------VVHTGEKVVRLEG 230 (472)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHhcCC-------------------EEEeCCEEEEEEc
Confidence 01233455666677776 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCc
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (712)
+++.+++++. +|+ ++.+|.||.|-|...
T Consensus 231 ~~~~v~v~~~---~g~----~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 231 ENGKVARVIT---DKR----TLDADLVILAAGVSP 258 (472)
T ss_dssp SSSBEEEEEE---SSC----EEECSEEEECSCEEE
T ss_pred cCCeEEEEEe---CCC----EEEcCEEEECCCCCc
Confidence 7777776654 453 689999999999764
No 209
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.34 E-value=0.00014 Score=80.14 Aligned_cols=38 Identities=34% Similarity=0.468 Sum_probs=35.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
+..+||+|||+|++|+++|..|++.|.+|+|+||++..
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~ 55 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYY 55 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 45689999999999999999999999999999999754
No 210
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.33 E-value=0.00012 Score=80.91 Aligned_cols=35 Identities=17% Similarity=0.398 Sum_probs=32.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.++||+||||||+|+++|..|++.|++|+|||+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 35899999999999999999999999999999973
No 211
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.33 E-value=0.00077 Score=73.19 Aligned_cols=100 Identities=26% Similarity=0.397 Sum_probs=73.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.+. ++ .+ .
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l---------~~------~~---~-------------------- 184 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL---------VR------VL---G-------------------- 184 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------HH------HH---C--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc---------hh------hc---C--------------------
Confidence 3579999999999999999999999999999876432 00 00 0
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+.+.|.+.+++.|+ ++++++++++++.
T Consensus 185 --------------------------------~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 213 (410)
T 3ef6_A 185 --------------------------------RRIGAWLRGLLTELGV-------------------QVELGTGVVGFSG 213 (410)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEC
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEec
Confidence 1223345555666676 9999999999987
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
++....+++. +|+ ++.+|+||.|-|..+.
T Consensus 214 ~~~~~~v~~~---dg~----~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 214 EGQLEQVMAS---DGR----SFVADSALICVGAEPA 242 (410)
T ss_dssp SSSCCEEEET---TSC----EEECSEEEECSCEEEC
T ss_pred cCcEEEEEEC---CCC----EEEcCEEEEeeCCeec
Confidence 6543344443 453 6899999999998753
No 212
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.32 E-value=0.0012 Score=68.90 Aligned_cols=36 Identities=25% Similarity=0.388 Sum_probs=32.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.-+|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 357999999999999999999999999999987643
No 213
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.31 E-value=0.00012 Score=80.56 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=32.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.++||+||||||+|+++|..|++.|.+|+||||..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 35899999999999999999999999999999973
No 214
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.29 E-value=0.0024 Score=70.92 Aligned_cols=101 Identities=20% Similarity=0.243 Sum_probs=72.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+++..... .+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~--------------------~~d-------------------- 224 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR--------------------GFD-------------------- 224 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST--------------------TSC--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc--------------------cCC--------------------
Confidence 3579999999999999999999999999999753110 000
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+.+.+.+.+++.|+ ++++++++.+++.
T Consensus 225 --------------------------------~~~~~~l~~~l~~~gv-------------------~~~~~~~v~~i~~ 253 (488)
T 3dgz_A 225 --------------------------------QQMSSLVTEHMESHGT-------------------QFLKGCVPSHIKK 253 (488)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEEETEEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 0122344555666676 9999999999987
Q ss_pred c-CCeEEEEEEeccCCceeeEEEEecEEEeccCCC
Q 005134 203 T-DQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (712)
Q Consensus 203 ~-~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (712)
. ++.+.+++...++|+ +.++.+|.||.|-|..
T Consensus 254 ~~~~~~~v~~~~~~~g~--~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 254 LPTNQLQVTWEDHASGK--EDTGTFDTVLWAIGRV 286 (488)
T ss_dssp CTTSCEEEEEEETTTTE--EEEEEESEEEECSCEE
T ss_pred cCCCcEEEEEEeCCCCe--eEEEECCEEEEcccCC
Confidence 4 445667766433342 3568999999999954
No 215
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.28 E-value=0.00017 Score=79.62 Aligned_cols=35 Identities=34% Similarity=0.561 Sum_probs=32.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
+.++||+||||||+|+++|..|++.|.+|+|||+.
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 35689999999999999999999999999999993
No 216
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.27 E-value=0.0023 Score=66.07 Aligned_cols=35 Identities=17% Similarity=0.314 Sum_probs=32.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 36899999999999999999999999999998764
No 217
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.26 E-value=0.0016 Score=72.51 Aligned_cols=100 Identities=19% Similarity=0.235 Sum_probs=73.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC---CCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeE
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKL---GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~---Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~ 119 (712)
.-+|+|||||.+|+-+|..|++. |.+|+|+|+.+.+-.. + .
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~----------------~---d----------------- 234 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG----------------F---D----------------- 234 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT----------------S---C-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc----------------c---C-----------------
Confidence 35799999999999999999999 9999999987643110 0 0
Q ss_pred eeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 120 ~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
..+...|.+.+++.|+ ++++++++++
T Consensus 235 -----------------------------------~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~ 260 (495)
T 2wpf_A 235 -----------------------------------ETIREEVTKQLTANGI-------------------EIMTNENPAK 260 (495)
T ss_dssp -----------------------------------HHHHHHHHHHHHHTTC-------------------EEEESCCEEE
T ss_pred -----------------------------------HHHHHHHHHHHHhCCC-------------------EEEeCCEEEE
Confidence 0122344555666776 9999999999
Q ss_pred EEEcCCe-EEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 200 VSATDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 200 v~~~~~~-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
++.++++ +.+++. +|+ ++.+|.||.|-|.+...
T Consensus 261 i~~~~~~~~~v~~~---~G~----~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 261 VSLNTDGSKHVTFE---SGK----TLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp EEECTTSCEEEEET---TSC----EEEESEEEECSCEEECC
T ss_pred EEEcCCceEEEEEC---CCc----EEEcCEEEECCCCcccc
Confidence 9887654 545442 453 68999999999977543
No 218
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.25 E-value=0.0012 Score=73.40 Aligned_cols=35 Identities=34% Similarity=0.616 Sum_probs=32.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 46899999999999999999999999999998763
No 219
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.24 E-value=0.0013 Score=72.45 Aligned_cols=99 Identities=18% Similarity=0.325 Sum_probs=72.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... .+ +
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------~~-~---------------------- 190 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK---------------YF-D---------------------- 190 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT---------------TS-C----------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh---------------hh-h----------------------
Confidence 357999999999999999999999999999987643110 00 0
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+...|.+.+++.|+ ++++++++++++.
T Consensus 191 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 219 (452)
T 2cdu_A 191 --------------------------------KEFTDILAKDYEAHGV-------------------NLVLGSKVAAFEE 219 (452)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEEESSCEEEEEE
T ss_pred --------------------------------hhHHHHHHHHHHHCCC-------------------EEEcCCeeEEEEc
Confidence 1123345556667776 9999999999987
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCc
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (712)
+++.++. +. . +|+ ++.+|.||.|-|...
T Consensus 220 ~~~~v~~-v~-~-~g~----~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 220 VDDEIIT-KT-L-DGK----EIKSDIAILCIGFRP 247 (452)
T ss_dssp ETTEEEE-EE-T-TSC----EEEESEEEECCCEEE
T ss_pred CCCeEEE-EE-e-CCC----EEECCEEEECcCCCC
Confidence 6666542 22 2 342 689999999999764
No 220
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.23 E-value=0.002 Score=66.59 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 5799999999999999999999999999998764
No 221
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.23 E-value=0.0013 Score=69.85 Aligned_cols=35 Identities=26% Similarity=0.408 Sum_probs=32.1
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 198 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEF 198 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCC
Confidence 57999999999999999999999999999988643
No 222
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.17 E-value=0.0018 Score=73.36 Aligned_cols=34 Identities=35% Similarity=0.501 Sum_probs=31.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
-+|+|||||++|+-+|..|++.|.+|+++|+.+.
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 4799999999999999999999999999999764
No 223
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.14 E-value=0.0016 Score=70.66 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=32.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 179 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPR 179 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 36899999999999999999999999999999874
No 224
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.13 E-value=0.00032 Score=77.71 Aligned_cols=37 Identities=30% Similarity=0.429 Sum_probs=33.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~~~ 78 (712)
..+||+|||||++||++|+.|++.|+ +|+|+|+++.+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 35899999999999999999999999 89999998754
No 225
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.10 E-value=0.0027 Score=69.83 Aligned_cols=97 Identities=21% Similarity=0.254 Sum_probs=72.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeeec
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~~ 123 (712)
-+|+|||||+.|+-+|..|++.|.+|+|+|+.+...... +
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------~------------------------- 187 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY---------------F------------------------- 187 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT---------------C-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc---------------C-------------------------
Confidence 579999999999999999999999999999876431100 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEc
Q 005134 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (712)
Q Consensus 124 ~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~ 203 (712)
-..+.+.|.+.+++.|+ ++++++++++++.+
T Consensus 188 ------------------------------d~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~~ 218 (452)
T 3oc4_A 188 ------------------------------DKEMVAEVQKSLEKQAV-------------------IFHFEETVLGIEET 218 (452)
T ss_dssp ------------------------------CHHHHHHHHHHHHTTTE-------------------EEEETCCEEEEEEC
T ss_pred ------------------------------CHHHHHHHHHHHHHcCC-------------------EEEeCCEEEEEEcc
Confidence 01233445566667776 99999999999987
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEeccCCCc
Q 005134 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (712)
Q Consensus 204 ~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (712)
++++.+++ +++ ++.+|.||.|-|.+.
T Consensus 219 ~~~v~v~~---~~g-----~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 219 ANGIVLET---SEQ-----EISCDSGIFALNLHP 244 (452)
T ss_dssp SSCEEEEE---SSC-----EEEESEEEECSCCBC
T ss_pred CCeEEEEE---CCC-----EEEeCEEEECcCCCC
Confidence 77774443 233 589999999999653
No 226
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.09 E-value=0.00026 Score=78.87 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=30.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHh-CCCCEEEEcC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEK 74 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar-~Gi~v~lvEr 74 (712)
++||+||||||+|+++|+.|++ .|.+|+|||+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 5899999999999999999999 9999999994
No 227
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.08 E-value=0.0032 Score=65.79 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=32.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.-+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ 186 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc
Confidence 35799999999999999999999999999998764
No 228
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.08 E-value=0.0023 Score=71.32 Aligned_cols=99 Identities=16% Similarity=0.262 Sum_probs=71.4
Q ss_pred cCEEEECCCHHHHHHHHHHHh----CCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeE
Q 005134 44 VPVLIVGAGPVGLVLSILLTK----LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar----~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~ 119 (712)
-+|+|||||++|+-+|..|++ .|++|+++++.+.+... .+
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~---------------~l--------------------- 224 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK---------------IL--------------------- 224 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT---------------TS---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc---------------cC---------------------
Confidence 579999999999999999987 48899999876532100 00
Q ss_pred eeecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEE
Q 005134 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (712)
Q Consensus 120 ~~~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~ 199 (712)
+ ..+...+.+.+++.|+ ++++++++++
T Consensus 225 ---------------------------------~-~~~~~~~~~~l~~~GV-------------------~v~~~~~V~~ 251 (493)
T 1m6i_A 225 ---------------------------------P-EYLSNWTMEKVRREGV-------------------KVMPNAIVQS 251 (493)
T ss_dssp ---------------------------------C-HHHHHHHHHHHHTTTC-------------------EEECSCCEEE
T ss_pred ---------------------------------C-HHHHHHHHHHHHhcCC-------------------EEEeCCEEEE
Confidence 0 1223345556667776 9999999999
Q ss_pred EEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 200 v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
++.+++.+.+++. +|+ ++.+|+||.|-|....
T Consensus 252 i~~~~~~~~v~l~---dG~----~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 252 VGVSSGKLLIKLK---DGR----KVETDHIVAAVGLEPN 283 (493)
T ss_dssp EEEETTEEEEEET---TSC----EEEESEEEECCCEEEC
T ss_pred EEecCCeEEEEEC---CCC----EEECCEEEECCCCCcc
Confidence 9877766655442 453 6899999999997653
No 229
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.07 E-value=0.00033 Score=80.09 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=32.4
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
..++||+||||||+||++|..|+++|++|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34589999999999999999999999999999984
No 230
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.06 E-value=0.0004 Score=81.33 Aligned_cols=36 Identities=31% Similarity=0.432 Sum_probs=33.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
...+|+||||||+||++|..|+++|++|+|||+.+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 457999999999999999999999999999999875
No 231
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.06 E-value=0.00039 Score=78.59 Aligned_cols=37 Identities=32% Similarity=0.473 Sum_probs=34.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.++||+|||||++|+++|..|++.|++|+|+|+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4589999999999999999999999999999998754
No 232
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.05 E-value=0.00026 Score=78.16 Aligned_cols=36 Identities=25% Similarity=0.329 Sum_probs=33.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHh-C------CCCEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTK-L------GIKCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar-~------Gi~v~lvEr~~~ 77 (712)
..++|+||||||+|+++|..|++ + |++|+|||+.+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 35799999999999999999999 7 999999999864
No 233
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.04 E-value=0.0039 Score=64.70 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=31.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 5799999999999999999999999999998753
No 234
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.03 E-value=0.00033 Score=78.12 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=31.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHh-CCCCEEEEcC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEK 74 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar-~Gi~v~lvEr 74 (712)
.++||+||||||+|+++|+.|++ .|++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 36899999999999999999999 9999999995
No 235
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.03 E-value=0.0026 Score=70.75 Aligned_cols=35 Identities=23% Similarity=0.423 Sum_probs=32.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDT 228 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccc
Confidence 35799999999999999999999999999998864
No 236
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.01 E-value=0.0075 Score=67.52 Aligned_cols=32 Identities=28% Similarity=0.434 Sum_probs=30.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
-+|+|||||++|+-+|..|++.|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999974
No 237
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.95 E-value=0.0025 Score=68.12 Aligned_cols=35 Identities=26% Similarity=0.484 Sum_probs=32.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 58999999999999999999999999999998743
No 238
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.93 E-value=0.00055 Score=79.36 Aligned_cols=37 Identities=24% Similarity=0.481 Sum_probs=34.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..+||+||||||+|+++|..|+++|++|+|||+.+..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4579999999999999999999999999999998754
No 239
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.92 E-value=0.00057 Score=79.10 Aligned_cols=37 Identities=27% Similarity=0.484 Sum_probs=34.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
...+|+||||||+||++|..|++.|++|+|+|+++.+
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4579999999999999999999999999999998754
No 240
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.92 E-value=0.0026 Score=70.18 Aligned_cols=99 Identities=20% Similarity=0.290 Sum_probs=73.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+... +
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~----------------~------------------------ 209 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR----------------F------------------------ 209 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------S------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc----------------c------------------------
Confidence 467999999999999999999999999999987632100 0
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
-..+.+.|.+.+++.|+ +++.++++++++.
T Consensus 210 -------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 239 (463)
T 4dna_A 210 -------------------------------DQDMRRGLHAAMEEKGI-------------------RILCEDIIQSVSA 239 (463)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEECCCEEEEEEE
Confidence 01223445566677776 9999999999998
Q ss_pred cCCe-EEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 203 ~~~~-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
++++ +.++. . ++| . +.+|.||.|-|....
T Consensus 240 ~~~~~~~v~~-~-~~g----~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 240 DADGRRVATT-M-KHG----E-IVADQVMLALGRMPN 269 (463)
T ss_dssp CTTSCEEEEE-S-SSC----E-EEESEEEECSCEEES
T ss_pred cCCCEEEEEE-c-CCC----e-EEeCEEEEeeCcccC
Confidence 7666 34431 2 244 2 899999999997654
No 241
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.92 E-value=0.004 Score=64.95 Aligned_cols=36 Identities=28% Similarity=0.523 Sum_probs=32.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.-+|+|||+|++|+-+|..|++.|.+|+|+++.+.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 357999999999999999999999999999988643
No 242
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.91 E-value=0.0052 Score=69.02 Aligned_cols=99 Identities=19% Similarity=0.136 Sum_probs=73.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEee
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~ 121 (712)
..-+++|||||+.|+=+|..|++.|.+|+|+++.... + +..
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L---~-----------------~~D------------------- 262 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL---R-----------------GFD------------------- 262 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS---T-----------------TSC-------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc---c-----------------ccc-------------------
Confidence 3467999999999999999999999999999874321 0 110
Q ss_pred ecCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEE
Q 005134 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (712)
Q Consensus 122 ~~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~ 201 (712)
.++...|.+.+++.|+ +++.++++.+++
T Consensus 263 ---------------------------------~ei~~~l~~~l~~~gi-------------------~~~~~~~v~~~~ 290 (542)
T 4b1b_A 263 ---------------------------------QQCAVKVKLYMEEQGV-------------------MFKNGILPKKLT 290 (542)
T ss_dssp ---------------------------------HHHHHHHHHHHHHTTC-------------------EEEETCCEEEEE
T ss_pred ---------------------------------hhHHHHHHHHHHhhcc-------------------eeecceEEEEEE
Confidence 1122345555666776 999999999999
Q ss_pred EcCCeEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 202 ~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
..++.+++.+. +++ ++.+|.|+.|-|.+-.
T Consensus 291 ~~~~~~~v~~~---~~~----~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 291 KMDDKILVEFS---DKT----SELYDTVLYAIGRKGD 320 (542)
T ss_dssp EETTEEEEEET---TSC----EEEESEEEECSCEEES
T ss_pred ecCCeEEEEEc---CCC----eEEEEEEEEcccccCC
Confidence 99998776653 332 5679999999996543
No 243
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.90 E-value=0.00059 Score=80.69 Aligned_cols=37 Identities=27% Similarity=0.484 Sum_probs=34.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
...+|+||||||+||++|+.|+++|++|+|||++..+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 3479999999999999999999999999999998754
No 244
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.90 E-value=0.0077 Score=62.62 Aligned_cols=34 Identities=21% Similarity=0.457 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 5799999999999999999999999999998764
No 245
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.88 E-value=0.0011 Score=75.44 Aligned_cols=40 Identities=30% Similarity=0.309 Sum_probs=36.0
Q ss_pred CCCcccCEEEECCCHHHHHHHHHHHh-CCCCEEEEcCCCCC
Q 005134 39 SNEAVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAF 78 (712)
Q Consensus 39 ~~~~~~~VlIVGaGpaGL~~A~~Lar-~Gi~v~lvEr~~~~ 78 (712)
|.+.++|++|||+|++|+++|..|++ .|++|+|||+....
T Consensus 20 ~~~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 20 VAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cCcccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 33567999999999999999999999 79999999998755
No 246
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.86 E-value=0.0006 Score=82.27 Aligned_cols=37 Identities=30% Similarity=0.499 Sum_probs=33.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.++||+||||||+||++|+.|+++|++|+|||+.+.+
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~ 163 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 4589999999999999999999999999999998653
No 247
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.84 E-value=0.0006 Score=76.00 Aligned_cols=37 Identities=16% Similarity=0.436 Sum_probs=33.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~ 78 (712)
.+++|+||||||+|+++|..|+++ |.+|+|||+.+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 468999999999999999999887 8999999998754
No 248
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.81 E-value=0.0007 Score=74.76 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=33.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~G--i~v~lvEr~~~~ 78 (712)
.++|+||||||+|+.+|..|+++| ++|+|||+.+.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 479999999999999999999999 999999998753
No 249
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.80 E-value=0.0046 Score=65.45 Aligned_cols=34 Identities=15% Similarity=0.254 Sum_probs=29.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
-+|+|||+|++|+-+|..|++.|.+|+|+++.+.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 4799999999999999999999999999998764
No 250
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.79 E-value=0.00065 Score=76.52 Aligned_cols=37 Identities=32% Similarity=0.395 Sum_probs=33.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..++|+||||||++|+++|..|++ |.+|+|+|+.+..
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 356999999999999999999999 9999999998753
No 251
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.78 E-value=0.00089 Score=81.31 Aligned_cols=36 Identities=25% Similarity=0.557 Sum_probs=33.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~~~ 78 (712)
..+|+||||||+||++|..|+++|+ +|+||||.+.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 5799999999999999999999999 79999997643
No 252
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.77 E-value=0.008 Score=62.02 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=32.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.-+|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTF 189 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCC
Confidence 357999999999999999999999999999987643
No 253
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.75 E-value=0.00081 Score=75.44 Aligned_cols=36 Identities=22% Similarity=0.418 Sum_probs=32.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHh-CCCCEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar-~Gi~v~lvEr~~~ 77 (712)
.++|+||||||++|+++|..|++ .|++|+|||+...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 46999999999999999999998 6899999999865
No 254
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.68 E-value=0.012 Score=60.49 Aligned_cols=36 Identities=19% Similarity=0.367 Sum_probs=32.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.-+|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 357999999999999999999999999999987643
No 255
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.65 E-value=0.0011 Score=75.28 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=34.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKA 77 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~G-i~v~lvEr~~~ 77 (712)
..++|+||||||.+|+++|..|++.| ++|+|||+...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999998 89999999876
No 256
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.64 E-value=0.0012 Score=73.91 Aligned_cols=38 Identities=24% Similarity=0.448 Sum_probs=34.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
+.++||+|||+|++|+++|..|++.|++|+|||+....
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLW 40 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 35689999999999999999999999999999998743
No 257
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.63 E-value=0.0069 Score=62.90 Aligned_cols=35 Identities=17% Similarity=0.349 Sum_probs=31.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 35799999999999999999999999999998754
No 258
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.62 E-value=0.0072 Score=63.23 Aligned_cols=35 Identities=11% Similarity=0.330 Sum_probs=31.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 35799999999999999999999999999998754
No 259
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.62 E-value=0.0061 Score=69.37 Aligned_cols=105 Identities=19% Similarity=0.331 Sum_probs=74.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeeec
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~~ 123 (712)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+..... +.
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~----------------------------------- 227 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-----ID----------------------------------- 227 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----SC-----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-----CC-----------------------------------
Confidence 57999999999999999999999999999987643110 00
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEc
Q 005134 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (712)
Q Consensus 124 ~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~ 203 (712)
..+...|.+.+++.|+ ++++++++++++.+
T Consensus 228 -------------------------------~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~~ 257 (588)
T 3ics_A 228 -------------------------------YEMAAYVHEHMKNHDV-------------------ELVFEDGVDALEEN 257 (588)
T ss_dssp -------------------------------HHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEGG
T ss_pred -------------------------------HHHHHHHHHHHHHcCC-------------------EEEECCeEEEEecC
Confidence 1122344555666676 89999999999876
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEeccCCCchh--hcccCCCc
Q 005134 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV--RKLVGIDL 247 (712)
Q Consensus 204 ~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V--R~~lgi~~ 247 (712)
+++ +++. +|+ ++.+|.||.|-|..... -+.+|+..
T Consensus 258 ~~~--v~~~---~g~----~i~~D~Vi~a~G~~p~~~~l~~~g~~~ 294 (588)
T 3ics_A 258 GAV--VRLK---SGS----VIQTDMLILAIGVQPESSLAKGAGLAL 294 (588)
T ss_dssp GTE--EEET---TSC----EEECSEEEECSCEEECCHHHHHTTCCB
T ss_pred CCE--EEEC---CCC----EEEcCEEEEccCCCCChHHHHhcCceE
Confidence 665 3332 453 68999999999987543 33445543
No 260
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.55 E-value=0.00094 Score=77.02 Aligned_cols=36 Identities=28% Similarity=0.457 Sum_probs=33.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCC--------CCEEEEcCCC-CC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLG--------IKCSVLEKNK-AF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~G--------i~v~lvEr~~-~~ 78 (712)
..+|+|||||++||++|..|+++| ++|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999999 9999999987 54
No 261
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.49 E-value=0.03 Score=63.70 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=30.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
-+|+|||||++|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999986
No 262
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.46 E-value=0.0061 Score=66.83 Aligned_cols=34 Identities=18% Similarity=0.435 Sum_probs=31.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 4899999999999999999999999999998763
No 263
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.46 E-value=0.0017 Score=73.69 Aligned_cols=36 Identities=31% Similarity=0.403 Sum_probs=33.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNK 76 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~-Gi~v~lvEr~~ 76 (712)
...+|+||||||.+|+++|..|++. |++|+|||+.+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4569999999999999999999975 89999999987
No 264
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.45 E-value=0.0021 Score=71.90 Aligned_cols=38 Identities=32% Similarity=0.586 Sum_probs=34.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..++|++|||+|++|+++|..|++.|.+|+|||+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 34699999999999999999999999999999998643
No 265
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.42 E-value=0.0022 Score=72.42 Aligned_cols=37 Identities=16% Similarity=0.308 Sum_probs=34.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~-Gi~v~lvEr~~~~ 78 (712)
.++||+|||+|++|+++|..|++. |.+|+|||+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 569999999999999999999998 9999999998654
No 266
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.41 E-value=0.0084 Score=66.10 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=32.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.-.|+|||||++|+-+|..|++.|.+|+|+++.+..
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 357999999999999999999999999999987643
No 267
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.39 E-value=0.018 Score=64.51 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
-+|+|||||++|+-+|..|++.|.+|+++++.+.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 5799999999999999999999999999998764
No 268
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.21 E-value=0.013 Score=64.06 Aligned_cols=34 Identities=29% Similarity=0.403 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDK 181 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSC
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecc
Confidence 4799999999999999999999999999998764
No 269
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.08 E-value=0.0022 Score=72.51 Aligned_cols=36 Identities=31% Similarity=0.352 Sum_probs=32.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHh-CCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar-~Gi~v~lvEr~~~~ 78 (712)
++|+||||||++|+++|..|++ .|++|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 69999999997644
No 270
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.82 E-value=0.0056 Score=68.86 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=41.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHH
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFR 96 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr 96 (712)
.-+|+|||+|.+|+-+|..|++.|.+|+|++|.+.........-+.+...+.|+
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~ 231 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIK 231 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHH
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHH
Confidence 357999999999999999999999999999999873111112345666666666
No 271
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.81 E-value=0.0079 Score=68.44 Aligned_cols=38 Identities=11% Similarity=0.300 Sum_probs=35.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~ 79 (712)
+++||+|||+|..|..+|..|++.|.+|++|||++...
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~g 44 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYG 44 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCccc
Confidence 36999999999999999999999999999999998764
No 272
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.71 E-value=0.082 Score=58.05 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=31.6
Q ss_pred ccCEEEECCCHHHHHHHHHHH--------------------hCCC-CEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLT--------------------KLGI-KCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~La--------------------r~Gi-~v~lvEr~~~~ 78 (712)
.-+|+|||+|.+|+-+|..|+ +.|+ +|+|++|+...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 357999999999999999999 6798 69999998743
No 273
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.68 E-value=0.015 Score=65.53 Aligned_cols=55 Identities=13% Similarity=0.173 Sum_probs=41.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHh
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRK 97 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~ 97 (712)
.-+|+|||+|.+|+-+|..|++.+.+|+|++|.+.........-+.+..++.|+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~ 239 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRN 239 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHHHH
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHHHh
Confidence 4579999999999999999999999999999998631111123355666666653
No 274
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=95.51 E-value=0.034 Score=64.51 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=31.1
Q ss_pred cCEEEEC--CCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVG--AGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVG--aGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
-+|+||| +|.+|+-+|..|++.|.+|+++++.+.
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 4599999 999999999999999999999998764
No 275
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.43 E-value=0.013 Score=62.96 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=33.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~ 79 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 3589999999999999999999999999999998653
No 276
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.41 E-value=0.011 Score=54.55 Aligned_cols=35 Identities=26% Similarity=0.429 Sum_probs=32.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
...|+|+|+|..|+.+|..|.+.|++|+++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36799999999999999999999999999998764
No 277
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.34 E-value=0.017 Score=52.33 Aligned_cols=36 Identities=31% Similarity=0.380 Sum_probs=32.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.+-.|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 346899999999999999999999999999999753
No 278
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.29 E-value=0.019 Score=52.69 Aligned_cols=35 Identities=11% Similarity=0.180 Sum_probs=32.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.+..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34679999999999999999999999999999974
No 279
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.20 E-value=0.092 Score=57.58 Aligned_cols=36 Identities=19% Similarity=0.392 Sum_probs=30.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC--------------------CC-CEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKL--------------------GI-KCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~--------------------Gi-~v~lvEr~~~~ 78 (712)
.-+|+|||+|.+|+-+|..|++. |. +|+|++|+...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 35799999999999999999974 65 89999988643
No 280
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.10 E-value=0.017 Score=51.66 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=30.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 281
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.83 E-value=0.022 Score=51.35 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=31.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..|+|+|+|..|..+|..|.++|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 282
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=94.76 E-value=0.055 Score=54.91 Aligned_cols=33 Identities=12% Similarity=0.324 Sum_probs=29.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..+|+|||+|++|+-+|..|++.| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 358999999999999999999999 999998765
No 283
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=94.74 E-value=0.072 Score=64.12 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=31.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
-+|+|||+|+.|+-+|..|++.|.+|+|||+.+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~ 318 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSS 318 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc
Confidence 5799999999999999999999999999998764
No 284
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.66 E-value=0.023 Score=49.04 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=30.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~G-i~v~lvEr~~ 76 (712)
..|+|+|+|..|..++..|.++| .++++++|++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 57999999999999999999999 8999999864
No 285
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.36 E-value=0.029 Score=57.86 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=32.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+..
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 47999999999999999999999999999998754
No 286
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.30 E-value=0.19 Score=60.95 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=30.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
-+|+|||||.+|+-+|..|.+.|. +|+|++|++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999997 899999876
No 287
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.26 E-value=0.037 Score=49.58 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=30.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..|+|+|+|..|..+|..|.+.|++|+++++++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 288
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=94.25 E-value=0.11 Score=60.40 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=31.1
Q ss_pred cCEEEEC--CCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVG--AGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVG--aGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
-+|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799998 99999999999999999999999876
No 289
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.15 E-value=0.044 Score=51.85 Aligned_cols=34 Identities=26% Similarity=0.219 Sum_probs=31.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~-Gi~v~lvEr~~ 76 (712)
..+|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 46899999999999999999999 99999999865
No 290
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=94.08 E-value=0.24 Score=53.81 Aligned_cols=44 Identities=11% Similarity=-0.031 Sum_probs=29.0
Q ss_pred eEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCC
Q 005134 190 EILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGA 235 (712)
Q Consensus 190 ~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~ 235 (712)
++++++++++++. +++++.....++.+.+..++.+|+||.|-|.
T Consensus 224 ~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 224 EAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp EEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred EEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 9999999999864 4554443322221112357999999999874
No 291
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.99 E-value=0.044 Score=56.52 Aligned_cols=33 Identities=15% Similarity=0.356 Sum_probs=30.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.+|.|||+|..|..+|..|+++|++|+++++++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 292
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=93.91 E-value=0.15 Score=58.92 Aligned_cols=29 Identities=28% Similarity=0.407 Sum_probs=25.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEE
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSV 71 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~l 71 (712)
.-+|+|||||++|+-+|..|++.|.++++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 35899999999999999999999976643
No 293
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.79 E-value=0.039 Score=53.93 Aligned_cols=34 Identities=15% Similarity=0.306 Sum_probs=31.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
++|+|||+|..|..+|..|.++|++|+++|+++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3699999999999999999999999999998753
No 294
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.49 E-value=0.061 Score=56.29 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=32.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
...++|.|||||-.|.++|..|++.|+ +++++|+..
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 345689999999999999999999998 999999875
No 295
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=93.33 E-value=0.058 Score=55.38 Aligned_cols=35 Identities=31% Similarity=0.549 Sum_probs=32.2
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.+|+|||||..|+-+|..|++.|.+|+|+||....
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 57999999999999999999999999999987653
No 296
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.03 E-value=0.082 Score=56.84 Aligned_cols=36 Identities=25% Similarity=0.411 Sum_probs=33.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~ 79 (712)
-+|+|||+|++|+-+|..|++.|.+|+++|+.+.+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM 178 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 579999999999999999999999999999987653
No 297
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.79 E-value=0.1 Score=55.16 Aligned_cols=36 Identities=28% Similarity=0.468 Sum_probs=32.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+..++|.|||+|-.|.++|..|++.|++|++++|++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 344789999999999999999999999999999864
No 298
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=92.66 E-value=0.091 Score=57.66 Aligned_cols=37 Identities=30% Similarity=0.472 Sum_probs=33.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~ 79 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+-
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 212 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF 212 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC
Confidence 3579999999999999999999999999999987553
No 299
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.43 E-value=0.1 Score=54.11 Aligned_cols=38 Identities=18% Similarity=0.278 Sum_probs=33.2
Q ss_pred CCCcccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 39 ~~~~~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
|.+...+|.|||+|..|.++|..|++.|+ +++++|+.+
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 33445689999999999999999999999 999999863
No 300
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.31 E-value=0.1 Score=54.24 Aligned_cols=33 Identities=30% Similarity=0.600 Sum_probs=30.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
++|+|||+|-.|.++|..|++.|.+|+++.|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 679999999999999999999999999999853
No 301
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.18 E-value=0.13 Score=53.91 Aligned_cols=32 Identities=38% Similarity=0.470 Sum_probs=30.2
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
++|.|||+|-.|.++|..|++.|.+|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 68999999999999999999999999999874
No 302
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.89 E-value=0.15 Score=49.89 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=31.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
....+|||||||.+|...+..|.+.|.+|+|++..
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 44578999999999999999999999999999864
No 303
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.68 E-value=0.15 Score=52.98 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=31.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~ 76 (712)
...+|.|||+|-+|.++|+.|+..|+ +++++|...
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34799999999999999999999998 899999874
No 304
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.59 E-value=0.14 Score=53.04 Aligned_cols=32 Identities=34% Similarity=0.564 Sum_probs=29.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
++|+|||+|-.|.++|..|++.|.+|+++.|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 57999999999999999999999999999985
No 305
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.50 E-value=0.12 Score=56.53 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=32.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
...+|+|||.|.+|+++|..|.++|++|.+.|++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34689999999999999999999999999999876
No 306
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.33 E-value=0.13 Score=56.02 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=32.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.+|+|||.|++|+++|..|+++|++|+++|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 57999999999999999999999999999988753
No 307
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.31 E-value=0.17 Score=51.40 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=31.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
+|.|||+|..|..+|..|++.|++|++++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999999764
No 308
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=91.26 E-value=0.17 Score=55.73 Aligned_cols=36 Identities=28% Similarity=0.420 Sum_probs=33.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+++.+.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 222 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKV 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcc
Confidence 357999999999999999999999999999998764
No 309
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.17 E-value=4.2 Score=44.48 Aligned_cols=49 Identities=10% Similarity=0.083 Sum_probs=35.4
Q ss_pred ceEEeCcEEEEEEEcCCe------EEEEEEeccCCceeeEEEEecEEEeccCCCchh
Q 005134 189 REILMGHECVSVSATDQC------INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (712)
Q Consensus 189 ~~v~~g~~v~~v~~~~~~------v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (712)
.+|+++++|++|+.++++ +.|++.. .+|+. ..+++||.||.|-......
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~-~~g~~-~~~~~ad~VI~a~p~~~l~ 310 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISAS-PHKRQ-SEEESFDAVIMTAPLCDVK 310 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBC-SSSSC-BCCCEESEEEECSCHHHHH
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcC-CCCcc-ceeEECCEEEECCCHHHHH
Confidence 389999999999988877 6676642 23310 0367899999998876543
No 310
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.06 E-value=0.16 Score=54.79 Aligned_cols=35 Identities=31% Similarity=0.480 Sum_probs=32.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
+..|+|||.|..|..+|..|.++|++|++||+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999998864
No 311
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.00 E-value=0.19 Score=51.18 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=31.1
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.+|.|||+|..|...|..|+++|++|+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 579999999999999999999999999999875
No 312
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.99 E-value=0.068 Score=58.67 Aligned_cols=34 Identities=26% Similarity=0.426 Sum_probs=32.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
++|+|+|+|-+|..+|..|...|++|+|||+++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 6799999999999999999999999999999864
No 313
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.88 E-value=0.18 Score=53.83 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=32.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..+|+|+|+|++|+.+|..|...|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998864
No 314
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.86 E-value=0.18 Score=51.81 Aligned_cols=33 Identities=27% Similarity=0.500 Sum_probs=30.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
++|.|||+|-.|..+|..|++.|++|++++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999764
No 315
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.81 E-value=0.17 Score=52.50 Aligned_cols=34 Identities=29% Similarity=0.465 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.+|.|||+|..|...|..|+++|++|+++++++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5799999999999999999999999999998754
No 316
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.80 E-value=0.16 Score=52.05 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=31.2
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
++|+|||+|-.|.++|..|++.|.+|+++.|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999999874
No 317
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.80 E-value=0.22 Score=48.22 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=32.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..+|.|||+|-.|.++|..|++.|.+|++++|.+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46799999999999999999999999999998865
No 318
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.75 E-value=0.18 Score=55.08 Aligned_cols=34 Identities=26% Similarity=0.564 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
++|.|||+|-.|+.+|..|++.|++|+++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 5799999999999999999999999999998753
No 319
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.71 E-value=0.24 Score=51.20 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=32.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..+|.|||+|-.|..+|..|.+.|++|++++|++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 320
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.67 E-value=0.18 Score=55.48 Aligned_cols=35 Identities=29% Similarity=0.528 Sum_probs=32.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..++|.|||+|-.|+.+|..|++.|++|+++++++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34789999999999999999999999999999875
No 321
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.60 E-value=0.19 Score=51.95 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=30.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~ 76 (712)
++|+|||+|-+|.++|..|++.|+ +|+++++..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999999999 999999864
No 322
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=90.59 E-value=2.9 Score=45.75 Aligned_cols=44 Identities=9% Similarity=0.180 Sum_probs=34.6
Q ss_pred eEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCC
Q 005134 190 EILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (712)
Q Consensus 190 ~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (712)
+|+++++|++|+.++++|+|++. +|+....+++||+||.|=+..
T Consensus 254 ~i~~~~~V~~I~~~~~~v~v~~~---~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 254 KVHFNAQVIKIQQNDQKVTVVYE---TLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp GEESSCEEEEEEECSSCEEEEEE---CSSSCCCEEEESEEEECSCHH
T ss_pred ccccCCEEEEEEECCCeEEEEEe---cCCcccceEEeCEEEECCChH
Confidence 79999999999999889887765 332112358999999999875
No 323
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.55 E-value=0.19 Score=52.26 Aligned_cols=35 Identities=34% Similarity=0.492 Sum_probs=31.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~ 75 (712)
....+|.|||+|.+|.++|..|+..|+ +++++|..
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 344689999999999999999999998 89999974
No 324
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=90.52 E-value=0.2 Score=52.65 Aligned_cols=34 Identities=15% Similarity=0.196 Sum_probs=31.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.++|.|||+|-.|..+|..|++.|++|++++|++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999998764
No 325
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.49 E-value=0.21 Score=51.42 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=31.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..+|.|||.|-.|..+|..|++.|++|++++|.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999865
No 326
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.40 E-value=0.23 Score=51.82 Aligned_cols=33 Identities=21% Similarity=0.465 Sum_probs=31.1
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
.+|.|||||-.|.++|..|++.|+ +|+++|++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999999 999999875
No 327
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=90.31 E-value=0.21 Score=54.87 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=33.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~ 79 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+...
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 216 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL 216 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Confidence 3579999999999999999999999999999987653
No 328
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.30 E-value=0.24 Score=51.57 Aligned_cols=36 Identities=17% Similarity=0.282 Sum_probs=32.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~~ 77 (712)
...+|.|||+|-+|.++|..|+..|+ +++++|..+.
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 34689999999999999999999999 9999998763
No 329
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.07 E-value=0.16 Score=52.35 Aligned_cols=31 Identities=23% Similarity=0.441 Sum_probs=29.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhC-----C-CCEEEEcC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL-----G-IKCSVLEK 74 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~-----G-i~v~lvEr 74 (712)
++|.|||+|..|.++|..|++. | .+|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5799999999999999999999 9 99999987
No 330
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.04 E-value=0.26 Score=51.16 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=31.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
..+|.|||+|.+|.++|..|+..|+ ++.++|..+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999998 999999876
No 331
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=90.04 E-value=0.86 Score=49.15 Aligned_cols=52 Identities=10% Similarity=0.157 Sum_probs=35.8
Q ss_pred HHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCC
Q 005134 159 KLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (712)
Q Consensus 159 ~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (712)
..|.+.+++.|+ ++++++++++++. +++ ++...+ ++ ..++.+|+||.|-|..
T Consensus 204 ~~l~~~l~~~GV-------------------~i~~~~~v~~v~~--~~v--~~~~~~-~~--g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 204 RLVEDLFAERNI-------------------DWIANVAVKAIEP--DKV--IYEDLN-GN--THEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHTTC-------------------EEECSCEEEEECS--SEE--EEECTT-SC--EEEEECSEEEEECEEE
T ss_pred HHHHHHHHHCCC-------------------EEEeCCEEEEEeC--CeE--EEEecC-CC--ceEEeeeEEEECCCCc
Confidence 445566677776 9999999999864 343 444222 22 3579999999998854
No 332
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.99 E-value=0.23 Score=51.48 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=31.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..+|.|||||.-|..-|..++.+|++|+|+|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999765
No 333
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.98 E-value=0.21 Score=51.17 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=33.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..+|.|||.|-.|..+|..|+++|++|++++|++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEA 50 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 468999999999999999999999999999998753
No 334
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=89.89 E-value=0.21 Score=55.20 Aligned_cols=103 Identities=19% Similarity=0.342 Sum_probs=77.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+..... +.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d---------------------------------- 238 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-----MD---------------------------------- 238 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-----SC----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-----CC----------------------------------
Confidence 357999999999999999999999999999988743110 00
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+.+.|.+.+++.|+ +++.++++++++.
T Consensus 239 --------------------------------~~~~~~l~~~l~~~gV-------------------~v~~~~~v~~i~~ 267 (491)
T 3urh_A 239 --------------------------------GEVAKQLQRMLTKQGI-------------------DFKLGAKVTGAVK 267 (491)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHhCCC-------------------EEEECCeEEEEEE
Confidence 1122334555566676 9999999999999
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCc
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (712)
+++++.+++.+.++|+ ..++.+|.||.|-|...
T Consensus 268 ~~~~~~v~~~~~~~g~--~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 268 SGDGAKVTFEPVKGGE--ATTLDAEVVLIATGRKP 300 (491)
T ss_dssp ETTEEEEEEEETTSCC--CEEEEESEEEECCCCEE
T ss_pred eCCEEEEEEEecCCCc--eEEEEcCEEEEeeCCcc
Confidence 8888888776433342 35789999999999654
No 335
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.84 E-value=0.25 Score=51.23 Aligned_cols=33 Identities=12% Similarity=0.371 Sum_probs=31.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
.+|.|||+|-.|.++|..|++.|+ +|+++|+.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 579999999999999999999999 999999875
No 336
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=89.81 E-value=0.22 Score=54.58 Aligned_cols=34 Identities=24% Similarity=0.131 Sum_probs=32.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
-+|+|||||.+|+=+|..|++.|.+|+|+++++.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 5799999999999999999999999999998865
No 337
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.79 E-value=0.23 Score=49.65 Aligned_cols=35 Identities=31% Similarity=0.454 Sum_probs=31.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
...+|+|||+|-.|..+|..|++.|+ +++|+|+..
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 35789999999999999999999999 789999875
No 338
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.79 E-value=0.25 Score=50.91 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=29.9
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~ 76 (712)
+|.|||||-+|.++|..|+..|+ +++++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999999 999999863
No 339
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.75 E-value=0.16 Score=51.33 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=31.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
....|||||||.+|+..+..|.+.|.+|+||+...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45789999999999999999999999999998643
No 340
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.71 E-value=0.31 Score=48.94 Aligned_cols=34 Identities=24% Similarity=0.511 Sum_probs=30.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~-v~lvEr~~ 76 (712)
.++|.|||+|-.|..+|..|++.|++ |.+++|.+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 46899999999999999999999999 88998764
No 341
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.68 E-value=0.2 Score=53.03 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=32.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..+|+|+|+|.+|+.+|..|...|.+|+++++++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998853
No 342
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.47 E-value=0.31 Score=50.69 Aligned_cols=33 Identities=21% Similarity=0.494 Sum_probs=30.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
.+|.|||||-+|.++|..|+..|+ +++++|...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 589999999999999999999998 999999874
No 343
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.39 E-value=0.29 Score=53.29 Aligned_cols=36 Identities=19% Similarity=0.002 Sum_probs=32.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~-v~lvEr~~~~ 78 (712)
.-+|+|||||++|+=+|..|++.|.+ |+|++|.+..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 35799999999999999999999999 9999998643
No 344
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.31 E-value=0.27 Score=53.97 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=32.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhC-CC-CEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL-GI-KCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~-Gi-~v~lvEr~~~ 77 (712)
++|.|||+|-.|+.+|..|+++ |+ +|+++++++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5799999999999999999999 99 9999999976
No 345
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.31 E-value=0.11 Score=46.86 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=31.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
...|+|||+|..|..+|..|.+.|+++++++|.+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3679999999999999999999999999999875
No 346
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=89.29 E-value=0.26 Score=55.28 Aligned_cols=54 Identities=11% Similarity=0.154 Sum_probs=40.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHH
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFR 96 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr 96 (712)
.-+|+|||+|.+|+-+|..|++.|.+|+||+|.+.......-.-+++...+.|+
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~ 244 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQK 244 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHH
Confidence 468999999999999999999999999999999863111112335666666666
No 347
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.24 E-value=0.21 Score=48.70 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=31.2
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEE-EcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSV-LEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~l-vEr~~~ 77 (712)
++|.|||+|-.|.++|..|.+.|++|++ ++|++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 6899999999999999999999999999 887654
No 348
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.24 E-value=0.33 Score=50.23 Aligned_cols=35 Identities=31% Similarity=0.373 Sum_probs=31.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~ 76 (712)
+..+|.|||.|..|.++|..|.+.|+ +|+++++++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 34689999999999999999999999 899999765
No 349
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.18 E-value=0.27 Score=51.18 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=31.2
Q ss_pred cCEEEECCCHHHHH-HHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLV-LSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~-~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.+|.|||.|.+|++ +|..|.++|++|.+.|++..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 57999999999996 89999999999999999864
No 350
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=89.17 E-value=0.27 Score=53.12 Aligned_cols=35 Identities=26% Similarity=0.418 Sum_probs=31.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..++|.|||+|-.|+.+|..|++ |++|+++++.+.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 33689999999999999999998 999999998753
No 351
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=89.16 E-value=0.5 Score=52.56 Aligned_cols=36 Identities=14% Similarity=0.336 Sum_probs=33.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~ 79 (712)
-+|+|||||..|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc
Confidence 679999999999999999999999999999987653
No 352
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=89.15 E-value=0.31 Score=53.03 Aligned_cols=37 Identities=24% Similarity=0.450 Sum_probs=33.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..+.+.|||.|-.|+.+|..|++.|++|+++++++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 3478999999999999999999999999999998764
No 353
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.10 E-value=0.3 Score=52.07 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=32.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
...|+|+|+|++|+.++..|...|.+|+++++++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998764
No 354
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=89.02 E-value=0.27 Score=51.01 Aligned_cols=35 Identities=23% Similarity=0.404 Sum_probs=32.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..+|.|||.|-.|..+|..|++.|++|++++|.+.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 46899999999999999999999999999998753
No 355
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.99 E-value=0.3 Score=50.37 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=31.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
++|.|||.|-.|..+|..|++.|++|++++|.+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999998764
No 356
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.98 E-value=0.33 Score=50.08 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
.+|.|||||-+|..+|..|+..|+ ++.++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 579999999999999999999997 999999864
No 357
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=88.96 E-value=0.49 Score=51.50 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=32.1
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.+|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5799999999999999999999999999999875
No 358
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=88.95 E-value=0.31 Score=50.29 Aligned_cols=32 Identities=28% Similarity=0.529 Sum_probs=29.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
++|+|||+|-.|.++|..|+ .|.+|+++.|.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 67999999999999999999 999999999864
No 359
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.92 E-value=0.37 Score=53.01 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=31.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999875
No 360
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.87 E-value=0.29 Score=52.59 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=32.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
...|+|+|+|.+|+.+|..|...|.+|+++++++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998753
No 361
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.86 E-value=0.34 Score=50.04 Aligned_cols=34 Identities=12% Similarity=0.218 Sum_probs=31.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
.++|.|||.|-.|..+|..|++.|+ +|++++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 3689999999999999999999999 999999875
No 362
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=88.86 E-value=0.4 Score=46.59 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=30.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.+|.|||+|-.|..+|..|.+.|++|.+++|++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 363
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=88.83 E-value=0.5 Score=48.64 Aligned_cols=34 Identities=21% Similarity=0.491 Sum_probs=31.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..+|.|||.|-.|..+|..|.+.|++|++++|.+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 364
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=88.72 E-value=0.11 Score=51.13 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=30.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr 74 (712)
..++|.|||+|..|.++|..|+++|++|+++++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 446899999999999999999999999999988
No 365
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.66 E-value=0.31 Score=50.49 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=30.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~ 75 (712)
..++|.|||||-+|.++|..|+..|+ ++.++|..
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 45799999999999999999999986 78899865
No 366
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=88.66 E-value=0.35 Score=49.90 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=29.5
Q ss_pred CEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~ 76 (712)
+|.|||+|-+|.++|..|++. |.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999985 78999999975
No 367
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.45 E-value=0.32 Score=51.46 Aligned_cols=33 Identities=27% Similarity=0.439 Sum_probs=30.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..|+|+|+|.+|+.++..|+..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 679999999999999999999999999999864
No 368
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=88.40 E-value=0.4 Score=51.91 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=30.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..|.|||.|-+||.+|..|+++|++|+.||.++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 579999999999999999999999999999764
No 369
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=88.26 E-value=0.29 Score=53.15 Aligned_cols=32 Identities=25% Similarity=0.273 Sum_probs=30.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+|.|||+|-+|+.+|..|++.|++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999875
No 370
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.19 E-value=0.32 Score=49.71 Aligned_cols=33 Identities=30% Similarity=0.363 Sum_probs=30.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
++|.|||+|..|..+|..|.+.|++|.++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999764
No 371
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.06 E-value=0.38 Score=49.83 Aligned_cols=34 Identities=26% Similarity=0.404 Sum_probs=29.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
...+|.|||+|-.|.++|..|++.|.+|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3468999999999999999999999999999 653
No 372
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=87.90 E-value=0.52 Score=47.53 Aligned_cols=35 Identities=31% Similarity=0.434 Sum_probs=32.1
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..|+|.|+|..|..++..|.++|++|+++.|+...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 57999999999999999999999999999998643
No 373
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=87.83 E-value=0.32 Score=53.90 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=30.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--------------CCCEEEEcCCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL--------------GIKCSVLEKNKAFS 79 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~--------------Gi~v~lvEr~~~~~ 79 (712)
..|+||||||+|+=+|..|+.. .++|+|+|+.+...
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc
Confidence 3699999999999999998754 37899999998753
No 374
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.68 E-value=0.19 Score=49.48 Aligned_cols=34 Identities=18% Similarity=0.069 Sum_probs=30.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
+..|+|+|+|..|..+|..|.++|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 4579999999999999999999999 999998764
No 375
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.65 E-value=0.38 Score=49.29 Aligned_cols=33 Identities=18% Similarity=0.147 Sum_probs=30.1
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~ 76 (712)
++|.|||+|.+|.++|..|++.|+ ++.++|+.+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 369999999999999999999998 899999764
No 376
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.57 E-value=0.4 Score=48.79 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
++|.|||.|-.|..+|..|++.|++|++++|++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4699999999999999999999999999998764
No 377
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=87.50 E-value=0.49 Score=53.20 Aligned_cols=36 Identities=14% Similarity=0.372 Sum_probs=33.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~ 79 (712)
..|+|||+|..|..+|..|.+.|++|+++|+++...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~ 384 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPV 384 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHH
Confidence 689999999999999999999999999999998753
No 378
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=87.46 E-value=0.42 Score=49.39 Aligned_cols=33 Identities=18% Similarity=0.442 Sum_probs=30.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~ 76 (712)
++|.|||+|.+|.++|..|++.|+ +++++|..+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 469999999999999999999998 899999876
No 379
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=87.45 E-value=0.59 Score=48.55 Aligned_cols=34 Identities=15% Similarity=0.292 Sum_probs=30.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~ 76 (712)
..+|.|||+|.+|.++|..|+..|+ +++++|...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4689999999999999999999998 899999743
No 380
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=87.45 E-value=0.37 Score=49.29 Aligned_cols=39 Identities=18% Similarity=0.321 Sum_probs=31.2
Q ss_pred cCCCCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 37 IVSNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 37 ~~~~~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+.....+.+|.|||+|.-|...|..|+ +|++|+++|+.+
T Consensus 6 ~~~~~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 6 IHHHHHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred cccccCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 334456689999999999999999999 999999999875
No 381
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.34 E-value=0.5 Score=47.16 Aligned_cols=36 Identities=14% Similarity=0.114 Sum_probs=32.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCC----CCEEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLG----IKCSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~G----i~v~lvEr~~~~ 78 (712)
.++|.|||+|-.|.++|..|.+.| .+|.+++|++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~ 43 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN 43 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc
Confidence 357999999999999999999999 699999998754
No 382
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=87.26 E-value=0.46 Score=49.52 Aligned_cols=36 Identities=22% Similarity=0.410 Sum_probs=31.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.++.+|.|||+|-.|.++|..|++.|.+|++++|.+
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 345889999999999999999999999999999864
No 383
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.22 E-value=0.75 Score=47.09 Aligned_cols=34 Identities=26% Similarity=0.438 Sum_probs=31.3
Q ss_pred cCEEEEC-CCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVG-AGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVG-aGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.+|.||| +|-.|.++|..|++.|++|+++++.+.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 4799999 999999999999999999999998753
No 384
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=87.07 E-value=0.48 Score=46.97 Aligned_cols=37 Identities=19% Similarity=0.353 Sum_probs=32.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
....+|.|||+|-.|.++|..|++.|++|++++|++.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 3457899999999999999999999999999998764
No 385
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=86.95 E-value=0.56 Score=51.23 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=32.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKAF 78 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~-v~lvEr~~~~ 78 (712)
.-+|+|||||.+|+-+|..|.+.|.+ |+|++|++..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 35799999999999999999999985 9999988753
No 386
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.86 E-value=0.48 Score=49.24 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=31.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~ 75 (712)
....+|.|||+|.+|.++|..|+..|+ ++.|+|..
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 344789999999999999999999998 89999974
No 387
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=86.78 E-value=0.34 Score=51.23 Aligned_cols=32 Identities=25% Similarity=0.461 Sum_probs=30.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+|.|||+|-.|.++|..|++.|++|++++|.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 388
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.67 E-value=0.43 Score=49.48 Aligned_cols=30 Identities=33% Similarity=0.463 Sum_probs=28.9
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr 74 (712)
+|.|||+|-.|.++|..|++.|++|++++|
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 389
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=86.66 E-value=0.69 Score=48.41 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=31.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..+|.|||.|..|.++|..|.+.|++|+++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999865
No 390
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.61 E-value=0.47 Score=50.28 Aligned_cols=34 Identities=26% Similarity=0.502 Sum_probs=31.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
...|+|+|+|.+|+.+|..|+..|.+|+++++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3679999999999999999999999999998764
No 391
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=86.42 E-value=0.28 Score=50.87 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=31.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~G-i~v~lvEr~~~ 77 (712)
++|.|||.|-.|..+|..|++.| ++|+++++.+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 57999999999999999999999 99999999864
No 392
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=86.39 E-value=5.4 Score=35.37 Aligned_cols=144 Identities=8% Similarity=0.025 Sum_probs=73.3
Q ss_pred CCCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEcCCccchHHHH----HHHHhhhhcC-CceEEEEEcCCCCcchhh
Q 005134 553 NPGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIAPVEESYHLAR----AALKVAEDFK-VPTKVCVLWPAGTTNEVE 627 (712)
Q Consensus 553 ~pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~~~~~~~~~~~----aa~~~~~~~g-~~~~~~~~~~~~~~~~~~ 627 (712)
.+|..+|.+-+...+|+.+++-++-|. .+||.+-. ..+..+. ...++.+... ..+.++.|..+..+.+.-
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~~gk----~vll~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~ 77 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGEVVKLSDLKGQ----VVIVNFWA-TWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAV 77 (154)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGGTTS----EEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHH
T ss_pred CCCCCCCCeEEEcCCCCEEehhhcCCC----EEEEEEEC-CCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHH
Confidence 589999999998767777888887442 56665532 1122222 2333444443 356777773332100000
Q ss_pred hhh-ccccCCCCcccchhhhcccCCccchhhhhcccCCc-eEEEcCCceEEEeeCCCCCCChHHHHHHHHHHhhCCCCCC
Q 005134 628 FRS-AAELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMG-AILVRPDDHIAWRSKSGVSGNPKLEMEMAFSAVLGIKPVN 705 (712)
Q Consensus 628 ~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g-avLVRPDg~VaWr~~~~~~~~~~~~l~~~~~~~~~~~~~~ 705 (712)
..- ..-.-+|..+.|. .....+.+++..-- .+||-+||.|.++..+..+.+ ..++.+.|+.++...+.+
T Consensus 78 ~~~~~~~~~~~~~~~d~--------~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~-~~~l~~~l~~l~~~~~~~ 148 (154)
T 3kcm_A 78 EEFFRKTGFTLPVLLDA--------DKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWD-HPEVIAFLNNELSKAREG 148 (154)
T ss_dssp HHHHHHHCCCCCEEECT--------TCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTT-SHHHHHHHHTC-------
T ss_pred HHHHHHcCCCeeEEecC--------chHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccc-cHHHHHHHHHHHHHhhhc
Confidence 000 0001123222331 13455667777665 889999999998876442223 357889999988777666
Q ss_pred CcccC
Q 005134 706 VEGTT 710 (712)
Q Consensus 706 ~~~~~ 710 (712)
-++++
T Consensus 149 ~~~~~ 153 (154)
T 3kcm_A 149 HHHHH 153 (154)
T ss_dssp -----
T ss_pred ccccC
Confidence 55543
No 393
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=86.37 E-value=0.54 Score=51.46 Aligned_cols=34 Identities=24% Similarity=0.467 Sum_probs=31.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4699999999999999999999999999998753
No 394
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=86.27 E-value=0.55 Score=51.65 Aligned_cols=99 Identities=22% Similarity=0.445 Sum_probs=75.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeee
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~ 122 (712)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.... .+ .
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~----------------~~---~-------------------- 231 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR----------------NF---D-------------------- 231 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------TS---C--------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc----------------cc---C--------------------
Confidence 46899999999999999999999999999998764310 00 0
Q ss_pred cCCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEE
Q 005134 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (712)
Q Consensus 123 ~~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~ 202 (712)
..+...|.+.+++.|+ ++++++++++++.
T Consensus 232 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~V~~i~~ 260 (484)
T 3o0h_A 232 --------------------------------YDLRQLLNDAMVAKGI-------------------SIIYEATVSQVQS 260 (484)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTC-------------------EEESSCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEe
Confidence 1122345555666676 9999999999999
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEeccCCCch
Q 005134 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (712)
Q Consensus 203 ~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (712)
+++++.+++. +|+ ++.+|.||.|.|..+.
T Consensus 261 ~~~~v~v~~~---~g~----~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 261 TENCYNVVLT---NGQ----TICADRVMLATGRVPN 289 (484)
T ss_dssp CSSSEEEEET---TSC----EEEESEEEECCCEEEC
T ss_pred eCCEEEEEEC---CCc----EEEcCEEEEeeCCCcC
Confidence 8888765543 453 6899999999997654
No 395
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=86.07 E-value=0.54 Score=48.34 Aligned_cols=33 Identities=21% Similarity=0.533 Sum_probs=30.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~ 76 (712)
.+|.|||||-+|..+|..|+..|+ +++|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 689999999999999999999998 999999875
No 396
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.06 E-value=0.59 Score=49.27 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=31.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..++|.|||.|-.|..+|..|++.|++|++++|.+
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34689999999999999999999999999999875
No 397
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.05 E-value=0.45 Score=47.94 Aligned_cols=33 Identities=27% Similarity=0.234 Sum_probs=30.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
++|+|.|||..|..++..|.++|++|+++.|++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 579999999999999999999999999998865
No 398
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=86.03 E-value=0.8 Score=48.58 Aligned_cols=36 Identities=25% Similarity=0.426 Sum_probs=32.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
....|+|+|+|..|..++..+++.|++|++++..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 346799999999999999999999999999987654
No 399
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=86.02 E-value=0.51 Score=48.89 Aligned_cols=32 Identities=28% Similarity=0.420 Sum_probs=29.7
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~ 76 (712)
+|.|||+|-.|.++|..|++.|+ +++++|+.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 68999999999999999999999 999999863
No 400
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=86.02 E-value=0.72 Score=50.62 Aligned_cols=35 Identities=11% Similarity=0.284 Sum_probs=32.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..+|.|||.|-.|..+|..|+++|++|++++|.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998763
No 401
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.00 E-value=0.67 Score=48.03 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=31.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCC----CCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLG----IKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~G----i~v~lvEr~~~ 77 (712)
.++|.|||+|-.|.++|..|.+.| .+|++++|.+.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 457999999999999999999999 79999998753
No 402
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=86.00 E-value=0.47 Score=48.22 Aligned_cols=34 Identities=24% Similarity=0.353 Sum_probs=31.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.+|.|||.|-.|..+|..|++.|++|++++|++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3699999999999999999999999999998764
No 403
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=85.97 E-value=8.1 Score=44.09 Aligned_cols=49 Identities=20% Similarity=0.218 Sum_probs=36.8
Q ss_pred ccceEEeCcEEEEEEEcCCeEEEEEEeccCCceeeEEEEecEEEeccCCC
Q 005134 187 QGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (712)
Q Consensus 187 ~~~~v~~g~~v~~v~~~~~~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (712)
...+|+++++|++|+.++++|+|++.+..++. ...+++||+||.|=...
T Consensus 409 ~~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~-~~~~~~Ad~VI~tvP~~ 457 (662)
T 2z3y_A 409 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTS-QTFIYKCDAVLCTLPLG 457 (662)
T ss_dssp TTCEEETTEEEEEEEEETTEEEEEEEESSCTT-CEEEEEESEEEECCCHH
T ss_pred hcCceecCCeEEEEEECCCcEEEEEeecccCC-CCeEEEeCEEEECCCHH
Confidence 34589999999999999999988876421111 12479999999987644
No 404
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=85.94 E-value=0.61 Score=48.24 Aligned_cols=33 Identities=30% Similarity=0.493 Sum_probs=29.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~ 75 (712)
..+|.|||+|.+|.++|+.|+..|+ +++++|.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3689999999999999999999886 79999975
No 405
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=85.90 E-value=0.36 Score=50.65 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC-------CCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLG-------IKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~G-------i~v~lvEr~~~ 77 (712)
++|.|||+|-.|.++|..|++.| .+|++++|.+.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 57999999999999999999999 89999998865
No 406
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=85.85 E-value=0.66 Score=50.98 Aligned_cols=37 Identities=16% Similarity=0.330 Sum_probs=32.1
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 40 ~~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.|.+.+|.|||+|-.|..+|..|+++|++|.+++|.+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3567889999999999999999999999999999874
No 407
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=85.83 E-value=0.47 Score=50.96 Aligned_cols=31 Identities=26% Similarity=0.478 Sum_probs=29.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+|.|||+|-+|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999875
No 408
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=85.71 E-value=0.55 Score=51.62 Aligned_cols=100 Identities=22% Similarity=0.286 Sum_probs=72.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCceeecCHhHHHHHHhhhcHHHHHHhcCCCccccceeEeeec
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~~~~~ra~~i~~rtmeilr~l~Gl~d~l~~~~~~~~~~~~~~~~~~ 123 (712)
-+|+|||||++|+-+|..|++.|.+|+|+++..... .+.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~--------------------~~d--------------------- 226 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR--------------------GFD--------------------- 226 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST--------------------TSC---------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc--------------------ccC---------------------
Confidence 479999999999999999999999999999742110 000
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhHHHHHHHHHHHhcCceeeccCccccccccccccceEEeCcEEEEEEEc
Q 005134 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (712)
Q Consensus 124 ~~G~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~v~~~ 203 (712)
..+.+.|.+.+++.|+ ++++++++++++.+
T Consensus 227 -------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~~ 256 (483)
T 3dgh_A 227 -------------------------------QQMAELVAASMEERGI-------------------PFLRKTVPLSVEKQ 256 (483)
T ss_dssp -------------------------------HHHHHHHHHHHHHTTC-------------------CEEETEEEEEEEEC
T ss_pred -------------------------------HHHHHHHHHHHHhCCC-------------------EEEeCCEEEEEEEc
Confidence 0122344555666676 89999999999886
Q ss_pred CC-eEEEEEEeccCCceeeEEEEecEEEeccCCC
Q 005134 204 DQ-CINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (712)
Q Consensus 204 ~~-~v~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (712)
++ .+.+++.+..++ +..++.+|.||.|-|..
T Consensus 257 ~~~~~~v~~~~~~~~--~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 257 DDGKLLVKYKNVETG--EESEDVYDTVLWAIGRK 288 (483)
T ss_dssp TTSCEEEEEEETTTC--CEEEEEESEEEECSCEE
T ss_pred CCCcEEEEEecCCCC--ceeEEEcCEEEECcccc
Confidence 55 466666643223 24578999999999965
No 409
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=85.69 E-value=0.55 Score=45.88 Aligned_cols=36 Identities=31% Similarity=0.344 Sum_probs=31.9
Q ss_pred cccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 42 AVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGa-GpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
....|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 3467999999 99999999999999999999998753
No 410
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.61 E-value=0.57 Score=49.81 Aligned_cols=35 Identities=26% Similarity=0.454 Sum_probs=31.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
....|+|+|+|.+|+.+|..|+..|.+|+++++++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34679999999999999999999999999998763
No 411
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=85.61 E-value=0.63 Score=47.49 Aligned_cols=36 Identities=39% Similarity=0.531 Sum_probs=32.4
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
....+|+|||+|-.|..+|..|++.|+ +++|+|...
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 456899999999999999999999999 788898775
No 412
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=85.60 E-value=7.7 Score=34.19 Aligned_cols=139 Identities=12% Similarity=0.054 Sum_probs=72.8
Q ss_pred CCCCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEcCCccchHHH----HHHHHhhhhcCC-ceEEEEEcCCCCcchh
Q 005134 552 ANPGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIAPVEESYHLA----RAALKVAEDFKV-PTKVCVLWPAGTTNEV 626 (712)
Q Consensus 552 ~~pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~~~~~~~~~~----~aa~~~~~~~g~-~~~~~~~~~~~~~~~~ 626 (712)
-.+|..+|.+-|.. +++.+++-|+-|. .+||.+-. ..+..+ ....++.++..- .+.++.|..+... +
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~~gk----~vll~f~~-~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~-~- 74 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDKTGS----VVYLDFWA-SWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKT-G- 74 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGGTTS----EEEEEEEC-TTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSH-H-
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHhCCC----EEEEEEEC-CcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCH-H-
Confidence 35899999999987 7778888887553 56665432 112222 122333333321 2666666322111 0
Q ss_pred hhhhcc--ccCCCCcccchhhhcccCCccchhhhhcccCCc-eEEEcCCceEEEeeCCCCCCChHHHHHHHHHHhhCCCC
Q 005134 627 EFRSAA--ELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMG-AILVRPDDHIAWRSKSGVSGNPKLEMEMAFSAVLGIKP 703 (712)
Q Consensus 627 ~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g-avLVRPDg~VaWr~~~~~~~~~~~~l~~~~~~~~~~~~ 703 (712)
...... ....|..+.|. .....+.+++..-- .+||-|||-|.++..+..+ ....+|.+.|+..++..+
T Consensus 75 ~~~~~~~~~~~~~~~~~d~--------~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~-~~~~~l~~~i~~~~~~~~ 145 (152)
T 3gl3_A 75 DAMKFLAQVPAEFTVAFDP--------KGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRP-ADKEALEQQILAALGGNE 145 (152)
T ss_dssp HHHHHHHHSCCCSEEEECT--------TCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCT-TTHHHHHHHHHHHTC---
T ss_pred HHHHHHHHcCCCCceeECC--------cchhHHHcCCCCCCeEEEECCCCCEEEEEccCCC-cCHHHHHHHHHHHHcccc
Confidence 000000 00122222221 13455667776654 4899999999999875422 334679999999887765
Q ss_pred CCCc
Q 005134 704 VNVE 707 (712)
Q Consensus 704 ~~~~ 707 (712)
.+-.
T Consensus 146 ~~~~ 149 (152)
T 3gl3_A 146 GHHH 149 (152)
T ss_dssp ----
T ss_pred cccc
Confidence 5433
No 413
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=85.54 E-value=0.67 Score=46.73 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=29.6
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+|.|||+|-.|.++|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998764
No 414
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=85.51 E-value=0.75 Score=46.65 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.5
Q ss_pred cCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGa-GpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
++|.|||+ |-.|..+|..|.+.|++|++++|++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999764
No 415
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.26 E-value=0.64 Score=44.66 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=29.7
Q ss_pred CEEEEC-CCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 45 PVLIVG-AGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVG-aGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+|+||| +|-.|..+|..|.++|++|.+++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999998864
No 416
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=85.08 E-value=0.86 Score=46.18 Aligned_cols=34 Identities=15% Similarity=0.267 Sum_probs=31.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC---CEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGI---KCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi---~v~lvEr~~ 76 (712)
..+|.|||+|-.|.++|..|.+.|+ +|.+++|++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3679999999999999999999999 999999875
No 417
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=84.95 E-value=0.74 Score=44.12 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=29.9
Q ss_pred CEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 45 PVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGa-GpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999996 9999999999999999999999875
No 418
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=84.95 E-value=0.65 Score=49.11 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=32.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKN 75 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~ 75 (712)
..+.+|+|+|||-+|..+|..|...|. +++++|++
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 567899999999999999999999999 99999987
No 419
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=84.71 E-value=0.56 Score=51.63 Aligned_cols=34 Identities=32% Similarity=0.412 Sum_probs=30.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~ 77 (712)
++|.|||+|-+|+.+|..|+++ |++|+++++++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 5799999999999999999998 799999998753
No 420
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=84.51 E-value=0.8 Score=46.53 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=30.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+|.|||+|-.|..+|..|.+.|++|++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999865
No 421
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=84.49 E-value=0.79 Score=43.32 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=31.5
Q ss_pred cCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGa-GpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..|+|.|| |-.|..++..|.++|.+|+++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 56999999 99999999999999999999999764
No 422
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=84.49 E-value=0.94 Score=46.20 Aligned_cols=35 Identities=29% Similarity=0.379 Sum_probs=32.5
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGa-GpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
...|+|.|| |-.|..++..|.++|++|+++.|...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 467999999 99999999999999999999999875
No 423
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=84.33 E-value=0.95 Score=47.31 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=30.0
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCCC--CEEEEcCCC
Q 005134 43 VVPVLIVGA-GPVGLVLSILLTKLGI--KCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGa-GpaGL~~A~~Lar~Gi--~v~lvEr~~ 76 (712)
..+|.|||+ |-+|.++|..|...|+ +++++|...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 468999998 9999999999999996 899999753
No 424
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=84.20 E-value=0.58 Score=51.27 Aligned_cols=34 Identities=24% Similarity=0.422 Sum_probs=31.1
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~ 77 (712)
++|.|||+|-.|+.+|..|++. |++|+++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 5799999999999999999999 899999998753
No 425
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=84.10 E-value=2.9 Score=44.53 Aligned_cols=36 Identities=22% Similarity=0.143 Sum_probs=26.5
Q ss_pred CcEEEEccCCccCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 005134 359 NQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVL 397 (712)
Q Consensus 359 gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl 397 (712)
.+||.+||+++.-.|. -...+..++..+|..|...+
T Consensus 300 ~~vfa~GD~~~~~~~~---~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 300 DNVYAVGDANSMTVPK---LGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp TTEEECGGGBTTCCSC---CHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEeehhccCCCCc---HHHHHHHHHHHHHHHHHHHh
Confidence 6899999999863332 23567888888888887766
No 426
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=84.07 E-value=0.75 Score=50.24 Aligned_cols=34 Identities=29% Similarity=0.275 Sum_probs=31.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
....|||||||.+|...+..|.+.|.+|+|++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3468999999999999999999999999999964
No 427
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=84.00 E-value=0.94 Score=45.66 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=30.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
...|+|+|+|-+|.++|..|++.|.+|+|+.|..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999998764
No 428
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=83.98 E-value=0.89 Score=47.33 Aligned_cols=36 Identities=28% Similarity=0.485 Sum_probs=32.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~~ 77 (712)
...+|+|||+|-.|...|..|++.|+ +++|+|...-
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 45789999999999999999999999 6788988763
No 429
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=83.98 E-value=0.84 Score=49.84 Aligned_cols=34 Identities=26% Similarity=0.297 Sum_probs=30.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~ 75 (712)
....|+|+|+|..|..+|..|+..|.+|+++|++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3457999999999999999999999999999875
No 430
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=83.93 E-value=5 Score=36.38 Aligned_cols=133 Identities=11% Similarity=0.016 Sum_probs=71.2
Q ss_pred CCCCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEcCCccchHH----HHHHHHhhhhcCCceEEEEEcCCCCcchhh
Q 005134 552 ANPGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIAPVEESYHL----ARAALKVAEDFKVPTKVCVLWPAGTTNEVE 627 (712)
Q Consensus 552 ~~pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~~~~~~~~~----~~aa~~~~~~~g~~~~~~~~~~~~~~~~~~ 627 (712)
..+|..+|.+-|.+.+|+.+++-|+-|. .+||.+-....+.. .....++.++. -.+.++.|..+.. + .
T Consensus 18 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk----~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~--~-~ 89 (167)
T 2jsy_A 18 VKVGDQAPDFTVLTNSLEEKSLADMKGK----VTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLP--F-A 89 (167)
T ss_dssp CCTTSCCCCCEEEBTTCCEEEHHHHTTS----CEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSG--G-G
T ss_pred cCCCCcCCceEEECCCCCEeeHHHhCCC----eEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCH--H-H
Confidence 4689999999988767788898898663 56666532110111 22233445554 4567777733211 1 0
Q ss_pred hhhcccc-C--CCCcccchhhhcccCCccchhhhhcccC-------CceEEEcCCceEEEeeCCCCC-CC-hHHHHHHHH
Q 005134 628 FRSAAEL-A--PWKNYIDVEEVKRSSDSLSWWRICKMTD-------MGAILVRPDDHIAWRSKSGVS-GN-PKLEMEMAF 695 (712)
Q Consensus 628 ~~~~~~~-~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~-------~gavLVRPDg~VaWr~~~~~~-~~-~~~~l~~~~ 695 (712)
....... . .|.-+.|.. .....+.+++.. ...+||-|||.|.++..+... .. ..+++.+.|
T Consensus 90 ~~~~~~~~~~~~~~~~~d~~-------~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l 162 (167)
T 2jsy_A 90 QARWCGANGIDKVETLSDHR-------DMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAA 162 (167)
T ss_dssp TSCCGGGSSCTTEEEEEGGG-------TCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHH
T ss_pred HHHHHHhcCCCCceEeeCCc-------hhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHH
Confidence 0000000 0 122222200 135556677765 457999999999999753211 11 124566666
Q ss_pred HHhh
Q 005134 696 SAVL 699 (712)
Q Consensus 696 ~~~~ 699 (712)
++++
T Consensus 163 ~~ll 166 (167)
T 2jsy_A 163 KALV 166 (167)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 6654
No 431
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=83.89 E-value=0.98 Score=46.98 Aligned_cols=34 Identities=24% Similarity=0.233 Sum_probs=31.3
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGa-GpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
...|+|.|| |-.|..++..|.++|.+|.++.|.+
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 468999999 9999999999999999999999986
No 432
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=83.82 E-value=0.78 Score=48.43 Aligned_cols=35 Identities=23% Similarity=0.458 Sum_probs=32.4
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKN 75 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~ 75 (712)
..+.+|+|+|||-+|..+|..|...|. +++++||.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 567899999999999999999999999 79999987
No 433
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.80 E-value=0.86 Score=43.85 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=29.9
Q ss_pred CEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 45 PVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGa-GpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+|+|.|| |-.|..++..|.++|.+|+++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999999 9999999999999999999999874
No 434
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=83.79 E-value=0.85 Score=47.20 Aligned_cols=34 Identities=24% Similarity=0.442 Sum_probs=30.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~ 75 (712)
.+.+|.|||||-+|.++|+.|...++ ++.|+|..
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34799999999999999999999987 78889864
No 435
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=83.75 E-value=0.63 Score=48.43 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=29.8
Q ss_pred cccCEEEECC-CHHHHHHHHHHHhCCC-------CEEEEcCC
Q 005134 42 AVVPVLIVGA-GPVGLVLSILLTKLGI-------KCSVLEKN 75 (712)
Q Consensus 42 ~~~~VlIVGa-GpaGL~~A~~Lar~Gi-------~v~lvEr~ 75 (712)
..++|+|+|| |-+|.+++..|...|+ ++.++|+.
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 3468999998 9999999999999986 78888875
No 436
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=83.57 E-value=0.73 Score=47.09 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=30.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.+|.|||+|-.|..+|..|++.|++|++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999875
No 437
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=83.52 E-value=0.86 Score=46.06 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=29.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
++|.|||+|..|...|..|.+ |++|++++|++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 369999999999999999999 99999999864
No 438
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=83.51 E-value=0.81 Score=48.47 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC-------CCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLG-------IKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~G-------i~v~lvEr~~~ 77 (712)
.+|.|||+|-.|.++|..|++.| .+|++++|.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998765
No 439
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=83.49 E-value=0.81 Score=45.59 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=29.6
Q ss_pred CEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~G-i~v~lvEr~~ 76 (712)
+|.|||+|-.|..+|..|.+.| .+|.+++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999998764
No 440
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=83.48 E-value=0.84 Score=46.74 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=30.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
...|+|+|+|.+|.++|..|.+.|+ +++|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999998 899998874
No 441
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=83.43 E-value=0.78 Score=47.22 Aligned_cols=33 Identities=24% Similarity=0.334 Sum_probs=29.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~G--i~v~lvEr~~ 76 (712)
++|.|||+|-.|.++|..|++.| .+++++++..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 36999999999999999999999 6899999863
No 442
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=83.43 E-value=1 Score=45.38 Aligned_cols=35 Identities=34% Similarity=0.470 Sum_probs=31.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
..+|+|+|+|-+|.++|..|.+.|.+++|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998864
No 443
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=83.38 E-value=0.7 Score=47.78 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=30.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.-+|+|||+|++|+-+|..|++.| +|+++++..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 368999999999999999999999 799999884
No 444
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=83.38 E-value=1.1 Score=49.35 Aligned_cols=33 Identities=12% Similarity=0.306 Sum_probs=30.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
++|.|||+|-.|..+|..|+++|++|.+++|.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999865
No 445
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=83.35 E-value=0.99 Score=47.79 Aligned_cols=35 Identities=23% Similarity=0.273 Sum_probs=30.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~~ 77 (712)
.-.|+|+|+|++|++++..++..|. +|+++++.+.
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~ 229 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSK 229 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence 3579999999999999999999999 7999987653
No 446
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=83.34 E-value=0.92 Score=47.67 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=31.5
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.|+|+|||..|..++..+++.|++++++|.++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQA 36 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 5999999999999999999999999999987754
No 447
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=83.32 E-value=0.98 Score=45.83 Aligned_cols=34 Identities=26% Similarity=0.492 Sum_probs=31.3
Q ss_pred cCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGa-GpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
++|||.|| |-.|..++..|.++|++|+++-|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 46999999 99999999999999999999988764
No 448
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=83.23 E-value=7.5 Score=34.33 Aligned_cols=140 Identities=9% Similarity=0.027 Sum_probs=71.6
Q ss_pred CCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEcCCccchHHHHH----HHHhhhhcC-CceEEEEEcCCCCcchhhh
Q 005134 554 PGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIAPVEESYHLARA----ALKVAEDFK-VPTKVCVLWPAGTTNEVEF 628 (712)
Q Consensus 554 pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~~~~~~~~~~~a----a~~~~~~~g-~~~~~~~~~~~~~~~~~~~ 628 (712)
+|..+|.+-|.+.+|..+++-|+-|. .+||.+-. ..+..+.. ..++.+..+ -.+.++.|..+........
T Consensus 2 ~G~~~p~~~l~~~~g~~~~l~~~~gk----~vlv~F~~-~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~ 76 (151)
T 2f9s_A 2 EGSDAPNFVLEDTNGKRIELSDLKGK----GVFLNFWG-TWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHN 76 (151)
T ss_dssp CCEECCCCEEECTTCCEEEGGGGTTS----EEEEEEEC-TTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHH
T ss_pred CCCcCCcceeEcCCCCEEEHHHcCCC----EEEEEEEC-CCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHH
Confidence 68889999887666777888888542 56665532 11222221 223333332 2356666632211000000
Q ss_pred hhccccCCCCcccchhhhcccCCccchhhhhcccCCce-EEEcCCceEEEeeCCCCCCChHHHHHHHHHHhhCCCCCCCc
Q 005134 629 RSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMGA-ILVRPDDHIAWRSKSGVSGNPKLEMEMAFSAVLGIKPVNVE 707 (712)
Q Consensus 629 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ga-vLVRPDg~VaWr~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 707 (712)
-.....-.|..+.|. .....+.+++..--. +||-|||.|.++..+. ....+|.+.|+.++.....+.+
T Consensus 77 ~~~~~~~~~~~~~d~--------~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~---~~~~~l~~~l~~ll~~~~~~~~ 145 (151)
T 2f9s_A 77 FMKSYGVNFPVVLDT--------DRQVLDAYDVSPLPTTFLINPEGKVVKVVTGT---MTESMIHDYMNLIKPGETSGLE 145 (151)
T ss_dssp HHHHHTCCSCEEEET--------TSHHHHHTTCCSSCEEEEECTTSEEEEEEESC---CCHHHHHHHHHHHSCC------
T ss_pred HHHHcCCCceEEECC--------chHHHHhcCCCCCCeEEEECCCCcEEEEEeCC---CCHHHHHHHHHHHHhhhhcccc
Confidence 000001123223331 135556677766644 7888999999997643 2356799999999877666655
Q ss_pred cc
Q 005134 708 GT 709 (712)
Q Consensus 708 ~~ 709 (712)
+.
T Consensus 146 ~~ 147 (151)
T 2f9s_A 146 HH 147 (151)
T ss_dssp --
T ss_pred cc
Confidence 43
No 449
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.22 E-value=0.78 Score=50.41 Aligned_cols=34 Identities=32% Similarity=0.320 Sum_probs=31.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
...|+|||+|.+|..+|..|+..|.+|+++|+.+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999764
No 450
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=83.18 E-value=0.96 Score=45.63 Aligned_cols=32 Identities=34% Similarity=0.395 Sum_probs=29.3
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~ 76 (712)
+|.|||+|..|.++|..|++.|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 899998764
No 451
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=83.18 E-value=1.1 Score=46.76 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=30.5
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCC-CCEEEEcCCCC
Q 005134 43 VVPVLIVGA-GPVGLVLSILLTKLG-IKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGa-GpaGL~~A~~Lar~G-i~v~lvEr~~~ 77 (712)
...|+|.|| |..|..++..|.++| .+|+++.|...
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 82 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD 82 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 367999999 999999999999999 99999988754
No 452
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=83.13 E-value=1.3 Score=46.29 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=30.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..|.|||+|-.|.++|..|++.|++|+++++++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 579999999999999999999999999999875
No 453
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=83.06 E-value=1 Score=46.77 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=30.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~ 75 (712)
...+|.|||+|-+|.++|+.|+..|+ +++|+|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34789999999999999999999998 89999975
No 454
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=83.06 E-value=1.1 Score=49.29 Aligned_cols=36 Identities=11% Similarity=0.209 Sum_probs=32.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
+..+|.|||.|..|..+|..|+++|++|++++|.+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 347899999999999999999999999999998753
No 455
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=83.05 E-value=0.86 Score=45.42 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=31.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
...+|+|||+|-.|..+|..|++.|+ +++|+|...
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 45789999999999999999999999 678888765
No 456
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=83.04 E-value=1.2 Score=44.04 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=30.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC----CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI----KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi----~v~lvEr~~ 76 (712)
.+|.|||+|-.|.++|..|.+.|+ +|.+++|++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999864
No 457
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=82.90 E-value=0.62 Score=49.91 Aligned_cols=31 Identities=32% Similarity=0.356 Sum_probs=28.5
Q ss_pred cCEEEECCCHHHHHHHHHHHh-CCCCEEEEcC
Q 005134 44 VPVLIVGAGPVGLVLSILLTK-LGIKCSVLEK 74 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar-~Gi~v~lvEr 74 (712)
++|.|||+|-.|.++|..|++ .|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 479999999999999999998 4999999984
No 458
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=82.87 E-value=11 Score=34.39 Aligned_cols=130 Identities=10% Similarity=-0.024 Sum_probs=70.6
Q ss_pred CCCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEcCCccchHH----HHHHHHhhhhcCCceEEEEEcCCCCcchhhh
Q 005134 553 NPGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIAPVEESYHL----ARAALKVAEDFKVPTKVCVLWPAGTTNEVEF 628 (712)
Q Consensus 553 ~pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~~~~~~~~~----~~aa~~~~~~~g~~~~~~~~~~~~~~~~~~~ 628 (712)
.+|..+|.+-|.+.+|+.+|+-|+-|. .+||.+-.+..+.- .....++.+++ -.+.++.|..+.. +...
T Consensus 22 ~~g~~~P~f~l~~~~G~~~~l~~~~gk----~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~--~~~~ 94 (171)
T 2yzh_A 22 KVGDRAPEAVVVTKDLQEKIVGGAKDV----VQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLP--FAQK 94 (171)
T ss_dssp CTTSBCCCEEEEETTSCEEEESSCCSS----EEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH--HHHH
T ss_pred CCCCcCCceEEECCCCCEeeHHHhCCC----eEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCH--HHHH
Confidence 588899999888767788899898653 67776531111111 11223344444 4577777743311 1111
Q ss_pred hhccccC--CCCcccchhhhcccCCccchhhhhcccC----------CceEEEcCCceEEEeeCCC---CCCChHHHHHH
Q 005134 629 RSAAELA--PWKNYIDVEEVKRSSDSLSWWRICKMTD----------MGAILVRPDDHIAWRSKSG---VSGNPKLEMEM 693 (712)
Q Consensus 629 ~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~----------~gavLVRPDg~VaWr~~~~---~~~~~~~~l~~ 693 (712)
.-..... .|.-+.|.. .... +.+|+.. ...+||-|||.|.++.... ...+ .+++.+
T Consensus 95 ~~~~~~~~~~~~~l~D~~-------~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~-~~~ll~ 165 (171)
T 2yzh_A 95 RFCESFNIQNVTVASDFR-------YRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPN-YDEVVN 165 (171)
T ss_dssp HHHHHTTCCSSEEEECTT-------TCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCC-CHHHHH
T ss_pred HHHHHcCCCCeEEeecCc-------cCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCC-HHHHHH
Confidence 1111111 233334410 1355 6777652 4679999999999987421 1122 345666
Q ss_pred HHHHh
Q 005134 694 AFSAV 698 (712)
Q Consensus 694 ~~~~~ 698 (712)
.|+++
T Consensus 166 ~l~~l 170 (171)
T 2yzh_A 166 KVKEL 170 (171)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 66654
No 459
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=82.86 E-value=1.1 Score=46.10 Aligned_cols=32 Identities=25% Similarity=0.507 Sum_probs=29.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
+|.|||||-+|.++|+.|+..|+ ++.|+|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999999998 699999864
No 460
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=82.85 E-value=0.82 Score=46.59 Aligned_cols=34 Identities=21% Similarity=0.379 Sum_probs=31.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
.++|.|||+|-.|...|..|.+.|++|++++|++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3679999999999999999999999999998764
No 461
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=82.82 E-value=0.86 Score=48.88 Aligned_cols=34 Identities=26% Similarity=0.269 Sum_probs=31.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
...|+|||.|++|..+|..|...|.+|+++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4689999999999999999999999999999763
No 462
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=82.80 E-value=1 Score=46.99 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=30.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
-.|+|+|+|++|++++..++..|.+|+++++.+.
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~ 211 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEH 211 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999987654
No 463
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=82.66 E-value=1.2 Score=47.38 Aligned_cols=37 Identities=19% Similarity=0.228 Sum_probs=33.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
....++|+|||.+|..+|..++..|++|+|+|.++..
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 3468999999999999999999999999999988764
No 464
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=82.63 E-value=1.2 Score=48.82 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=31.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+.+|.|||+|-.|..+|..|+++|++|.+++|.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3689999999999999999999999999998764
No 465
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=82.60 E-value=7.4 Score=37.32 Aligned_cols=143 Identities=13% Similarity=0.084 Sum_probs=78.2
Q ss_pred CCCCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEcCCccchHH----HHHHHHhhhhcC-CceEEEEEcCCCC----
Q 005134 552 ANPGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIAPVEESYHL----ARAALKVAEDFK-VPTKVCVLWPAGT---- 622 (712)
Q Consensus 552 ~~pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~~~~~~~~~----~~aa~~~~~~~g-~~~~~~~~~~~~~---- 622 (712)
-.+|..+|.+-|.+.+|+.+++-|+-|. ..+||.+-.. .+.. .....++.++.. -.+.++.|..+..
T Consensus 32 l~~G~~aP~f~l~~~~G~~v~l~~~~gk---~~vll~F~a~-~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~ 107 (218)
T 3u5r_E 32 ITLGTRAADFVLPDAGGNLFTLAEFKDS---PALLVAFISN-RCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFP 107 (218)
T ss_dssp CCTTCBCCCCCEECTTCCEECGGGGTTC---SEEEEEECCS-SCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCG
T ss_pred CCCCCcCCCcEeECCCCCEEeHHHhCCC---CeEEEEEECC-CCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccc
Confidence 4689999999998767888899898774 1366665431 1111 122334444432 2377777733210
Q ss_pred -cchhhhhhc-cc-cCCCCcccchhhhcccCCccchhhhhcccCC-ceEEEcCCceEEEeeCCCC------CCChHHHHH
Q 005134 623 -TNEVEFRSA-AE-LAPWKNYIDVEEVKRSSDSLSWWRICKMTDM-GAILVRPDDHIAWRSKSGV------SGNPKLEME 692 (712)
Q Consensus 623 -~~~~~~~~~-~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-gavLVRPDg~VaWr~~~~~------~~~~~~~l~ 692 (712)
+........ .. .-.|..+.|. .....+.+++..- ..+||-+||.|.||+.-.. ..-...+|+
T Consensus 108 ~d~~~~~~~~~~~~~~~~~~l~D~--------~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~ 179 (218)
T 3u5r_E 108 EETLERVGAEVKAYGYGFPYLKDA--------SQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLR 179 (218)
T ss_dssp GGSHHHHHHHHHHHTCCSCEEECT--------TCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHH
T ss_pred cCCHHHHHHHHHHhCCCccEEECC--------ccHHHHHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHH
Confidence 000000000 00 0122222231 1355566776654 5688899999999974210 011246799
Q ss_pred HHHHHhhCCCCCCC
Q 005134 693 MAFSAVLGIKPVNV 706 (712)
Q Consensus 693 ~~~~~~~~~~~~~~ 706 (712)
++|+.+|.-.+...
T Consensus 180 ~~i~~ll~~~~~~~ 193 (218)
T 3u5r_E 180 AAVDAVLKGKDVGT 193 (218)
T ss_dssp HHHHHHHTTCCCCS
T ss_pred HHHHHHHcCCCCCc
Confidence 99999986655443
No 466
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=82.29 E-value=1.1 Score=45.40 Aligned_cols=71 Identities=20% Similarity=0.180 Sum_probs=50.9
Q ss_pred ecccceeeeccCcCcCcccccc---cccCCCCccCC------------------------CCcccCEEEECCCHHHHHHH
Q 005134 7 TRGLNCFSRIKTFPYPYGYTQC---RALSDSKTIVS------------------------NEAVVPVLIVGAGPVGLVLS 59 (712)
Q Consensus 7 ~~~~~~~~~~~~~~~p~~~~~~---~~~s~~~~~~~------------------------~~~~~~VlIVGaGpaGL~~A 59 (712)
.+|+|.+---|..++|+++.-. ..++..+++.. +.....|+|+|+|-+|.++|
T Consensus 54 ~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAVNTv~~~~g~l~G~NTD~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia 133 (277)
T 3don_A 54 IDGFNVTIPHKERIIPYLDDINEQAKSVGAVNTVLVKDGKWIGYNTDGIGYVNGLKQIYEGIEDAYILILGAGGASKGIA 133 (277)
T ss_dssp CSEEEECTTCTTTTGGGCSEECHHHHHHTCCCEEEEETTEEEEECCHHHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHH
T ss_pred CCEEEECcCCHHHHHHHhhhCCHHHHHhCceeEEEecCCEEEEECChHHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHH
Confidence 4678887777888888876311 22333332210 12345799999999999999
Q ss_pred HHHHhCCC-CEEEEcCCCC
Q 005134 60 ILLTKLGI-KCSVLEKNKA 77 (712)
Q Consensus 60 ~~Lar~Gi-~v~lvEr~~~ 77 (712)
..|.+.|+ +++|+.|...
T Consensus 134 ~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 134 NELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp HHHHTTCCSCCEEECSCGG
T ss_pred HHHHHCCCCEEEEEeCCHH
Confidence 99999999 8999998864
No 467
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=82.22 E-value=1.4 Score=45.96 Aligned_cols=39 Identities=28% Similarity=0.353 Sum_probs=33.2
Q ss_pred CCCcccCEEEECC-CHHHHHHHHHHHh--CCCCEEEEcCCCC
Q 005134 39 SNEAVVPVLIVGA-GPVGLVLSILLTK--LGIKCSVLEKNKA 77 (712)
Q Consensus 39 ~~~~~~~VlIVGa-GpaGL~~A~~Lar--~Gi~v~lvEr~~~ 77 (712)
|.+....|+|.|| |-.|..++..|.+ .|++|+++.|...
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 3344568999976 9999999999999 9999999998654
No 468
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=82.10 E-value=1.1 Score=46.17 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=31.3
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGa-GpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.+.|||.|| |-.|..++..|.++|.+|+++.|...
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFAT 55 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 357999998 99999999999999999999998643
No 469
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=82.06 E-value=1.1 Score=46.60 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=30.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~ 75 (712)
.+.+|.|||||-+|.++|+.|...++ ++.|+|..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34789999999999999999999887 78888864
No 470
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=82.00 E-value=4.5 Score=37.00 Aligned_cols=35 Identities=11% Similarity=0.246 Sum_probs=26.2
Q ss_pred CCCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEc
Q 005134 553 NPGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIA 589 (712)
Q Consensus 553 ~pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~ 589 (712)
..|..+|-+-|.+.+|+.+|+-|+.+.|+ .++|.+
T Consensus 6 ~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk--~vvl~f 40 (164)
T 4gqc_A 6 ELGEKAPDFTLPNQDFEPVNLYEVLKRGR--PAVLIF 40 (164)
T ss_dssp CTTSBCCCCEEEBTTSCEEEHHHHHHTSS--CEEEEE
T ss_pred cCCCCCcCcEeECCCCCEEEHHHHhcCCC--EEEEEE
Confidence 47899999999876778889999876554 455554
No 471
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=81.92 E-value=1.1 Score=45.42 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=28.8
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGa-GpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..-|||.|| |-.|..+|..|+++|.+|+++.|+.
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 62 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGVTVGALGRTR 62 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 345888886 6789999999999999999998753
No 472
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=81.86 E-value=10 Score=41.66 Aligned_cols=35 Identities=14% Similarity=0.268 Sum_probs=30.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~~~ 78 (712)
.+|+|||+|-+|.-.+..|+++ +.+|+++=|.+..
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 3699999999999999999876 7799999998754
No 473
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=81.84 E-value=1 Score=46.02 Aligned_cols=33 Identities=18% Similarity=0.147 Sum_probs=29.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi--~v~lvEr~~ 76 (712)
++|.|||+|-+|.++|+.|..+++ ++.|||...
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 479999999999999999999886 688998753
No 474
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=81.76 E-value=1.2 Score=45.42 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=31.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
....|+|||+|..|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34679999999999999999999999999999874
No 475
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.68 E-value=1.3 Score=48.60 Aligned_cols=33 Identities=27% Similarity=0.487 Sum_probs=30.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
++|.|||+|-.|..+|..|+++|++|.+++|.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999764
No 476
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=81.64 E-value=1.4 Score=45.72 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=31.7
Q ss_pred CcccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 41 EAVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 41 ~~~~~VlIVGa-GpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
.....|||.|| |-.|..++..|.++|++|+++.|.+..
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG 55 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 34568999999 999999999999999999999998653
No 477
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=81.62 E-value=1.5 Score=47.32 Aligned_cols=36 Identities=22% Similarity=0.404 Sum_probs=32.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
....|+|+|+|..|..++..+++.|++|++++..+.
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 446899999999999999999999999999986543
No 478
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=81.52 E-value=1.2 Score=44.28 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=30.1
Q ss_pred ccCEEEECC-C-HHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGA-G-PVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGa-G-paGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
...|||.|| | -.|..+|..|+++|.+|+++.|+.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 456999999 7 599999999999999999998864
No 479
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=81.37 E-value=1.4 Score=46.71 Aligned_cols=35 Identities=26% Similarity=0.502 Sum_probs=31.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
...|+|+|+|..|..++..+.+.|++|++++..+.
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 35799999999999999999999999999997654
No 480
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=81.27 E-value=1 Score=47.32 Aligned_cols=35 Identities=26% Similarity=0.552 Sum_probs=31.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
...+|+|||+|-.|..+|..|++.|+ +++|+|...
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 35789999999999999999999999 788898765
No 481
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=81.24 E-value=1.2 Score=44.95 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=31.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
..+|+|||+|-+|.++|..|.+.|+++++++|..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4679999999999999999999999999999874
No 482
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=81.23 E-value=1.1 Score=47.19 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=30.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
-.|+|+|+|++|+.++..++..|.+|+.+++.+.
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~ 214 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSSR 214 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4799999999999999999999999999987654
No 483
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=81.12 E-value=1.3 Score=45.31 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=31.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 42 ~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
....|+|||+|..|..+|..|...|.+|++++|..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 44679999999999999999999999999999874
No 484
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=80.92 E-value=1 Score=48.69 Aligned_cols=34 Identities=29% Similarity=0.492 Sum_probs=31.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.+.-|||.|-+|+.+|..|+++|++|+++++++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 5678999999999999999999999999998853
No 485
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=80.72 E-value=1.6 Score=43.57 Aligned_cols=70 Identities=19% Similarity=0.242 Sum_probs=47.6
Q ss_pred ecccceeeeccCcCcCcccccc--cccCCCCccC----C--------------CCcccCEEEECCCHHHHHHHHHHHhCC
Q 005134 7 TRGLNCFSRIKTFPYPYGYTQC--RALSDSKTIV----S--------------NEAVVPVLIVGAGPVGLVLSILLTKLG 66 (712)
Q Consensus 7 ~~~~~~~~~~~~~~~p~~~~~~--~~~s~~~~~~----~--------------~~~~~~VlIVGaGpaGL~~A~~Lar~G 66 (712)
.+|+|.+---|..++|+++.++ ..++..+++. . .... .|+|+|+|-+|.+++..|.+.|
T Consensus 53 ~~G~nVT~P~K~~v~~~~d~~~~A~~iGAvNTi~~~~G~NTD~~G~~~~l~~~~~~~-~vliiGaGg~a~ai~~~L~~~G 131 (253)
T 3u62_A 53 YDGFNATIPHKERVMRYVEPSEDAQRIKAVNCVFRGKGYNTDWVGVVKSLEGVEVKE-PVVVVGAGGAARAVIYALLQMG 131 (253)
T ss_dssp CSEEEECTTCTTGGGGGSEECHHHHHHTCCCEEETTEEECCHHHHHHHHTTTCCCCS-SEEEECCSHHHHHHHHHHHHTT
T ss_pred CCceeecCChHHHHHHHhCCCHHHHHcCcceEeecCEEEcchHHHHHHHHHhcCCCC-eEEEECcHHHHHHHHHHHHHcC
Confidence 3566666666666677666511 1233333221 0 1234 8999999999999999999999
Q ss_pred C-CEEEEcCCCC
Q 005134 67 I-KCSVLEKNKA 77 (712)
Q Consensus 67 i-~v~lvEr~~~ 77 (712)
+ +++|+.|...
T Consensus 132 ~~~I~v~nR~~~ 143 (253)
T 3u62_A 132 VKDIWVVNRTIE 143 (253)
T ss_dssp CCCEEEEESCHH
T ss_pred CCEEEEEeCCHH
Confidence 9 9999998753
No 486
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=80.70 E-value=18 Score=32.12 Aligned_cols=143 Identities=10% Similarity=0.064 Sum_probs=70.5
Q ss_pred CCCCCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEcCCccchHHHH----HHHHhhhhcC-CceEEEEEcCCCCcch
Q 005134 551 SANPGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIAPVEESYHLAR----AALKVAEDFK-VPTKVCVLWPAGTTNE 625 (712)
Q Consensus 551 ~~~pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~~~~~~~~~~~----aa~~~~~~~g-~~~~~~~~~~~~~~~~ 625 (712)
...+|..+|.+-+.+.+|+.+++-++-|. .+||.+-. ..+..+. ...++.++.+ -.+.++.|..+.+...
T Consensus 7 ~~~~g~~~p~~~l~~~~g~~~~l~~~~gk----~vlv~f~~-~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~ 81 (165)
T 3or5_A 7 ADARPTPAPSFSGVTVDGKPFSSASLKGK----AYIVNFFA-TWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPN 81 (165)
T ss_dssp CCCCCCBCCCCEEECTTSCEEEGGGGTTC----EEEEEEEC-TTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHH
T ss_pred hhcCCCCCCCceeeCCCCCEechhHcCCC----EEEEEEEc-CcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHH
Confidence 35689999999888767777888887542 56665542 1122221 2223333433 2367777732211100
Q ss_pred hhhhhccccCCCCcccchhhhcccCCccchhhhh------cccCC-ceEEEcCCceEEEeeCCCCCCChHHHHHHHHHHh
Q 005134 626 VEFRSAAELAPWKNYIDVEEVKRSSDSLSWWRIC------KMTDM-GAILVRPDDHIAWRSKSGVSGNPKLEMEMAFSAV 698 (712)
Q Consensus 626 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~------~~~~~-gavLVRPDg~VaWr~~~~~~~~~~~~l~~~~~~~ 698 (712)
...--....-.|..+.|. ....+.+ ++..- ..+||-|||.|.++..+. ....+|.+.|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~---~~~~~l~~~l~~~ 149 (165)
T 3or5_A 82 VKNYMKTQGIIYPVMMAT---------PELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGP---RSKADFDRIVKMA 149 (165)
T ss_dssp HHHHHHHHTCCSCEEECC---------HHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSC---CCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCceEecC---------HHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCC---CCHHHHHHHHHHH
Confidence 000000001122222221 1222223 34333 458889999999997643 2457799999999
Q ss_pred hCCCCCCCcccC
Q 005134 699 LGIKPVNVEGTT 710 (712)
Q Consensus 699 ~~~~~~~~~~~~ 710 (712)
|........+++
T Consensus 150 l~~~~~~~~~~~ 161 (165)
T 3or5_A 150 LGAKAATKEGHH 161 (165)
T ss_dssp HC----------
T ss_pred Hhhhcccccccc
Confidence 987655555443
No 487
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=80.60 E-value=0.99 Score=46.61 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=29.4
Q ss_pred cCEEEECC-CHHHHHHHHHHHhCC--CCEEEEcCCC
Q 005134 44 VPVLIVGA-GPVGLVLSILLTKLG--IKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGa-GpaGL~~A~~Lar~G--i~v~lvEr~~ 76 (712)
++|+|||| |-+|.++|..|+..| .++.++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 36999998 999999999999998 5899999764
No 488
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=80.53 E-value=1.3 Score=51.23 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~~ 77 (712)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4699999999999999999999999999998763
No 489
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=80.42 E-value=9.2 Score=34.55 Aligned_cols=112 Identities=11% Similarity=-0.068 Sum_probs=64.8
Q ss_pred CCCCCCCCcceeecCCCCcceeeeCCCCCcceEEEEEcCCccchHHHH-------HHHHhhhhcCCceEEEEEcCCCCcc
Q 005134 552 ANPGSRLPHMNVRVLSTEIISTLDLVSGDKVEFLLIIAPVEESYHLAR-------AALKVAEDFKVPTKVCVLWPAGTTN 624 (712)
Q Consensus 552 ~~pG~R~PH~~l~~~~~~~~St~Dl~~~~~~~f~Ll~~~~~~~~~~~~-------aa~~~~~~~g~~~~~~~~~~~~~~~ 624 (712)
..+|..+|.+-|.+.+|+.+++-|+-|. .+||.+-.+ .|+. ...++.++. -.+.++.|..+..
T Consensus 16 ~~~G~~~P~f~l~~~~G~~v~l~~~~gk----~vvl~F~~~---~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~-- 85 (163)
T 1psq_A 16 LQVGDKALDFSLTTTDLSKKSLADFDGK----KKVLSVVPS---IDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLP-- 85 (163)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTS----EEEEEECSC---TTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH--
T ss_pred CCCCCCCCCEEEEcCCCcEeeHHHhCCC----EEEEEEECC---CCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCH--
Confidence 4689999999998767788899898653 677766321 1421 223344444 4567777743311
Q ss_pred hhhh--hhccccCCCCcccchhhhcccCCccchhhhhcccC-------CceEEEcCCceEEEeeC
Q 005134 625 EVEF--RSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTD-------MGAILVRPDDHIAWRSK 680 (712)
Q Consensus 625 ~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-------~gavLVRPDg~VaWr~~ 680 (712)
+... ........|.-+.|.. .+...+.+|+.. ...+||-|||.|.++..
T Consensus 86 ~~~~~~~~~~~~~~~~~l~D~~-------~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~ 143 (163)
T 1psq_A 86 FAQKRWCGAEGLDNAIMLSDYF-------DHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEY 143 (163)
T ss_dssp HHHHHHHHHHTCTTSEEEECTT-------TCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEE
T ss_pred HHHHHHHHhcCCCCcEEecCCc-------hhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEe
Confidence 1111 1111111333233310 145667777763 47799999999999875
No 490
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=80.25 E-value=1.1 Score=48.00 Aligned_cols=34 Identities=29% Similarity=0.423 Sum_probs=30.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 43 ~~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
...|+|||+|..|..+|..|...|. +|++++|..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4579999999999999999999999 899998763
No 491
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=80.16 E-value=1.6 Score=45.44 Aligned_cols=33 Identities=36% Similarity=0.484 Sum_probs=29.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
-.|+|+|+|++|++++..++..|. +|+++++.+
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~ 202 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSD 202 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 479999999999999999999999 999988653
No 492
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=80.04 E-value=1.7 Score=43.33 Aligned_cols=32 Identities=28% Similarity=0.576 Sum_probs=30.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 45 ~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
+|+|||+|-+|.+.|..|.+.|+++++++|..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999999864
No 493
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=79.82 E-value=1 Score=46.66 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=29.9
Q ss_pred CcccCEEEECC-CHHHHHHHHHHHhCC--CCEEEEcCCC
Q 005134 41 EAVVPVLIVGA-GPVGLVLSILLTKLG--IKCSVLEKNK 76 (712)
Q Consensus 41 ~~~~~VlIVGa-GpaGL~~A~~Lar~G--i~v~lvEr~~ 76 (712)
+..+.|+|.|| |..|..++..|.++| ++|+.+.+..
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~ 60 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALT 60 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccc
Confidence 33467999999 999999999999999 7788887765
No 494
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=79.71 E-value=1.2 Score=46.97 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=29.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
-.|+|+|+|++|++++..++..|.+|+++++.+
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~ 228 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSE 228 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999998888754
No 495
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=79.46 E-value=1.4 Score=47.24 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=31.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 41 ~~~~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
|....|+|+|+|..|..++..+++.|++|++++ .+
T Consensus 22 m~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 22 WNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 345789999999999999999999999999999 54
No 496
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=79.44 E-value=1.3 Score=46.71 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=29.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
-.|+|+|+|++|++++..++..|.+|+++++.+
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~ 221 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSP 221 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999988764
No 497
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=79.42 E-value=1.3 Score=46.37 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=29.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi~v~lvEr~~ 76 (712)
-.|+|+|+|++|+.++..++..|.+|+++++.+
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~ 214 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMGHHVTVISSSN 214 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCh
Confidence 469999999999999999999999999998764
No 498
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=79.41 E-value=1.2 Score=42.85 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=31.8
Q ss_pred cCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 005134 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (712)
Q Consensus 44 ~~VlIVGa-GpaGL~~A~~Lar~Gi~v~lvEr~~~~ 78 (712)
..|+|.|| |-.|..++..|.++|++|+++.|++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK 40 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc
Confidence 46999996 999999999999999999999998654
No 499
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=79.29 E-value=1.4 Score=44.64 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=29.2
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~--Gi~v~lvEr~~ 76 (712)
.+|.|||+|-.|.++|..|.+. |++|.++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 5799999999999999999988 67899888763
No 500
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=79.11 E-value=1.9 Score=44.90 Aligned_cols=33 Identities=36% Similarity=0.612 Sum_probs=29.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 005134 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (712)
Q Consensus 44 ~~VlIVGaGpaGL~~A~~Lar~Gi-~v~lvEr~~ 76 (712)
-.|+|+|||++|+.++..++..|. +|+.+++.+
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~ 199 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRASGAGPILVSDPNP 199 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 579999999999999999999999 999998753
Done!